mRNA_P-wetherbeei_contig19503.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19503.2.1
Unique NamemRNA_P-wetherbeei_contig19503.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19503.2.1 vs. uniprot
Match: A0A4R2L5A5_9GAMM (DNA mismatch repair protein MutS n=1 Tax=Plasticicumulans lactativorans TaxID=1133106 RepID=A0A4R2L5A5_9GAMM)

HSP 1 Score: 439 bits (1130), Expect = 8.810e-145
Identity = 235/363 (64.74%), Postives = 285/363 (78.51%), Query Frame = 1
Query:    4 RRQTLKGVERYITPELKGFETHILTAADRALRRERELYESLLIALLPEVRALQDTSAALAELDVLASFAERAESLQLCAPEFCSEPRLSISGGRHPLVEQFQDTPFVANDLELDDARRLLLITGPNMGGKSTYMRQTALITLLAHIGSFVPARAALIGPIDAIYSRIGAGDNLAGGQSTFMVEMSETANILHHATAASLVIVDEIGRGTSTYDGMSLAWAAAEHLAQRNRAFTLFATHYFELTALADEVPTVANVRLDAVEHGEDVVFMHSVSAGPASRSFGIAVARRAGVPATVIARARALLDTLER---RHPQQNQHEAPQLPLF---DRPHPALAALSELDPDRLTPREALDALYRLRAL 1074
            RRQTLKG ERYITPELK FE  +L+A +RAL RE+ LY+ LL AL+  +  LQ ++AALAELDVLA+FAERAESL L  PE   EP LSI GGRH +VEQ  D PFV NDL LD+ RR+L+ITGPNMGGKSTYMRQTALI +LA+IGSFVPAR A++GP+D I++RIGA D+LA G+STFMVEM+ETA+ILH+A+A SLV++DEIGRGTST+DG++LAWA AEHLA ++RAFTLFATHYFELT L DE PT+ANV LDA+EHGE +VF+H++  GPA RS+G+ VA  AG+P  V+  AR  L  LER   R P      APQL L      PH  L AL+ ++PD LTPR+AL+ALYRL+AL
Sbjct:  490 RRQTLKGAERYITPELKAFEDKVLSARERALAREKALYDELLDALIGVLPGLQASAAALAELDVLATFAERAESLALSPPELVDEPGLSIEGGRHLVVEQVIDAPFVPNDLALDERRRMLVITGPNMGGKSTYMRQTALIVVLAYIGSFVPARRAVLGPVDRIFTRIGAADDLASGRSTFMVEMTETADILHNASARSLVLMDEIGRGTSTFDGLALAWACAEHLAAQSRAFTLFATHYFELTRLPDEHPTIANVHLDAIEHGERIVFLHALQDGPADRSYGLQVAALAGIPKRVVQAARRRLRELERSAARRPALPPEPAPQLALAFAAPDPHAVLDALAAIEPDALTPRQALEALYRLKAL 852          
BLAST of mRNA_P-wetherbeei_contig19503.2.1 vs. uniprot
Match: A0A431HZG1_9GAMM (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A431HZG1_9GAMM)

HSP 1 Score: 426 bits (1096), Expect = 1.850e-144
Identity = 233/362 (64.36%), Postives = 276/362 (76.24%), Query Frame = 1
Query:    4 RRQTLKGVERYITPELKGFETHILTAADRALRRERELYESLLIALLPEVRALQDTSAALAELDVLASFAERAESLQLCAPEFCSEPRLSISGGRHPLVEQFQDTPFVANDLELDDARRLLLITGPNMGGKSTYMRQTALITLLAHIGSFVPARAALIGPIDAIYSRIGAGDNLAGGQSTFMVEMSETANILHHATAASLVIVDEIGRGTSTYDGMSLAWAAAEHLAQRNRAFTLFATHYFELTALADEVPTVANVRLDAVEHGEDVVFMHSVSAGPASRSFGIAVARRAGVPATVIARARALLDTLER---RHPQQNQHEAPQLPLF-DRPHPALAALSELDPDRLTPREALDALYRLRALI 1077
            RRQTLKGVERYITPELK FE  +L+A +RAL RE+ LYE LL AL+  +  LQ  +AALAELD L + AERA +L L  PE   EP + I  GRHP+VEQ  D PFV NDL  DD+RRLL+ITGPNMGGKSTYMRQTALI LLAHIGS+VPA++A IGP+D I++RIGA D+LA G+STFMVEM+ETANILH+ATA SLV++DEIGRGTST+DG+SLAWA A  LAQ   A TLFATHYFELT L DE   +ANV LDAVEHGE +VF+H++  GPASRS+G+AVA  AG+P  V+A AR  L  LER   R  Q      PQLPLF   P+  + ALS +DPD L+PREAL ALY L++L+
Sbjct:  121 RRQTLKGVERYITPELKAFEDKVLSARERALAREKALYEGLLDALIAGLGPLQRLAAALAELDALTTLAERAGALDLACPELTDEPGIDIVAGRHPVVEQVSDAPFVPNDLRFDDSRRLLVITGPNMGGKSTYMRQTALIVLLAHIGSYVPAKSARIGPVDRIFTRIGAADDLASGRSTFMVEMTETANILHNATAGSLVLMDEIGRGTSTFDGLSLAWACAHRLAQIG-ACTLFATHYFELTRLPDEHAGIANVHLDAVEHGEGIVFLHALQDGPASRSYGLAVAALAGMPKPVVAAARRKLKELERVPARRAQLPAEPDPQLPLFAPEPNAVVEALSGIDPDSLSPREALAALYHLKSLL 481          
BLAST of mRNA_P-wetherbeei_contig19503.2.1 vs. uniprot
Match: A0A0S2TF59_9GAMM (DNA mismatch repair protein MutS n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A0S2TF59_9GAMM)

HSP 1 Score: 436 bits (1120), Expect = 2.760e-143
Identity = 233/362 (64.36%), Postives = 282/362 (77.90%), Query Frame = 1
Query:    4 RRQTLKGVERYITPELKGFETHILTAADRALRRERELYESLLIALLPEVRALQDTSAALAELDVLASFAERAESLQLCAPEFCSEPRLSISGGRHPLVEQFQDTPFVANDLELDDARRLLLITGPNMGGKSTYMRQTALITLLAHIGSFVPARAALIGPIDAIYSRIGAGDNLAGGQSTFMVEMSETANILHHATAASLVIVDEIGRGTSTYDGMSLAWAAAEHLAQRNRAFTLFATHYFELTALADEVPTVANVRLDAVEHGEDVVFMHSVSAGPASRSFGIAVARRAGVPATVIARARALLDTLERRHPQQ---NQHEAPQLPLFD-RPHPALAALSELDPDRLTPREALDALYRLRALI 1077
            RRQTLKGVERYITPELKGFE  +L+A +RAL RE+ LY+ LL  L+P + ALQ ++AALAELDVLA+ AERA+SL L  PE   +P L I GGRHP+VEQ  + PFV ND  LD  RR+L+ITGPNMGGKSTYMRQTALITLLAHIGS+VPA+ A+IGPID I++RIGA D+LAGG+STFMVEM+ETANILH+A+A SL+++DEIGRGTST+DG+SLAWA AE+LA +  AFTLFATHYFELT L +    V NV LDAVEH + +VFMH+V  GPA++S+G+ VA  AGVP  VI  A+A L  LE         N    PQL LF+ RPHP    L+E+DPD LTPR+AL+ALY+L+ LI
Sbjct:  493 RRQTLKGVERYITPELKGFEDKVLSAKERALAREKALYDQLLEDLIPHLGALQTSAAALAELDVLANLAERADSLNLSKPELIEQPCLEIHGGRHPVVEQNLEAPFVPNDTHLDPQRRMLIITGPNMGGKSTYMRQTALITLLAHIGSYVPAQRAVIGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILHNASAQSLILMDEIGRGTSTFDGLSLAWACAEYLADKVGAFTLFATHYFELTTLPEHHDNVVNVHLDAVEHDDSIVFMHAVKEGPANQSYGLQVAALAGVPRPVIEAAKARLMQLEDSTVNTAPVNARPEPQLGLFETRPHPVADKLTEIDPDNLTPRQALEALYQLKQLI 854          
BLAST of mRNA_P-wetherbeei_contig19503.2.1 vs. uniprot
Match: A0A2H6JDL3_9BACT (DNA mismatch repair protein MutS n=2 Tax=Bacteria TaxID=2 RepID=A0A2H6JDL3_9BACT)

HSP 1 Score: 435 bits (1119), Expect = 4.440e-143
Identity = 233/362 (64.36%), Postives = 284/362 (78.45%), Query Frame = 1
Query:    4 RRQTLKGVERYITPELKGFETHILTAADRALRRERELYESLLIALLPEVRALQDTSAALAELDVLASFAERAESLQLCAPEFCSEPRLSISGGRHPLVEQFQDTPFVANDLELDDARRLLLITGPNMGGKSTYMRQTALITLLAHIGSFVPARAALIGPIDAIYSRIGAGDNLAGGQSTFMVEMSETANILHHATAASLVIVDEIGRGTSTYDGMSLAWAAAEHLAQRNRAFTLFATHYFELTALADEVPTVANVRLDAVEHGEDVVFMHSVSAGPASRSFGIAVARRAGVPATVIARARALLDTLERRHPQQNQHEAPQLPLFDRP------HPALAALSELDPDRLTPREALDALYRLRA 1071
            RRQTLKG ERYITPELK FE  +L+A +RAL RE+ LYE+LL  LL ++ ALQ+ +AALAELDVLA  AERA++L   APE    P + I GGRHP+VE+  D PFVAND++LD++RR+L+ITGPNMGGKSTYMRQ+ALI LLAHIG++VPAR A+IGP+D I++RIGA D+LAGG+STFMVEM+ETANILH+AT  SLV++DEIGRGTST+DG++LAWA A  LA R RA+TLFATHYFELTALA E+  + NV L+AVEHGE +VF+H+V  GPA RS+G+ VA+ AGVP  VI +AR  L+ LERR P      APQLPLFD        HPAL  L  LDPD L+PR AL+ LY L+A
Sbjct:  494 RRQTLKGAERYITPELKAFEEKVLSARERALAREKGLYEALLERLLDDLPALQECAAALAELDVLADLAERADTLDYRAPELTPTPGIRIEGGRHPVVERVIDEPFVANDVDLDESRRMLIITGPNMGGKSTYMRQSALIVLLAHIGAYVPARRAVIGPVDRIFTRIGAADDLAGGRSTFMVEMTETANILHNATDQSLVLMDEIGRGTSTFDGLALAWACAVELAARVRAYTLFATHYFELTALAGEIAGIDNVHLEAVEHGEAIVFLHAVREGPADRSYGLHVAQLAGVPRPVIEQARERLEELERRTPAPAG--APQLPLFDAQTPPAPQHPALERLRALDPDSLSPRAALELLYELKA 853          
BLAST of mRNA_P-wetherbeei_contig19503.2.1 vs. uniprot
Match: A0A831W8H8_9GAMM (DNA mismatch repair protein MutS n=1 Tax=Sedimenticola thiotaurini TaxID=1543721 RepID=A0A831W8H8_9GAMM)

HSP 1 Score: 425 bits (1092), Expect = 4.590e-143
Identity = 228/362 (62.98%), Postives = 274/362 (75.69%), Query Frame = 1
Query:    4 RRQTLKGVERYITPELKGFETHILTAADRALRRERELYESLLIALLPEVRALQDTSAALAELDVLASFAERAESLQLCAPEFCSEPRLSISGGRHPLVEQFQDTPFVANDLELDDARRLLLITGPNMGGKSTYMRQTALITLLAHIGSFVPARAALIGPIDAIYSRIGAGDNLAGGQSTFMVEMSETANILHHATAASLVIVDEIGRGTSTYDGMSLAWAAAEHLAQRNRAFTLFATHYFELTALADEVPTVANVRLDAVEHGEDVVFMHSVSAGPASRSFGIAVARRAGVPATVIARARALLDTLERRHPQQNQHEAPQLPLFDRPHPALA-----ALSELDPDRLTPREALDALYRLRAL 1074
            RRQTLKG ER+ITPELK FE  +L+A +RAL RE+ LYE LL  L   +  LQ  +AALAELDVLA+ A+RAE L+L  PE   EP + I  GRHP+VEQ  + PFVAND+  D+ RR+L+ITGPNMGGKST+MRQTALI LLA  GSFVPA +A IGP+D I+SRIGA D+LAGG+STFMVEM ETANILH+A+  SLV++DEIGRGTST+DG+SLAWA    LA R RAFTLFATHYFELT L DE P +ANV LDAVEHG+ +VF+H+V  GPA++S+G+ VA  AGVPATVI RAR  L  LE+      + EA QL LF  P  A       AL+E+DPD LTPR+AL+ALYRL+ +
Sbjct:  173 RRQTLKGAERFITPELKRFEEQVLSAKERALAREKALYEELLERLQERIAPLQQCAAALAELDVLANLAQRAERLRLNPPELVEEPGIDIREGRHPVVEQVSEAPFVANDVHFDEGRRILVITGPNMGGKSTFMRQTALIVLLACAGSFVPASSARIGPVDRIFSRIGASDDLAGGRSTFMVEMEETANILHNASDRSLVLMDEIGRGTSTFDGLSLAWACGVELATRIRAFTLFATHYFELTTLPDEYPGIANVHLDAVEHGDGIVFLHAVREGPANQSYGLQVAALAGVPATVIDRARERLRELEQAAQHHRELEADQLSLFTEPEEAAGSAVEQALAEIDPDGLTPRQALEALYRLKEI 534          
BLAST of mRNA_P-wetherbeei_contig19503.2.1 vs. uniprot
Match: A0A351UZ99_9GAMM (DNA mismatch repair protein MutS (Fragment) n=1 Tax=Methylococcaceae bacterium TaxID=1933926 RepID=A0A351UZ99_9GAMM)

HSP 1 Score: 420 bits (1079), Expect = 8.250e-143
Identity = 220/362 (60.77%), Postives = 278/362 (76.80%), Query Frame = 1
Query:    4 RRQTLKGVERYITPELKGFETHILTAADRALRRERELYESLLIALLPEVRALQDTSAALAELDVLASFAERAESLQLCAPEFCSEPRLSISGGRHPLVEQFQDTPFVANDLELDDARRLLLITGPNMGGKSTYMRQTALITLLAHIGSFVPARAALIGPIDAIYSRIGAGDNLAGGQSTFMVEMSETANILHHATAASLVIVDEIGRGTSTYDGMSLAWAAAEHLAQRNRAFTLFATHYFELTALADEVPTVANVRLDAVEHGEDVVFMHSVSAGPASRSFGIAVARRAGVPATVIARARALLDTLERRHPQQNQHEA--PQLPLF--DRPHPALAALSELDPDRLTPREALDALYRLRALI 1077
            R+QTLKGVERYIT ELK FE  +L+A +++L  E+ LY+ LL  L   +  LQ  +  LAELDVLA+FAER+E+L L  P+   +P + I GGRHP+VEQ  D PFVANDL+L   RR+L+ITGPNMGGKSTYMRQ ALI L+AHIG +VPA+AA IGP+D I++RIGA D+LAGG+STFMVEMSETANILH+AT  SL+++DEIGRGTST+DG+SLAWA A+HLA+  +A+TLFATHYFELT LADE   + NV LDA+E+G+ +VF+H+V  GPAS+S+G+ VA  AGVPATVI +A+  L  LE     QNQ E+   QL LF     HPA+  + ELDPD L+PR+ALD LYRL+ ++
Sbjct:   56 RKQTLKGVERYITEELKTFEDKVLSAKEKSLAFEKLLYDQLLNTLGESLTDLQQCAQGLAELDVLAAFAERSETLNLTRPQLTDKPGIDIEGGRHPVVEQVSDIPFVANDLKLSPQRRMLIITGPNMGGKSTYMRQAALIVLIAHIGCYVPAKAATIGPVDKIFTRIGASDDLAGGRSTFMVEMSETANILHNATEQSLILMDEIGRGTSTFDGLSLAWACADHLAKVTKAYTLFATHYFELTTLADEQKPIHNVHLDAIEYGDKIVFLHAVKEGPASQSYGLQVASLAGVPATVIDKAKLKLQHLENNTYYQNQTESGNQQLDLFATQECHPAVCLIEELDPDNLSPRQALDTLYRLKKMV 417          
BLAST of mRNA_P-wetherbeei_contig19503.2.1 vs. uniprot
Match: A0A832J7D7_9GAMM (DNA mismatch repair protein MutS n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A832J7D7_9GAMM)

HSP 1 Score: 433 bits (1114), Expect = 2.690e-142
Identity = 230/363 (63.36%), Postives = 284/363 (78.24%), Query Frame = 1
Query:    4 RRQTLKGVERYITPELKGFETHILTAADRALRRERELYESLLIALLPEVRALQDTSAALAELDVLASFAERAESLQLCAPEFCSEPRLSISGGRHPLVEQFQDTPFVANDLELDDARRLLLITGPNMGGKSTYMRQTALITLLAHIGSFVPARAALIGPIDAIYSRIGAGDNLAGGQSTFMVEMSETANILHHATAASLVIVDEIGRGTSTYDGMSLAWAAAEHLAQRNRAFTLFATHYFELTALADEVPTVANVRLDAVEHGEDVVFMHSVSAGPASRSFGIAVARRAGVPATVIARARALLDTLERR----HPQQNQHEAPQLPLFD-RPHPALAALSELDPDRLTPREALDALYRLRALI 1077
            RRQTLKG ERYITPELK FE  +L+A +RAL RE+ LYE LL  L+P++  LQ ++ ALAELDVLA+ AERA+SL L  PE  + P L+I GGRHP+VE+  +TPFVAND   D+ RR+L+ITGPNMGGKSTYMRQTALITLLAHIGSFVPA +A+IGPID I++RIGA D+LAGG+STFMVEM+ETANILH+AT  SLV++DE+GRGTST+DG+SLAWA AEHLA +  AFTLFATHYFELT + ++   V NV LDAVEHG+++VFMH+V  GPA++S+G+ VA  AGVP  VI  A+  L  LE       P       PQL LF+ +PHPA   L+E+DPD LTPR+AL+ALY+L+ L+
Sbjct:  500 RRQTLKGAERYITPELKSFEDKVLSANERALAREKALYEQLLEKLIPQLAELQTSATALAELDVLANLAERADSLNLSKPELIATPCLNIVGGRHPVVEKNLETPFVANDTRFDNERRMLIITGPNMGGKSTYMRQTALITLLAHIGSFVPAESAIIGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILHNATEQSLVLMDEVGRGTSTFDGLSLAWACAEHLAAKVGAFTLFATHYFELTTMPEQHANVVNVHLDAVEHGDNIVFMHAVKEGPANQSYGLQVAALAGVPRAVINAAKQRLYQLENTVVSTTPPGWCAPEPQLGLFEPQPHPATEKLTEIDPDELTPRQALEALYQLKQLL 862          
BLAST of mRNA_P-wetherbeei_contig19503.2.1 vs. uniprot
Match: UPI000475E8F4 (DNA mismatch repair protein MutS n=1 Tax=Thioalkalivibrio thiocyanodenitrificans TaxID=243063 RepID=UPI000475E8F4)

HSP 1 Score: 433 bits (1113), Expect = 3.790e-142
Identity = 237/370 (64.05%), Postives = 286/370 (77.30%), Query Frame = 1
Query:    1 TRRQTLKGVERYITPELKGFETHILTAADRALRRERELYESLLIALLPEVRALQDTSAALAELDVLASFAERAESLQLCAPEFCSEPRLSISGGRHPLVEQFQDTPFVANDLELDDARRLLLITGPNMGGKSTYMRQTALITLLAHIGSFVPARAALIGPIDAIYSRIGAGDNLAGGQSTFMVEMSETANILHHATAASLVIVDEIGRGTSTYDGMSLAWAAAEHLAQRNRAFTLFATHYFELTALADEVPTVANVRLDAVEHGEDVVFMHSVSAGPASRSFGIAVARRAGVPATVIARARALLDTLERRHPQQNQHEAPQLPLFDRP-------HPALAALSE----LDPDRLTPREALDALYRLRALI 1077
            TRRQTLKG ER+ITPELK FE  +L+A +RAL RE+ LYE+LL +LL  + ALQ T+ ALAELDVLA FAERAE+L   APE   +P L I  GRHP+VE+  D PFVAN + LDD RR+L+ITGPNMGGKSTYMRQTALI L+AH+GSFVPAR A+IGP+D I++RIGA D+LA G+STFMVEM+E ANIL++AT  SLV++DEIGRGTST+DG+SLAWA AEHL + NRAFTLFATHYFELTALA+   T+ANV +DAVEHG  +VF+H+V  GPA++S+G+ VA  AGVPA VI  AR  L  LER++     H+ PQL LF+          PA  AL E    LDPD L+PREAL+ALYRLRAL+
Sbjct:  493 TRRQTLKGAERFITPELKAFEDKVLSARERALAREKALYEALLQSLLEPLPALQRTAGALAELDVLACFAERAETLGYTAPELTDDPGLLIEDGRHPVVERVLDEPFVANGVCLDDGRRMLVITGPNMGGKSTYMRQTALIVLMAHLGSFVPARRAVIGPVDRIFTRIGASDDLASGRSTFMVEMTEAANILNNATGQSLVLMDEIGRGTSTFDGLSLAWACAEHLTRHNRAFTLFATHYFELTALAERHDTIANVHIDAVEHGNRIVFLHAVKEGPANQSYGLHVAALAGVPADVIRMARQRLAELERQNLSGAPHD-PQLGLFNTDGSAASPADPAAEALREALEALDPDSLSPREALEALYRLRALL 861          
BLAST of mRNA_P-wetherbeei_contig19503.2.1 vs. uniprot
Match: A0A3N1XT50_9GAMM (DNA mismatch repair protein MutS n=1 Tax=Inmirania thermothiophila TaxID=1750597 RepID=A0A3N1XT50_9GAMM)

HSP 1 Score: 432 bits (1112), Expect = 5.080e-142
Identity = 234/362 (64.64%), Postives = 277/362 (76.52%), Query Frame = 1
Query:    4 RRQTLKGVERYITPELKGFETHILTAADRALRRERELYESLLIALLPEVRALQDTSAALAELDVLASFAERAESLQLCAPEFCSEPRLSISGGRHPLVEQFQDTPFVANDLELDDARRLLLITGPNMGGKSTYMRQTALITLLAHIGSFVPARAALIGPIDAIYSRIGAGDNLAGGQSTFMVEMSETANILHHATAASLVIVDEIGRGTSTYDGMSLAWAAAEHLAQRNRAFTLFATHYFELTALADEVPTVANVRLDAVEHGEDVVFMHSVSAGPASRSFGIAVARRAGVPATVIARARALLDTLERRHPQQNQHEAPQLPLFDRPHPALAALSE----LDPDRLTPREALDALYRLRALI 1077
            RRQTLKG ER++TPELK FE  +L+A +RAL RER LYE L+  L   +  LQ+T+AALAELD LA  AERA +L L APE   EP + I GGRHP+VE+  D PF  NDL LD+ RR+L+ITGPNMGGKSTYMRQTALI +LAH GSFVPAR A+IGP+D I++RIGA D+LAGG+STFMVEM+ETA IL+ ATA SLV++DEIGRGTSTYDG++LAWA A HLA+  RAFTLFATHYFELTALA E+ TVANV L+AVEHGE +VF+HSV  GPA RS+GI VA  AG+P  V+A ARA L  LER          PQL LF    PA +A+ E    +DPD LTPR+ALD +YRLRAL+
Sbjct:  499 RRQTLKGAERFVTPELKAFEERVLSARERALARERALYEGLVERLAGALPPLQETAAALAELDALACLAERALALDLTAPELVDEPGIHIEGGRHPVVERGLDEPFTPNDLHLDEGRRMLVITGPNMGGKSTYMRQTALIVILAHAGSFVPARRAVIGPVDRIFTRIGASDDLAGGRSTFMVEMTETAVILNAATAHSLVLMDEIGRGTSTYDGLALAWACARHLARHIRAFTLFATHYFELTALAGEIDTVANVHLEAVEHGERIVFLHSVREGPADRSYGIHVAALAGIPPAVLAEARARLAELERPAGDDRPRSEPQLSLFA---PAASAVEEALRAVDPDGLTPRQALDLVYRLRALL 857          
BLAST of mRNA_P-wetherbeei_contig19503.2.1 vs. uniprot
Match: A0A1J5QTF1_9ZZZZ (DNA mismatch repair protein MutS n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5QTF1_9ZZZZ)

HSP 1 Score: 430 bits (1105), Expect = 3.820e-141
Identity = 229/365 (62.74%), Postives = 280/365 (76.71%), Query Frame = 1
Query:    4 RRQTLKGVERYITPELKGFETHILTAADRALRRERELYESLLIALLPEVRALQDTSAALAELDVLASFAERAESLQLCAPEFCSEPRLSISGGRHPLVEQFQDTPFVANDLELDDARRLLLITGPNMGGKSTYMRQTALITLLAHIGSFVPARAALIGPIDAIYSRIGAGDNLAGGQSTFMVEMSETANILHHATAASLVIVDEIGRGTSTYDGMSLAWAAAEHLAQRNRAFTLFATHYFELTALADEVPTVANVRLDAVEHGEDVVFMHSVSAGPASRSFGIAVARRAGVPATVIARARALLDTLERRHPQQNQHEAPQLPLFDRP-------HPALAALSELDPDRLTPREALDALYRLRALI 1077
            RRQTLK  ERYITPELK FE  +L+A DRAL RE+ LY+++L  LLP + ALQ+ + A+AELDVL +FAERA++L   APEF  E  L I GGRHP+VE     PF+AND  L   R+LLLITGPNMGGKSTYMRQTALI LLAH GSFVPA  A IGP+D I++RIGA D+LAGG+STFMVEM+ETANILHHAT  SLV++DEIGRGTST+DG++LAWA A HL +RNRA+TLFATHYFELT L ++   VANV LDAVEHG+ +VF+HSV  GPAS+S+G+ VA+ AG+P +V+A AR  L  LE    QQ+    PQ  LF  P       HPAL AL ++DPD L+P++AL+ALY+L+AL+
Sbjct:  486 RRQTLKNAERYITPELKTFEDKVLSANDRALAREKALYDAVLEQLLPHIAALQNNAGAVAELDVLCTFAERAQALGYVAPEFTDEAMLEIVGGRHPVVESIAQ-PFIANDTRLSPYRQLLLITGPNMGGKSTYMRQTALIVLLAHCGSFVPAATAKIGPVDRIFTRIGASDDLAGGRSTFMVEMTETANILHHATPHSLVLLDEIGRGTSTFDGLALAWACARHLLERNRAYTLFATHYFELTRLTEDYRQVANVHLDAVEHGDGIVFLHSVEEGPASQSYGLQVAQLAGIPRSVVAAARRRLVQLE----QQSIAAGPQADLFAAPEASDPPPHPALDALMDVDPDELSPKQALEALYKLKALL 845          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19503.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4R2L5A5_9GAMM8.810e-14564.74DNA mismatch repair protein MutS n=1 Tax=Plasticic... [more]
A0A431HZG1_9GAMM1.850e-14464.36DNA mismatch repair protein MutS (Fragment) n=1 Ta... [more]
A0A0S2TF59_9GAMM2.760e-14364.36DNA mismatch repair protein MutS n=1 Tax=Candidatu... [more]
A0A2H6JDL3_9BACT4.440e-14364.36DNA mismatch repair protein MutS n=2 Tax=Bacteria ... [more]
A0A831W8H8_9GAMM4.590e-14362.98DNA mismatch repair protein MutS n=1 Tax=Sedimenti... [more]
A0A351UZ99_9GAMM8.250e-14360.77DNA mismatch repair protein MutS (Fragment) n=1 Ta... [more]
A0A832J7D7_9GAMM2.690e-14263.36DNA mismatch repair protein MutS n=1 Tax=Candidatu... [more]
UPI000475E8F43.790e-14264.05DNA mismatch repair protein MutS n=1 Tax=Thioalkal... [more]
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A0A1J5QTF1_9ZZZZ3.820e-14162.74DNA mismatch repair protein MutS n=1 Tax=mine drai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19503contigP-wetherbeei_contig19503:202..1281 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog713586.KB900536_gene34
Preferred namemutS
PFAMsMutS_I,MutS_II,MutS_III,MutS_IV,MutS_V
Model size1080
Max annot lvl135613|Chromatiales
KEGG koko:K03555
KEGG Pathwayko03430,map03430
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.22e-143
EggNOG OGsCOG0249@1|root,COG0249@2|Bacteria,1MUGX@1224|Proteobacteria,1RNW3@1236|Gammaproteobacteria,1WVV0@135613|Chromatiales
Descriptionthat it carries out the mismatch recognition step. This protein has a weak ATPase activity
Cds size1080
COG categoryL
BRITEko00000,ko00001,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186174.6264894-CDS-P-wetherbeei_contig19503:201..12811683186174.6264894-CDS-P-wetherbeei_contig19503:201..1281Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19503 202..1281 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19503.2.1prot_P-wetherbeei_contig19503.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19503 202..1281 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19503.2.1

>prot_P-wetherbeei_contig19503.2.1 ID=prot_P-wetherbeei_contig19503.2.1|Name=mRNA_P-wetherbeei_contig19503.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=360bp
TRRQTLKGVERYITPELKGFETHILTAADRALRRERELYESLLIALLPEV
RALQDTSAALAELDVLASFAERAESLQLCAPEFCSEPRLSISGGRHPLVE
QFQDTPFVANDLELDDARRLLLITGPNMGGKSTYMRQTALITLLAHIGSF
VPARAALIGPIDAIYSRIGAGDNLAGGQSTFMVEMSETANILHHATAASL
VIVDEIGRGTSTYDGMSLAWAAAEHLAQRNRAFTLFATHYFELTALADEV
PTVANVRLDAVEHGEDVVFMHSVSAGPASRSFGIAVARRAGVPATVIARA
RALLDTLERRHPQQNQHEAPQLPLFDRPHPALAALSELDPDRLTPREALD
ALYRLRALI*
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mRNA from alignment at P-wetherbeei_contig19503:202..1281-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19503.2.1 ID=mRNA_P-wetherbeei_contig19503.2.1|Name=mRNA_P-wetherbeei_contig19503.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1080bp|location=Sequence derived from alignment at P-wetherbeei_contig19503:202..1281- (Phaeothamnion wetherbeei SAG_119_79)
ACCCGGCGCCAGACCCTGAAGGGTGTCGAACGCTATATCACACCCGAACT CAAAGGCTTTGAGACGCACATCCTGACCGCCGCCGATCGCGCGCTGCGTC GTGAACGCGAGCTCTACGAGAGTCTGCTCATCGCACTGCTGCCTGAAGTA CGCGCCCTGCAGGACACCAGCGCGGCGCTGGCCGAACTCGATGTGCTCGC GAGTTTCGCCGAGCGTGCCGAAAGCCTGCAGCTGTGCGCCCCGGAGTTTT GCAGCGAGCCACGTCTCAGTATCAGCGGCGGGCGCCATCCGCTGGTCGAA CAATTTCAGGACACGCCCTTCGTCGCCAATGATCTGGAACTCGATGACGC ACGCCGACTGCTACTCATCACCGGCCCCAATATGGGCGGCAAGTCGACCT ATATGCGCCAGACCGCGCTCATCACCCTGCTCGCCCATATCGGCAGTTTC GTGCCGGCGCGTGCCGCGCTGATCGGGCCGATAGACGCCATCTATTCACG CATCGGTGCGGGCGACAACCTCGCCGGCGGACAAAGCACCTTCATGGTCG AAATGTCCGAAACAGCCAACATCCTGCATCACGCCACCGCCGCCAGCCTG GTGATCGTGGATGAAATCGGGCGCGGCACCAGCACCTATGACGGCATGTC GCTGGCCTGGGCGGCGGCCGAACATCTGGCGCAGCGCAATCGCGCCTTCA CCTTGTTCGCGACCCATTACTTTGAGTTGACGGCGCTCGCCGACGAGGTA CCAACGGTCGCCAATGTGCGCCTGGATGCGGTCGAGCACGGCGAAGACGT GGTGTTCATGCATAGCGTCAGCGCGGGGCCTGCCTCGCGCAGCTTCGGCA TTGCGGTCGCGCGCCGTGCTGGCGTGCCGGCGACGGTTATCGCCCGCGCC CGCGCCCTGCTCGATACCTTGGAGCGCCGCCACCCGCAGCAAAACCAGCA CGAAGCACCGCAACTACCGCTATTCGACCGCCCGCATCCGGCGCTCGCGG CTCTGAGTGAGCTTGACCCGGACCGTCTGACACCGCGCGAGGCGCTGGAT GCGCTATATCGACTGCGCGCGCTCATCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19503:202..1281-

>mRNA_P-wetherbeei_contig19503.2.1 ID=mRNA_P-wetherbeei_contig19503.2.1|Name=mRNA_P-wetherbeei_contig19503.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1080bp|location=Sequence derived from alignment at P-wetherbeei_contig19503:202..1281- (Phaeothamnion wetherbeei SAG_119_79)
ACCCGGCGCCAGACCCTGAAGGGTGTCGAACGCTATATCACACCCGAACT
CAAAGGCTTTGAGACGCACATCCTGACCGCCGCCGATCGCGCGCTGCGTC
GTGAACGCGAGCTCTACGAGAGTCTGCTCATCGCACTGCTGCCTGAAGTA
CGCGCCCTGCAGGACACCAGCGCGGCGCTGGCCGAACTCGATGTGCTCGC
GAGTTTCGCCGAGCGTGCCGAAAGCCTGCAGCTGTGCGCCCCGGAGTTTT
GCAGCGAGCCACGTCTCAGTATCAGCGGCGGGCGCCATCCGCTGGTCGAA
CAATTTCAGGACACGCCCTTCGTCGCCAATGATCTGGAACTCGATGACGC
ACGCCGACTGCTACTCATCACCGGCCCCAATATGGGCGGCAAGTCGACCT
ATATGCGCCAGACCGCGCTCATCACCCTGCTCGCCCATATCGGCAGTTTC
GTGCCGGCGCGTGCCGCGCTGATCGGGCCGATAGACGCCATCTATTCACG
CATCGGTGCGGGCGACAACCTCGCCGGCGGACAAAGCACCTTCATGGTCG
AAATGTCCGAAACAGCCAACATCCTGCATCACGCCACCGCCGCCAGCCTG
GTGATCGTGGATGAAATCGGGCGCGGCACCAGCACCTATGACGGCATGTC
GCTGGCCTGGGCGGCGGCCGAACATCTGGCGCAGCGCAATCGCGCCTTCA
CCTTGTTCGCGACCCATTACTTTGAGTTGACGGCGCTCGCCGACGAGGTA
CCAACGGTCGCCAATGTGCGCCTGGATGCGGTCGAGCACGGCGAAGACGT
GGTGTTCATGCATAGCGTCAGCGCGGGGCCTGCCTCGCGCAGCTTCGGCA
TTGCGGTCGCGCGCCGTGCTGGCGTGCCGGCGACGGTTATCGCCCGCGCC
CGCGCCCTGCTCGATACCTTGGAGCGCCGCCACCCGCAGCAAAACCAGCA
CGAAGCACCGCAACTACCGCTATTCGACCGCCCGCATCCGGCGCTCGCGG
CTCTGAGTGAGCTTGACCCGGACCGTCTGACACCGCGCGAGGCGCTGGAT
GCGCTATATCGACTGCGCGCGCTCATCTAG
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