mRNA_P-wetherbeei_contig18494.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: D7FP16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP16_ECTSI) HSP 1 Score: 272 bits (695), Expect = 1.110e-81 Identity = 146/204 (71.57%), Postives = 166/204 (81.37%), Query Frame = 1
Query: 4 VPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKRRVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
VPRQLERLLLFGM++CLDTFLYVTTFLP+RI G ++ ++ TR R + R +YD MRGA +L LQ ++MSR VYHYIRGQAM+KLYVLIAM+EIFDKLMCSFGQDALDSLY S + +KRRV +HF +V V A LHSLLLFVH+TTLTVAVNS DQALL LLISNNFAEIK SVFKKFDK NLFQLSCHD+V R K
Sbjct: 682 VPRQLERLLLFGMLVCLDTFLYVTTFLPIRIVIGVVSSLFSLLTRRRRPSVNRPLVYDWMRGATFAAALGSLQFLEMSR-VYHYIRGQAMVKLYVLIAMVEIFDKLMCSFGQDALDSLYLSTVHKKKRRVLVHFTIVCVTACLHSLLLFVHVTTLTVAVNSSDQALLTLLISNNFAEIKSSVFKKFDKHNLFQLSCHDVVERFK 884
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: A0A835YQB0_9STRA (Eukaryotic membrane protein family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB0_9STRA) HSP 1 Score: 217 bits (552), Expect = 1.900e-66 Identity = 114/148 (77.03%), Postives = 125/148 (84.46%), Query Frame = 1
Query: 172 YDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKRRVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
YD MRGA+M L +LQ+V MSR VYHYIRGQ+MIKLYVLI M+EIFDKLMCSFGQDALDSLYWS S+KR L+F +V + + LHSLLLFVHITTLTVAVNS DQALL LLISNNFAEIK +VFKKFDKQNLFQLSCHDIV R K
Sbjct: 7 YDCMRGAMMAQCLWLLQHVQMSR-VYHYIRGQSMIKLYVLIGMVEIFDKLMCSFGQDALDSLYWSTMRSKKRLTLLNFVIVCIQSTLHSLLLFVHITTLTVAVNSSDQALLTLLISNNFAEIKSAVFKKFDKQNLFQLSCHDIVERFK 153
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: A0A662WLZ5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLZ5_9STRA) HSP 1 Score: 206 bits (524), Expect = 6.210e-61 Identity = 121/207 (58.45%), Postives = 149/207 (71.98%), Query Frame = 1
Query: 1 AVPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
AVPR E+L LFG+++ LD+FLYV T+LPLRI AV + + H R R+ YD M ++ + VVL +VDMSR VYH IRGQAMIKLYVL MIEIFD+L S GQD LDSLY++A+ +R R+FL FAV +Y VLH+LLLF + TL VAVNS + +LL LLISNNFAE+K SVFKKF++QNLFQ+SC DIV R K
Sbjct: 110 AVPRNTEQLFLFGVLLALDSFLYVFTYLPLRILFACGCAVTS--SFHTRV-FRRTHFYDLMVAVIVAVGTVVLGHVDMSR-VYHSIRGQAMIKLYVLFTMIEIFDRLFSSLGQDVLDSLYYTAKYQPRRVTRMFLDFAVAIIYVVLHALLLFAQVVTLNVAVNSSNTSLLTLLISNNFAELKSSVFKKFEEQNLFQVSCSDIVERFK 312
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: G4ZK70_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4ZK70_PHYSP) HSP 1 Score: 201 bits (510), Expect = 2.180e-58 Identity = 120/206 (58.25%), Postives = 145/206 (70.39%), Query Frame = 1
Query: 4 VPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
VP E+L FG+++ LD+FLYV T+LPLRI AV + + H R L R+ YD M ++ + VL NVDMSR VYH IRGQAMIKLYVL MIEIFD+L S GQD LDSLY++A+ +R R+FL F V VY VLHSLLLF + TL VAVNS + +LL LLISNNFAE+K SVFKKF++QNLFQ+SC DIV R K
Sbjct: 162 VPVNTEQLFFFGVLLALDSFLYVFTYLPLRILFACGCAVTS--SFHTRV-LRRTHFYDLMVAVIVAVGTSVLLNVDMSR-VYHAIRGQAMIKLYVLFTMIEIFDRLFSSLGQDILDSLYYTAKYHPRRVTRMFLDFTVAIVYVVLHSLLLFAQVVTLNVAVNSSNTSLLTLLISNNFAELKSSVFKKFEEQNLFQISCSDIVERFK 363
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: A0A225W063_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W063_9STRA) HSP 1 Score: 201 bits (511), Expect = 4.270e-58 Identity = 119/206 (57.77%), Postives = 147/206 (71.36%), Query Frame = 1
Query: 4 VPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
VP E+L LFG+++ LD+FLYV T+LPLRI AV + + H R R+ YD M ++ + +VL +VDMSR VYH IRGQAMIKLYVL MIEIFD+L S GQD LDSLY++A+ +R R+FL FAV +Y VLHSLLLF + TL VAVNS + +LL LLISNNFAE+K SVFKKF++QNLFQ+SC DIV R K
Sbjct: 199 VPLNTEQLFLFGVLLALDSFLYVFTYLPLRILFACGCAVTS--SFHTRV-FRRTHFYDLMVAVIISVGTMVLGHVDMSR-VYHAIRGQAMIKLYVLFTMIEIFDRLFSSLGQDVLDSLYYTAKYHPRRVTRMFLDFAVAIIYVVLHSLLLFAQVVTLNVAVNSSNTSLLTLLISNNFAELKSSVFKKFEEQNLFQISCSDIVERFK 400
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: D0NR04_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0NR04_PHYIT) HSP 1 Score: 199 bits (507), Expect = 5.580e-58 Identity = 119/206 (57.77%), Postives = 145/206 (70.39%), Query Frame = 1
Query: 4 VPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
VP E+L LFG+++ LD+FLYV T+LPLRI AV + + HAR R+ YD M ++ + VL VDMSR VYH IRGQAMIKLYVL MIEIFD+L S GQD LDSLY++A+ +R R+FL FAV Y VLH+LLLF + TL VAVNS + +LL LLISNNFAE+K SVFKKF++QNLFQ+SC DIV R K
Sbjct: 158 VPLNTEQLFLFGVLLALDSFLYVFTYLPLRILFACGCAVTS--SFHARV-FRRTHFYDLMVAVIIAVGTTVLGYVDMSR-VYHAIRGQAMIKLYVLFTMIEIFDRLFSSLGQDVLDSLYYTAKYHPRRVTRMFLDFAVAITYVVLHALLLFAQVVTLNVAVNSSNTSLLTLLISNNFAELKSSVFKKFEEQNLFQISCSDIVERFK 359
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: A0A6H5KZ60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ60_9PHAE) HSP 1 Score: 190 bits (482), Expect = 7.020e-58 Identity = 111/178 (62.36%), Postives = 122/178 (68.54%), Query Frame = 1
Query: 181 MRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDK---------------------------------LMCSFGQDALDSLYWSARNSRKRRVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
MRGA +L LQ ++MSR VYHYIRGQAM+KLYVLIAM+EIFDK LMCSFGQDALDSLY S + +KRRV +HF +V V A LHSLLLFVH+TTLTVAVNS DQALL LLISNNFAEIK SVFKKFDK NLFQLSCHD+V R K
Sbjct: 1 MRGATFAAALGSLQFLEMSR-VYHYIRGQAMVKLYVLIAMVEIFDKASRFNGGVWFGPHVWLEPTAKYDTLTLLGCLRKLMCSFGQDALDSLYLSTVHKKKRRVLVHFTIVCVTACLHSLLLFVHVTTLTVAVNSSDQALLTLLISNNFAEIKSSVFKKFDKHNLFQLSCHDVVERFK 177
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: A0A024TUS5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUS5_9STRA) HSP 1 Score: 194 bits (494), Expect = 7.550e-58 Identity = 110/204 (53.92%), Postives = 148/204 (72.55%), Query Frame = 1
Query: 13 QLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAV-ATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
++E+L+++G+++C+D+FLYV T+LPLRI VV+V TR R RS ++D + +MVLS VL VDMSR VYH IRGQA+IKLYVL M+EIFDKL S GQD LD++Y++ R +R R+ FAV ++Y VLHSLLLF + T+ VA++S +L+ LLISNNFAE+K SVFKKF++QNLFQ++C DIV R K
Sbjct: 121 EMEKLVIYGLVLCVDSFLYVFTYLPLRILLALGSGVVSVFCTRIFR----RSHVHDVLTAVIMVLSTAVLMQVDMSR-VYHLIRGQALIKLYVLFTMLEIFDKLFSSLGQDVLDAMYFTVRYQPRRVGRMMFDFAVCSIYVVLHSLLLFGQVVTINVAIHSSSSSLMTLLISNNFAELKSSVFKKFEEQNLFQVACSDIVERFK 319
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: H3HCB3_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=H3HCB3_PHYRM) HSP 1 Score: 192 bits (489), Expect = 6.150e-57 Identity = 117/200 (58.50%), Postives = 140/200 (70.00%), Query Frame = 1
Query: 25 LLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVA-VATRHARGRLTRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
L LFG+++ LD+FLY T+LPLRI AV + TR R R+ YD M +M + VL VDMSR VYH IRGQAMIKLYVL MIEIFD+L S GQD LDSLY++A+ +R R+FL FAV +Y VLHSLLLF + TL VAVNS + +LL LLISNNFAE+K SVFKKF++QNLFQ+SC DIV R K
Sbjct: 2 LFLFGVLLALDSFLYAFTYLPLRILFACGCAVTSGFHTRVFR----RTHFYDLMVAVIMAVGTTVLWYVDMSR-VYHAIRGQAMIKLYVLFTMIEIFDRLFSSLGQDVLDSLYYTAKYQPRRVTRMFLDFAVAIIYVVLHSLLLFTQVVTLNVAVNSSNTSLLTLLISNNFAELKSSVFKKFEEQNLFQISCSDIVERFK 196
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Match: A0A3M6V9N5_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9N5_9STRA) HSP 1 Score: 197 bits (502), Expect = 7.420e-57 Identity = 116/207 (56.04%), Postives = 145/207 (70.05%), Query Frame = 1
Query: 4 VPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGRL-TRSALYDAMRGALMVLSLVVLQNVDMSRRVYHYIRGQAMIKLYVLIAMIEIFDKLMCSFGQDALDSLYWSARNSRKR--RVFLHFAVVAVYAVLHSLLLFVHITTLTVAVNSDDQALLALLISNNFAEIKGSVFKKFDKQNLFQLSCHDIVVRDK 615
VP E+L LFG+++ LD+FLYV T++PLRI AV T + R+ R+ YD M +M + VL +VDMSR VYH IRGQAMIKLYVL MIEIFD+L SFGQD LDSLY++++ +R R+FL FAV +Y VLHSLLLF + T+ VAVNS + +LL LLI NNF E+K SVFKKF++QNLFQ+SC DIV R K
Sbjct: 205 VPFNTEKLFLFGVLLALDSFLYVFTYMPLRILFACGCAV----TSSFQARVFRRTHFYDLMVAVIMTVGTTVLGHVDMSR-VYHAIRGQAMIKLYVLFTMIEIFDRLFSSFGQDVLDSLYYTSKYYPRRVMRMFLDFAVAIIYVVLHSLLLFAQVVTMNVAVNSSNTSLLTLLIFNNFTELKSSVFKKFEEQNLFQISCSDIVERFK 406 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18494.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18494.1.1 >prot_P-wetherbeei_contig18494.1.1 ID=prot_P-wetherbeei_contig18494.1.1|Name=mRNA_P-wetherbeei_contig18494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=205bp AVPRQLERLLLFGMIICLDTFLYVTTFLPLRIAHGAAMAVVAVATRHARGback to top mRNA from alignment at P-wetherbeei_contig18494:147..1291- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18494.1.1 ID=mRNA_P-wetherbeei_contig18494.1.1|Name=mRNA_P-wetherbeei_contig18494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1145bp|location=Sequence derived from alignment at P-wetherbeei_contig18494:147..1291- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18494:147..1291- >mRNA_P-wetherbeei_contig18494.1.1 ID=mRNA_P-wetherbeei_contig18494.1.1|Name=mRNA_P-wetherbeei_contig18494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=615bp|location=Sequence derived from alignment at P-wetherbeei_contig18494:147..1291- (Phaeothamnion wetherbeei SAG_119_79)back to top |