mRNA_P-wetherbeei_contig18507.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18507.1.1 vs. uniprot
Match: A0A5D6Y7L1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7L1_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.160e-15 Identity = 42/95 (44.21%), Postives = 61/95 (64.21%), Query Frame = 1
Query: 7 RAFERYSLLLETRPMATKAATACVLAGLSDLVCQELQIRYEQQAASGSKGLAAFSMLG-VVIAPALHVWYSYMARLLPGTSAGSVVRRVALDQFV 288
RA+ +Y +LLETRP+ATK T +AG+ D+ CQ + E +K A F+ LG V I+P LHVWY ++ R++PGT++ + +RVALD V
Sbjct: 50 RAWTKYLVLLETRPLATKIVTGGAIAGIGDINCQ---LFLEHGKPFDAKRTAVFTFLGGVFISPILHVWYGFLGRVVPGTTSLAAAKRVALDVLV 141
BLAST of mRNA_P-wetherbeei_contig18507.1.1 vs. uniprot
Match: A0A1Z5JYC6_FISSO (Protein Mpv17 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYC6_FISSO) HSP 1 Score: 75.1 bits (183), Expect = 1.730e-14 Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 22 YSLLLETRPMATKAATACVLAGLSDLVCQELQIRYEQQAASGSKGLAAFSMLGVVIAPALHVWYSYMARLLPGTSAGSVVRRVALDQFVFTP 297
YS L+T P+ TK+ T+ ++AG+ D CQ Q Q ++ F + GV++ P +H+WY +A LPGT+ +V++RV LDQFVFTP
Sbjct: 31 YSHKLDTHPITTKSITSAIIAGIGDGACQYGQ--RNQSKWDVNRTGRFFVLGGVLVGPLIHLWYGVLATYLPGTAVTTVIKRVILDQFVFTP 120
BLAST of mRNA_P-wetherbeei_contig18507.1.1 vs. uniprot
Match: A0A1Z5KCH1_FISSO (Protein Mpv17 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KCH1_FISSO) HSP 1 Score: 75.1 bits (183), Expect = 1.910e-14 Identity = 38/92 (41.30%), Postives = 58/92 (63.04%), Query Frame = 1
Query: 22 YSLLLETRPMATKAATACVLAGLSDLVCQELQIRYEQQAASGSKGLAAFSMLGVVIAPALHVWYSYMARLLPGTSAGSVVRRVALDQFVFTP 297
YS L+T P+ TK+ T+ ++AG+ D CQ Q +Q ++ F + GV++ P +H+WY +A LPGT+ +V++RV LDQFVFTP
Sbjct: 38 YSHKLDTHPITTKSITSAIIAGIGDGACQYGQP--DQSRWDVNRTGRFFVLGGVLVGPLIHLWYGVLATYLPGTAVMTVIKRVLLDQFVFTP 127
BLAST of mRNA_P-wetherbeei_contig18507.1.1 vs. uniprot
Match: A0A1V9YRH4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YRH4_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 6.150e-14 Identity = 37/95 (38.95%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 13 FERYSLLLETRPMATKAATACVLAGLSDLVCQELQIRYEQQAASGSKGLAAFSMLGVVIAPALHVWYSYMARLLPGTSAGSVVRRVALDQFVFTP 297
++RY LLLET+P+ TK ++ +A D CQ + +E + + ++ GV IAP LHVWY ++ R + G +VV+R+ LDQFVF P
Sbjct: 29 WQRYLLLLETKPLPTKIISSAGIAAFGDFTCQTV---FEDHPFDTKRFMIFTTLGGVYIAPTLHVWYGFLNRAVTGVGKLAVVKRMMLDQFVFAP 120
BLAST of mRNA_P-wetherbeei_contig18507.1.1 vs. uniprot
Match: A0A7S0C1U0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1U0_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.050e-10 Identity = 34/95 (35.79%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 22 YSLLLETRPMATKAATACVLAGLSDLVCQELQIRYEQ--QAASGSKGLAAFSMLGVV-IAPALHVWYSYMARLLPGTSAGSVVRRVALDQFVFTP 297
YS L+ RP+ TK A+A ++AG +L+ Q L + Q K F ++ ++ +AP LH WY++++ +PG S V++RV +D+F+FTP
Sbjct: 22 YSHQLDVRPIFTKCASAGIVAGFGNLLAQRLMWDTDGKGQFVIDWKQAGRFVVINIIFVAPCLHHWYNWLSAAMPGKSIAPVLKRVFVDEFIFTP 116
BLAST of mRNA_P-wetherbeei_contig18507.1.1 vs. uniprot
Match: A0A7S3ZTZ1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTZ1_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.490e-10 Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 1
Query: 1 LGRAFERYSLLLETRPMATKAATACVLAGLSDLVCQELQIRYEQQAASGSKGLAAFSMLGVVIAPALHVWYSYMARLLPGTSAGSVVRRVALDQFVFTP 297
LG A + Y+ ++ P+ATKAAT+ V+ G SD Q+L+ E A ++ L ++ G+ APA HVWY+ + RL+P ++ + L Q F P
Sbjct: 25 LGAAAQTYARCMDKAPLATKAATSAVIFGASDACAQKLERVKEPDA---TRLLTTTAIGGLYFAPAAHVWYAQITRLIPKNGLKEILTKALLGQIFFGP 120
BLAST of mRNA_P-wetherbeei_contig18507.1.1 vs. uniprot
Match: F2U163_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U163_SALR5) HSP 1 Score: 60.5 bits (145), Expect = 1.170e-8 Identity = 32/93 (34.41%), Postives = 52/93 (55.91%), Query Frame = 1
Query: 22 YSLLLETRPMATKAATACVLAGLSDLVCQELQIRYEQQAASGSKGLAAFSML-GVVIAPALHVWYSYMARLLPGTSAGSVVRRVALDQFVFTP 297
Y+ +L+ P+ TK TA ++ DL+ Q +Q + +K F +L +AP LH+WY+ +AR + G +VR++ALDQF+F P
Sbjct: 121 YTTMLKKHPLPTKTVTAAIIGLCGDLLAQNIQGSFPLDWVRTTK----FVLLQAAFVAPILHIWYNVLARAVKGRGVMLMVRKLALDQFMFAP 209
BLAST of mRNA_P-wetherbeei_contig18507.1.1 vs. uniprot
Match: UPI0008F9C29B (mpv17-like protein 2 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9C29B) HSP 1 Score: 57.4 bits (137), Expect = 6.390e-8 Identity = 30/91 (32.97%), Postives = 49/91 (53.85%), Query Frame = 1
Query: 25 SLLLETRPMATKAATACVLAGLSDLVCQELQIRYEQQAASGSKGLAAFSMLGVVIAPALHVWYSYMARLLPGTSAGSVVRRVALDQFVFTP 297
SLL M T + L+G+ D++ Q + +E S + L ++ GV + H WY Y+ +LPGT+ +VV++V LDQ V++P
Sbjct: 11 SLLFSKYLMVTNVGLSGTLSGVGDIIEQRQEAHFEGSKWSPRRTLN-LTISGVTVGVVCHTWYKYLESILPGTTMRTVVKKVLLDQLVYSP 100
BLAST of mRNA_P-wetherbeei_contig18507.1.1 vs. uniprot
Match: A0A6H5JL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL95_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 2.030e-7 Identity = 25/45 (55.56%), Postives = 34/45 (75.56%), Query Frame = 1
Query: 166 FSMLGV-VIAPALHVWYSYMARLLPGTSAGSVVRRVALDQFVFTP 297
F+ +G V+APALH WY ++ R LPGT+ +VV+RVALDQ +F P
Sbjct: 149 FTFVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAP 193
BLAST of mRNA_P-wetherbeei_contig18507.1.1 vs. uniprot
Match: A0A2R5GPQ5_9STRA (Protein SYM1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPQ5_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 7.290e-7 Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 157 LAAFSMLG-VVIAPALHVWYSYMARLLPGTSAGSVVRRVALDQFVFTP 297
LA FS+LG V++ P LHVWY Y+ + G S + ++RV LDQ VFTP
Sbjct: 91 LARFSLLGGVLVGPTLHVWYGYLGTRIAGRSLAATIKRVVLDQAVFTP 138 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18507.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18507.1.1 >prot_P-wetherbeei_contig18507.1.1 ID=prot_P-wetherbeei_contig18507.1.1|Name=mRNA_P-wetherbeei_contig18507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp LGRAFERYSLLLETRPMATKAATACVLAGLSDLVCQELQIRYEQQAASGSback to top mRNA from alignment at P-wetherbeei_contig18507:762..1142+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18507.1.1 ID=mRNA_P-wetherbeei_contig18507.1.1|Name=mRNA_P-wetherbeei_contig18507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig18507:762..1142+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18507:762..1142+ >mRNA_P-wetherbeei_contig18507.1.1 ID=mRNA_P-wetherbeei_contig18507.1.1|Name=mRNA_P-wetherbeei_contig18507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig18507:762..1142+ (Phaeothamnion wetherbeei SAG_119_79)back to top |