mRNA_P-wetherbeei_contig1855.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1855.1.1 vs. uniprot
Match: A0A1X6PDU0_PORUM (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDU0_PORUM) HSP 1 Score: 58.9 bits (141), Expect = 2.760e-8 Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 7 ALDWWNEHSVKQFPELYIVVCTVLAAPASSGGLERDFCMAGRRIRPDRTSLRPRHIEMSLFLNANIDAIP 216
AL +W + +QFP L+ + + L A ASS ER+F +AGR +RP+R+SL +EM + AN D +P
Sbjct: 547 ALSFWGLNR-QQFPALFPLAASALGAAASSASCEREFSIAGRVVRPERSSLSVTSVEMHSLVGANADVLP 615
BLAST of mRNA_P-wetherbeei_contig1855.1.1 vs. uniprot
Match: A0A1X6NWJ4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWJ4_PORUM) HSP 1 Score: 57.4 bits (137), Expect = 9.520e-8 Identity = 29/69 (42.03%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 37 KQFPELYIVVCTVLAAPASSGGLERDFCMAGRRIRPDRTSLRPRHIEMSLFLNANIDAIP--APDRIPA 237
+QFP L+ + + + A ASS ER+F +AGR +RP+R+SL +EM + AN D +P AP IP+
Sbjct: 423 QQFPALFPLAASAIGAAASSASCEREFWIAGRLVRPERSSLSVTSVEMHSLVAANADVLPTDAPQCIPS 491
BLAST of mRNA_P-wetherbeei_contig1855.1.1 vs. uniprot
Match: A0A1X7TCX8_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TCX8_AMPQE) HSP 1 Score: 53.5 bits (127), Expect = 1.350e-7 Identity = 26/65 (40.00%), Postives = 36/65 (55.38%), Query Frame = 1
Query: 1 EDALDWWNEHSVKQFPELYIVVCTVLAAPASSGGLERDFCMAGRRIRPDRTSLRPRHIEMSLFLN 195
ED + WW+EH +P L+ + L+ P +S ER F AG I R L+P+H+ M LFLN
Sbjct: 14 EDPIVWWSEHEAA-YPSLHKLAMKYLSIPGTSVPAERLFSKAGELISARRNRLKPKHVNMVLFLN 77
BLAST of mRNA_P-wetherbeei_contig1855.1.1 vs. uniprot
Match: A0A6S7J0T8_PARCT (Zinc finger BED domain-containing 1-like n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7J0T8_PARCT) HSP 1 Score: 53.1 bits (126), Expect = 4.780e-7 Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 4 DALDWWNEHSVKQFPELYIVVCTVLAAPASSGGLERDFCMAGRRIRPDRTSLRPRHIEMSLFLNANI 204
+ L WW+EH K +P++ + L A A+S ER F AG + R+SL+P+++ M LFLN NI
Sbjct: 57 EPLKWWHEHG-KNYPKMSKLARKYLCATATSVPSERLFSKAGELVSHRRSSLKPKNVNMLLFLNQNI 122
BLAST of mRNA_P-wetherbeei_contig1855.1.1 vs. uniprot
Match: A0A1X7TEQ5_AMPQE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TEQ5_AMPQE) HSP 1 Score: 52.0 bits (123), Expect = 7.600e-6 Identity = 28/68 (41.18%), Postives = 39/68 (57.35%), Query Frame = 1
Query: 1 EDALDWWNEHSVKQFPELYIVVCTVLAAPASSGGLERDFCMAGRRIRPDRTSLRPRHIEMSLFLNANI 204
++ L WW E+ QFP + V LA P SS ER F AG I R+ L+P++++M LFLN N+
Sbjct: 489 DNPLLWWKENG-HQFPHVMKVAKKYLAIPRSSVPSERLFSKAGELISQRRSQLKPKNVDMILFLNKNL 555
BLAST of mRNA_P-wetherbeei_contig1855.1.1 vs. uniprot
Match: A0A1X7UCW0_AMPQE (BED-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UCW0_AMPQE) HSP 1 Score: 52.0 bits (123), Expect = 7.630e-6 Identity = 25/70 (35.71%), Postives = 40/70 (57.14%), Query Frame = 1
Query: 4 DALDWWNEHSVKQFPELYIVVCTVLAAPASSGGLERDFCMAGRRIRPDRTSLRPRHIEMSLFLNANIDAI 213
+ L+WW ++++ FP L + L P SS ER F AG+ + R ++P++I+M LFLN NI +
Sbjct: 529 NPLEWWKANAIR-FPRLSKIAAKYLCIPGSSVPSERLFSKAGQLVSERRNRIKPKNIDMILFLNHNIKLV 597
BLAST of mRNA_P-wetherbeei_contig1855.1.1 vs. uniprot
Match: A0A6P4EHV1_DRORH (uncharacterized protein LOC108042390 n=1 Tax=Drosophila rhopaloa TaxID=1041015 RepID=A0A6P4EHV1_DRORH) HSP 1 Score: 47.8 bits (112), Expect = 2.490e-5 Identity = 25/66 (37.88%), Postives = 37/66 (56.06%), Query Frame = 1
Query: 4 DALDWWNEHSVKQFPELYIVVCTVLAAPASSGGLERDFCMAGRRIRPDRTSLRPRHIEMSLFLNAN 201
D L++W +H ++ P+L I L PA+S ER F AG I R SL+P+ + + LF+N N
Sbjct: 8 DPLEYWKQHE-QEMPQLAISAKQGLCIPATSTESERMFSKAGLTISDRRASLKPKTVNILLFINKN 72
BLAST of mRNA_P-wetherbeei_contig1855.1.1 vs. uniprot
Match: G5A6F1_PHYSP (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A6F1_PHYSP) HSP 1 Score: 48.1 bits (113), Expect = 3.570e-5 Identity = 19/43 (44.19%), Postives = 28/43 (65.12%), Query Frame = 1
Query: 73 VLAAPASSGGLERDFCMAGRRIRPDRTSLRPRHIEMSLFLNAN 201
+ A P SS +ERDFC+AG + P RT + +++M +FLN N
Sbjct: 11 LFAVPTSSAHIERDFCVAGSMVTPQRTRITQHNVDMGIFLNRN 53
BLAST of mRNA_P-wetherbeei_contig1855.1.1 vs. uniprot
Match: A0A6G0JK10_9STRA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0JK10_9STRA) HSP 1 Score: 48.5 bits (114), Expect = 9.960e-5 Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 1
Query: 1 EDALDWWNEHSVKQFPELYIV---VCTVLAAPASSGGLERDFCMAGRRIRPDRTSLRPRHIEMSLFLNAN 201
E L +W +++ E ++ V + A P+SS +ERDFC++G + P RTSL I+M +FLN N
Sbjct: 101 ESVLQFWKR--LEESGEYRLIPKAVRVLFAIPSSSCQIERDFCVSGEMVSPQRTSLAGDSIDMCIFLNRN 168 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1855.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1855.1.1 >prot_P-wetherbeei_contig1855.1.1 ID=prot_P-wetherbeei_contig1855.1.1|Name=mRNA_P-wetherbeei_contig1855.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp EDALDWWNEHSVKQFPELYIVVCTVLAAPASSGGLERDFCMAGRRIRPDRback to top mRNA from alignment at P-wetherbeei_contig1855:54..296- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1855.1.1 ID=mRNA_P-wetherbeei_contig1855.1.1|Name=mRNA_P-wetherbeei_contig1855.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig1855:54..296- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1855:54..296- >mRNA_P-wetherbeei_contig1855.1.1 ID=mRNA_P-wetherbeei_contig1855.1.1|Name=mRNA_P-wetherbeei_contig1855.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig1855:54..296- (Phaeothamnion wetherbeei SAG_119_79)back to top |