mRNA_P-wetherbeei_contig18576.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18576.1.1 vs. uniprot
Match: A0A836CBD6_9STRA (Putative eukaryotic initiation factor 4E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBD6_9STRA) HSP 1 Score: 176 bits (446), Expect = 3.560e-53 Identity = 78/134 (58.21%), Postives = 96/134 (71.64%), Query Frame = 1
Query: 13 CLRYDKKLAKGAPMD--EYVSTLSKVATFSTVEGFWRTYIHLKRPSSGMENNLNLYLFRDGPGHVPAWESYPNGGCWFLKVRKHGQGNPAVMGKLWQDLVLATVGEVFETPAVVGIGIATRQQNDLLSVWNDEN 408
C YDKK KG D EY + L KV TFSTVE FWR Y H+KRPS+ +ENN+N+Y FRD P P+WES+PNGGCW LK++K +V+GK+WQDLV A +GE FE P VVG+G+A R + DLLSVWN +N
Sbjct: 41 CFWYDKKHKKGGTGDYNEYKANLHKVHTFSTVEDFWRLYTHIKRPSA-LENNINMYFFRDAPNSSPSWESFPNGGCWILKIKKRAHSGTSVLGKMWQDLVFAAIGECFEEPTVVGVGMAVRSKEDLLSVWNSDN 173
BLAST of mRNA_P-wetherbeei_contig18576.1.1 vs. uniprot
Match: D7FIH1_ECTSI (Eukaryotic translation initiation factor 4E like2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH1_ECTSI) HSP 1 Score: 171 bits (434), Expect = 2.210e-51 Identity = 78/131 (59.54%), Postives = 101/131 (77.10%), Query Frame = 1
Query: 22 YDKKLAKGAP-MDEYVSTLSKVATFSTVEGFWRTYIHLKRPSSGMENNLNLYLFRDGPGHVPAWESYPNGGCWFLKVRKH-GQGNPAVMGKLWQDLVLATVGEVFETPAVVGIGIATRQQNDLLSVWNDEN 408
YDKK+ K +Y ++L K +F+T+EGFW+ Y+HLKRPS+ + N+N+YLFRD GHVP WE YPNGGCW L++RK GQ N +V+GK+WQDLVLA VGE+FE P VVGIG+A R + DLLSVWN++N
Sbjct: 38 YDKKMPKKTQDQTQYQASLHKAGSFNTLEGFWKNYVHLKRPSN-ISINVNVYLFRDERGHVPMWERYPNGGCWILRIRKKSGQTNTSVLGKMWQDLVLAVVGEMFEEPNVVGIGMAIRSREDLLSVWNEDN 167
BLAST of mRNA_P-wetherbeei_contig18576.1.1 vs. uniprot
Match: A0A6V1NUK3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NUK3_HETAK) HSP 1 Score: 165 bits (418), Expect = 7.150e-49 Identity = 76/132 (57.58%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 13 CLRYDKKLAKGAPMDEYVSTLSKVATFSTVEGFWRTYIHLKRPSSGMENNLNLYLFRDGPGHVPAWESYPNGGCWFLKVRKHGQGNPAVMGKLWQDLVLATVGEVFETPAVVGIGIATRQQNDLLSVWNDEN 408
C YDKKL K A ++EY S L + F TVEGFWR Y+HLKRP++ +E N NL+LFR G +VP WE++P GGCW LK+RK G P+V+ KLW DLVLA +GE F P VVGIG++ R + DLLSVWN +N
Sbjct: 47 CFWYDKKLQKNADLNEYKSHLHNLGAFHTVEGFWRYYVHLKRPAA-LEVNTNLHLFRHGEQYVPMWEAFPKGGCWILKLRKTPSG-PSVLSKLWHDLVLAVIGEAFAEPDVVGIGLSVRAREDLLSVWNGDN 176
BLAST of mRNA_P-wetherbeei_contig18576.1.1 vs. uniprot
Match: A0A067BS98_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BS98_SAPPC) HSP 1 Score: 161 bits (407), Expect = 1.330e-47 Identity = 73/134 (54.48%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 13 CLRYDKKLAKGAPMDEYVSTLSKVATFSTVEGFWRTYIHLKRPSSGMENNLNLYLFRDGPGHVPAWESYPNGGCWFLKVRKHGQGNPAVMGKLWQDLVLATVGEVFETPAVVGIGIATRQQNDLLSVWNDENGD 414
CL YD+KL K +D Y S L K+A F TVE FWR Y+H+KRPS + + NLYLFRD P P WE++PNGGCW LK++K V+GK+WQDL A VGE FET VVGI +A R + D++SVWN +N D
Sbjct: 25 CLWYDRKLPKRTDLDTYQSNLQKIAAFGTVEDFWRHYVHVKRPSQ-LNKDTNLYLFRDAPNCAPMWEAFPNGGCWILKIKKKAN----VLGKMWQDLCFAAVGEAFETLNVVGIAMAIRSKEDMISVWNADNTD 153
BLAST of mRNA_P-wetherbeei_contig18576.1.1 vs. uniprot
Match: A0A8K1CP93_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP93_PYTOL) HSP 1 Score: 159 bits (401), Expect = 1.330e-46 Identity = 73/132 (55.30%), Postives = 91/132 (68.94%), Query Frame = 1
Query: 13 CLRYDKKLAKGAPMDEYVSTLSKVATFSTVEGFWRTYIHLKRPSSGMENNLNLYLFRDGPGHVPAWESYPNGGCWFLKVRKHGQGNPAVMGKLWQDLVLATVGEVFETPAVVGIGIATRQQNDLLSVWNDEN 408
C+ YDKKL K + Y S L K+A FSTVE FWR YIH+KRPS + ++NLYLFRD P P WE++PNGGCW LK++K V+GK+WQDLV A VGE FE VVGI +A R + D++SVWN +N
Sbjct: 29 CIWYDKKLPKKIDVGTYQSNLQKIAAFSTVEDFWRHYIHIKRPSQ-LNRDVNLYLFRDRPNCAPMWEAFPNGGCWILKIKKKAN----VLGKMWQDLVFAAVGEAFEELDVVGIAMAIRSKEDMISVWNADN 155
BLAST of mRNA_P-wetherbeei_contig18576.1.1 vs. uniprot
Match: W2PGT1_PHYPN (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=W2PGT1_PHYPN) HSP 1 Score: 155 bits (393), Expect = 2.570e-45 Identity = 72/133 (54.14%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 16 LRYDKKLAKGAPMDEYVSTLSKVATFSTVEGFWRTYIHLKRPSSGMENNLNLYLFRDGPGHVPAWESYPNGGCWFLKVRKHGQGNPAVMGKLWQDLVLATVGEVFETPAVVGIGIATRQQNDLLSVWNDENGD 414
L YDKK+ K + Y S L K+ATF+TVE FWR YIH+KRPS + ++NLYLFRD P P WE++P GGCW LK++K V+GK+WQDLV A +GE FE VVGI +A R + D+LSVWN +N D
Sbjct: 34 LWYDKKMPKKIDVGTYQSNLQKIATFNTVEDFWRHYIHVKRPSQ-LSRDVNLYLFRDQPNCAPMWEAFPQGGCWILKIKKKAN----VLGKMWQDLVFAAIGEAFEQLDVVGIAMAIRSKEDMLSVWNADNSD 161
BLAST of mRNA_P-wetherbeei_contig18576.1.1 vs. uniprot
Match: D0N871_PHYIT (Eukaryotic initiation factor 4E, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N871_PHYIT) HSP 1 Score: 155 bits (392), Expect = 2.720e-45 Identity = 71/132 (53.79%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 19 RYDKKLAKGAPMDEYVSTLSKVATFSTVEGFWRTYIHLKRPSSGMENNLNLYLFRDGPGHVPAWESYPNGGCWFLKVRKHGQGNPAVMGKLWQDLVLATVGEVFETPAVVGIGIATRQQNDLLSVWNDENGD 414
RYDKK+ K + Y S L K+A F+TVE FWR YIH+KRPS + ++NLYLFRD P P WE++P GGCW LK++K V+GK+WQDLV A +GE FE VVGI +A R + D+LSVWN +N D
Sbjct: 25 RYDKKMPKKIDVGTYQSNLQKIANFNTVEDFWRHYIHVKRPSQ-LSRDVNLYLFRDQPNCAPMWEAFPQGGCWILKIKKKAN----VLGKMWQDLVFAAIGEAFEQLDVVGIAMAIRSKEDMLSVWNADNSD 151
BLAST of mRNA_P-wetherbeei_contig18576.1.1 vs. uniprot
Match: D0P4I3_PHYIT (Eukaryotic initiation factor 4E, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P4I3_PHYIT) HSP 1 Score: 154 bits (388), Expect = 3.850e-45 Identity = 71/133 (53.38%), Postives = 90/133 (67.67%), Query Frame = 1
Query: 16 LRYDKKLAKGAPMDEYVSTLSKVATFSTVEGFWRTYIHLKRPSSGMENNLNLYLFRDGPGHVPAWESYPNGGCWFLKVRKHGQGNPAVMGKLWQDLVLATVGEVFETPAVVGIGIATRQQNDLLSVWNDENGD 414
L YDKK+ K + Y S L K+A F+TVE FWR YIH+KRPS + ++NLYLFRD P P WE++P GGCW LK++K V+GK+WQDLV A +GE FE VVGI +A R + D+LSVWN +N D
Sbjct: 32 LWYDKKMPKKIDVGTYQSNLQKIANFNTVEDFWRHYIHVKRPSQ-LSRDVNLYLFRDQPNCAPMWEAFPQGGCWILKIKKKAN----VLGKMWQDLVFAAIGEAFEQLDVVGIAMAIRSKEDMLSVWNADNSD 159
BLAST of mRNA_P-wetherbeei_contig18576.1.1 vs. uniprot
Match: A0A024TXL0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TXL0_9STRA) HSP 1 Score: 154 bits (390), Expect = 4.850e-45 Identity = 70/133 (52.63%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 16 LRYDKKLAKGAPMDEYVSTLSKVATFSTVEGFWRTYIHLKRPSSGMENNLNLYLFRDGPGHVPAWESYPNGGCWFLKVRKHGQGNPAVMGKLWQDLVLATVGEVFETPAVVGIGIATRQQNDLLSVWNDENGD 414
L +DKK+ K + Y S L K+A F+TVE FWR YIH+KRPS + + NLYLFRD P P WE++PNGGCW LK++K V+GK+WQDL+ A +GE FET VVGI +A R + D++SVWN +N D
Sbjct: 23 LWFDKKMPKRTDVSTYQSNLQKIANFNTVEDFWRHYIHVKRPSQ-LAKDTNLYLFRDQPNCAPMWEAFPNGGCWILKIKKKAN----VLGKMWQDLLFAVIGEAFETLNVVGIAMALRSKEDMISVWNADNSD 150
BLAST of mRNA_P-wetherbeei_contig18576.1.1 vs. uniprot
Match: K3WZ97_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WZ97_GLOUD) HSP 1 Score: 154 bits (390), Expect = 5.140e-45 Identity = 72/133 (54.14%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 16 LRYDKKLAKGAPMDEYVSTLSKVATFSTVEGFWRTYIHLKRPSSGMENNLNLYLFRDGPGHVPAWESYPNGGCWFLKVRKHGQGNPAVMGKLWQDLVLATVGEVFETPAVVGIGIATRQQNDLLSVWNDENGD 414
L YDKKL K + Y S L K+A F+TVE FWR YIH+KRPS + ++NLYLFRD P P WE++P GGCW LK++K V+GK+WQDLV A +GEVF + VVGI +A R + D+LSVWN +N D
Sbjct: 27 LWYDKKLPKKIDVGTYQSNLQKIAQFNTVEDFWRHYIHVKRPSQ-LSRDVNLYLFRDQPNCAPMWEAFPQGGCWILKIKKKAN----VLGKMWQDLVFAAIGEVFASRDVVGIAMAIRSKEDMLSVWNADNSD 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18576.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18576.1.1 >prot_P-wetherbeei_contig18576.1.1 ID=prot_P-wetherbeei_contig18576.1.1|Name=mRNA_P-wetherbeei_contig18576.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp MLKTCLRYDKKLAKGAPMDEYVSTLSKVATFSTVEGFWRTYIHLKRPSSGback to top mRNA from alignment at P-wetherbeei_contig18576:218..1294- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18576.1.1 ID=mRNA_P-wetherbeei_contig18576.1.1|Name=mRNA_P-wetherbeei_contig18576.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1077bp|location=Sequence derived from alignment at P-wetherbeei_contig18576:218..1294- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18576:218..1294- >mRNA_P-wetherbeei_contig18576.1.1 ID=mRNA_P-wetherbeei_contig18576.1.1|Name=mRNA_P-wetherbeei_contig18576.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig18576:218..1294- (Phaeothamnion wetherbeei SAG_119_79)back to top |