mRNA_P-wetherbeei_contig18985.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18985.1.1
Unique NamemRNA_P-wetherbeei_contig18985.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18985.1.1 vs. uniprot
Match: A0A6N7GTN5_9HYPH (Esterase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GTN5_9HYPH)

HSP 1 Score: 474 bits (1221), Expect = 7.200e-167
Identity = 221/273 (80.95%), Postives = 245/273 (89.74%), Query Frame = 1
Query:   25 LAVIAGSFSAAGAAAQQPMALRDMGSFHVGGRKVEISGLPVKEIVRVAGGPTSKLDPNGTYHAEQMYAQYFLVQNRKGKWPLLMWHGGGLTGATYETTPDGREGWRDMMIRKGWDVYVTDATERGRSGFASPLVWKDDPIFLTETDPWERFRIGPGAGSFDKDPAKRKLLPGNQFPTEAYDNFLKQIVPRWLSTDKAIVAAYVALIDKVCPCVILAHSQGGHFAFLAAEQRPDKIKGMISVEPAASVRADGAKLLQDMPLLLLYGEYIEQDVR 843
            +A +A       A+AQQP+ LRDMGSFHVGGRKVE++G PVKEIVRV GGPTSKLD NGTYH E MYAQYFLVQNRKG+WPLLMWHGGGLTGATYETTPDGREGWRDMMIR+GWDVY+TDATERGRSGFA+P++WKDDPIFLTE DPW+RFRIGPGAGSF+ DPAKRKLLPGNQFP EAYDNFLKQIVPRWLSTDKAI+ +YVALIDKVCPCVILAHSQGGHFAF AAEQRPDK+K M+SVEPA    A  AK ++DMPLL++YG+YI+QD R
Sbjct:    6 IAALATGLLVNSASAQQPLTLRDMGSFHVGGRKVEVTGQPVKEIVRVPGGPTSKLDLNGTYHVEHMYAQYFLVQNRKGQWPLLMWHGGGLTGATYETTPDGREGWRDMMIRRGWDVYITDATERGRSGFAAPMIWKDDPIFLTEVDPWQRFRIGPGAGSFNADPAKRKLLPGNQFPIEAYDNFLKQIVPRWLSTDKAILDSYVALIDKVCPCVILAHSQGGHFAFRAAEQRPDKVKAMVSVEPAIGGGASDAKAVKDMPLLIVYGDYIDQDPR 278          
BLAST of mRNA_P-wetherbeei_contig18985.1.1 vs. uniprot
Match: A0A1H4LZI4_9HYPH (Uncharacterized protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1H4LZI4_9HYPH)

HSP 1 Score: 434 bits (1116), Expect = 7.100e-151
Identity = 207/281 (73.67%), Postives = 234/281 (83.27%), Query Frame = 1
Query:    1 VRRSTLATLAVIAGSFSAAGAAAQQPMALRDMGSFHVGGRKVEISGLPVKEIVRVAGGPTSKLDPNGTYHAEQMYAQYFLVQNRKGKWPLLMWHGGGLTGATYETTPDGREGWRDMMIRKGWDVYVTDATERGRSGFASPLVWKDDPIFLTETDPWERFRIGPGAGSFDKDPAKRKLLPGNQFPTEAYDNFLKQIVPRWLSTDKAIVAAYVALIDKVCPCVILAHSQGGHFAFLAAEQRPDKIKGMISVEPAASVRADGAKLLQDMPLLLLYGEYIEQDVR 843
            +R + LATL  + G+ S A      P+ALRDMGSFHVGGR  E+SGLPV++IVRV GGPTSKLDPNG Y  EQMY QYFLVQNRKGKWPLLMWHGGGLTG TYETTPDGREGWRDM IRKGWDVYV+DA ERGRS FASP +WK  P+FLT+TDPWERFRIGPGAGSFD DPAKRKLLPGNQFP EA+D F KQIVPRWLSTD A++ AY+ALIDKVCPCV+L HSQGG F F AAE RPDKIKG++SVE A++   D A LL+ +P+L ++G+YIEQD R
Sbjct:    3 LRNAFLATLLCLTGTASYAA----DPIALRDMGSFHVGGRIAELSGLPVQDIVRVPGGPTSKLDPNGRYQVEQMYVQYFLVQNRKGKWPLLMWHGGGLTGVTYETTPDGREGWRDMFIRKGWDVYVSDAMERGRSSFASPDIWKSQPLFLTQTDPWERFRIGPGAGSFDADPAKRKLLPGNQFPIEAFDAFTKQIVPRWLSTDDAVLTAYIALIDKVCPCVLLTHSQGGVFGFKAAEARPDKIKGIVSVEAASAGNLDKAPLLKSIPILGVFGDYIEQDSR 279          
BLAST of mRNA_P-wetherbeei_contig18985.1.1 vs. uniprot
Match: A0A127F676_9HYPH (Hydrolase/carboxylic esterase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F676_9HYPH)

HSP 1 Score: 373 bits (958), Expect = 6.680e-127
Identity = 175/274 (63.87%), Postives = 217/274 (79.20%), Query Frame = 1
Query:   31 VIAGSFSAA---GAAAQQPMALRDMGSFHVGGRKVEISGLPVKEIVRVAGGPTSKLDPNGTYHAEQMYAQYFLVQNRKGKWPLLMWHGGGLTGATYETTPDGREGWRDMMIRKGWDVYVTDATERGRSGFASPLVWKDDPIFLTETDPWERFRIGPGAGSFDKDPAKRKLLPGNQFPTEAYDNFLKQIVPRWLSTDKAIVAAYVALIDKVCPCVILAHSQGGHFAFLAAEQRPDKIKGMISVEPAASVRADGAKLLQDMPLLLLYGEYIEQDVR 843
            ++ G+F AA   G AA + + LR MGSFHVGGR  E+SG  V+ I R  GGP +KLDPNG Y  EQMY QYFL + +KGK+PLLMWHGGGLTG TYE+TPDGR+GW +  IRKGWD YV+DA ERGRSGFAS  +W DDPIFLT  DP+ERFRIG G GS++ DP KRKLLPG+QFP EAY+N++KQ VPRWLSTD AI+  Y+ALIDKVCPCV+L HSQGG+F FLAAEQRPDKIKG+++VE A + + + A  L+ +P+L+++G+Y++Q  R
Sbjct:    4 ILMGAFLAAACFGTAAAEDIVLRGMGSFHVGGRIAEVSGKEVRMIQRQPGGPMTKLDPNGQYMVEQMYVQYFLPKVKKGKYPLLMWHGGGLTGVTYESTPDGRDGWMNFFIRKGWDTYVSDAVERGRSGFASKDIWPDDPIFLTYQDPFERFRIGDGEGSWNADPQKRKLLPGDQFPAEAYENYMKQTVPRWLSTDAAILRGYLALIDKVCPCVLLVHSQGGNFGFLAAEQRPDKIKGIVAVESATAGKVENAAKLKHVPVLMVFGDYVDQHPR 277          
BLAST of mRNA_P-wetherbeei_contig18985.1.1 vs. uniprot
Match: A0A345ZYB2_9HYPH (Esterase n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZYB2_9HYPH)

HSP 1 Score: 373 bits (958), Expect = 6.680e-127
Identity = 174/259 (67.18%), Postives = 206/259 (79.54%), Query Frame = 1
Query:   67 AQQPMALRDMGSFHVGGRKVEISGLPVKEIVRVAGGPTSKLDPNGTYHAEQMYAQYFLVQNRKGKWPLLMWHGGGLTGATYETTPDGREGWRDMMIRKGWDVYVTDATERGRSGFASPLVWKDDPIFLTETDPWERFRIGPGAGSFDKDPAKRKLLPGNQFPTEAYDNFLKQIVPRWLSTDKAIVAAYVALIDKVCPCVILAHSQGGHFAFLAAEQRPDKIKGMISVEPAASVRADGAKLLQDMPLLLLYGEYIEQDVR 843
            A +P+ LR MGSFHVGGR VE+SG PVKE+V   GG  +KLDPNG Y  E MYAQYFL QNRKGK+PLLMWHGGGLTG TYETTPDGREGW +M +RKGWDVYV+DA ERGRSGFASP +W+  P FLT+  P+ERFRIG G GS++ DPAK K+LPGNQFP EAYDNF+KQ VPRW +TD AI+AAY AL+DKVCPCV+L HSQ G F F  A+ RPDKIKG+++VEPA +     A  L+++P L++YG+YI  D R
Sbjct:   19 ADEPIVLRGMGSFHVGGRVVEVSGKPVKEVVFSPGGVPAKLDPNGLYQVEGMYAQYFLPQNRKGKYPLLMWHGGGLTGVTYETTPDGREGWLNMFVRKGWDVYVSDAVERGRSGFASPDIWQGQPNFLTKAGPFERFRIGDGPGSWNADPAKMKVLPGNQFPVEAYDNFMKQNVPRWTTTDTAIIAAYTALVDKVCPCVLLVHSQAGGFGFKVAQARPDKIKGIVAVEPAVAGDKAQAANLKNIPTLVVYGDYIATDSR 277          
BLAST of mRNA_P-wetherbeei_contig18985.1.1 vs. uniprot
Match: A0A537L6P6_9PROT (Esterase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L6P6_9PROT)

HSP 1 Score: 372 bits (954), Expect = 2.610e-126
Identity = 170/259 (65.64%), Postives = 208/259 (80.31%), Query Frame = 1
Query:   67 AQQPMALRDMGSFHVGGRKVEISGLPVKEIVRVAGGPTSKLDPNGTYHAEQMYAQYFLVQNRKGKWPLLMWHGGGLTGATYETTPDGREGWRDMMIRKGWDVYVTDATERGRSGFASPLVWKDDPIFLTETDPWERFRIGPGAGSFDKDPAKRKLLPGNQFPTEAYDNFLKQIVPRWLSTDKAIVAAYVALIDKVCPCVILAHSQGGHFAFLAAEQRPDKIKGMISVEPAASVRADGAKLLQDMPLLLLYGEYIEQDVR 843
            A   + LR MGSFH+GGR  E+SG P+K+I RV GGP SKLDPNG +  E MY QYFL + RKGK+PLLMWHGGGLTGATYE+TPDGREGW +M +RKGWD YV+DA ERGRSGFASP VW D PIFL   DP+ERFRIG GAGS++ D AKRK +PG QFP +AYDN++KQ VPRWLSTDKAIV AY+AL+DKVCPCV+L HSQGG F F  AEQRPDKIK +++VE A++ +   A  L+D+P++L++G+Y+++  R
Sbjct:   18 AADDIVLRGMGSFHIGGRIAEVSGKPIKDIQRVPGGPVSKLDPNGQFMVEAMYVQYFLPKARKGKYPLLMWHGGGLTGATYESTPDGREGWLNMFVRKGWDTYVSDAVERGRSGFASPDVWSDSPIFLNYQDPYERFRIGQGAGSWNADVAKRKPMPGTQFPVDAYDNYMKQSVPRWLSTDKAIVDAYLALVDKVCPCVLLLHSQGGTFGFQVAEQRPDKIKAIVAVESASAGKVANAPKLKDIPVMLMFGDYVDEHPR 276          
BLAST of mRNA_P-wetherbeei_contig18985.1.1 vs. uniprot
Match: A0A537VWW6_9PROT (Esterase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537VWW6_9PROT)

HSP 1 Score: 369 bits (946), Expect = 4.590e-125
Identity = 170/260 (65.38%), Postives = 207/260 (79.62%), Query Frame = 1
Query:   64 AAQQPMALRDMGSFHVGGRKVEISGLPVKEIVRVAGGPTSKLDPNGTYHAEQMYAQYFLVQNRKGKWPLLMWHGGGLTGATYETTPDGREGWRDMMIRKGWDVYVTDATERGRSGFASPLVWKDDPIFLTETDPWERFRIGPGAGSFDKDPAKRKLLPGNQFPTEAYDNFLKQIVPRWLSTDKAIVAAYVALIDKVCPCVILAHSQGGHFAFLAAEQRPDKIKGMISVEPAASVRADGAKLLQDMPLLLLYGEYIEQDVR 843
            A +  + LR MGSFHVGGR  E+SG P +EIVR+ GGP SKLDPNG +  EQMY QYFL ++RKGK PLLMWHGGGLTG TYETTPDGREGW ++ +RKGWDVYV+DA ERGR+GFASP VW  +PIFL   DP+ERFRIG G GS++ D AKRK+LPGNQFP EAYDN++KQ VPRWLSTDKA+V AY+AL+DKVCPCV+L HSQGG F F  AEQR DKIK +++VE A++     A  L++ P L+L+G++++Q  R
Sbjct:   19 AGEDDIVLRGMGSFHVGGRIAEVSGRPAREIVRIPGGPPSKLDPNGEFMVEQMYVQYFLPRHRKGKLPLLMWHGGGLTGVTYETTPDGREGWLNLFVRKGWDVYVSDAVERGRAGFASPDVWPSEPIFLNYADPFERFRIGDGEGSWNADSAKRKVLPGNQFPVEAYDNYMKQTVPRWLSTDKAVVDAYLALVDKVCPCVLLLHSQGGAFGFKVAEQRSDKIKAIVAVESASAGDVGKAAALKNTPTLMLFGDHVDQHPR 278          
BLAST of mRNA_P-wetherbeei_contig18985.1.1 vs. uniprot
Match: A0A3S4DEE2_9HYPH (Uncharacterized protein n=2 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A3S4DEE2_9HYPH)

HSP 1 Score: 362 bits (929), Expect = 4.350e-122
Identity = 166/261 (63.60%), Postives = 204/261 (78.16%), Query Frame = 1
Query:   61 AAAQQPMALRDMGSFHVGGRKVEISGLPVKEIVRVAGGPTSKLDPNGTYHAEQMYAQYFLVQNRKGKWPLLMWHGGGLTGATYETTPDGREGWRDMMIRKGWDVYVTDATERGRSGFASPLVWKDDPIFLTETDPWERFRIGPGAGSFDKDPAKRKLLPGNQFPTEAYDNFLKQIVPRWLSTDKAIVAAYVALIDKVCPCVILAHSQGGHFAFLAAEQRPDKIKGMISVEPAASVRADGAKLLQDMPLLLLYGEYIEQDVR 843
            AAA+ P+ LRDMGSFH+GGR VE++G P +E+V  AGG  +K+DPNG Y  EQMY QYFL QNRKGK PLLMWHGGGLTG T+ETTPDGR+GW +M +RKGWDVY +DA ERGRSGF SP +W   PIFLT+ +P+ERFRIG G GS+  DPAK K+LPG+QFP EAYD+F+KQ VPRWL +D  IVAAY  L+ KVCPCVIL HSQ G FAF  A+  PDK+K ++++EPA       A  L+D+P+L+++G+YIEQD R
Sbjct:   45 AAAKAPLVLRDMGSFHIGGRTVEVTGKPTREVVFAAGGTPAKMDPNGPYQVEQMYVQYFLPQNRKGKVPLLMWHGGGLTGVTWETTPDGRDGWLNMFVRKGWDVYNSDAVERGRSGFPSPDIWPSSPIFLTKGNPFERFRIGAGPGSWSPDPAKLKVLPGSQFPVEAYDSFVKQGVPRWLDSDAPIVAAYTELVQKVCPCVILFHSQAGGFAFRIAQAHPDKVKALVAIEPAVPGDPAKAAALKDIPILMVFGDYIEQDSR 305          
BLAST of mRNA_P-wetherbeei_contig18985.1.1 vs. uniprot
Match: A0A327KUF7_9HYPH (Esterase n=4 Tax=Rhodoplanes TaxID=29407 RepID=A0A327KUF7_9HYPH)

HSP 1 Score: 358 bits (919), Expect = 3.850e-121
Identity = 161/261 (61.69%), Postives = 206/261 (78.93%), Query Frame = 1
Query:   61 AAAQQPMALRDMGSFHVGGRKVEISGLPVKEIVRVAGGPTSKLDPNGTYHAEQMYAQYFLVQNRKGKWPLLMWHGGGLTGATYETTPDGREGWRDMMIRKGWDVYVTDATERGRSGFASPLVWKDDPIFLTETDPWERFRIGPGAGSFDKDPAKRKLLPGNQFPTEAYDNFLKQIVPRWLSTDKAIVAAYVALIDKVCPCVILAHSQGGHFAFLAAEQRPDKIKGMISVEPAASVRADGAKLLQDMPLLLLYGEYIEQDVR 843
            AA ++P+ALRDMGSFH+GGR VE++G PV+E++  AGG  +K+DPNG Y  EQMY QYF   NRKGK+PLLMWHGGGLTG TYETTPDGR+GW +M +RKGWDVY +DA ERGRSG+ SP VW   PIFL   + +ERFRIG G GS+  DPAK K+LPG+QFP EAYDNF++Q VPRWL +DK I+AAY  L++KVCPCVIL HSQ G FAF  A++ PDK+K +++VEPA     + A  L+++P+L+++G++I+QD R
Sbjct:    6 AAKKEPIALRDMGSFHIGGRIVEVTGKPVREVLFAAGGTPAKMDPNGPYQVEQMYVQYFFPANRKGKYPLLMWHGGGLTGVTYETTPDGRDGWLNMFVRKGWDVYNSDAVERGRSGYPSPDVWPSSPIFLARGNAFERFRIGQGPGSWSPDPAKLKVLPGSQFPVEAYDNFVRQNVPRWLDSDKPIIAAYTELVEKVCPCVILFHSQAGGFAFKVAQEHPDKVKALVAVEPAVPGDPEKAAALKNVPILMVFGDFIKQDSR 266          
BLAST of mRNA_P-wetherbeei_contig18985.1.1 vs. uniprot
Match: W3RJX0_9BRAD (Esterase n=1 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RJX0_9BRAD)

HSP 1 Score: 357 bits (916), Expect = 2.160e-120
Identity = 170/259 (65.64%), Postives = 202/259 (77.99%), Query Frame = 1
Query:   70 QQPMALRDMGSFHVGGRKVEISGLPVKEIVRVAGGPTSKLDPNGTYHAEQMYAQYFLVQNRKGKWPLLMWHGGGLTGATYETTPDGREGWRDMMIRKGWDVYVTDATERGRSGFAS-PLVWKDDPIFLTETDPWERFRIGPGAGSFDKDPAKRKLLPGNQFPTEAYDNFLKQIVPRWLSTDKAIVAAYVALIDKVCPCVILAHSQGGHFAFLAAEQRPDKIKGMISVEPAASVRADGAKLLQDMPLLLLYGEYIEQDVR 843
            Q+P+ALR MGSFH+GGR VEISG PVKE+   AGG  +K+DPNGTY  EQMY QYFL    +G  PLLMWHGGGLTG TYETTPDGREGW  M +RKGW VY +DA ERGRSG+A  P ++K +P+FLT  +P+ERFRIG G GS+D DPAKRKLLPGNQFP E Y+NF+KQ VPRW +TD AI+AAY+A IDKVCPCVIL HSQ G F F AA+ RPDKIK +++VEPA       A +L+ +P L++YG+YIEQD R
Sbjct:   26 QEPIALRGMGSFHIGGRLVEISGKPVKEVTFTAGGVPAKVDPNGTYQVEQMYVQYFLPAKERGTVPLLMWHGGGLTGVTYETTPDGREGWLTMFLRKGWAVYNSDAVERGRSGWAQYPDIFKGEPVFLTTANPFERFRIGAGPGSYDPDPAKRKLLPGNQFPNEGYENFVKQNVPRWTTTDDAILAAYLAEIDKVCPCVILFHSQAGTFGFKAAQARPDKIKALVAVEPAGVGDIAKADVLKAIPTLMIYGDYIEQDSR 284          
BLAST of mRNA_P-wetherbeei_contig18985.1.1 vs. uniprot
Match: UPI00184B8DCB (Esterase n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI00184B8DCB)

HSP 1 Score: 353 bits (907), Expect = 2.550e-119
Identity = 159/262 (60.69%), Postives = 203/262 (77.48%), Query Frame = 1
Query:   58 GAAAQQPMALRDMGSFHVGGRKVEISGLPVKEIVRVAGGPTSKLDPNGTYHAEQMYAQYFLVQNRKGKWPLLMWHGGGLTGATYETTPDGREGWRDMMIRKGWDVYVTDATERGRSGFASPLVWKDDPIFLTETDPWERFRIGPGAGSFDKDPAKRKLLPGNQFPTEAYDNFLKQIVPRWLSTDKAIVAAYVALIDKVCPCVILAHSQGGHFAFLAAEQRPDKIKGMISVEPAASVRADGAKLLQDMPLLLLYGEYIEQDVR 843
            G+A ++P+ALRDMGSFH+GGR VE++G PV+E+V  AGG  +K+DPNG Y  EQMY QYFL  NRKGK PLLMWHGGGLTG TYETTPDGR+GW +M +RKGWDVY +DA ERGRSG+  P +W   P+FLT  + +ERFRIG GAGS++ DPAK K +PG+QFP EAYDNF++Q VPRWL +D  I+AAY  L+ KVCPCV+L HSQ G FAF  A+  PDK+K +++VEPA     + A  L+ +P+L+++G+YI +D R
Sbjct:    5 GSAKKEPIALRDMGSFHIGGRIVEVAGKPVREVVFAAGGTPAKMDPNGPYQVEQMYVQYFLPANRKGKVPLLMWHGGGLTGVTYETTPDGRDGWLNMFVRKGWDVYNSDAVERGRSGYPGPDIWPSSPVFLTRGNAFERFRIGQGAGSWNADPAKMKAMPGSQFPVEAYDNFVRQGVPRWLDSDGPIIAAYTELVQKVCPCVLLFHSQAGGFAFKIAQAHPDKVKALVAVEPAVPGDPEKAAALKTVPILMVFGDYINEDSR 266          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18985.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N7GTN5_9HYPH7.200e-16780.95Esterase n=1 Tax=Hyphomicrobiales bacterium TaxID=... [more]
A0A1H4LZI4_9HYPH7.100e-15173.67Uncharacterized protein n=2 Tax=Hyphomicrobiales T... [more]
A0A127F676_9HYPH6.680e-12763.87Hydrolase/carboxylic esterase n=1 Tax=Rhodoplanes ... [more]
A0A345ZYB2_9HYPH6.680e-12767.18Esterase n=1 Tax=Pseudolabrys taiwanensis TaxID=33... [more]
A0A537L6P6_9PROT2.610e-12665.64Esterase n=1 Tax=Alphaproteobacteria bacterium Tax... [more]
A0A537VWW6_9PROT4.590e-12565.38Esterase n=1 Tax=Alphaproteobacteria bacterium Tax... [more]
A0A3S4DEE2_9HYPH4.350e-12263.60Uncharacterized protein n=2 Tax=Rhodoplanes piscin... [more]
A0A327KUF7_9HYPH3.850e-12161.69Esterase n=4 Tax=Rhodoplanes TaxID=29407 RepID=A0A... [more]
W3RJX0_9BRAD2.160e-12065.64Esterase n=1 Tax=Afipia sp. P52-10 TaxID=1429916 R... [more]
UPI00184B8DCB2.550e-11960.69Esterase n=1 Tax=Rhodoplanes sp. TaxID=1968906 Rep... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18985contigP-wetherbeei_contig18985:470..1312 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1429916.X566_07120
Model size843
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.54e-121
EggNOG OGsCOG0400@1|root,COG0400@2|Bacteria,1NXXX@1224|Proteobacteria,2UW6X@28211|Alphaproteobacteria,3JX5B@41294|Bradyrhizobiaceae
DescriptionAlpha beta hydrolase
Cds size843
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186160.715894-CDS-P-wetherbeei_contig18985:469..13121683186160.715894-CDS-P-wetherbeei_contig18985:469..1312Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18985 470..1312 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18985.1.1prot_P-wetherbeei_contig18985.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18985 470..1312 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18985.1.1

>prot_P-wetherbeei_contig18985.1.1 ID=prot_P-wetherbeei_contig18985.1.1|Name=mRNA_P-wetherbeei_contig18985.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp
VRRSTLATLAVIAGSFSAAGAAAQQPMALRDMGSFHVGGRKVEISGLPVK
EIVRVAGGPTSKLDPNGTYHAEQMYAQYFLVQNRKGKWPLLMWHGGGLTG
ATYETTPDGREGWRDMMIRKGWDVYVTDATERGRSGFASPLVWKDDPIFL
TETDPWERFRIGPGAGSFDKDPAKRKLLPGNQFPTEAYDNFLKQIVPRWL
STDKAIVAAYVALIDKVCPCVILAHSQGGHFAFLAAEQRPDKIKGMISVE
PAASVRADGAKLLQDMPLLLLYGEYIEQDVR
back to top

mRNA from alignment at P-wetherbeei_contig18985:470..1312+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18985.1.1 ID=mRNA_P-wetherbeei_contig18985.1.1|Name=mRNA_P-wetherbeei_contig18985.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig18985:470..1312+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCGTCGTTCAACTCTTGCTACACTTGCCGTGATCGCCGGAAGTTTCTC GGCAGCAGGTGCGGCTGCCCAGCAGCCGATGGCGCTGCGAGACATGGGCT CGTTTCATGTCGGCGGCCGGAAAGTGGAAATCAGCGGTCTGCCGGTGAAG GAGATCGTGCGAGTCGCCGGTGGTCCGACATCGAAACTCGATCCCAACGG CACCTATCATGCCGAGCAGATGTACGCCCAATACTTCCTCGTGCAGAACC GCAAGGGCAAATGGCCATTGCTGATGTGGCACGGCGGCGGACTGACGGGG GCCACGTACGAGACGACGCCGGACGGCCGTGAAGGCTGGCGCGACATGAT GATCCGCAAGGGGTGGGACGTCTATGTCACCGATGCCACCGAGCGTGGCC GGTCCGGATTTGCTTCGCCGCTGGTGTGGAAGGACGATCCGATCTTCCTG ACCGAGACCGACCCATGGGAGCGCTTCCGCATCGGTCCTGGCGCTGGGTC GTTCGACAAGGATCCGGCAAAGCGCAAGCTCCTGCCCGGCAACCAGTTCC CAACCGAGGCCTACGACAACTTCCTGAAGCAAATCGTGCCGCGCTGGCTA TCGACCGACAAGGCGATCGTCGCGGCGTACGTGGCCCTGATCGACAAGGT GTGCCCTTGTGTAATCCTGGCGCATAGCCAAGGCGGCCACTTCGCCTTCC TCGCCGCAGAGCAGCGCCCCGACAAGATCAAGGGAATGATCTCCGTCGAG CCCGCTGCGTCGGTTAGAGCCGATGGGGCAAAGCTGTTGCAGGACATGCC ACTGCTTCTCCTCTACGGCGAATATATCGAGCAGGACGTGCGC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig18985:470..1312+

>mRNA_P-wetherbeei_contig18985.1.1 ID=mRNA_P-wetherbeei_contig18985.1.1|Name=mRNA_P-wetherbeei_contig18985.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig18985:470..1312+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCGTCGTTCAACTCTTGCTACACTTGCCGTGATCGCCGGAAGTTTCTC
GGCAGCAGGTGCGGCTGCCCAGCAGCCGATGGCGCTGCGAGACATGGGCT
CGTTTCATGTCGGCGGCCGGAAAGTGGAAATCAGCGGTCTGCCGGTGAAG
GAGATCGTGCGAGTCGCCGGTGGTCCGACATCGAAACTCGATCCCAACGG
CACCTATCATGCCGAGCAGATGTACGCCCAATACTTCCTCGTGCAGAACC
GCAAGGGCAAATGGCCATTGCTGATGTGGCACGGCGGCGGACTGACGGGG
GCCACGTACGAGACGACGCCGGACGGCCGTGAAGGCTGGCGCGACATGAT
GATCCGCAAGGGGTGGGACGTCTATGTCACCGATGCCACCGAGCGTGGCC
GGTCCGGATTTGCTTCGCCGCTGGTGTGGAAGGACGATCCGATCTTCCTG
ACCGAGACCGACCCATGGGAGCGCTTCCGCATCGGTCCTGGCGCTGGGTC
GTTCGACAAGGATCCGGCAAAGCGCAAGCTCCTGCCCGGCAACCAGTTCC
CAACCGAGGCCTACGACAACTTCCTGAAGCAAATCGTGCCGCGCTGGCTA
TCGACCGACAAGGCGATCGTCGCGGCGTACGTGGCCCTGATCGACAAGGT
GTGCCCTTGTGTAATCCTGGCGCATAGCCAAGGCGGCCACTTCGCCTTCC
TCGCCGCAGAGCAGCGCCCCGACAAGATCAAGGGAATGATCTCCGTCGAG
CCCGCTGCGTCGGTTAGAGCCGATGGGGCAAAGCTGTTGCAGGACATGCC
ACTGCTTCTCCTCTACGGCGAATATATCGAGCAGGACGTGCGC
back to top