mRNA_P-wetherbeei_contig1889.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig1889.1.2
Unique Name	mRNA_P-wetherbeei_contig1889.1.2
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

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BLAST of mRNA_P-wetherbeei_contig1889.1.2 vs. uniprot
Match: D8LPR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR2_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 8.500e-95
Identity = 158/319 (49.53%), Postives = 204/319 (63.95%), Query Frame = 2

Query:  707 IVHRRELLETYIKWHTDRGLAPTLAELLASPSRHPKAAVEATNSLFAAAAFSXXXXXXXXXXVATGRRSLADAAPGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVTVILNVYEREVLPDQLAALLRQTAAARLSEVWVCVFSAPAEAAALRAVRGAGXXXXXXGVRMRVVVSDYNFKFYGRFQVALTAPTDFVWLLDDDMLPGKEHLANLIHAAGTDLLGQSVLGSIGRVLPRPHSDMRLDSYRTWGPHGGLYLPDYYFDMANQERAVPVDYLCSQWFLRPEWLQHMWAERPQTFATGEDFHLSYTLGQFGHLGT 1663
            ++ ++  L+ Y+ WH  +GLAP+L E+++ PS + + AVE                         GR      AP                                 VTVILN++ REVL +QL +L  QT A+ ++EVWVCVFSAPA+  ALR V+ +          +R+VVSD+NFKFYGRFQ+ALTAPTDFVWL+DDDM+PG ++L  L+HAAGT+LLG S+LGSIGRVLPRP  DM L SYR WG HGG+Y+PDYY+D   Q+ AVPVDYLCSQWFLRPEWLQHMW+ERP TF TGEDFH+S+T+ ++ ++GT
Sbjct:  179 LLRQKNQLDAYVAWHRQQGLAPSLDEMMSMPSTNERWAVE-------------------------GRTGGLKGAP--------------------------------KVTVILNLFMREVLTEQLDSLFAQTTASHIAEVWVCVFSAPAQDYALRVVKESKYK------NVRLVVSDFNFKFYGRFQMALTAPTDFVWLIDDDMIPGNKYLGQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWD---QDSAVPVDYLCSQWFLRPEWLQHMWSERPMTFETGEDFHVSHTMRKYANIGT 431

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BLAST of mRNA_P-wetherbeei_contig1889.1.2 vs. uniprot
Match: A0A6H5KPH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH5_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 4.980e-89
Identity = 159/319 (49.84%), Postives = 203/319 (63.64%), Query Frame = 2

Query:  707 IVHRRELLETYIKWHTDRGLAPTLAELLASPSRHPKAAVEATNSLFAAAAFSXXXXXXXXXXVATGRRSLADAAPGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVTVILNVYEREVLPDQLAALLRQTAAARLSEVWVCVFSAPAEAAALRAVRGAGXXXXXXGVRMRVVVSDYNFKFYGRFQVALTAPTDFVWLLDDDMLPGKEHLANLIHAAGTDLLGQSVLGSIGRVLPRPHSDMRLDSYRTWGPHGGLYLPDYYFDMANQERAVPVDYLCSQWFLRPEWLQHMWAERPQTFATGEDFHLSYTLGQFGHLGT 1663
            ++ ++  L+ Y+ WH  +GLAP+L EL++ PS + + A E                         GR      AP                                 VTVILN++ REVL +QL +L  QT A+ ++EVWVCVFSAPA+  ALR V+ +          +R+VVSD+NFKFYGRFQ+ALTAPTDFVWL+DDDM+PG ++L  L+HAAGT+LLG S+LGSIGRVLPRP  DM L SYR WG HGG+Y+PDYY+D   Q+ AVPVDYLCSQWFLRPEWLQHMW+ERP TF TGEDFH+S+TL ++ ++GT
Sbjct:  193 LLRQKNQLDAYVAWHRQQGLAPSLDELMSMPSTNERWAQE-------------------------GRTGGLKGAP--------------------------------KVTVILNLFMREVLTEQLDSLFAQTTASHIAEVWVCVFSAPAQDYALRVVKESKYK------NVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLGQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWD---QDNAVPVDYLCSQWFLRPEWLQHMWSERPMTFETGEDFHVSHTLRKYANIGT 445

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BLAST of mRNA_P-wetherbeei_contig1889.1.2 vs. uniprot
Match: A0A1J3I729_NOCCA (Uncharacterized protein (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3I729_NOCCA)

HSP 1 Score: 169 bits (428), Expect = 7.150e-44
Identity = 96/212 (45.28%), Postives = 132/212 (62.26%), Query Frame = 2

Query: 1031 VTVILNVYEREVLPDQLAALLRQTAAARLSEVWVCVFSAPAEAAALRAVRGAGXXXXXXGVRMRVVVSDYNFKFYGRFQVALTAPTDFVWLLDDDMLPGKEHLANLIHAAGTDLLGQSVLGSIGRVLPRPHSDMRLDSYRTW-GPHGGLYLPDYYFDMANQERAVPVDYLCSQWFLRPEWLQHMWAERPQTFATGEDFHLSYTLGQFGHLGT 1663
            VTVILN ++R+ L  QL +LL QT       VWV  F +P EA+ LR + G+         R+  + S+Y+FK+YGRFQ+AL    D V+++DDDM+PGK+ L  L H AGT+    SVLGSIGR+LP    D    SYR +     GLYLPD  +D+   +R + VD+L S WFL  E ++ ++ E+P TFATGED HLSY L ++ + G+
Sbjct:   89 VTVILNHFKRKTLCAQLDSLLHQTLP--FHHVWVLAFGSPNEAS-LRRIAGS-----YNDSRISFISSNYDFKYYGRFQIALQTEADLVYVIDDDMIPGKKMLQMLSHVAGTEKYENSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDI-TLDRILQVDFLSSSWFLSAELVKALFIEKPFTFATGEDLHLSYQLQKYRNAGS 291

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BLAST of mRNA_P-wetherbeei_contig1889.1.2 vs. uniprot
Match: A0A6V2VAT5_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2VAT5_EMIHU)

HSP 1 Score: 163 bits (412), Expect = 4.100e-41
Identity = 98/209 (46.89%), Postives = 126/209 (60.29%), Query Frame = 2

Query: 1031 VTVILNVYEREVLPDQLAALLRQTAAARLSEVWVCVFSAPAEAAALRAVRGAGXXXXXXGVRMRVVVSDYNFKFYGRFQVALTAPTDFVWLLDDDMLPGKEHLANLIHAA--GTDLLGQSVLGSIGRVLPRPHSDMRLDSYR-TWGPHGGLYLPDYYFDMANQERAVPVDYLCSQWFLRPEWLQHMWAERPQTFATGEDFHLSYTLGQF 1648
            VT +LNV+ R  L  QL ALL QTA   L  +WVC F     AAAL AV            R+ ++ S+ N K+YGRFQ AL APT FV ++DDDM+PG+ HL  L+H A     L  + +LGSIG +LP P   +   SYR T    GGLY+PD  + +A  ER + VDYLCS WF   EW++ ++ E P T ATGEDFHLS+ L ++
Sbjct:   83 VTAVLNVWNRRTLCRQLEALLAQTAPPAL--IWVCAFGPTPLAAALGAV-----VSRYNDSRIVLLRSEANLKYYGRFQAALAAPTRFVAVIDDDMVPGRRHLEALLHVAMLRPPLGARRLLGSIGWLLPPPQQGLVFRSYRATENSSGGLYVPDLAYGLAV-ERLLEVDYLCSAWFGETEWVRLLFREAPLTHATGEDFHLSHMLRKY 283

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BLAST of mRNA_P-wetherbeei_contig1889.1.2 vs. uniprot
Match: Q9FF50_ARATH (Glycosyltransferase family protein 2 n=41 Tax=Brassicaceae TaxID=3700 RepID=Q9FF50_ARATH)

HSP 1 Score: 169 bits (428), Expect = 4.810e-41
Identity = 96/212 (45.28%), Postives = 132/212 (62.26%), Query Frame = 2

Query: 1031 VTVILNVYEREVLPDQLAALLRQTAAARLSEVWVCVFSAPAEAAALRAVRGAGXXXXXXGVRMRVVVSDYNFKFYGRFQVALTAPTDFVWLLDDDMLPGKEHLANLIHAAGTDLLGQSVLGSIGRVLPRPHSDMRLDSYRTW-GPHGGLYLPDYYFDMANQERAVPVDYLCSQWFLRPEWLQHMWAERPQTFATGEDFHLSYTLGQFGHLGT 1663
            VTVILN ++R+ L  QL +LL QT       VWV  F +P EA+ LR + G+         R+  + S+Y+FK+YGRFQ+AL    D V++LDDDM+PGK+ L  L H AGT+    SVLGSIGR+LP    D    SYR +     GLYLPD  +D+   +R + VD+L S WFL  E ++ ++ E+P TF+TGED HLSY L ++ + G+
Sbjct:  178 VTVILNHFKRKTLCAQLDSLLHQTLP--FHHVWVLAFGSPNEAS-LRRIAGS-----YNDSRISFISSNYDFKYYGRFQIALQTEADLVYILDDDMIPGKKMLQMLSHVAGTEKYENSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDI-TLDRILQVDFLSSSWFLSAELVKALFIEKPFTFSTGEDLHLSYQLQKYRNAGS 380

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BLAST of mRNA_P-wetherbeei_contig1889.1.2 vs. uniprot
Match: A0A426ZYP2_ENSVE (Uncharacterized protein n=5 Tax=Musaceae TaxID=4637 RepID=A0A426ZYP2_ENSVE)

HSP 1 Score: 169 bits (428), Expect = 4.980e-41
Identity = 95/212 (44.81%), Postives = 128/212 (60.38%), Query Frame = 2

Query: 1031 VTVILNVYEREVLPDQLAALLRQTAAARLSEVWVCVFSAPAEAAALRAVRGAGXXXXXXGVRMRVVVSDYNFKFYGRFQVALTAPTDFVWLLDDDMLPGKEHLANLIHAAGTDLLGQSVLGSIGRVLPRPHSDMRLDSYRTW-GPHGGLYLPDYYFDMANQERAVPVDYLCSQWFLRPEWLQHMWAERPQTFATGEDFHLSYTLGQFGHLGT 1663
            +TVILN ++R+ L  QL +LL QT       VWV  F +P+E +  R V G          R+  + S Y+FK+YGRFQ+AL    DFV++LDDDM+PGK+ L  L H AGTD    SVLGSIGR+LP    D    SYR +     GLYLPD  +D+   ++ V VD+L S WFL  + ++ ++ E P TF TGED HLSY L ++ + G+
Sbjct:  171 ITVILNHFKRKTLCAQLDSLLNQTLP--FHHVWVLSFGSPSELSLRRIVEGYNNS------RISFISSSYDFKYYGRFQMALQTEADFVYILDDDMIPGKKMLEILSHVAGTDKYRNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDI-TVDKIVQVDFLSSSWFLSADLVKTLFVETPVTFMTGEDLHLSYQLQKYRNAGS 373

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BLAST of mRNA_P-wetherbeei_contig1889.1.2 vs. uniprot
Match: A0A6P5H2H3_ANACO (uncharacterized protein LOC109728978 n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5H2H3_ANACO)

HSP 1 Score: 169 bits (427), Expect = 6.420e-41
Identity = 97/212 (45.75%), Postives = 127/212 (59.91%), Query Frame = 2

Query: 1031 VTVILNVYEREVLPDQLAALLRQTAAARLSEVWVCVFSAPAEAAALRAVRGAGXXXXXXGVRMRVVVSDYNFKFYGRFQVALTAPTDFVWLLDDDMLPGKEHLANLIHAAGTDLLGQSVLGSIGRVLPRPHSDMRLDSYRTW-GPHGGLYLPDYYFDMANQERAVPVDYLCSQWFLRPEWLQHMWAERPQTFATGEDFHLSYTLGQFGHLGT 1663
            +TVILN Y+R+ L  QL +LL QT       VWV  F +P E +  R V            R+  V S Y+FK+YGRFQ+AL   +DFV++LDDDM+PGK  L  L H  GT+    SVLGSIGR+LP    D    SYR +     GLYLPD  +D+   ER V VD+L S WFL  + ++ ++ E+P TFATGED HLSY L ++ + G+
Sbjct:  173 ITVILNHYKRKTLCAQLDSLLHQTLP--FHHVWVLSFGSPNELSLRRIVESYNNS------RISFVSSTYDFKYYGRFQMALQTESDFVYILDDDMIPGKRMLEILAHVGGTEKYKNSVLGSIGRILPFRQKDFMFPSYRKFKSKEAGLYLPDPAYDI-TVERIVQVDFLSSSWFLPTDLVKTLFIEKPFTFATGEDLHLSYQLQKYRNAGS 375

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BLAST of mRNA_P-wetherbeei_contig1889.1.2 vs. uniprot
Match: A0A6I9QBX0_ELAGV (uncharacterized protein LOC105033416 n=2 Tax=Cocoseae TaxID=169705 RepID=A0A6I9QBX0_ELAGV)

HSP 1 Score: 168 bits (425), Expect = 1.160e-40
Identity = 96/212 (45.28%), Postives = 126/212 (59.43%), Query Frame = 2

Query: 1031 VTVILNVYEREVLPDQLAALLRQTAAARLSEVWVCVFSAPAEAAALRAVRGAGXXXXXXGVRMRVVVSDYNFKFYGRFQVALTAPTDFVWLLDDDMLPGKEHLANLIHAAGTDLLGQSVLGSIGRVLPRPHSDMRLDSYRTW-GPHGGLYLPDYYFDMANQERAVPVDYLCSQWFLRPEWLQHMWAERPQTFATGEDFHLSYTLGQFGHLGT 1663
            +TVILN ++R+ L  QL +LL QT       VWV  F +P E +  R V G          R+  + S Y+FK+YGRFQ+AL    DFV++LDDDM+PGK+ L  L H  GT+    SVLGSIGR+LP    D    SYR +     GLYLPD  +D+   ER V VD+L S WFL  E ++ ++ E P TF TGED HLSY L ++ + G+
Sbjct:  170 ITVILNHFKRKTLCAQLDSLLNQTLP--FHHVWVLSFGSPNELSLKRIVEGYNNP------RISFISSSYDFKYYGRFQMALQTEADFVYILDDDMIPGKKMLEILAHVGGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITI-ERIVQVDFLSSSWFLSAELVKALFIETPVTFMTGEDLHLSYQLQKYRNAGS 372

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BLAST of mRNA_P-wetherbeei_contig1889.1.2 vs. uniprot
Match: A0A6D2KEY4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KEY4_9BRAS)

HSP 1 Score: 168 bits (425), Expect = 1.190e-40
Identity = 96/212 (45.28%), Postives = 131/212 (61.79%), Query Frame = 2

Query: 1031 VTVILNVYEREVLPDQLAALLRQTAAARLSEVWVCVFSAPAEAAALRAVRGAGXXXXXXGVRMRVVVSDYNFKFYGRFQVALTAPTDFVWLLDDDMLPGKEHLANLIHAAGTDLLGQSVLGSIGRVLPRPHSDMRLDSYRTW-GPHGGLYLPDYYFDMANQERAVPVDYLCSQWFLRPEWLQHMWAERPQTFATGEDFHLSYTLGQFGHLGT 1663
            VTVILN ++R+ L  QL +LL QT       VWV  F +P EA+ LR + G+         R+  + S+Y+FK+YGRFQ+AL    D V+++DDDM+PGK+ L  L H AGT     SVLGSIGR+LP    D    SYR +     GLYLPD  +D+   +R + VD+L S WFL  E ++ ++ E+P TFATGED HLSY L ++ + G+
Sbjct:  181 VTVILNHFKRKTLCAQLDSLLHQTLP--FHHVWVLAFGSPNEAS-LRRIAGS-----YNDSRISFISSNYDFKYYGRFQIALQTEADLVYVIDDDMIPGKKMLQMLSHVAGTGKYENSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDI-TLDRILQVDFLSSSWFLSAELVKALFIEKPFTFATGEDLHLSYQLQKYRNAGS 383

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BLAST of mRNA_P-wetherbeei_contig1889.1.2 vs. uniprot
Match: A0A444E699_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444E699_ENSVE)

HSP 1 Score: 160 bits (405), Expect = 1.200e-40
Identity = 91/200 (45.50%), Postives = 120/200 (60.00%), Query Frame = 2

Query: 1031 VTVILNVYEREVLPDQLAALLRQTAAARLSEVWVCVFSAPAEAAALRAVRGAGXXXXXXGVRMRVVVSDYNFKFYGRFQVALTAPTDFVWLLDDDMLPGKEHLANLIHAAGTDLLGQSVLGSIGRVLPRPHSDMRLDSYRTW-GPHGGLYLPDYYFDMANQERAVPVDYLCSQWFLRPEWLQHMWAERPQTFATGEDFHL 1627
            +TVILN ++R+ L  QL +LL QT       VWV  F +P+E +  R V G          R+  + S Y+FK+YGRFQ+AL    DFV++LDDDM+PGK+ L  L H AGTD    SVLGSIGR+LP    D    SYR +     GLYLPD  +D+   ++ V VD+L S WFL  + ++ ++ E P TF TGED HL
Sbjct:  171 ITVILNHFKRKTLCAQLDSLLNQTLP--FHHVWVLSFGSPSELSLRRIVEGYNNS------RISFISSSYDFKYYGRFQMALQTEADFVYILDDDMIPGKKMLEILSHVAGTDKYRNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDI-TVDKIVQVDFLSSSWFLSADLVKTLFVETPVTFMTGEDLHL 361

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig1889.1.2 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig1889.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LPR2_ECTSI	8.500e-95	49.53	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KPH5_9PHAE	4.980e-89	49.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A1J3I729_NOCCA	7.150e-44	45.28	Uncharacterized protein (Fragment) n=1 Tax=Noccaea...	[more]
A0A6V2VAT5_EMIHU	4.100e-41	46.89	Hypothetical protein n=1 Tax=Emiliania huxleyi Tax...	[more]
Q9FF50_ARATH	4.810e-41	45.28	Glycosyltransferase family protein 2 n=41 Tax=Bras...	[more]
A0A426ZYP2_ENSVE	4.980e-41	44.81	Uncharacterized protein n=5 Tax=Musaceae TaxID=463...	[more]
A0A6P5H2H3_ANACO	6.420e-41	45.75	uncharacterized protein LOC109728978 n=3 Tax=Anana...	[more]
A0A6I9QBX0_ELAGV	1.160e-40	45.28	uncharacterized protein LOC105033416 n=2 Tax=Cocos...	[more]
A0A6D2KEY4_9BRAS	1.190e-40	45.28	Uncharacterized protein n=1 Tax=Microthlaspi errat...	[more]
A0A444E699_ENSVE	1.200e-40	45.50	Uncharacterized protein n=1 Tax=Ensete ventricosum...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig1889	contig	P-wetherbeei_contig1889:1..2498 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Seed ortholog	2880.D8LPR2
Model size	1663
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	signal anchor
Exons	4
Evalue	4.01e-96
EggNOG OGs	2CMCB@1\|root,2QPYF@2759\|Eukaryota
Cds size	1536

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186157.8904219-CDS-P-wetherbeei_contig1889:0..158	1683186157.8904219-CDS-P-wetherbeei_contig1889:0..158	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig1889 1..158 -
1683186157.9028986-CDS-P-wetherbeei_contig1889:443..615	1683186157.9028986-CDS-P-wetherbeei_contig1889:443..615	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig1889 444..615 -
1683186157.916329-CDS-P-wetherbeei_contig1889:937..1003	1683186157.916329-CDS-P-wetherbeei_contig1889:937..1003	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig1889 938..1003 -
1683186157.9287558-CDS-P-wetherbeei_contig1889:1231..2371	1683186157.9287558-CDS-P-wetherbeei_contig1889:1231..2371	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig1889 1232..2371 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186157.9380298-UTR-P-wetherbeei_contig1889:2371..2498	1683186157.9380298-UTR-P-wetherbeei_contig1889:2371..2498	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig1889 2372..2498 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig1889.1.2	prot_P-wetherbeei_contig1889.1.2	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig1889 1..2371 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig1889:1..2498-
coding sequence from alignment at P-wetherbeei_contig1889:1..2498-

protein sequence of mRNA_P-wetherbeei_contig1889.1.2

>prot_P-wetherbeei_contig1889.1.2 ID=prot_P-wetherbeei_contig1889.1.2|Name=mRNA_P-wetherbeei_contig1889.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=512bp
MRPRDPEEACGRCERMRTRSDARIDVLQGNPHEPEAARSKRWLWAAGSAI
IFLAGMEAGASLGYSSASIKVDSVDGTSPTTRVDGHRSLPGSTSGAGGGR
EALAIEPTLSLNLATAGFPGSPGGESAKERAPVTSEEDAGGDDDGGSIDE
ALDGTDGGGGSGGTEGLNGLRKAQWAKAEDVMQRLKDGENGPKIVHRREL
LETYIKWHTDRGLAPTLAELLASPSRHPKAAVEATNSLFAAAAFSAAAGA
AGSTAVATGRRSLADAAPGEAAGAAAGAPPQPPPSQSPHLLPPPPGGKPP
TVTVILNVYEREVLPDQLAALLRQTAAARLSEVWVCVFSAPAEAAALRAV
RGAGAAAAAAGVRMRVVVSDYNFKFYGRFQVALTAPTDFVWLLDDDMLPG
KEHLANLIHAAGTDLLGQSVLGSIGRVLPRPHSDMRLDSYRTWGPHGGLY
LPDYYFDMANQERAVPVDYLCSQWFLRPEWLQHMWAERPQTFATGEDFHL
SYTLGQFGHLGT

mRNA from alignment at P-wetherbeei_contig1889:1..2498-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig1889.1.2 ID=mRNA_P-wetherbeei_contig1889.1.2|Name=mRNA_P-wetherbeei_contig1889.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2498bp|location=Sequence derived from alignment at P-wetherbeei_contig1889:1..2498- (Phaeothamnion wetherbeei SAG_119_79)
TCATCGCAGAAAAACCTGCACGTGCAGAAAATGGCTTTTCGGCAGCATGG
AAGCGTCGGTTTCGACTTGAAACTTCTCGGTGGTGCAAGTCAGCTTGTAC
AATGGCAAAGAAGGAGCTCTCCTCTAAATGAGGCCACGAGACCCAGAGGA
GGCCTGTGGCCGGTGTGAGCGGATGCGAACTCGGAGCGATGCGAGGATCG
ACGTCTTGCAGGGAAATCCACATGAGCCCGAGGCTGCTCGGTCGAAGCGG
TGGTTGTGGGCCGCTGGTTCCGCAATCATCTTCCTTGCGGGCATGGAGGC
GGGAGCCTCCTTGGGCTACTCCTCTGCGTCAATCAAGGTAGACTCCGTCG
ACGGCACCTCTCCGACGACGAGGGTGGACGGCCACCGAAGCTTGCCTGGA
TCGACCAGCGGCGCCGGCGGCGGCCGCGAAGCGTTGGCCATCGAGCCCAC
GCTCTCGCTGAACCTGGCAACAGCGGGCTTCCCGGGGTCGCCGGGCGGCG
AGAGCGCCAAGGAGCGGGCGCCCGTGACCAGCGAAGAGGACGCCGGCGGC
GACGACGACGGCGGTTCCATCGACGAAGCGCTCGACGGCACAGACGGTGG
CGGCGGAAGCGGCGGTACCGAAGGTCTGAATGGGCTGCGCAAGGCGCAGT
GGGCCAAGGCCGAAGACGTTATGCAGCGGCTAAAGGACGGCGAAAACGGG
CCCAAAATCGTCCACCGCCGCGAGCTGCTCGAAACATACATCAAGTGGCA
CACGGACCGCGGCCTCGCGCCGACGCTCGCCGAACTGCTGGCGTCGCCGT
CGCGCCACCCCAAGGCCGCCGTCGAAGCCACGAACAGCCTCTTTGCCGCC
GCAGCCTTTTCCGCCGCCGCCGGAGCCGCCGGGAGCACAGCTGTCGCCAC
TGGACGGCGCTCCCTCGCCGATGCTGCGCCAGGGGAAGCCGCAGGGGCAG
CAGCGGGAGCGCCGCCGCAGCCGCCACCGTCGCAGTCGCCGCATCTTTTG
CCACCGCCGCCAGGCGGAAAGCCGCCGACCGTTACAGTGATTCTGAACGT
GTACGAGCGAGAGGTGCTGCCAGACCAGCTGGCGGCGCTGCTGAGACAGA
CGGCGGCGGCGCGGCTGAGCGAGGTCTGGGTGTGTGTCTTCTCGGCGCCC
GCCGAGGCCGCCGCGTTGCGCGCCGTCCGGGGGGCGGGGGCAGCGGCAGC
TGCGGCCGGCGTCCGCATGCGGGTAGTCGTGTCCGACTATAACTTTAAGT
TCTACGGACGTTTTCAGGTGAGGGGACGAAAAGAGGGTGGATGGTAGACA
TTTTTCCTACCGTCTGCACTCTCTTTTTTTGAAAAGAGAAGCAATTCCCT
GGCACTTGCATCTTGAATGCGGATCAGATCGAGTTCGTCGTGTTTCTGCT
TACAACTTTGGAAGGATCCCTTCAAAAAGCAACCATCAACTACGGTAACC
TTCGCCGCTTCTGCCCGTGCTCTTTGCCCGCCATTCCGCCCGCAGGTGGC
ACTGACGGCGCCGACGGACTTCGTGTGGCTCTTGGACGACGACATGCTGC
CGGGAAAGGAGGTAATTGGCTGGAATGGACAGAAGCCAGAAAAGCGGGTG
CCGGCAGCCAGTGTATGGAGAGCAATGGTTATTCGCCGTTTGCTTGTGGC
GGTTGCGGCGACTGCATTGGCGGCGGTGGCGGTGGCAGTAGCGATCACGC
TGCTGATGGCAGCAATGCGGTGGCAGCGGAGGCGGCGGTGAGGAGAGTTG
CTTTTCAGGCCCGCACACCCTCATTACACACGTGCAACCGTCTCCGTCTT
CCTCTCTATTTCCCATTCTAATGAGCTGCATTTGGATCACCATATTGCAC
CGACGTGGCCACCACCGGTTTACACCCGAACAGCACCTGGCAAACCTGAT
TCATGCCGCGGGAACGGATCTGCTGGGGCAGAGCGTACTCGGGAGCATCG
GGCGCGTCCTGCCGCGGCCGCACTCCGACATGAGACTCGACTCGTATCGG
ACGTGGGGGCCGCATGGCGGACTCTACCTTCCGGACTATTATTTCGACAT
GGCGAGTCATTCTAGTTCTTTTCGTTGATCTTGGCTTGTATGAAATAATG
CTCAATAACTGCTGTGCATATGCATACAGCTTCTTTTCGCTGCTCAGACG
AACTTTTGCAAGCCGCTCTCCACCGCCGCTGCCGCTTACGCCCACATTGC
TGCTGATGCCCATACAATCGTCGCCACCGCCGCCGCCGTCACCGTTGCCG
CCGGTCCTGTTTTCCCTCTTGCCGCCCACCGCCCGACGTCGCCGCTGCCG
CCTGTCCTTTCACTCCTCCAATTACAACAACGACAACAAGATCAGGAGCG
GGCGGTGCCGGTGGACTACCTGTGCAGCCAGTGGTTTCTGCGGCCCGAGT
GGCTGCAGCACATGTGGGCGGAGCGGCCTCAGACGTTTGCAACGGGTGAG
GATTTCCACCTCAGTTACACGCTGGGGCAGTTTGGACACCTTGGGACG

Coding sequence (CDS) from alignment at P-wetherbeei_contig1889:1..2498-

>mRNA_P-wetherbeei_contig1889.1.2 ID=mRNA_P-wetherbeei_contig1889.1.2|Name=mRNA_P-wetherbeei_contig1889.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1536bp|location=Sequence derived from alignment at P-wetherbeei_contig1889:1..2498- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGGCCACGAGACCCAGAGGAGGCCTGTGGCCGGTGTGAGCGGATGCG
AACTCGGAGCGATGCGAGGATCGACGTCTTGCAGGGAAATCCACATGAGC
CCGAGGCTGCTCGGTCGAAGCGGTGGTTGTGGGCCGCTGGTTCCGCAATC
ATCTTCCTTGCGGGCATGGAGGCGGGAGCCTCCTTGGGCTACTCCTCTGC
GTCAATCAAGGTAGACTCCGTCGACGGCACCTCTCCGACGACGAGGGTGG
ACGGCCACCGAAGCTTGCCTGGATCGACCAGCGGCGCCGGCGGCGGCCGC
GAAGCGTTGGCCATCGAGCCCACGCTCTCGCTGAACCTGGCAACAGCGGG
CTTCCCGGGGTCGCCGGGCGGCGAGAGCGCCAAGGAGCGGGCGCCCGTGA
CCAGCGAAGAGGACGCCGGCGGCGACGACGACGGCGGTTCCATCGACGAA
GCGCTCGACGGCACAGACGGTGGCGGCGGAAGCGGCGGTACCGAAGGTCT
GAATGGGCTGCGCAAGGCGCAGTGGGCCAAGGCCGAAGACGTTATGCAGC
GGCTAAAGGACGGCGAAAACGGGCCCAAAATCGTCCACCGCCGCGAGCTG
CTCGAAACATACATCAAGTGGCACACGGACCGCGGCCTCGCGCCGACGCT
CGCCGAACTGCTGGCGTCGCCGTCGCGCCACCCCAAGGCCGCCGTCGAAG
CCACGAACAGCCTCTTTGCCGCCGCAGCCTTTTCCGCCGCCGCCGGAGCC
GCCGGGAGCACAGCTGTCGCCACTGGACGGCGCTCCCTCGCCGATGCTGC
GCCAGGGGAAGCCGCAGGGGCAGCAGCGGGAGCGCCGCCGCAGCCGCCAC
CGTCGCAGTCGCCGCATCTTTTGCCACCGCCGCCAGGCGGAAAGCCGCCG
ACCGTTACAGTGATTCTGAACGTGTACGAGCGAGAGGTGCTGCCAGACCA
GCTGGCGGCGCTGCTGAGACAGACGGCGGCGGCGCGGCTGAGCGAGGTCT
GGGTGTGTGTCTTCTCGGCGCCCGCCGAGGCCGCCGCGTTGCGCGCCGTC
CGGGGGGCGGGGGCAGCGGCAGCTGCGGCCGGCGTCCGCATGCGGGTAGT
CGTGTCCGACTATAACTTTAAGTTCTACGGACGTTTTCAGGTGGCACTGA
CGGCGCCGACGGACTTCGTGTGGCTCTTGGACGACGACATGCTGCCGGGA
AAGGAGCACCTGGCAAACCTGATTCATGCCGCGGGAACGGATCTGCTGGG
GCAGAGCGTACTCGGGAGCATCGGGCGCGTCCTGCCGCGGCCGCACTCCG
ACATGAGACTCGACTCGTATCGGACGTGGGGGCCGCATGGCGGACTCTAC
CTTCCGGACTATTATTTCGACATGGCGAATCAGGAGCGGGCGGTGCCGGT
GGACTACCTGTGCAGCCAGTGGTTTCTGCGGCCCGAGTGGCTGCAGCACA
TGTGGGCGGAGCGGCCTCAGACGTTTGCAACGGGTGAGGATTTCCACCTC
AGTTACACGCTGGGGCAGTTTGGACACCTTGGGACG