mRNA_P-wetherbeei_contig18494.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18494.1.1
Unique NamemRNA_P-wetherbeei_contig18494.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: D7FP16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP16_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 1.110e-81
Identity = 146/204 (71.57%), Postives = 166/204 (81.37%), Query Frame = 1
Query:    4 VPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKRRVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
            VPRQLERLLLFGM++CLDTFLYVTTFLP+RI  G   ++ ++ TR  R  + R  +YD MRGA    +L  LQ ++MSR VYHYIRGQAM+KLYVLIAM+EIFDKLMCSFGQDALDSLY S  + +KRRV +HF +V V A LHSLLLFVH+TTLTVAVNS DQALL LLISNNFAEIK SVFKKFDK NLFQLSCHD+V R K
Sbjct:  682 VPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIGVVSSLFSLLTRRRRPSVNRPLVYDWMRGATFAAALGSLQFLEMSR-VYHYIRGQAMVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKKRRVLVHFTIVCVTACLHSLLLFVHVTTLTVAVNSSDQALLTLLISNNFAEIKSSVFKKFDKHNLFQLSCHDVVERFK 884          
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: A0A835YQB0_9STRA (Eukaryotic membrane protein family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB0_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.900e-66
Identity = 114/148 (77.03%), Postives = 125/148 (84.46%), Query Frame = 1
Query:  172 YDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKRRVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
            YD MRGA+M   L +LQ+V MSR VYHYIRGQ+MIKLYVLI M+EIFDKLMCSFGQDALDSLYWS   S+KR   L+F +V + + LHSLLLFVHITTLTVAVNS DQALL LLISNNFAEIK +VFKKFDKQNLFQLSCHDIV R K
Sbjct:    7 YDCMRGAMMAQCLWLLQHVQMSR-VYHYIRGQSMIKLYVLIGMVEIFDKLMCSFGQDALDSLYWSTMRSKKRLTLLNFVIVCIQSTLHSLLLFVHITTLTVAVNSSDQALLTLLISNNFAEIKSAVFKKFDKQNLFQLSCHDIVERFK 153          
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: A0A662WLZ5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLZ5_9STRA)

HSP 1 Score: 206 bits (524), Expect = 6.210e-61
Identity = 121/207 (58.45%), Postives = 149/207 (71.98%), Query Frame = 1
Query:    1 AVPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
            AVPR  E+L LFG+++ LD+FLYV T+LPLRI      AV +  + H R    R+  YD M   ++ +  VVL +VDMSR VYH IRGQAMIKLYVL  MIEIFD+L  S GQD LDSLY++A+   +R  R+FL FAV  +Y VLH+LLLF  + TL VAVNS + +LL LLISNNFAE+K SVFKKF++QNLFQ+SC DIV R K
Sbjct:  110 AVPRNTEQLFLFGVLLALDSFLYVFTYLPLRILFACGCAVTS--SFHTRV-FRRTHFYDLMVAVIVAVGTVVLGHVDMSR-VYHSIRGQAMIKLYVLFTMIEIFDRLFSSLGQDVLDSLYYTAKYQPRRVTRMFLDFAVAIIYVVLHALLLFAQVVTLNVAVNSSNTSLLTLLISNNFAELKSSVFKKFEEQNLFQVSCSDIVERFK 312          
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: G4ZK70_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZK70_PHYSP)

HSP 1 Score: 201 bits (510), Expect = 2.180e-58
Identity = 120/206 (58.25%), Postives = 145/206 (70.39%), Query Frame = 1
Query:    4 VPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
            VP   E+L  FG+++ LD+FLYV T+LPLRI      AV +  + H R  L R+  YD M   ++ +   VL NVDMSR VYH IRGQAMIKLYVL  MIEIFD+L  S GQD LDSLY++A+   +R  R+FL F V  VY VLHSLLLF  + TL VAVNS + +LL LLISNNFAE+K SVFKKF++QNLFQ+SC DIV R K
Sbjct:  162 VPVNTEQLFFFGVLLALDSFLYVFTYLPLRILFACGCAVTS--SFHTRV-LRRTHFYDLMVAVIVAVGTSVLLNVDMSR-VYHAIRGQAMIKLYVLFTMIEIFDRLFSSLGQDILDSLYYTAKYHPRRVTRMFLDFTVAIVYVVLHSLLLFAQVVTLNVAVNSSNTSLLTLLISNNFAELKSSVFKKFEEQNLFQISCSDIVERFK 363          
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: A0A225W063_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W063_9STRA)

HSP 1 Score: 201 bits (511), Expect = 4.270e-58
Identity = 119/206 (57.77%), Postives = 147/206 (71.36%), Query Frame = 1
Query:    4 VPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
            VP   E+L LFG+++ LD+FLYV T+LPLRI      AV +  + H R    R+  YD M   ++ +  +VL +VDMSR VYH IRGQAMIKLYVL  MIEIFD+L  S GQD LDSLY++A+   +R  R+FL FAV  +Y VLHSLLLF  + TL VAVNS + +LL LLISNNFAE+K SVFKKF++QNLFQ+SC DIV R K
Sbjct:  199 VPLNTEQLFLFGVLLALDSFLYVFTYLPLRILFACGCAVTS--SFHTRV-FRRTHFYDLMVAVIISVGTMVLGHVDMSR-VYHAIRGQAMIKLYVLFTMIEIFDRLFSSLGQDVLDSLYYTAKYHPRRVTRMFLDFAVAIIYVVLHSLLLFAQVVTLNVAVNSSNTSLLTLLISNNFAELKSSVFKKFEEQNLFQISCSDIVERFK 400          
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: D0NR04_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0NR04_PHYIT)

HSP 1 Score: 199 bits (507), Expect = 5.580e-58
Identity = 119/206 (57.77%), Postives = 145/206 (70.39%), Query Frame = 1
Query:    4 VPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
            VP   E+L LFG+++ LD+FLYV T+LPLRI      AV +  + HAR    R+  YD M   ++ +   VL  VDMSR VYH IRGQAMIKLYVL  MIEIFD+L  S GQD LDSLY++A+   +R  R+FL FAV   Y VLH+LLLF  + TL VAVNS + +LL LLISNNFAE+K SVFKKF++QNLFQ+SC DIV R K
Sbjct:  158 VPLNTEQLFLFGVLLALDSFLYVFTYLPLRILFACGCAVTS--SFHARV-FRRTHFYDLMVAVIIAVGTTVLGYVDMSR-VYHAIRGQAMIKLYVLFTMIEIFDRLFSSLGQDVLDSLYYTAKYHPRRVTRMFLDFAVAITYVVLHALLLFAQVVTLNVAVNSSNTSLLTLLISNNFAELKSSVFKKFEEQNLFQISCSDIVERFK 359          
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: A0A6H5KZ60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ60_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 7.020e-58
Identity = 111/178 (62.36%), Postives = 122/178 (68.54%), Query Frame = 1
Query:  181 MRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDK---------------------------------LMCSFGQDALDSLYWSARNSRKRRVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
            MRGA    +L  LQ ++MSR VYHYIRGQAM+KLYVLIAM+EIFDK                                 LMCSFGQDALDSLY S  + +KRRV +HF +V V A LHSLLLFVH+TTLTVAVNS DQALL LLISNNFAEIK SVFKKFDK NLFQLSCHD+V R K
Sbjct:    1 MRGATFAAALGSLQFLEMSR-VYHYIRGQAMVKLYVLIAMVEIFDKASRFNGGVWFGPHVWLEPTAKYDTLTLLGCLRKLMCSFGQDALDSLYLSTVHKKKRRVLVHFTIVCVTACLHSLLLFVHVTTLTVAVNSSDQALLTLLISNNFAEIKSSVFKKFDKHNLFQLSCHDVVERFK 177          
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: A0A024TUS5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUS5_9STRA)

HSP 1 Score: 194 bits (494), Expect = 7.550e-58
Identity = 110/204 (53.92%), Postives = 148/204 (72.55%), Query Frame = 1
Query:   13 QLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAV-ATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
            ++E+L+++G+++C+D+FLYV T+LPLRI       VV+V  TR  R    RS ++D +   +MVLS  VL  VDMSR VYH IRGQA+IKLYVL  M+EIFDKL  S GQD LD++Y++ R   +R  R+   FAV ++Y VLHSLLLF  + T+ VA++S   +L+ LLISNNFAE+K SVFKKF++QNLFQ++C DIV R K
Sbjct:  121 EMEKLVIYGLVLCVDSFLYVFTYLPLRILLALGSGVVSVFCTRIFR----RSHVHDVLTAVIMVLSTAVLMQVDMSR-VYHLIRGQALIKLYVLFTMLEIFDKLFSSLGQDVLDAMYFTVRYQPRRVGRMMFDFAVCSIYVVLHSLLLFGQVVTINVAIHSSSSSLMTLLISNNFAELKSSVFKKFEEQNLFQVACSDIVERFK 319          
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: H3HCB3_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=H3HCB3_PHYRM)

HSP 1 Score: 192 bits (489), Expect = 6.150e-57
Identity = 117/200 (58.50%), Postives = 140/200 (70.00%), Query Frame = 1
Query:   25 LLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVA-VATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
            L LFG+++ LD+FLY  T+LPLRI      AV +   TR  R    R+  YD M   +M +   VL  VDMSR VYH IRGQAMIKLYVL  MIEIFD+L  S GQD LDSLY++A+   +R  R+FL FAV  +Y VLHSLLLF  + TL VAVNS + +LL LLISNNFAE+K SVFKKF++QNLFQ+SC DIV R K
Sbjct:    2 LFLFGVLLALDSFLYAFTYLPLRILFACGCAVTSGFHTRVFR----RTHFYDLMVAVIMAVGTTVLWYVDMSR-VYHAIRGQAMIKLYVLFTMIEIFDRLFSSLGQDVLDSLYYTAKYQPRRVTRMFLDFAVAIIYVVLHSLLLFTQVVTLNVAVNSSNTSLLTLLISNNFAELKSSVFKKFEEQNLFQISCSDIVERFK 196          
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: A0A3M6V9N5_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9N5_9STRA)

HSP 1 Score: 197 bits (502), Expect = 7.420e-57
Identity = 116/207 (56.04%), Postives = 145/207 (70.05%), Query Frame = 1
Query:    4 VPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGRL-TRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
            VP   E+L LFG+++ LD+FLYV T++PLRI      AV    T   + R+  R+  YD M   +M +   VL +VDMSR VYH IRGQAMIKLYVL  MIEIFD+L  SFGQD LDSLY++++   +R  R+FL FAV  +Y VLHSLLLF  + T+ VAVNS + +LL LLI NNF E+K SVFKKF++QNLFQ+SC DIV R K
Sbjct:  205 VPFNTEKLFLFGVLLALDSFLYVFTYMPLRILFACGCAV----TSSFQARVFRRTHFYDLMVAVIMTVGTTVLGHVDMSR-VYHAIRGQAMIKLYVLFTMIEIFDRLFSSFGQDVLDSLYYTSKYYPRRVMRMFLDFAVAIIYVVLHSLLLFAQVVTMNVAVNSSNTSLLTLLIFNNFTELKSSVFKKFEEQNLFQISCSDIVERFK 406          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP16_ECTSI1.110e-8171.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YQB0_9STRA1.900e-6677.03Eukaryotic membrane protein family-domain-containi... [more]
A0A662WLZ5_9STRA6.210e-6158.45Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
G4ZK70_PHYSP2.180e-5858.25Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A225W063_9STRA4.270e-5857.77Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
D0NR04_PHYIT5.580e-5857.77Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A6H5KZ60_9PHAE7.020e-5862.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024TUS5_9STRA7.550e-5853.92Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
H3HCB3_PHYRM6.150e-5758.50Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A3M6V9N5_9STRA7.420e-5756.04Uncharacterized protein n=2 Tax=Peronospora effusa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18494contigP-wetherbeei_contig18494:147..1291 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FP16
Preferred nameTAPT1
PFAMsDUF747
Model size615
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0001501,GO:0001503,GO:0001701,GO:0003006,GO:0003674,GO:0004888,GO:0004930,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005788,GO:0005789,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0006457,GO:0006935,GO:0007154,GO:0007165,GO:0007186,GO:0007275,GO:0008104,GO:0008150,GO:0009605,GO:0009790,GO:0009791,GO:0009792,GO:0009793,GO:0009856,GO:0009888,GO:0009987,GO:0010154,GO:0010183,GO:0010638,GO:0012505,GO:0014031,GO:0014032,GO:0014033,GO:0015630,GO:0016020,GO:0016021,GO:0016520,GO:0022414,GO:0023052,GO:0030154,GO:0030176,GO:0031224,GO:0031227,GO:0031344,GO:0031346,GO:0031974,GO:0031984,GO:0032501,GO:0032502,GO:0032507,GO:0033036,GO:0033043,GO:0033365,GO:0034613,GO:0034975,GO:0035437,GO:0036064,GO:0038023,GO:0040011,GO:0042175,GO:0042221,GO:0042330,GO:0042995,GO:0043009,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044432,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044706,GO:0045185,GO:0045724,GO:0048316,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048608,GO:0048706,GO:0048731,GO:0048762,GO:0048856,GO:0048863,GO:0048864,GO:0048868,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0050918,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051235,GO:0051239,GO:0051240,GO:0051641,GO:0051651,GO:0051704,GO:0051716,GO:0060089,GO:0060485,GO:0060491,GO:0061035,GO:0061036,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070972,GO:0071944,GO:0072595,GO:0098827,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120038,GO:1902017,GO:1902115,GO:1902117,GO:1903010,GO:1903012,GO:1904888,GO:2000026
Exons3
Evalue1.82e-82
EggNOG OGsKOG2490@1|root,KOG2490@2759|Eukaryota
Ec32 ortholog descriptionMembrane protein,Tapt1/CMV receptor
Ec32 orthologEc-05_001770.1
Descriptionpositive regulation of bone development
Cds size615
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186147.8757894-CDS-P-wetherbeei_contig18494:146..4431683186147.8757894-CDS-P-wetherbeei_contig18494:146..443Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18494 147..443 -
1683186147.8880773-CDS-P-wetherbeei_contig18494:683..7621683186147.8880773-CDS-P-wetherbeei_contig18494:683..762Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18494 684..762 -
1683186147.8969557-CDS-P-wetherbeei_contig18494:1052..12911683186147.8969557-CDS-P-wetherbeei_contig18494:1052..1291Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18494 1053..1291 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18494.1.1prot_P-wetherbeei_contig18494.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18494 147..1291 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18494.1.1

>prot_P-wetherbeei_contig18494.1.1 ID=prot_P-wetherbeei_contig18494.1.1|Name=mRNA_P-wetherbeei_contig18494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=205bp
AVPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARG
RLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAM
IEIFDKLMCSFGQDALDSLYWSARNSRKRRVFLHFAVVAVYAVLHSLLLF
VHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDI
VVRDK
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mRNA from alignment at P-wetherbeei_contig18494:147..1291-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18494.1.1 ID=mRNA_P-wetherbeei_contig18494.1.1|Name=mRNA_P-wetherbeei_contig18494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1145bp|location=Sequence derived from alignment at P-wetherbeei_contig18494:147..1291- (Phaeothamnion wetherbeei SAG_119_79)
GCAGTCCCGCGGCAGCTGGAGAGGCTGCTGCTTTTTGGCATGATCATCTG CCTCGACACCTTCCTCTACGTCACCACCTTCTTGCCGTTGCGCATCGCCC ACGGTGCCGCCATGGCGGTCGTGGCGGTGGCGACACGGCATGCCCGCGGC CGGCTGACGCGTAGCGCGCTTTACGACGCAATGCGCGGGGCGCTGATGGT GCTGAGCCTCGTCGTGCTGCAGAACGTCGACATGTCGCGGTGAGTGGACG TAGGGGTCAAGCGGGCGACTTGATCAACTGGTCAACAGTTATTTCTCTTT CCATTGTTGCGGTTTCTGTTTTGCGTTTACTGCTTCTTTGTTGGATTCTG TTTTGCGTTGGACTATTGTTTTCCGAACGGGTTAAGCTAGGCCTTCCGTA TACTCTTGTTACCTGGTTTTGTTATGGCCGTCTTGTGACAGTGCGCACAA CTCGTCTGACGGCTCCTCATCTTTCTTCTCTGTCGCTTCTTTCCGCGCTG GCTGGCGTCTGCGACCTTCCTCGACCGAGCAGGGTGTATCACTACATCCG GGGCCAGGCGATGATCAAGCTCTACGTTCTTATCGCCATGATCGAAATCT TCGACAAGGTGCGGTGACGCGGCGAGGCTACGCAGTGGCGGCGATTTTCG AGGCAGCGCTTCACCGCCTGGAGGCTGCTTGCTATTGAATGGGCCTCGGG AGAGAAGGCTGCCGTGATGTAGAAGAGCCAATGCTGCCATTGACATGTCA TCAAACGGTCTGTCAACATTCCTTAACCTACACCTTTTTTTCTGTTTCTG GAAAATGCGCATTGCGGTTCTGCTCCACCCGGCACCGGACGTGCACAGCT GATGTGCTCGTTCGGCCAGGATGCGCTGGACTCGCTGTACTGGAGCGCGC GCAACAGCCGCAAGCGGCGCGTCTTCCTGCACTTTGCCGTGGTGGCGGTG TACGCCGTGCTGCACTCGCTGTTGCTGTTTGTACACATCACGACATTGAC GGTGGCCGTCAACTCGGACGACCAGGCGCTGCTGGCGCTTCTCATCAGCA ACAACTTCGCCGAGATCAAGGGCTCCGTCTTCAAGAAGTTCGACAAGCAG AACCTCTTCCAACTGTCGTGTCACGATATTGTTGTGCGTGATAAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18494:147..1291-

>mRNA_P-wetherbeei_contig18494.1.1 ID=mRNA_P-wetherbeei_contig18494.1.1|Name=mRNA_P-wetherbeei_contig18494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=615bp|location=Sequence derived from alignment at P-wetherbeei_contig18494:147..1291- (Phaeothamnion wetherbeei SAG_119_79)
GCAGTCCCGCGGCAGCTGGAGAGGCTGCTGCTTTTTGGCATGATCATCTG
CCTCGACACCTTCCTCTACGTCACCACCTTCTTGCCGTTGCGCATCGCCC
ACGGTGCCGCCATGGCGGTCGTGGCGGTGGCGACACGGCATGCCCGCGGC
CGGCTGACGCGTAGCGCGCTTTACGACGCAATGCGCGGGGCGCTGATGGT
GCTGAGCCTCGTCGTGCTGCAGAACGTCGACATGTCGCGCAGGGTGTATC
ACTACATCCGGGGCCAGGCGATGATCAAGCTCTACGTTCTTATCGCCATG
ATCGAAATCTTCGACAAGCTGATGTGCTCGTTCGGCCAGGATGCGCTGGA
CTCGCTGTACTGGAGCGCGCGCAACAGCCGCAAGCGGCGCGTCTTCCTGC
ACTTTGCCGTGGTGGCGGTGTACGCCGTGCTGCACTCGCTGTTGCTGTTT
GTACACATCACGACATTGACGGTGGCCGTCAACTCGGACGACCAGGCGCT
GCTGGCGCTTCTCATCAGCAACAACTTCGCCGAGATCAAGGGCTCCGTCT
TCAAGAAGTTCGACAAGCAGAACCTCTTCCAACTGTCGTGTCACGATATT
GTTGTGCGTGATAAA
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