mRNA_P-wetherbeei_contig1853.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1853.3.1 vs. uniprot
Match: D7G7W1_ECTSI (CMP/dCMP-type deaminase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7W1_ECTSI) HSP 1 Score: 112 bits (281), Expect = 2.100e-23 Identity = 53/81 (65.43%), Postives = 57/81 (70.37%), Query Frame = 2
Query: 1199 PAAALRSLDGGQYLCTGYDLYCTVEPCLMCSMALVHSRVRWVVYGTADRCGGCLGSVIKLHTLRPLNHNYRVFAGCCEREC 1441
P + L QYLCTG+DLY T EPCLMC+MALVHSRVR V+YG D GCLGSV LHTL LNHNYRVF G C EC
Sbjct: 268 PGGVVEVLSPEQYLCTGFDLYVTREPCLMCAMALVHSRVRRVIYGVRDTERGCLGSVTMLHTLTSLNHNYRVFEGVCADEC 348
BLAST of mRNA_P-wetherbeei_contig1853.3.1 vs. uniprot
Match: UPI00096B3065 (probable inactive tRNA-specific adenosine deaminase-like protein 3 n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B3065) HSP 1 Score: 100 bits (248), Expect = 2.850e-19 Identity = 44/74 (59.46%), Postives = 58/74 (78.38%), Query Frame = 2
Query: 1229 GQYLCTGYDLYCTVEPCLMCSMALVHSRVRWVVYGTADRCGGCLGSVIKLHTLRPLNHNYRVFAGCCERECAAL 1450
G YLCTGY LY T EPC+MC+MAL+HSR++ V+YG+ GG LG++ K+HT++ LNH+Y VFAG EREC +L
Sbjct: 266 GPYLCTGYYLYSTCEPCVMCAMALIHSRIKRVIYGSQSTNGG-LGTLCKIHTVKDLNHHYEVFAGLLERECQSL 338
BLAST of mRNA_P-wetherbeei_contig1853.3.1 vs. uniprot
Match: UPI00077A927A (probable inactive tRNA-specific adenosine deaminase-like protein 3 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A927A) HSP 1 Score: 96.7 bits (239), Expect = 4.180e-19 Identity = 45/72 (62.50%), Postives = 52/72 (72.22%), Query Frame = 2
Query: 1235 YLCTGYDLYCTVEPCLMCSMALVHSRVRWVVYGTADRCGGCLGSVIKLHTLRPLNHNYRVFAGCCERECAAL 1450
YLCTGYDLY T EPC+MC+MAL+HSR+R V YG ADR G LGS KLHT LNH++ VF G E +C L
Sbjct: 129 YLCTGYDLYTTREPCVMCAMALLHSRIRRVFYGCADRVQGALGSRYKLHTKTGLNHHFEVFYGILEDDCRHL 200
BLAST of mRNA_P-wetherbeei_contig1853.3.1 vs. uniprot
Match: A0A1B6C1I4_9HEMI (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6C1I4_9HEMI) HSP 1 Score: 99.0 bits (245), Expect = 5.730e-19 Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 2
Query: 1229 GQYLCTGYDLYCTVEPCLMCSMALVHSRVRWVVYGTADRCGGCLGSVIKLHTLRPLNHNYRVFAGCCERECAAL 1450
G YLCTGYD+Y T EPC MC+MAL+HSRVR V YG + + G LG++IKLHT+R LNH+Y VF G E EC +L
Sbjct: 252 GPYLCTGYDVYVTREPCQMCAMALIHSRVRRVFYGCSYK-NGALGTLIKLHTVRALNHHYEVFKGIYEHECQSL 324
BLAST of mRNA_P-wetherbeei_contig1853.3.1 vs. uniprot
Match: A0A6P8HEC4_ACTTE (probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HEC4_ACTTE) HSP 1 Score: 99.8 bits (247), Expect = 9.090e-19 Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = 2
Query: 1229 GQYLCTGYDLYCTVEPCLMCSMALVHSRVRWVVYGTADRCGGCLGSVIKLHTLRPLNHNYRVFAGCCERECAAL 1450
G YLCTGYDLY T EPC+MCSMALVHSR+R V YG D G LGS +LHT LNH++ VF G E+EC+ L
Sbjct: 330 GPYLCTGYDLYVTREPCIMCSMALVHSRIRRVFYGCKDPSVGALGSKYRLHTQDGLNHHFEVFCGILEKECSEL 403
BLAST of mRNA_P-wetherbeei_contig1853.3.1 vs. uniprot
Match: A0A1S3DUE6_DIACI (probable inactive tRNA-specific adenosine deaminase-like protein 3 n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3DUE6_DIACI) HSP 1 Score: 97.1 bits (240), Expect = 2.230e-18 Identity = 42/71 (59.15%), Postives = 54/71 (76.06%), Query Frame = 2
Query: 1229 GQYLCTGYDLYCTVEPCLMCSMALVHSRVRWVVYGTADRCGGCLGSVIKLHTLRPLNHNYRVFAGCCEREC 1441
G YLCTGYD+Y T+EPCLMC+MALVHSR + + YG ++ G LGS +KLH + LNH+Y+V+AG E EC
Sbjct: 238 GLYLCTGYDVYLTMEPCLMCAMALVHSRAKTIFYGCSNDIDGALGSKLKLHNVSNLNHHYQVYAGVLEFEC 308
BLAST of mRNA_P-wetherbeei_contig1853.3.1 vs. uniprot
Match: A0A067QE14_ZOONE (tRNA-specific adenosine deaminase-like protein 3 n=2 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067QE14_ZOONE) HSP 1 Score: 94.4 bits (233), Expect = 3.840e-18 Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 2
Query: 1205 AALRSLDGGQYLCTGYDLYCTVEPCLMCSMALVHSRVRWVVYGTADRCGGCLGSVIKLHTLRPLNHNYRVFAGCCEREC 1441
+A R G Y+CTGYD+Y T EPC MC+MALVHSRVR V YG G LG+ +KLHTL+ LNH+Y VFAG E++C
Sbjct: 136 SASREPKTGPYVCTGYDVYVTREPCPMCAMALVHSRVRRVFYGCPSP-QGALGTNVKLHTLKGLNHHYEVFAGILEKDC 213
BLAST of mRNA_P-wetherbeei_contig1853.3.1 vs. uniprot
Match: UPI00142557C1 (probable inactive tRNA-specific adenosine deaminase-like protein 3 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142557C1) HSP 1 Score: 95.9 bits (237), Expect = 5.660e-18 Identity = 44/72 (61.11%), Postives = 52/72 (72.22%), Query Frame = 2
Query: 1235 YLCTGYDLYCTVEPCLMCSMALVHSRVRWVVYGTADRCGGCLGSVIKLHTLRPLNHNYRVFAGCCERECAAL 1450
YLCTG DLYCT EPC+MC+MALVHSR+ V YG +D CG LG+ K+HT LNHN+ VF G E EC +L
Sbjct: 244 YLCTGLDLYCTREPCVMCAMALVHSRIGRVFYGASDPCGA-LGTQYKVHTKEGLNHNFEVFKGVLESECISL 314
BLAST of mRNA_P-wetherbeei_contig1853.3.1 vs. uniprot
Match: A0A1B6GPT7_9HEMI (tRNA-specific adenosine deaminase 2 n=2 Tax=Proconiini TaxID=565685 RepID=A0A1B6GPT7_9HEMI) HSP 1 Score: 95.9 bits (237), Expect = 5.930e-18 Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 2
Query: 1229 GQYLCTGYDLYCTVEPCLMCSMALVHSRVRWVVYGTADRCGGCLGSVIKLHTLRPLNHNYRVFAGCCERECAAL 1450
G YLCTGYD+Y T EPC MC+MALVHSRVR V YGT G LG+++KLHTL+ LNH+Y VF +EC L
Sbjct: 247 GPYLCTGYDVYVTREPCTMCAMALVHSRVRRVFYGTNSETGA-LGTLVKLHTLKDLNHHYEVFKNLLAQECGHL 319
BLAST of mRNA_P-wetherbeei_contig1853.3.1 vs. uniprot
Match: A0A1Y1L7P1_PHOPY (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1L7P1_PHOPY) HSP 1 Score: 95.9 bits (237), Expect = 9.370e-18 Identity = 43/74 (58.11%), Postives = 56/74 (75.68%), Query Frame = 2
Query: 1229 GQYLCTGYDLYCTVEPCLMCSMALVHSRVRWVVYGTADRCGGCLGSVIKLHTLRPLNHNYRVFAGCCERECAAL 1450
G YLCTGY LY T EPC+MCSMALVHSR++ V +G + GG LGS+ ++HT++ LNH+Y VF G E EC++L
Sbjct: 276 GPYLCTGYVLYVTREPCIMCSMALVHSRIKRVFFGAKNNSGG-LGSLCQIHTVKHLNHHYEVFGGLLEHECSSL 348 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1853.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1853.3.1 >prot_P-wetherbeei_contig1853.3.1 ID=prot_P-wetherbeei_contig1853.3.1|Name=mRNA_P-wetherbeei_contig1853.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=535bp MVDVADADPGVDASVDSIREVVDDSAELLASSLPRVVTVLASEVVPKDASback to top mRNA from alignment at P-wetherbeei_contig1853:4414..6299+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1853.3.1 ID=mRNA_P-wetherbeei_contig1853.3.1|Name=mRNA_P-wetherbeei_contig1853.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1886bp|location=Sequence derived from alignment at P-wetherbeei_contig1853:4414..6299+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1853:4414..6299+ >mRNA_P-wetherbeei_contig1853.3.1 ID=mRNA_P-wetherbeei_contig1853.3.1|Name=mRNA_P-wetherbeei_contig1853.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1605bp|location=Sequence derived from alignment at P-wetherbeei_contig1853:4414..6299+ (Phaeothamnion wetherbeei SAG_119_79)back to top |