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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2834 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Cds size | 2262 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186160.0790343-UTR-P-wetherbeei_contig1896:1..70 | 1683186160.0790343-UTR-P-wetherbeei_contig1896:1..70 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1896 2..70 + |
| 1683186160.0966835-UTR-P-wetherbeei_contig1896:2332..2835 | 1683186160.0966835-UTR-P-wetherbeei_contig1896:2332..2835 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1896 2333..2835 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186160.087782-CDS-P-wetherbeei_contig1896:70..2332 | 1683186160.087782-CDS-P-wetherbeei_contig1896:70..2332 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1896 71..2332 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1896.1.1 >prot_P-wetherbeei_contig1896.1.1 ID=prot_P-wetherbeei_contig1896.1.1|Name=mRNA_P-wetherbeei_contig1896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=754bp
MAPFPGDNSGVSLSLPVTHEAAAPLLGALRTAHLRFGERASIELLLLGKE
RLQSDDAGFVRDAEAAEVATAAARAAAAAAAAEDDKQARLWRRVLGGMVE
WRGRLSFPSDPAAAAAPATTTPTAVAASAAVALPGLSLRRKEPCGLLPPL
AACSAFEAVGAVPTSALVRNGHLLASASPAFEVVAEGGSAAARWMRDWPV
DHALIVRATASGGASCSSENGGDTVCMAWYPKRTDDAGNVAAVINGAAGS
SSCRWLALRLTAPPSISAAAAMATTIWPADCYCGAATGKNLDGGSLESAG
APTAAVRTALAHLPIFSATAELAAEARWLETCVGNLQMPIAGAASDDGGK
KRRQKQPPPAATSADGPSLEALVAARHTGTGGVDPAREAAAVAAEGGKAE
EAALLAEFQAAQREPAAAAAIYSTAGLWLGAAGPMVWPEQAALRCTGAAA
GGKEADGGAGTDGGRSSGGDGGGAGTAMLVPAGDGGALPSLPAAGIELPA
AEGGKAARTELPLAPLPLGRRQEQLRMRAATVPGAEPGPQRCSPRRGSGQ
AQLPPRSSSSSSSAAAEMTARPTLAHKLSRGAMLHAAAAPRQPPPAAAGK
SGATTKPERAKAPMRPARRLQPAKRSLSLPAPHSGDRPAAVGMSASSSQN
VDIGAACGGGDICLDFGGSERNGGGGSRDGGRGGGGNSRDGSGTAAAGHD
SDAAELEQLQKTAIAARLGVDPSHPTVQRRYAELITSLFGSLAPTAAQNG
TGD* back to topmRNA from alignment at P-wetherbeei_contig1896:2..2835+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1896.1.1 ID=mRNA_P-wetherbeei_contig1896.1.1|Name=mRNA_P-wetherbeei_contig1896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2834bp|location=Sequence derived from alignment at P-wetherbeei_contig1896:2..2835+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCGTCTCCGTGGCCGACGTCATCGCGGCTGCGCCCTCCTCCTGCCT
CCTCGACATTGTCTGGGCAATGGCGCCGTTTCCTGGCGACAACAGCGGCG
TCTCTTTGTCGCTCCCCGTAACGCACGAAGCTGCAGCTCCGCTGTTGGGG
GCTCTGCGGACAGCGCATCTGCGCTTCGGCGAGAGAGCATCGATAGAGCT
GCTGCTGCTTGGAAAGGAACGGCTTCAGTCCGACGATGCTGGCTTCGTGA
GGGATGCTGAGGCGGCGGAGGTCGCGACAGCAGCAGCAAGAGCAGCAGCA
GCAGCAGCAGCAGCCGAGGACGACAAGCAGGCGCGGCTCTGGCGTCGCGT
CCTGGGCGGAATGGTGGAGTGGCGCGGGCGACTCTCTTTTCCTAGTGATC
CGGCCGCGGCAGCAGCGCCAGCGACGACAACCCCGACTGCCGTGGCAGCT
TCAGCAGCGGTGGCTCTGCCGGGCCTGAGCCTGCGCCGAAAGGAGCCTTG
CGGGCTGCTTCCGCCGCTGGCAGCGTGTAGTGCATTTGAGGCCGTGGGAG
CCGTGCCGACGTCTGCGCTTGTCCGGAATGGTCACCTGCTGGCGTCGGCA
TCGCCGGCTTTCGAAGTTGTCGCCGAGGGCGGCAGCGCTGCGGCCCGCTG
GATGAGAGACTGGCCTGTGGATCACGCGCTCATTGTACGGGCCACGGCAT
CCGGCGGCGCCAGCTGCAGCAGCGAGAATGGCGGCGACACGGTTTGCATG
GCATGGTACCCCAAAAGGACCGACGATGCCGGTAACGTTGCCGCCGTCAT
CAACGGCGCCGCAGGATCCAGCTCGTGCCGATGGCTTGCGCTTCGATTGA
CCGCGCCGCCGTCCATTTCTGCTGCGGCTGCCATGGCGACCACGATCTGG
CCGGCCGACTGCTATTGCGGCGCGGCGACGGGCAAAAACCTGGACGGCGG
CAGTCTTGAGTCGGCCGGAGCGCCGACCGCGGCGGTGAGAACCGCGCTCG
CACACCTGCCCATTTTCTCCGCGACAGCGGAACTGGCGGCTGAGGCGCGC
TGGTTGGAGACTTGTGTGGGCAATCTGCAGATGCCGATTGCTGGCGCGGC
GTCCGACGACGGCGGAAAGAAGCGCCGCCAAAAGCAGCCGCCGCCAGCCG
CCACTTCAGCCGATGGCCCTTCCTTAGAAGCCCTCGTGGCCGCGCGCCAT
ACCGGCACCGGCGGCGTTGACCCTGCACGTGAGGCGGCAGCTGTGGCGGC
AGAAGGCGGAAAGGCGGAGGAGGCGGCCCTGCTTGCGGAGTTTCAAGCGG
CGCAACGAGAGCCGGCGGCCGCCGCTGCCATCTACTCTACGGCTGGACTA
TGGCTCGGGGCGGCGGGGCCGATGGTTTGGCCAGAGCAGGCGGCGCTGCG
GTGCACGGGTGCCGCGGCCGGCGGCAAAGAGGCCGATGGCGGAGCCGGCA
CCGATGGCGGGAGGAGCAGCGGCGGCGACGGCGGCGGCGCGGGGACGGCC
ATGCTGGTGCCAGCGGGAGACGGCGGAGCGCTACCATCGCTGCCGGCGGC
GGGTATTGAACTGCCCGCTGCCGAAGGCGGGAAGGCGGCGCGAACAGAGC
TGCCGCTGGCGCCGCTGCCGCTGGGCCGAAGACAGGAACAGCTGCGGATG
CGGGCAGCGACCGTGCCAGGTGCCGAACCAGGACCGCAGCGATGTTCGCC
GCGCCGAGGCAGCGGACAGGCACAGCTACCGCCACGGTCGTCATCGTCAT
CTTCGTCAGCAGCGGCGGAAATGACGGCGCGTCCAACTCTGGCCCACAAG
CTGTCCCGCGGCGCCATGCTCCACGCTGCCGCTGCACCACGTCAACCGCC
TCCAGCAGCGGCTGGAAAAAGCGGCGCAACGACCAAACCGGAGAGAGCGA
AGGCGCCCATGAGGCCGGCGCGGCGGCTGCAGCCTGCCAAGCGCTCACTG
TCGCTGCCGGCGCCGCACAGCGGGGACAGGCCAGCAGCCGTAGGGATGAG
CGCTTCCTCTTCTCAAAACGTCGACATCGGAGCGGCTTGCGGCGGCGGTG
ACATCTGCCTGGATTTCGGCGGCAGCGAGCGCAATGGTGGCGGCGGCAGT
AGAGACGGCGGCCGCGGGGGCGGCGGTAACAGCAGGGACGGCAGCGGGAC
CGCTGCCGCCGGCCACGATTCTGACGCGGCGGAGCTGGAGCAGCTCCAAA
AGACCGCTATCGCGGCGCGCCTCGGGGTGGATCCATCGCACCCGACGGTG
CAGCGCCGCTACGCCGAGCTCATCACCAGCCTCTTTGGCAGCTTGGCGCC
GACGGCGGCGCAAAACGGAACGGGCGATTGACGAATGGCTGGATGAAATT
GACTGAACTCTATCCAGCACGCGAGGTAGGGGAAAAGGACACTATGCACC
ATTGCCTTCCGTCCCGTGTCTTGGCCTTTCGTCGCTTGGAAGTTGACCGG
GGTCTTCTGCACATCTCGTACATGGCTCAGCCAATCCAGCCGGCATTCGC
TGCCAAGTTTCCCCACCGGCCCCCAGGCTACCACTCCCCGCCCGTGCCCT
AGCTTCGCCCCGCCGGCCGCGGCTCTAAGAGCGATCCGCTAAATATGGCG
GGAGGGAGGGTGGTATGGGTGCGTGCACGATGAGCAGCATTGTCCCCTAC
GCCCCCACCTTGCCTCTCCCCCTTCAACCATGGGGGTGATGGCACAGACC
CAAACGGTAAATGGGCAAGTACGTGCGTTGCTGGGAAAAGATTGACAGCG
TCCCCGTCACCGGGTTGGGGCAAGTGACGGGTGTTGAAATCGCGGGTGAA
TGTCAGTTAGGGCCACGGCGAAAGGGCATTGGAG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1896:2..2835+ >mRNA_P-wetherbeei_contig1896.1.1 ID=mRNA_P-wetherbeei_contig1896.1.1|Name=mRNA_P-wetherbeei_contig1896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2262bp|location=Sequence derived from alignment at P-wetherbeei_contig1896:2..2835+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGCCGTTTCCTGGCGACAACAGCGGCGTCTCTTTGTCGCTCCCCGT
AACGCACGAAGCTGCAGCTCCGCTGTTGGGGGCTCTGCGGACAGCGCATC
TGCGCTTCGGCGAGAGAGCATCGATAGAGCTGCTGCTGCTTGGAAAGGAA
CGGCTTCAGTCCGACGATGCTGGCTTCGTGAGGGATGCTGAGGCGGCGGA
GGTCGCGACAGCAGCAGCAAGAGCAGCAGCAGCAGCAGCAGCAGCCGAGG
ACGACAAGCAGGCGCGGCTCTGGCGTCGCGTCCTGGGCGGAATGGTGGAG
TGGCGCGGGCGACTCTCTTTTCCTAGTGATCCGGCCGCGGCAGCAGCGCC
AGCGACGACAACCCCGACTGCCGTGGCAGCTTCAGCAGCGGTGGCTCTGC
CGGGCCTGAGCCTGCGCCGAAAGGAGCCTTGCGGGCTGCTTCCGCCGCTG
GCAGCGTGTAGTGCATTTGAGGCCGTGGGAGCCGTGCCGACGTCTGCGCT
TGTCCGGAATGGTCACCTGCTGGCGTCGGCATCGCCGGCTTTCGAAGTTG
TCGCCGAGGGCGGCAGCGCTGCGGCCCGCTGGATGAGAGACTGGCCTGTG
GATCACGCGCTCATTGTACGGGCCACGGCATCCGGCGGCGCCAGCTGCAG
CAGCGAGAATGGCGGCGACACGGTTTGCATGGCATGGTACCCCAAAAGGA
CCGACGATGCCGGTAACGTTGCCGCCGTCATCAACGGCGCCGCAGGATCC
AGCTCGTGCCGATGGCTTGCGCTTCGATTGACCGCGCCGCCGTCCATTTC
TGCTGCGGCTGCCATGGCGACCACGATCTGGCCGGCCGACTGCTATTGCG
GCGCGGCGACGGGCAAAAACCTGGACGGCGGCAGTCTTGAGTCGGCCGGA
GCGCCGACCGCGGCGGTGAGAACCGCGCTCGCACACCTGCCCATTTTCTC
CGCGACAGCGGAACTGGCGGCTGAGGCGCGCTGGTTGGAGACTTGTGTGG
GCAATCTGCAGATGCCGATTGCTGGCGCGGCGTCCGACGACGGCGGAAAG
AAGCGCCGCCAAAAGCAGCCGCCGCCAGCCGCCACTTCAGCCGATGGCCC
TTCCTTAGAAGCCCTCGTGGCCGCGCGCCATACCGGCACCGGCGGCGTTG
ACCCTGCACGTGAGGCGGCAGCTGTGGCGGCAGAAGGCGGAAAGGCGGAG
GAGGCGGCCCTGCTTGCGGAGTTTCAAGCGGCGCAACGAGAGCCGGCGGC
CGCCGCTGCCATCTACTCTACGGCTGGACTATGGCTCGGGGCGGCGGGGC
CGATGGTTTGGCCAGAGCAGGCGGCGCTGCGGTGCACGGGTGCCGCGGCC
GGCGGCAAAGAGGCCGATGGCGGAGCCGGCACCGATGGCGGGAGGAGCAG
CGGCGGCGACGGCGGCGGCGCGGGGACGGCCATGCTGGTGCCAGCGGGAG
ACGGCGGAGCGCTACCATCGCTGCCGGCGGCGGGTATTGAACTGCCCGCT
GCCGAAGGCGGGAAGGCGGCGCGAACAGAGCTGCCGCTGGCGCCGCTGCC
GCTGGGCCGAAGACAGGAACAGCTGCGGATGCGGGCAGCGACCGTGCCAG
GTGCCGAACCAGGACCGCAGCGATGTTCGCCGCGCCGAGGCAGCGGACAG
GCACAGCTACCGCCACGGTCGTCATCGTCATCTTCGTCAGCAGCGGCGGA
AATGACGGCGCGTCCAACTCTGGCCCACAAGCTGTCCCGCGGCGCCATGC
TCCACGCTGCCGCTGCACCACGTCAACCGCCTCCAGCAGCGGCTGGAAAA
AGCGGCGCAACGACCAAACCGGAGAGAGCGAAGGCGCCCATGAGGCCGGC
GCGGCGGCTGCAGCCTGCCAAGCGCTCACTGTCGCTGCCGGCGCCGCACA
GCGGGGACAGGCCAGCAGCCGTAGGGATGAGCGCTTCCTCTTCTCAAAAC
GTCGACATCGGAGCGGCTTGCGGCGGCGGTGACATCTGCCTGGATTTCGG
CGGCAGCGAGCGCAATGGTGGCGGCGGCAGTAGAGACGGCGGCCGCGGGG
GCGGCGGTAACAGCAGGGACGGCAGCGGGACCGCTGCCGCCGGCCACGAT
TCTGACGCGGCGGAGCTGGAGCAGCTCCAAAAGACCGCTATCGCGGCGCG
CCTCGGGGTGGATCCATCGCACCCGACGGTGCAGCGCCGCTACGCCGAGC
TCATCACCAGCCTCTTTGGCAGCTTGGCGCCGACGGCGGCGCAAAACGGA
ACGGGCGATTGA back to top
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