mRNA_P-wetherbeei_contig18667.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18667.1.2 vs. uniprot
Match: W7TFP2_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFP2_9STRA) HSP 1 Score: 176 bits (446), Expect = 2.980e-53 Identity = 81/158 (51.27%), Postives = 107/158 (67.72%), Query Frame = 1
Query: 1 GNKYFENNEYAFGQHRWVEYKDIHNYDASTVMPEWHGWLHHTFDEPPVGKLDVGKDRIETSKVSDVPFRSHVGKVAHPEEGDTQNFSTYRPRGYGVGNLQQKFGEPSKFYRQPAHP---EHPLSNRGGRFVRQKGVESWDPADPAGEKAKKPIRSVDD 465
GNKYFEN EY FGQHRWVEYKDIHNY+ S++ PEWHGW+HH DE P GK V + ++ ++ P++ G + EG N++ +R RGYGVG+L QK GEP KF+ QP HP + +GGRF KG E+W+P+DP G+K +PIRS+D+
Sbjct: 42 GNKYFENVEYPFGQHRWVEYKDIHNYEPSSIPPEWHGWIHHMTDEVPAGKAGVTEPGMKIAEGQHTPYQVAAGLTDYQMEGQL-NWTAHRSRGYGVGSLHQKAGEPDKFWVQPGHPLAAKKQEKGKGGRFEGLKGYEAWNPSDPEGKKTAQPIRSLDE 198
BLAST of mRNA_P-wetherbeei_contig18667.1.2 vs. uniprot
Match: A0A4D9CLK1_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLK1_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.640e-52 Identity = 81/158 (51.27%), Postives = 107/158 (67.72%), Query Frame = 1
Query: 1 GNKYFENNEYAFGQHRWVEYKDIHNYDASTVMPEWHGWLHHTFDEPPVGKLDVGKDRIETSKVSDVPFRSHVGKVAHPEEGDTQNFSTYRPRGYGVGNLQQKFGEPSKFYRQPAHP---EHPLSNRGGRFVRQKGVESWDPADPAGEKAKKPIRSVDD 465
GNKYFEN EY FGQHRWVEYKDIHNY+ S++ PEWHGW+HH DE P GK V + ++ ++ P++ G + EG N++ +R RGYGVG+L QK GEP KF+ QP HP + +GGRF KG E+W+P+DP G+K +PIRS+D+
Sbjct: 99 GNKYFENVEYPFGQHRWVEYKDIHNYEPSSIPPEWHGWIHHMTDEVPAGKAGVTEPGMKIAEGQHTPYQVATGLTDYQMEGQL-NWTAHRSRGYGVGSLHQKAGEPDKFWVQPGHPLAAKKQEKGKGGRFEGLKGYEAWNPSDPEGKKTAQPIRSLDE 255
BLAST of mRNA_P-wetherbeei_contig18667.1.2 vs. uniprot
Match: A0A835ZAE7_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE7_9STRA) HSP 1 Score: 171 bits (432), Expect = 3.190e-51 Identity = 81/156 (51.92%), Postives = 103/156 (66.03%), Query Frame = 1
Query: 1 GNKYFENNEYAFGQHRWVEYKDIHNYDASTVMPEWHGWLHHTFDEPPVGKLDVGKDRIETSKVSDVPFRSHVGKVAHPEEGDTQNFSTYRPRGYGVGNLQQKFGEPSKFYRQPAHPEHPLSNRGGRFVRQKGVESWDPADPAGEKAKKPIRSVDDL 468
GNKY+EN +G HRWVEY D HNYD+STV PEWHGWLH+ D PP D + + TS D P+ +HVG + QN S +RPRGYGVGNL QK+GEP +Y+QP HP +P+S++GGRF + VE DP +P KKP+RS+D+L
Sbjct: 39 GNKYYENRSKIYGTHRWVEYADCHNYDSSTVTPEWHGWLHNMHDTPPDQSADPKRHEL-TSSHDDCPYDTHVGPASAAPVLH-QNLSGFRPRGYGVGNLFQKWGEPELYYKQPGHPANPISDKGGRFNTEPEVEFADPNNPTMLNPKKPLRSLDEL 192
BLAST of mRNA_P-wetherbeei_contig18667.1.2 vs. uniprot
Match: D7FKD0_ECTSI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKD0_ECTSI) HSP 1 Score: 166 bits (421), Expect = 1.630e-49 Identity = 76/157 (48.41%), Postives = 102/157 (64.97%), Query Frame = 1
Query: 1 GNKYFENNEYAFGQHRWVEYKDIHNYDASTVMPEWHGWLHHTFDEPPVGKLDVGKDR-IETSKVSDVPFRSHVGKVAHPEEGDTQNFSTYRPRGYGVGNLQQKFGEPSKFYRQPAHPEHPLSNRGGRFVRQKGVESWDPADPAGEKAKKPIRSVDDL 468
GNKY+EN +Y +GQHRWVEY DIHNYD+S+V WH WLHH D P ++ + + IE + P V P D N ST+RPRG G+GN+ Q+ GEP +Y+QP HP+H LS++GGRF +QK +E+WDP DP G K+PIR + ++
Sbjct: 43 GNKYYENKDYPYGQHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAAAELPEMKPIEIAVGQHTPHNDFVA----PGRVDDVNRSTWRPRGAGMGNIWQEPGEPDMYYKQPGHPQHALSDKGGRFSKQKSMETWDPKDPKGLNTKQPIRDLTEV 195
BLAST of mRNA_P-wetherbeei_contig18667.1.2 vs. uniprot
Match: A0A7S0XDH0_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDH0_9STRA) HSP 1 Score: 135 bits (339), Expect = 2.850e-37 Identity = 62/137 (45.26%), Postives = 88/137 (64.23%), Query Frame = 1
Query: 1 GNKYFENNEYAFGQHRWVEYKDIHNYDASTVMPEWHGWLHHTFDEPP-VGKLDVGKDRIETSKVSDVPFRSHVGKVAHPEEGDTQNFSTYRPRGYGVGNLQQKFGEPSKFYRQPAHPEHPLSNRGGRFVRQKGVESW 408
GNKY+E+ F QHRW+EY DIH++DAS + PEWHGW+HH +DE P G + G I + VS +++HVG ++ E + N +TYR RGY VG+L+ EP ++Y+QP HP HPL +GGR+ K + +
Sbjct: 42 GNKYYEDLSAPFNQHRWIEYADIHDFDASMIQPEWHGWMHHMYDEVPGEGTIKTG---IPLTPVSHAVYKNHVG-YSNVEPLEQVNLTTYRSRGYKVGSLKTGPDEPDRYYKQPGHPLHPLVEKGGRYKHIKSINGF 174
BLAST of mRNA_P-wetherbeei_contig18667.1.2 vs. uniprot
Match: A0A7S2B0X3_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0X3_9STRA) HSP 1 Score: 134 bits (336), Expect = 8.580e-37 Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 1
Query: 1 GNKYFENNEYAFGQHRWVEYKDIHNYDASTVMPEWHGWLHHTFDEPPVGKLDVGKDRIETS---KVSDVPFRSHVGKVAHPEEGDTQNFSTYRPRGYGVGNLQQKFGEPSKFYRQPAHPEHPLSNRG-GRFVRQKGVESWDPADPAGEKAKKPIRSV 459
GN+YFEN +Y GQHRWV Y+DIHNYDA+ + PEWHGW+ H D P +D+++T D + +H+G A+ E N++ +R RGY +G+++Q +P F+ H H L+ G GR++ QKG+ W+P DP GE+A P RS+
Sbjct: 29 GNQYFENTDYPHGQHRWVVYRDIHNYDAAAIPPEWHGWMCHMVDAPGPDSEKFIEDKLKTKCEIDGGDECYDTHLGYTAY-EMDPLLNYTNFRKRGYKIGSIKQLPDDPDAFH---VHAGHALNKGGTGRYLEQKGMHLWNPEDPEGEEAPVPTRSL 181
BLAST of mRNA_P-wetherbeei_contig18667.1.2 vs. uniprot
Match: A0A7S2GA95_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GA95_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.440e-33 Identity = 72/165 (43.64%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 1 GNKYFENNEYAFGQHRWVEYKDIHNYDASTVMPEWHGWLHHTFDEPPVGKLDVGKDRIETSKVSDVPFRS----HVGKVAHPEEGDTQ-NFSTYRPRGYGVGNLQQKFGEPSKFYRQPAHPEHPLSNRGGRFVRQKGVESWDPADPAGEKA--KKPI---RSVDD 465
GN+YFEN +Y GQHRWVEY DIHNYDA++V PEWHGW+ H D P + ++++T D S HVG + E DT N + +R RG+ +G ++QK E K+++ ++ S GRF QKG+E WDPADP G +A KKP RS+D+
Sbjct: 80 GNQYFENLDYPHGQHRWVEYADIHNYDAASVPPEWHGWMTHMQDAPGSDAREFITEKLKTKLEIDKGDHSIYDHHVGHTTY--EMDTLLNHTMHRKRGFNIGGIKQKPEEEDKYHKHAGSAQNKGST--GRFESQKGMEYWDPADPDGAEALKKKPYVRTRSLDE 240
BLAST of mRNA_P-wetherbeei_contig18667.1.2 vs. uniprot
Match: A0A7S3HS43_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HS43_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.810e-33 Identity = 58/127 (45.67%), Postives = 80/127 (62.99%), Query Frame = 1
Query: 1 GNKYFENNEYAFGQHRWVEYKDIHNYDASTVMPEWHGWLHHTFDEPPVGKLDVGKDRIETSKVSDVPFRSHVGKV---AHPEEGDTQNFSTYRPRGYGVGNLQQKFGEPSKFYRQPAHPEHPLSNRG 372
GNKYFEN + FGQHRWVEYK+IHNYD++ + PEWHGW+HH +DE P + V D + TS +S + +HVG+V A + + + + YR RGY +G+L E +Y+QP HP S +G
Sbjct: 44 GNKYFENQDLPFGQHRWVEYKNIHNYDSTMIQPEWHGWMHHVYDETPNDPVAV-PDYLPTSTISHAIYNTHVGRVDPAAAANDREQIDTTQYRRRGYKIGSLMTGPDEEDHYYKQPGHPLSKDSEKG 169
BLAST of mRNA_P-wetherbeei_contig18667.1.2 vs. uniprot
Match: A0A7S1UJS8_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJS8_9STRA) HSP 1 Score: 123 bits (308), Expect = 8.930e-33 Identity = 62/122 (50.82%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 1 GNKYFENNEYAFGQHRWVEYKDIHNYDASTVMPEWHGWLHHTFDEPPVGKLDVGKDRIE-TSKVSDVPFRSHVGKVAH---PEEGDTQNFSTYRPRGYGVGN--LQQKFGEPSKFYRQPAHP 348
GNKY+EN EY F QHRWVE+KDIHN+DAS + PEWHGW+HHT+DEPP + K +E T++ PF HVG V+ PE + N + R RGYGVGN L +P ++Y+Q +HP
Sbjct: 41 GNKYYENLEYPFPQHRWVEFKDIHNFDASMIPPEWHGWVHHTYDEPPTEA--IAKPALEATAEQVHTPFDHHVGHVSEDFVPE--NMHNTTQKRARGYGVGNANLYMDPEDPDEYYKQTSHP 158
BLAST of mRNA_P-wetherbeei_contig18667.1.2 vs. uniprot
Match: A0A7S2WF66_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WF66_9STRA) HSP 1 Score: 119 bits (298), Expect = 4.200e-30 Identity = 62/158 (39.24%), Postives = 85/158 (53.80%), Query Frame = 1
Query: 1 GNKYFENNEYAFGQHRWVEYKDIHNYDASTVMPEWHGWLHHTFDEP---PVGKLDVG-KDRIETSKVSDVPFRSHVGKVAHPEEGDTQNFSTYRPRGYGVGNLQQKFGEPSKFYRQPAHPEHPLSNRGGRFVRQKGVESWDPADPAGEKAKKPIRSVD 462
GN YFENN Y GQHRWVEYKDIHN DAS+V PEWHGW+ D P G +D +D ++ + +H+G V N + +R RGY +G + + + +++ H + S GRF KGV WDP++ GE +P RS+D
Sbjct: 116 GNLYFENNNYPHGQHRWVEYKDIHNLDASSVPPEWHGWMSSMQDAPGPDASGFIDTKMEDALQIDGAEHAVYANHLGLVCSTAPEGMLNKTGFRKRGYNIGGHKMQPEDSDQYHTHSGHAINKDSR--GRFEETKGVHLWDPSEEEGEAKLQPTRSLD 271 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18667.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18667.1.2 >prot_P-wetherbeei_contig18667.1.2 ID=prot_P-wetherbeei_contig18667.1.2|Name=mRNA_P-wetherbeei_contig18667.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp GNKYFENNEYAFGQHRWVEYKDIHNYDASTVMPEWHGWLHHTFDEPPVGKback to top mRNA from alignment at P-wetherbeei_contig18667:2..1258+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18667.1.2 ID=mRNA_P-wetherbeei_contig18667.1.2|Name=mRNA_P-wetherbeei_contig18667.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1257bp|location=Sequence derived from alignment at P-wetherbeei_contig18667:2..1258+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18667:2..1258+ >mRNA_P-wetherbeei_contig18667.1.2 ID=mRNA_P-wetherbeei_contig18667.1.2|Name=mRNA_P-wetherbeei_contig18667.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig18667:2..1258+ (Phaeothamnion wetherbeei SAG_119_79)back to top |