mRNA_P-wetherbeei_contig18847.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18847.1.1
Unique NamemRNA_P-wetherbeei_contig18847.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig18847.1.1 vs. uniprot
Match: A0A421GIU1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GIU1_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 3.650e-7
Identity = 32/89 (35.96%), Postives = 51/89 (57.30%), Query Frame = 1 
Query:   10 KSQLHAQRRLQHLCSGLLV-AGVHHWWVTEALPYFVFISCLAAAVAAIHGLRKMFSSVNACYLRFLGPLLREEEISR--LPGSFWFLLG 267
            +  LH QR+LQHL +G+++ A   ++  T      +F + L      +H LR    +VN+ YL     +LR+ E+SR  LPG+++FLLG
Sbjct:   41 RGDLHLQRKLQHLGTGVMIYAASRYFGPTAGSSVLLFFALL---FYILHELRGRSKAVNSAYLACFRSILRQHEVSRAALPGAYYFLLG 126
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BLAST of mRNA_P-wetherbeei_contig18847.1.1 vs. uniprot
Match: A0A6A3IIK6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IIK6_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 5.190e-7
Identity = 30/93 (32.26%), Postives = 53/93 (56.99%), Query Frame = 1 
Query:    1 IRKKSQLHAQRRLQHLCSGLLVAGVHHWW--VTEALPYFVFISCLAAAVAAIHGLRKMFSSVNACYLRFLGPLLREEEISR--LPGSFWFLLG 267
            ++ +  LH QR+LQH+ +G+++     ++  +  A    VF    A     +H LR    +VN+ Y++    +LR+ E+SR  LPG+++FLLG
Sbjct:   41 VKHRGDLHVQRKLQHVGTGVMIYAASRFFGPLAGATVLLVF----AVLFYGLHELRGRSEAVNSAYIKCFRTILRQYEVSRAALPGAYYFLLG 129
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BLAST of mRNA_P-wetherbeei_contig18847.1.1 vs. uniprot
Match: M4BIN8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BIN8_HYAAE)

HSP 1 Score: 50.8 bits (120), Expect = 2.700e-5
Identity = 30/93 (32.26%), Postives = 49/93 (52.69%), Query Frame = 1 
Query:    1 IRKKSQLHAQRRLQHLCSGLLVAGVHHWWVTEALPYFVFISCLAAAVAAIHGLRKMFSSVNACYLRFLGPLLREEEIS--RLPGSFWFLLGVA 273
            +R +S LH QR++ HL +G+L+     ++     P    +   A      H LR+  ++ N  YL+    LLR  E++   LPG+++FLLG A
Sbjct:   62 VRDRSDLHLQRKIHHLITGVLIYVASRFFGRG--PGATVLLIFALLCYGFHVLRQHSNAFNTAYLQRFRRLLRPHEVAGTTLPGAYYFLLGSA 152
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BLAST of mRNA_P-wetherbeei_contig18847.1.1 vs. uniprot
Match: UPI00190D7534 (uncharacterized protein n=1 Tax=Penicillium roqueforti TaxID=5082 RepID=UPI00190D7534)

HSP 1 Score: 50.4 bits (119), Expect = 3.810e-5
Identity = 26/79 (32.91%), Postives = 41/79 (51.90%), Query Frame = 1 
Query:   31 RRLQHLCSGLLVAGVHHWWVTEALPYFVFISCLAAAVAAIHGLRKMFSSVNACYLRFLGPLLREEEISRLPGSFWFLLG 267
            R+L H+  G L   ++   V + L     +  +   +AA   +R  F  VN  Y+RF+G L+RE E++   G  W+LLG
Sbjct:  129 RKLLHVSIGFLTLSLYSQGV-QTLQITPVLFTVLVPIAATDLIRHRFERVNKVYIRFMGALMRETEVTGYNGVIWYLLG 206
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BLAST of mRNA_P-wetherbeei_contig18847.1.1 vs. uniprot
Match: E9CZH6_COCPS (Phosphatidate cytidylyltransferase n=2 Tax=Coccidioides posadasii TaxID=199306 RepID=E9CZH6_COCPS)

HSP 1 Score: 49.7 bits (117), Expect = 7.130e-5
Identity = 27/79 (34.18%), Postives = 41/79 (51.90%), Query Frame = 1 
Query:   31 RRLQHLCSGLLVAGVHHWWVTEALPYFVFISCLAAAVAAIHGLRKMFSSVNACYLRFLGPLLREEEISRLPGSFWFLLG 267
            R+L H+  G +   ++   V + L    ++      +AA   LR  F +VN  Y+R LG L+RE E+S   G  W+LLG
Sbjct:  127 RKLLHVSIGFITIDLYRRGV-QTLEITPWLLTALIPIAATDFLRHRFQTVNKLYIRCLGALMRETEVSGYNGVIWYLLG 204
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BLAST of mRNA_P-wetherbeei_contig18847.1.1 vs. uniprot
Match: A0A0J8U6Y6_COCIT (HSD1 n=1 Tax=Coccidioides immitis H538.4 TaxID=396776 RepID=A0A0J8U6Y6_COCIT)

HSP 1 Score: 49.7 bits (117), Expect = 7.170e-5
Identity = 27/79 (34.18%), Postives = 41/79 (51.90%), Query Frame = 1 
Query:   31 RRLQHLCSGLLVAGVHHWWVTEALPYFVFISCLAAAVAAIHGLRKMFSSVNACYLRFLGPLLREEEISRLPGSFWFLLG 267
            R+L H+  G +   ++   V + L    ++      +AA   LR  F +VN  Y+R LG L+RE E+S   G  W+LLG
Sbjct:  117 RKLLHVSIGFITIDLYRRGV-QTLEITPWLLTALIPIAATDFLRHRFQTVNKLYIRCLGALMRETEVSGYNGVIWYLLG 194
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BLAST of mRNA_P-wetherbeei_contig18847.1.1 vs. uniprot
Match: C4JYP2_UNCRE (Uncharacterized protein n=1 Tax=Uncinocarpus reesii (strain UAMH 1704) TaxID=336963 RepID=C4JYP2_UNCRE)

HSP 1 Score: 49.7 bits (117), Expect = 7.200e-5
Identity = 28/79 (35.44%), Postives = 41/79 (51.90%), Query Frame = 1 
Query:   31 RRLQHLCSGLLVAGVHHWWVTEALPYFVFISCLAAAVAAIHGLRKMFSSVNACYLRFLGPLLREEEISRLPGSFWFLLG 267
            R+L H+  G +   ++   V + L    ++      +AA   LR  F SVN  Y+R LG L+RE E+S   G  W+LLG
Sbjct:  155 RKLLHVSIGFVTIDLYRRGV-QPLQITPWLLTALIPIAATDFLRHRFQSVNKFYIRCLGALMRETEVSGYNGVIWYLLG 232
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BLAST of mRNA_P-wetherbeei_contig18847.1.1 vs. uniprot
Match: J3KBH6_COCIM (Phosphatidate cytidylyltransferase n=5 Tax=Coccidioides TaxID=5500 RepID=J3KBH6_COCIM)

HSP 1 Score: 49.7 bits (117), Expect = 7.210e-5
Identity = 27/79 (34.18%), Postives = 41/79 (51.90%), Query Frame = 1 
Query:   31 RRLQHLCSGLLVAGVHHWWVTEALPYFVFISCLAAAVAAIHGLRKMFSSVNACYLRFLGPLLREEEISRLPGSFWFLLG 267
            R+L H+  G +   ++   V + L    ++      +AA   LR  F +VN  Y+R LG L+RE E+S   G  W+LLG
Sbjct:  157 RKLLHVSIGFITIDLYRRGV-QTLEITPWLLTALIPIAATDFLRHRFQTVNKLYIRCLGALMRETEVSGYNGVIWYLLG 234
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18847.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A421GIU1_9STRA3.650e-735.96Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A6A3IIK6_9STRA5.190e-732.26Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
M4BIN8_HYAAE2.700e-532.26Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
UPI00190D75343.810e-532.91uncharacterized protein n=1 Tax=Penicillium roquef... [more]
E9CZH6_COCPS7.130e-534.18Phosphatidate cytidylyltransferase n=2 Tax=Coccidi... [more]
A0A0J8U6Y6_COCIT7.170e-534.18HSD1 n=1 Tax=Coccidioides immitis H538.4 TaxID=396... [more]
C4JYP2_UNCRE7.200e-535.44Uncharacterized protein n=1 Tax=Uncinocarpus reesi... [more]
J3KBH6_COCIM7.210e-534.18Phosphatidate cytidylyltransferase n=5 Tax=Coccidi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18847contigP-wetherbeei_contig18847:3..278 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog157072.XP_008862989.1
Preferred nameDGK1
PFAMsCTP_transf_1
Model size276
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017
KEGG koko:K16368
KEGG ReactionR09944
KEGG Pathwayko00564,ko01100,ko01110,map00564,map01100,map01110
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006629,GO:0006644,GO:0006650,GO:0006654,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046473,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:0098827,GO:1901576
Exons1
Evalue7.03e-16
EggNOG OGsCOG0170@1|root,KOG4453@2759|Eukaryota
EC2.7.1.174
Descriptionphytol kinase activity
Cds size276
COG categoryI
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186156.729005-CDS-P-wetherbeei_contig18847:2..2781683186156.729005-CDS-P-wetherbeei_contig18847:2..278Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18847 3..278 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18847.1.1prot_P-wetherbeei_contig18847.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18847 3..278 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18847.1.1

>prot_P-wetherbeei_contig18847.1.1 ID=prot_P-wetherbeei_contig18847.1.1|Name=mRNA_P-wetherbeei_contig18847.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=92bp
IRKKSQLHAQRRLQHLCSGLLVAGVHHWWVTEALPYFVFISCLAAAVAAI
HGLRKMFSSVNACYLRFLGPLLREEEISRLPGSFWFLLGVAG
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mRNA from alignment at P-wetherbeei_contig18847:3..278-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18847.1.1 ID=mRNA_P-wetherbeei_contig18847.1.1|Name=mRNA_P-wetherbeei_contig18847.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=276bp|location=Sequence derived from alignment at P-wetherbeei_contig18847:3..278- (Phaeothamnion wetherbeei SAG_119_79)
ATAAGGAAGAAAAGCCAACTGCACGCACAGCGGCGCCTTCAGCACCTATG
CTCGGGACTCCTCGTGGCGGGCGTGCATCACTGGTGGGTCACAGAGGCTC
TGCCGTACTTTGTTTTTATATCTTGTTTAGCGGCGGCAGTCGCGGCGATC
CACGGCTTGCGGAAGATGTTCTCGTCGGTGAACGCCTGTTACCTTCGCTT
CTTGGGCCCATTGCTGCGAGAAGAAGAAATTTCCCGCCTTCCCGGGAGCT
TTTGGTTTCTGCTGGGCGTCGCTGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18847:3..278-

>mRNA_P-wetherbeei_contig18847.1.1 ID=mRNA_P-wetherbeei_contig18847.1.1|Name=mRNA_P-wetherbeei_contig18847.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=276bp|location=Sequence derived from alignment at P-wetherbeei_contig18847:3..278- (Phaeothamnion wetherbeei SAG_119_79)
ATAAGGAAGAAAAGCCAACTGCACGCACAGCGGCGCCTTCAGCACCTATG
CTCGGGACTCCTCGTGGCGGGCGTGCATCACTGGTGGGTCACAGAGGCTC
TGCCGTACTTTGTTTTTATATCTTGTTTAGCGGCGGCAGTCGCGGCGATC
CACGGCTTGCGGAAGATGTTCTCGTCGGTGAACGCCTGTTACCTTCGCTT
CTTGGGCCCATTGCTGCGAGAAGAAGAAATTTCCCGCCTTCCCGGGAGCT
TTTGGTTTCTGCTGGGCGTCGCTGGC
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