mRNA_P-wetherbeei_contig19458.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19458.1.1
Unique NamemRNA_P-wetherbeei_contig19458.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19458.1.1 vs. uniprot
Match: A0A2E2BCK6_9GAMM (Outer membrane protein assembly factor BamB n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E2BCK6_9GAMM)

HSP 1 Score: 358 bits (920), Expect = 1.730e-118
Identity = 194/394 (49.24%), Postives = 261/394 (66.24%), Query Frame = 1
Query:   16 RALLVATLVTLLSSC-----------QTTKEIIFRETSNAIKPNELEE-FEARLKVEKLWSERIGKGSDEQYLKLTPAVLGERLYVADRYGRLVATTLSTGKEEWEIHDKNVQYTGGPGGGDGLVLMGTGDGRVIAREADTGKVRWVAKVSSEVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYERTVPTLTLRGVAPPVIDEDVVMAGFDNGRFAAVSLKNGKMVWESPLAVPTGRSDLERMVDVDSAPVLVGTMAYVSSFQGAVAALSISDGKILWTREVSSYEELSVGEDRVYVTDDKGSIWALDANTGTSVWKQEALANRFVTAPIFIDGHVVVADFEGYVHWLDAETGDFEYRERVTKENIIAPALNAGGILLVYSTTGQLVAMR 1161
            RA+ V  +V +L+SC           Q+    I RET        L + +++++ VE++WS+RIGKG++  YLKLTP+V+G  L+VAD+YG+LVAT +S+G+  W+IHDKNV YT G GGGDG+V +GTGDGRVIAR+  TG ++WVAKVSSE+L+A             XXXX             Y+RTVP+LTLRG APPVI  D V AGFDNGR  A+ LK+G+ +W+SPLA+P+GRSDL+RMVDVDSAP++     +V+SF G V+A+S +DG+ILWTRE+SSY  +SVG   VYVTD++GSIWAL+A TG SVWK++ L  R+ TAP + +GHVV                    + R+ K  IIA +L A   L+ YS+ G++VA R
Sbjct:    7 RAIGVLIVVCVLTSCSDYSFTKFRDSQSLSSFINRETVEIEDSGVLSDSYKSKISVEEIWSKRIGKGAENLYLKLTPSVIGGHLFVADQYGKLVATDISSGEPVWQIHDKNVNYTSGAGGGDGMVFIGTGDGRVIARDTQTGNLKWVAKVSSEILSAPTAFNQITVVRTGXXXXYGLDSATGKEIWNYDRTVPSLTLRGNAPPVISGDRVFAGFDNGRLVALDLKSGQSLWDSPLAIPSGRSDLDRMVDVDSAPIVQKNTIFVASFHGGVSAISGTDGRILWTREISSYAGISVGGRYVYVTDEEGSIWALNAETGASVWKKDELKERYPTAPAYYNGHVVXXXXXXXXXXXXXXXXXXXXKSRLDKSRIIARSLRAADSLISYSSNGRVVATR 400          
BLAST of mRNA_P-wetherbeei_contig19458.1.1 vs. uniprot
Match: A0A523P2M3_9PROT (Outer membrane protein assembly factor BamB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P2M3_9PROT)

HSP 1 Score: 324 bits (831), Expect = 3.690e-105
Identity = 192/364 (52.75%), Postives = 255/364 (70.05%), Query Frame = 1
Query:   76 IIFRETSNAIKPNELEEFEARLKVEKLWSERIGKGSDEQYLKLTPAVLGERLYVADRYGRLVATTLSTGKEEWEIHDKNVQYTGGPGGGDGLVLMGTGDGRVIAREADTGKVRWVAKVSSEVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYERTVPTLTLRGVAPPVIDEDVVMAGFDNGRFAAVSLKNGKMVWESPLAVPTGRSDLERMVDVDSAPVLVGTMAYVSSFQGAVAALSISDGKILWTREVSSYEELSVGEDRVYVTDDKGSIWALDANTGTSVWKQEALANRFVTAPIFIDGHVVVADFEGYVHWLDAETGDFEYRERVTKENIIAPALNAGGILLVYSTTGQLVAMRPE 1167
            ++ +E  N+I P +L +FE  ++V K+WS+R GKG D  +++L PA     +Y ADR GR++A ++ TG++ W   +K  + +GGPG GDGLV +GT                 +A VSSEVLAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXY+RT+P LTLRG + PVI   +V+AGFDNGR  A+ L  GK  WE+ L +P+GRSDLERMVDVDS P +V   AYV+SFQG VAA+S+ +G++ WTRE+SS+ +++V E   YVTD+ G++WAL+ NTG S+WKQE L  R VT P  I  +VVV DFEGY+HW+D  TG+F +R R+ K+ I+ P    G +LL +S++G L A RPE
Sbjct:   31 LLKQEEDNSIPPVDLIDFEPTIQVVKIWSDRFGKGVDNLFIQLIPAAYKSAIYTADRDGRMIALSIETGEQLWLERNKKQRISGGPGVGDGLVFVGTXXXXXXXXXXXXXXXXXIAHVSSEVLAAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDRTIPVLTLRGTSAPVIYGQMVIAGFDNGRLVALDLATGKQEWETRLGIPSGRSDLERMVDVDSEPTVVDETAYVASFQGNVAAVSVVNGQMEWTREISSHSKVAVDELHAYVTDEFGTVWALERNTGVSIWKQEGLKARRVTGPAVIGDYVVVGDFEGYLHWIDRNTGEFVHRLRLDKKRILVPCRTVGNVLLAFSSSGVLAAFRPE 394          
BLAST of mRNA_P-wetherbeei_contig19458.1.1 vs. uniprot
Match: A0A3D5DCD7_9GAMM (Outer membrane protein assembly factor BamB n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DCD7_9GAMM)

HSP 1 Score: 307 bits (787), Expect = 2.170e-98
Identity = 175/363 (48.21%), Postives = 233/363 (64.19%), Query Frame = 1
Query:   76 IIFRETSNAIKPNELEEFEARLKVEKLWSERIGKGSDEQYLKLTPAVLGERLYVADRYGRLVATTLSTGKEEWEIHDKNVQYTGGPGGGDGLVLMGTGDGRVIAREADTGKVRWVAKVSSEVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYERTVPTLTLRGVAPPVIDEDVVMAGFDNGRFAAVSLKNGKMVWESPLAVPTGRSDLERMVDVDSAPVLVGTMAYVSSFQGAVAALSISDGKILWTREVSSYEELSVGEDRVYVTDDKGSIWALDANTGTSVWKQEALANRFVTAPIFIDGHVVVADFEGYVHWLDAETGDFEYRERVTKENIIAPALNAGGILLVYSTTGQLVAMRP 1164
            ++ RE  N++ P EL EFE  +++EK+WS R GKG DE ++ L PA    R++ ADR GR++A    TG+E W    K ++ +GGPG GDGL                      +A+VSSE+L             XXXXXXXXXXXXXXXXXXXY+RT+P LTLRG   PVI +++V++GFDN               E+ LAVPTGRSDLERMVD+D+ P +VG   Y+SSFQ +VAA+SI +G++ WTRE+SSY  L+V E RVYVTD+KG++W L+ ++G SVWKQEAL  R VT P  +  +VVV DFEGY+HW+  ETG+F +R R+    I+ P    G ILL +S++G L A +P
Sbjct:   31 LVLREKDNSVPPAELIEFEPTVEIEKVWSNRYGKGVDELFISLIPAPYNSRVFTADRDGRMIALNAETGEEIWTERSKKLRISGGPGTGDGLXXXXXXXXXXXXXXXXXXXXXXIARVSSEILTPPRAAAGTAVVRXXXXXXXXXXXXXXXXXXXYDRTIPILTLRGTGAPVIHDNIVISGFDNXXXXXXXXXXXXXXXETRLAVPTGRSDLERMVDIDAEPTIVGDTVYISSFQASVAAVSIINGQLEWTREISSYSNLAVDESRVYVTDEKGNVWGLERDSGASVWKQEALRARQVTGPAIVGNYVVVGDFEGYLHWMHRETGNFVHRMRLDDNRILVPCRTIGDILLAFSSSGVLAAYQP 393          
BLAST of mRNA_P-wetherbeei_contig19458.1.1 vs. uniprot
Match: A0A661CB97_9GAMM (Outer membrane protein assembly factor BamB n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661CB97_9GAMM)

HSP 1 Score: 280 bits (717), Expect = 4.490e-88
Identity = 178/380 (46.84%), Postives = 246/380 (64.74%), Query Frame = 1
Query:   16 RALLVATLVTLLSSCQTTKEIIFRETSNAIKPNELEEFEARLKVEKLWSERIGKGSDEQYLKLTPAVLGERLYVADRYGRLVATTLSTGKEEWEIHDKNVQYTGGPGGGDGLVLMGTGDGRVIAREADTGKVRWVAKVSSEVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYERTVPTLTLRGVAPPVIDEDVVMAGFDNGRFAAVSLKNGKMVWESPLAVPTGRSDLERMVDVDSAPVLVGTMAYVSSFQGAVAALSISDGKILWTREVSSYEELSVGEDRVYVTDDKGSIWALDANTGTSVWKQEALANRFVTAPIFIDGHVVVADFEGYVHWLDAETGDFEYRERVTKENIIAPALNAGGILLVYSTTGQLVA 1155
            R LL A  + LLS C   + +I  +  N + P  L EF+  +++ +LWS+  GKGS +QYLKLTP+ +  +++VAD  G LVA   ++G   WE  D ++  TGGPG  + L ++G+ +                          XXXXXXXXXXXXXXXXXXXXXXXXXXXX  Y+RTVP+LTLRG + PVI  D+V+AGFD GR +A+ L  GK++WE+ +++ +GRS LERMVD+DS PV++G   YV++FQG VA++++ DG+I W R++SSY  L+  E+ +Y+TDD+  IWAL+ +TG SVWKQE L  R  TAP  I   VVV D EGY+HW+D   G F  R RV+K+ ++AP +    I+  YS+ G L A
Sbjct:    6 RYLLFALALVLLSGCSAVQGLIGSDADNTVPPTPLVEFQTLVEIIQLWSKDTGKGSTKQYLKLTPSHIQGKVFVADVRGNLVAIDATSGNRLWES-DADMNITGGPGSSETLTMIGSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVYDRTVPSLTLRGTSNPVITGDIVIAGFDGGRISAIELHTGKLIWETSVSLASGRSQLERMVDIDSDPVIIGNDIYVATFQGRVASVALEDGRITWARDISSYAGLTADENNIYITDDQSYIWALERSTGNSVWKQENLYARRATAPAVIGELVVVGDLEGYLHWMDKSNGQFVARTRVSKDPLLAPPVAFEEIVYAYSSDGTLSA 384          
BLAST of mRNA_P-wetherbeei_contig19458.1.1 vs. uniprot
Match: A0A251X805_9GAMM (Outer membrane protein assembly factor BamB n=1 Tax=Thioflexithrix psekupsensis TaxID=1570016 RepID=A0A251X805_9GAMM)

HSP 1 Score: 261 bits (668), Expect = 8.990e-81
Identity = 146/383 (38.12%), Postives = 216/383 (56.40%), Query Frame = 1
Query:   10 LLRALLVATLVTLLSSCQTTKEIIFRETSNAIKPNELEEFEARLKVEKL--WSERIGKG-SDEQYLKLTPAVLGERLYVADRYGRLVATTLSTGKEEWEIHDKNVQYTGGPGGGDGLVLMGTGDGRVIAREADTGKVRWVAKVSSEVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYERTVPTLTLRGVAPPVIDEDVVMAGFDNGRFAAVSLKNGKMVWESPLAVPTGRSDLERMVDVDSAPVLVGTMAYVSSFQGAVAALSISDGKILWTREVSSYEELSVGEDRVYVTDDKGSIWALDANTGTSVWKQEALANRFVTAPIFIDGHVVVADFEGYVHWLDAETGDFEYRERVTKENIIAPALNAGGILLVYSTTGQL 1149
            +LR L+   L+++LS C      +F +     +P  L +F   + V  L  W+ +   G   EQ+L L PA+   +++V+D    +      TGK  W+   KN+  + GPG    LV++G+  G +IA  + TG   W  ++SSE+L                                YERTVP LTLRG + PV+    V+AGFDNG+ AAV L NG ++WE+ +AVP GRS+LERMVD+D+ PV++G + YV S++G + A+ +  G++LW RE+SS+  L      VYVTDD+  +WALD  TG++VWKQ  L NR +TAP+    +V+V D EGY+HW+ AE G F  R +  K  I+AP + A   L VY+ +G++
Sbjct:    1 MLRVLIGIGLLSVLSGCG-----LFTQKDVTREPAPLVDFTPSVAVSGLVQWTVKASSGLKAEQFLPLKPAIFDRKIFVSDPRNGVTVFNADTGKVVWKNALKNIPVSSGPGVNQELVIVGSNKGDLIALNSTTGAEVWRTELSSEILTPPQLAQGVVVARTLDGKLWGIDSRSGQRTWVYERTVPVLTLRGASTPVLVSGAVIAGFDNGKLAAVQLDNGALLWEASIAVPRGRSELERMVDIDADPVIMGDVLYVVSYRGRMVAMDLYSGRVLWEREMSSHAGLGADNRYVYVTDDQDHVWALDRFTGSAVWKQTKLENRQLTAPVSTGQYVIVGDVEGYLHWMRAEDGQFVGRHQTDKSRILAPPILAQDRLYVYNQSGRI 378          
BLAST of mRNA_P-wetherbeei_contig19458.1.1 vs. uniprot
Match: A0A1G0FUS4_9GAMM (Outer membrane protein assembly factor BamB n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0FUS4_9GAMM)

HSP 1 Score: 261 bits (666), Expect = 2.200e-80
Identity = 175/382 (45.81%), Postives = 236/382 (61.78%), Query Frame = 1
Query:   16 RALLVATLVTLLSSCQTTKEI--IFRETSNAIKPNELEEFEARLKVEKLWSERIGKGSDEQYLKLTPAVLGERLYVADRYGRLVATTLSTGKEEWEIHDKNVQYTGGPGGGDGLVLMGTGDGRVIAREADTGKVRWVAKVSSEVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYERTVPTLTLRGVAPPVIDEDVVMAGFDNGRFAAVSLKNGKMVWESPLAVPTGRSDLERMVDVDSAPVLVGTMAYVSSFQGAVAALSISDGKILWTREVSSYEELSVGEDRVYVTDDKGSIWALDANTGTSVWKQEALANRFVTAPIFIDGHVVVADFEGYVHWLDAETGDFEYRERVTKENIIAPALNAGGILLVYSTTGQLVA 1155
            +A+ +  L +LL  C   K+I     +  N   P+ L E  A + + ++WS+  GKG+ +Q+LKL PA+  +++++AD  G + A     G   W  HD ++  TGGPG G  LVL GT                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX Y+RTVP LTLRG + P+I +D+V+AGFD GR A + L  GK+VWE+ +AV  GRS+LERMVD+D+ P++   + YV+++QG +AA+++S G ILWTR++SSY  +SV    +Y+TDD   +WAL+  TG SVWKQE LA R  T P  I   VVV D EGY+HW+D  TG+F  R +V  E II P +    IL  Y++ G L A
Sbjct:    7 KAITLLFLGSLLCGCGINKKISDYMGDEDNTEPPSPLVEIAASVNITEVWSKNTGKGTAKQFLKLIPALSQQKIFIADSKGMVNAIDAVNGSTVWG-HDTDLHITGGPGIGATLVLAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYDRTVPALTLRGTSSPIIADDMVIAGFDEGRIAVMELTTGKLVWETKVAVAGGRSELERMVDIDAEPLVADGIIYVATYQGKLAAVALSSGDILWTRDISSYAGISVDSSNLYITDDNSHVWALERQTGVSVWKQEKLAARAATGPANIGAFVVVGDLEGYLHWMDKNTGEFVARIQVADEKIITPPIVTDNILYAYTSGGTLGA 387          
BLAST of mRNA_P-wetherbeei_contig19458.1.1 vs. uniprot
Match: A0A7Y5DRI7_9GAMM (Outer membrane protein assembly factor BamB n=1 Tax=Methyloglobulus sp. TaxID=2518622 RepID=A0A7Y5DRI7_9GAMM)

HSP 1 Score: 259 bits (661), Expect = 1.910e-79
Identity = 154/361 (42.66%), Postives = 220/361 (60.94%), Query Frame = 1
Query:   97 NAIKPNELEEFEARLKVEKLWSERIGKGSDEQYLKLTPAVLGERLYVADRYGRLVATTLSTGKEEWE--IHDKN---VQYTGGPGGGDGLVLMGTGDGRVIAREADTGKVRWVAKVSSEVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYERTVPTLTLRGVAPPVIDEDVVMAGFDNGRFAAVSLKNGKMVWESPLAVPTGRSDLERMVDVDSAPVLVGTMAYVSSFQGAVAALSISDGKILWTRE-VSSYEELSVGEDRVYVTDDKGSIWALDANTGTSVWKQEALANRFVTAPIFIDGHVVVADFEGYVHWLDAETGDFEYRERVTKENIIAPALNAGGILLVYSTTGQLVAMR 1161
            NA  PNEL E+   ++ E LW E +G G+D Q LKL PA+   R++ ADR G + A  L+TGK  WE  I D+N   V ++GGPG G   V++G+ +G VIA   D+G V W   V+SEV++              XXXXXXXXXXXX     YE  VP LT+RG   P+I ED ++ G+DNG+  A+ L++GK VWES + +P GRS++ER+VD+D  P+    + Y +S+ G  AA+SI DG +LW  E VSS+  LS  E  +Y+++  G +  LD  TG+S+W+Q+ L  R +T+P+   G+VVV DF+GYVHWL +  G    R +V  + I A  +  G  + +Y+  G L A++
Sbjct:   44 NADPPNELVEYTPEIQAEVLWKESVGVGTDGQTLKLVPAIGNGRIFAADRDGLVQARDLTTGKLAWEVEIEDENEAEVHFSGGPGLGLTTVILGSSNGEVIALNIDSGAVLWKTPVASEVMSVPVVANGIAIIRTTXXXXXXXXXXXXQKVWSYEHNVPALTVRGTGAPLIIEDTIIEGYDNGKLMALRLEDGKYVWESSVTIPKGRSEVERLVDIDVDPIESRGVIYTASYNGGSAAVSILDGDVLWRNEAVSSHTGLSQDEQYLYISNSDGHVLQLDKRTGSSLWEQKDLHGRKLTSPVAYQGNVVVGDFDGYVHWLSSTDGRQLGRVQVADDAIDAKPIVVGDTVYIYAKDGTLAALK 404          
BLAST of mRNA_P-wetherbeei_contig19458.1.1 vs. uniprot
Match: A0A2E2WRR9_9GAMM (Outer membrane protein assembly factor BamB n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E2WRR9_9GAMM)

HSP 1 Score: 260 bits (664), Expect = 3.670e-79
Identity = 164/358 (45.81%), Postives = 223/358 (62.29%), Query Frame = 1
Query:   82 FRETSNAIKPNELEEFEARLKVEKLWSERIGKGSDEQYLKLTPAVLGERLYVADRYGRLVATTLSTGKEEWEIHDKNVQYTGGPGGGDGLVLMGTGDGRVIAREADTGKVRWVAKVSSEVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYERTVPTLTLRGVAPPVIDEDVVMAGFDNGRFAAVSLKNGKMVWESPLAVPTGRSDLERMVDVDSAPVLVGTMAYVSSFQGAVAALSISDGKILWTREVSSYEELSVGEDRVYVTDDKGSIWALDANTGTSVWKQEALANRFVTAPIFIDGHVVVADFEGYVHWLDAETGDFEYRERVTKENIIAPALNAGGILLVYSTTGQLVA 1155
            F    N + P+ L  F    K+ K+W +  GKG D+ + K+TP +L E++++AD  G + A T  TG   W  +D  +  TGGPG G  LVL+GT                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX Y+R+VP L+LRG + PVI   +++ GFD GR A + LK GK+VWE  +A+  GR++LERMVD+D+ P+++  + YV++FQ  V+ALS+  G+ILW RE+SS+ ELS     +++T+D GS+WAL+  T     KQE LANR VT P  +   V+V D EGY+HWLD ETGDF  R R+  + I+   +N+   L VYS++G L A
Sbjct:   29 FGGKDNTVPPSPLVNFIETAKLNKVWXQNTGKGXDDSFTKITPTILDEQIFIADPKGNIAALTTKTGDFIWR-NDSRLSITGGPGAGSSLVLVGTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYDRSVPALSLRGTSTPVIANGLIITGFDGGRLAVIELKTGKLVWEKKVALSRGRNELERMVDIDAQPLVIEKIIYVTTFQANVSALSLETGQILWQREISSHSELSADGKNIFLTEDNGSVWALNRFTXXXXXKQEKLANRQVTGPAILGDKVIVCDVEGYMHWLDKETGDFAVRTRIGXDPILTQPINSNDXLFVYSSSGXLSA 385          
BLAST of mRNA_P-wetherbeei_contig19458.1.1 vs. uniprot
Match: A0A3S0U4P0_9GAMM (Outer membrane protein assembly factor BamB n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3S0U4P0_9GAMM)

HSP 1 Score: 256 bits (654), Expect = 1.160e-78
Identity = 135/358 (37.71%), Postives = 211/358 (58.94%), Query Frame = 1
Query:   91 TSNAIKPNELEEFEARLKVEKLWSERIGKGSDEQYLKLTPAVLGERLYVADRYGRLVATTLSTGKEEWEIHDKNVQYTGGPGGGD-GLVLMGTGDGRVIAREADTGKVRWVAKVSSEVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYERTVPTLTLRGVAPPVIDEDVVMAGFDNGRFAAVSLKNGKMVWESPLAVPTGRSDLERMVDVDSAPVLVGTMAYVSSFQGAVAALSISDGKILWTREVSSYEELSVGEDRVYVTDDKGSIWALDANTGTSVWKQEALANRFVTAPIFIDGHVVVADFEGYVHWLDAETGDFEYRERVTKENIIAPALNAGGILLVYSTTGQLVAMR 1161
            + N + P EL+     + V++LW  ++G G+ +Q+L+L PA+   R+Y A   G ++A    TG+  WE + + +  TGG G  + GLVL+GT  G+V+A + + G+  W A+VSSEVLA                               Y  +VP L+LRG APP++ + +V+AG D+G+   +SL  G  + E  +A P GR+++ERM+D+DS P +VG   Y+++++G+VAA+ +  G ++WTR++SSY  L+V   +VYV+DD  ++ ALD  +G ++WKQ  L  R ++AP+  D +VVV DFEGY+HWL  ++G    R R    +II P + AG I+ VY   G L A R
Sbjct:   26 SDNTLPPAELQTVAQPIGVQQLWETKVGAGAKDQFLRLVPALADGRIYAASADGVVMALDALTGQRLWETNTQ-LPITGGVGLSETGLVLVGTSKGQVVALQQENGQEAWRAQVSSEVLAPPRAGNGIVVVRSGDGKFTGLDARTGERRWVYVHSVPALSLRGSAPPLVVQGLVVAGLDSGKLLVLSLDKGLPLTEKTIAAPRGRTEIERMIDIDSEPKVVGDTLYLAAYRGSVAAIDMRGGNLVWTRDLSSYAGLAVDAGQVYVSDDTDAVIALDRRSGGTLWKQPELTGRRLSAPVATDDYVVVGDFEGYLHWLSKDSGRIVGRVRAASASIITPPIAAGNIVFVYGKGGTLSAFR 382          
BLAST of mRNA_P-wetherbeei_contig19458.1.1 vs. uniprot
Match: UPI00145D4B1A (outer membrane protein assembly factor BamB n=1 Tax=Candidatus Competibacter phosphatis TaxID=221280 RepID=UPI00145D4B1A)

HSP 1 Score: 256 bits (653), Expect = 1.500e-78
Identity = 136/363 (37.47%), Postives = 208/363 (57.30%), Query Frame = 1
Query:   82 FRETSNAIKPNELEEFEARLKVEKLWSERIGKGSDEQYLKLTPAVLGERLYVADRYGRLVATTLSTGKEEWEIHDKNVQYTGGPG-GGDGLVLMGTGDGRVIAREADTGKVRWVAKVSSEVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYERTVPTLTLRGVAPPVIDEDVVMAGFDNGRFAAVSLKNGKMVWESPLAVPTGRSDLERMVDVDSAPVLVGTMAYVSSFQGAVAALSISDGKILWTREVSSYEELSVGEDRVYVTDDKGSIWALDANTGTSVWKQEALANRFVTAPIFIDGHVVVADFEGYVHWLDAETGDFEYRERVTKENIIAPALNAGGILLVYSTTGQLVAMRPE 1167
            F  + N+I P EL      + V++LW  ++G G+++Q+++LTPA+L  RLY A   G +VA     G+  WE   K +  +GG G   +G+VL GT  G+V+A   + GK  W ++VSSEVLA                               Y   VP L+LRG APP++  ++++AG D G+   +SL  G  + E  +A P GR+++ER++D+DS P + G   Y+++++G VAA+++ DG +LWTR +SSY  L V   +VY++DD  S+ ALD   G ++WKQ  L+ R ++AP   + +VVV D+EGY+HWL  ++G    R R   + I+AP + AG I+ VY   G L A R E
Sbjct:   20 FGGSDNSIPPAELISIAQPINVQQLWETQVGSGTEKQFIRLTPALLDGRLYAASHDGTVVALDAINGQRLWETATK-LPISGGVGVSQNGMVLFGTDKGQVVALRQEDGKEAWRSQVSSEVLAPPRAGGDLVVVRSNDGKFTGLDARTGERRWVYSHIVPALSLRGSAPPLVVGNLIIAGLDTGKLLVLSLDKGLPITEKTIAPPRGRTEIERLIDIDSEPKVFGDTLYLAAYRGNVAAINMRDGNLLWTRNLSSYAGLDVDARQVYLSDDTDSVLALDRGNGGTLWKQSELSGRRLSAPAATNDYVVVGDYEGYLHWLSKDSGRIVGRVRAASKGIVAPPVAAGNIVFVYGQGGALSAFRAE 381          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19458.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2BCK6_9GAMM1.730e-11849.24Outer membrane protein assembly factor BamB n=1 Ta... [more]
A0A523P2M3_9PROT3.690e-10552.75Outer membrane protein assembly factor BamB n=1 Ta... [more]
A0A3D5DCD7_9GAMM2.170e-9848.21Outer membrane protein assembly factor BamB n=1 Ta... [more]
A0A661CB97_9GAMM4.490e-8846.84Outer membrane protein assembly factor BamB n=2 Ta... [more]
A0A251X805_9GAMM8.990e-8138.12Outer membrane protein assembly factor BamB n=1 Ta... [more]
A0A1G0FUS4_9GAMM2.200e-8045.81Outer membrane protein assembly factor BamB n=1 Ta... [more]
A0A7Y5DRI7_9GAMM1.910e-7942.66Outer membrane protein assembly factor BamB n=1 Ta... [more]
A0A2E2WRR9_9GAMM3.670e-7945.81Outer membrane protein assembly factor BamB n=1 Ta... [more]
A0A3S0U4P0_9GAMM1.160e-7837.71Outer membrane protein assembly factor BamB n=1 Ta... [more]
UPI00145D4B1A1.500e-7837.47outer membrane protein assembly factor BamB n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19458contigP-wetherbeei_contig19458:108..1277 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1116472.MGMO_86c00110
Preferred namebamB
PFAMsPQQ_2,PQQ_3
Model size1170
Max annot lvl135618|Methylococcales
KEGG koko:K17713
KEGG TC1.B.33.1
Hectar predicted targeting categorysignal peptide
Exons1
Evalue5.9e-76
EggNOG OGsCOG1520@1|root,COG1520@2|Bacteria,1MXIJ@1224|Proteobacteria,1RN4V@1236|Gammaproteobacteria,1XE8E@135618|Methylococcales
DescriptionPart of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Cds size1170
COG categoryM
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186172.7707615-CDS-P-wetherbeei_contig19458:107..12771683186172.7707615-CDS-P-wetherbeei_contig19458:107..1277Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19458 108..1277 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19458.1.1prot_P-wetherbeei_contig19458.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19458 108..1277 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19458.1.1

>prot_P-wetherbeei_contig19458.1.1 ID=prot_P-wetherbeei_contig19458.1.1|Name=mRNA_P-wetherbeei_contig19458.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=390bp
MSFLLRALLVATLVTLLSSCQTTKEIIFRETSNAIKPNELEEFEARLKVE
KLWSERIGKGSDEQYLKLTPAVLGERLYVADRYGRLVATTLSTGKEEWEI
HDKNVQYTGGPGGGDGLVLMGTGDGRVIAREADTGKVRWVAKVSSEVLAA
PTAGNGVTVVRTGDGRLYGLNSSTGAELWVYERTVPTLTLRGVAPPVIDE
DVVMAGFDNGRFAAVSLKNGKMVWESPLAVPTGRSDLERMVDVDSAPVLV
GTMAYVSSFQGAVAALSISDGKILWTREVSSYEELSVGEDRVYVTDDKGS
IWALDANTGTSVWKQEALANRFVTAPIFIDGHVVVADFEGYVHWLDAETG
DFEYRERVTKENIIAPALNAGGILLVYSTTGQLVAMRPE*
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mRNA from alignment at P-wetherbeei_contig19458:108..1277-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19458.1.1 ID=mRNA_P-wetherbeei_contig19458.1.1|Name=mRNA_P-wetherbeei_contig19458.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1170bp|location=Sequence derived from alignment at P-wetherbeei_contig19458:108..1277- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTTTTTTGCTGCGCGCCCTGCTGGTGGCGACCCTGGTCACCCTGTT GAGCTCTTGCCAGACGACCAAGGAAATAATTTTCCGCGAGACCAGCAATG CCATCAAACCCAACGAACTCGAAGAGTTCGAAGCGCGCCTCAAAGTCGAG AAGCTGTGGTCCGAACGTATTGGCAAAGGCTCTGACGAACAGTATCTCAA GCTCACGCCGGCGGTACTCGGCGAGCGTCTGTACGTCGCTGATCGCTACG GCCGCCTGGTCGCGACCACGCTCTCTACCGGCAAGGAAGAATGGGAGATC CACGACAAGAACGTGCAGTACACCGGCGGCCCGGGCGGCGGTGACGGCCT GGTGCTGATGGGCACCGGTGATGGCCGCGTGATTGCGCGCGAAGCCGATA CGGGCAAAGTGCGCTGGGTGGCCAAAGTCTCAAGCGAAGTGCTGGCTGCG CCGACTGCCGGCAATGGTGTGACGGTAGTGCGCACCGGCGATGGCCGGCT GTATGGCCTCAATTCCAGCACCGGCGCCGAGCTGTGGGTGTACGAGCGTA CCGTGCCTACCCTTACCCTGCGCGGCGTTGCGCCGCCGGTCATCGACGAG GATGTCGTAATGGCGGGCTTTGACAACGGCCGCTTCGCGGCGGTAAGCCT CAAGAACGGCAAGATGGTGTGGGAAAGCCCGCTCGCGGTGCCTACCGGCC GCTCCGATCTGGAACGCATGGTCGATGTTGACTCGGCGCCGGTACTGGTC GGCACCATGGCCTACGTCTCAAGCTTTCAAGGTGCGGTCGCGGCGCTGTC AATCTCCGACGGCAAGATTCTATGGACCCGCGAAGTATCGTCCTACGAAG AACTCTCGGTCGGCGAGGATCGCGTCTATGTGACAGATGACAAGGGTTCG ATCTGGGCCTTGGACGCCAACACCGGTACCTCGGTGTGGAAACAGGAAGC CCTCGCCAATCGCTTTGTTACCGCGCCGATCTTTATCGACGGTCATGTGG TGGTTGCCGACTTCGAAGGCTATGTGCATTGGCTGGATGCCGAGACCGGC GACTTCGAATATCGCGAGCGTGTCACCAAGGAAAACATCATTGCACCCGC GCTCAATGCCGGCGGCATCCTGCTGGTCTATTCGACCACCGGCCAGCTCG TCGCGATGCGGCCCGAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19458:108..1277-

>mRNA_P-wetherbeei_contig19458.1.1 ID=mRNA_P-wetherbeei_contig19458.1.1|Name=mRNA_P-wetherbeei_contig19458.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1170bp|location=Sequence derived from alignment at P-wetherbeei_contig19458:108..1277- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTTTTTTGCTGCGCGCCCTGCTGGTGGCGACCCTGGTCACCCTGTT
GAGCTCTTGCCAGACGACCAAGGAAATAATTTTCCGCGAGACCAGCAATG
CCATCAAACCCAACGAACTCGAAGAGTTCGAAGCGCGCCTCAAAGTCGAG
AAGCTGTGGTCCGAACGTATTGGCAAAGGCTCTGACGAACAGTATCTCAA
GCTCACGCCGGCGGTACTCGGCGAGCGTCTGTACGTCGCTGATCGCTACG
GCCGCCTGGTCGCGACCACGCTCTCTACCGGCAAGGAAGAATGGGAGATC
CACGACAAGAACGTGCAGTACACCGGCGGCCCGGGCGGCGGTGACGGCCT
GGTGCTGATGGGCACCGGTGATGGCCGCGTGATTGCGCGCGAAGCCGATA
CGGGCAAAGTGCGCTGGGTGGCCAAAGTCTCAAGCGAAGTGCTGGCTGCG
CCGACTGCCGGCAATGGTGTGACGGTAGTGCGCACCGGCGATGGCCGGCT
GTATGGCCTCAATTCCAGCACCGGCGCCGAGCTGTGGGTGTACGAGCGTA
CCGTGCCTACCCTTACCCTGCGCGGCGTTGCGCCGCCGGTCATCGACGAG
GATGTCGTAATGGCGGGCTTTGACAACGGCCGCTTCGCGGCGGTAAGCCT
CAAGAACGGCAAGATGGTGTGGGAAAGCCCGCTCGCGGTGCCTACCGGCC
GCTCCGATCTGGAACGCATGGTCGATGTTGACTCGGCGCCGGTACTGGTC
GGCACCATGGCCTACGTCTCAAGCTTTCAAGGTGCGGTCGCGGCGCTGTC
AATCTCCGACGGCAAGATTCTATGGACCCGCGAAGTATCGTCCTACGAAG
AACTCTCGGTCGGCGAGGATCGCGTCTATGTGACAGATGACAAGGGTTCG
ATCTGGGCCTTGGACGCCAACACCGGTACCTCGGTGTGGAAACAGGAAGC
CCTCGCCAATCGCTTTGTTACCGCGCCGATCTTTATCGACGGTCATGTGG
TGGTTGCCGACTTCGAAGGCTATGTGCATTGGCTGGATGCCGAGACCGGC
GACTTCGAATATCGCGAGCGTGTCACCAAGGAAAACATCATTGCACCCGC
GCTCAATGCCGGCGGCATCCTGCTGGTCTATTCGACCACCGGCCAGCTCG
TCGCGATGCGGCCCGAGTGA
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