mRNA_P-wetherbeei_contig18941.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18941.1.1 vs. uniprot
Match: A0A4V0I9J1_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A4V0I9J1_9BACT) HSP 1 Score: 78.2 bits (191), Expect = 5.970e-15 Identity = 41/103 (39.81%), Postives = 57/103 (55.34%), Query Frame = 1
Query: 16 DGRFAVPAPGKAALVCPSDGTGSTLVLTGHTGHVSAVAFHPQRPRLLSAGADGTVRVWDTASGAEAGAFDWRVGPLTAVAVAPDGLSAAVAGRGGHIVTWDLD 324
D R A+ +A + P+D S +++ GH V V F P +L+AG DGT RVWD +G E +F+W VG + AV+PDG A GH+V WD+D
Sbjct: 201 DARMALVLGHRAVVWTPADLEASPVLIPGHGKTVKGVGFLPDG-NVLTAGLDGTARVWDANTGREVRSFNWGVGKVWVAAVSPDGALCAAGSDDGHVVVWDVD 302
BLAST of mRNA_P-wetherbeei_contig18941.1.1 vs. uniprot
Match: A0A6P2DI67_9BACT (Uncharacterized protein n=1 Tax=Gemmata massiliana TaxID=1210884 RepID=A0A6P2DI67_9BACT) HSP 1 Score: 73.9 bits (180), Expect = 2.310e-13 Identity = 38/75 (50.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 100 GHTGHVSAVAFHPQRPRLLSAGADGTVRVWDTASGAEAGAFDWRVGPLTAVAVAPDGLSAAVAGRGGHIVTWDLD 324
GHT V + F P RL SA DGTVRVWD ASG + AF ++GPL V APDGL+ A + + GHI D+D
Sbjct: 234 GHTKRVDCIEFSPDGTRLASAANDGTVRVWDVASGGQLRAFHPKLGPLHWVTFAPDGLTLAFSSQKGHIGLLDMD 308
BLAST of mRNA_P-wetherbeei_contig18941.1.1 vs. uniprot
Match: A0A6M5YI17_9BACT (Uncharacterized protein n=1 Tax=Frigoriglobus tundricola TaxID=2774151 RepID=A0A6M5YI17_9BACT) HSP 1 Score: 67.4 bits (163), Expect = 5.530e-11 Identity = 38/82 (46.34%), Postives = 46/82 (56.10%), Query Frame = 1
Query: 79 GSTLVLTGHTGHVSAVAFHPQRPRLLSAGADGTVRVWDTASGAEAGAFDWRVGPLTAVAVAPDGLSAAVAGRGGHIVTWDLD 324
G L GHT VS V F L+SAG DGT+R+WD A+GAE D +G L +A APDGL+ A GH+ DLD
Sbjct: 222 GKPRELRGHTKRVSCVEFATDGATLVSAGDDGTLRLWDVATGAERRVLDPGLGALHWLAFAPDGLTLAFTSDKGHLGVLDLD 303
BLAST of mRNA_P-wetherbeei_contig18941.1.1 vs. uniprot
Match: A0A7C4UI51_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4UI51_9BACT) HSP 1 Score: 67.4 bits (163), Expect = 5.870e-11 Identity = 34/105 (32.38%), Postives = 55/105 (52.38%), Query Frame = 1
Query: 10 SADGRFAVPAPGKAALVCPSDGTGSTLVLTGHTGHVSAVAFHPQRPRLLSAGADGTVRVWDTASGAEAGAFDWRVGPLTAVAVAPDGLSAAVAGRGGHIVTWDLD 324
S DGR G + + L H G V+++AF+ ++++ D +VR+WD ++G + W +GP+ AVA++ D L+AA GH+V WDLD
Sbjct: 210 SPDGRLLACTAGAHVALWDVEERRQIHALISHAGMVTSMAFNATGSQIITGSHDRSVRMWDVSTGRLLRTYRWPIGPVLAVALSQDELTAAAGDNAGHVVLWDLD 314
BLAST of mRNA_P-wetherbeei_contig18941.1.1 vs. uniprot
Match: A0A1Q9U4P8_9ACTN (Uncharacterized protein n=1 Tax=Actinomadura sp. CNU-125 TaxID=1904961 RepID=A0A1Q9U4P8_9ACTN) HSP 1 Score: 65.1 bits (157), Expect = 5.600e-10 Identity = 44/103 (42.72%), Postives = 55/103 (53.40%), Query Frame = 1
Query: 43 GKAALVCPSDGTGSTLVLTGHTGHVSAVAFHPQ---RPRLLSAGADGTVRVWDTASGAEAGAFDWR------VGPLTAVAVAPDGLSAAVAGRGGHIVTWDLD 324
G+ L+ P G S LTGH GHV+A+A P R RL+SAG DGT+R+WD G G W +GPL AVAV DG AG ++ WD+D
Sbjct: 438 GRIRLLDPLTGEPSGDPLTGHIGHVTALAALPPAQGRTRLVSAGDDGTMRIWDPLGG---GGTRWTRKRNAGLGPLGAVAVV-DGALLVTAGTDERLLVWDVD 536
BLAST of mRNA_P-wetherbeei_contig18941.1.1 vs. uniprot
Match: A0A7C2LV12_9HYPH (Serine/threonine protein kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LV12_9HYPH) HSP 1 Score: 64.3 bits (155), Expect = 1.040e-9 Identity = 42/103 (40.78%), Postives = 53/103 (51.46%), Query Frame = 1
Query: 16 DGRFAVPAPGKAALVCPSDGTGSTLVLTGHTGHVSAVAFHPQRPRLLSAGADGTVRVWDTASGAEAGAFDWRVGPLTAVAVAPDGLSAAVAGRGGHIVTWDLD 324
+GR A A V PS + + GH G V+A+ Q L+SAG DGT+R+W ASGA + GP TA+AV D A +GG IV WDLD
Sbjct: 493 EGRGAGVVSSHAVEVAPS------IRVAGHRGPVTAIGTGDQGRWLISAGTDGTLRLWSAASGAHVRTIELDEGPATALAV--DDRRALTGHKGGTIVLWDLD 587
BLAST of mRNA_P-wetherbeei_contig18941.1.1 vs. uniprot
Match: A0A6I7YUN2_9ACTN (Non-specific serine/threonine protein kinase n=3 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A6I7YUN2_9ACTN) HSP 1 Score: 62.8 bits (151), Expect = 3.720e-9 Identity = 40/85 (47.06%), Postives = 46/85 (54.12%), Query Frame = 1
Query: 94 LTGHTGHVSAVAFHPQRPRLLSAGADGTVRVWDTAS---------GAEAGAFDWRVGPLTAVAVAPDGLSAAVAGRGGHIVTWDL 321
LTGH G V AVA +L+ GADG RVWDTA+ GA D V P+TAVAVAPDG + V R G + WDL
Sbjct: 539 LTGHQGEVGAVAVDATGTVVLTGGADGRARVWDTATSRCRYELPPGAAGTLHDHPV-PVTAVAVAPDGRAGLVGHRYGPVELWDL 622
BLAST of mRNA_P-wetherbeei_contig18941.1.1 vs. uniprot
Match: A0A6M5YK42_9BACT (Uncharacterized protein n=2 Tax=Frigoriglobus tundricola TaxID=2774151 RepID=A0A6M5YK42_9BACT) HSP 1 Score: 62.0 bits (149), Expect = 4.740e-9 Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 91 VLTGHTGHVSAVAFHPQRPRLLSAGADGTVRVWDTASGAEAGAFDWRVGPLTAVAV 258
V GHT ++ A+ F P L+SAGADG VRVWD A+G + +FDW +G + A AV
Sbjct: 218 VFRGHTNYIHALGFMPDGRALVSAGADGVVRVWDAATGTQTRSFDWGIGKVCAAAV 273
BLAST of mRNA_P-wetherbeei_contig18941.1.1 vs. uniprot
Match: A0A5C9CC12_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A5C9CC12_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 1.690e-8 Identity = 27/76 (35.53%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 94 LTGHTGHVSAVAFHPQRPRLLSAGADGTVRVWDTASGAEAGAFDWRVGPLTAVAVAPDGLSAAVAGRGGHIVTWDL 321
L+GHTG+++ +AFHP +L+S D ++R WD SG+ G+ + P T +++APDG + G + W L
Sbjct: 382 LSGHTGYITQLAFHPAGHQLISTSRDNSIRFWDAESGSALGSQPGALIPSTCLSIAPDGHQFCTSDNRGEMQVWRL 457
BLAST of mRNA_P-wetherbeei_contig18941.1.1 vs. uniprot
Match: UPI001993BCF3 (Uncharacterized protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=UPI001993BCF3) HSP 1 Score: 60.5 bits (145), Expect = 2.390e-8 Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 1
Query: 94 LTGHTGHVSAVAFHPQRPRLLSAGADGTVRVWDTASGAEAGAFDW--RVGPLTAVAVAPDGLSAAVAGRGGHIVTWD 318
L GH G VS++AFHP PRL SAGADGTVR+W A + W P+T +A++ DG +A A + W+
Sbjct: 291 LAGHIGAVSSLAFHPTEPRLASAGADGTVRIWRL----PAISVPWPGHTQPVTVLAMSKDGKTAVTAATDKSVRIWN 363 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18941.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18941.1.1 >prot_P-wetherbeei_contig18941.1.1 ID=prot_P-wetherbeei_contig18941.1.1|Name=mRNA_P-wetherbeei_contig18941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp IAASADGRFAVPAPGKAALVCPSDGTGSTLVLTGHTGHVSAVAFHPQRPRback to top mRNA from alignment at P-wetherbeei_contig18941:937..1266- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18941.1.1 ID=mRNA_P-wetherbeei_contig18941.1.1|Name=mRNA_P-wetherbeei_contig18941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig18941:937..1266- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18941:937..1266- >mRNA_P-wetherbeei_contig18941.1.1 ID=mRNA_P-wetherbeei_contig18941.1.1|Name=mRNA_P-wetherbeei_contig18941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig18941:937..1266- (Phaeothamnion wetherbeei SAG_119_79)back to top |