mRNA_P-wetherbeei_contig18490.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18490.1.1
Unique NamemRNA_P-wetherbeei_contig18490.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18490.1.1 vs. uniprot
Match: A0A7C4TUB7_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TUB7_9HYPH)

HSP 1 Score: 475 bits (1223), Expect = 1.910e-160
Identity = 243/369 (65.85%), Postives = 286/369 (77.51%), Query Frame = 1
Query:    1 LVPGPDMLTKNLKFTYSMVWSVALANVLGAGMCYMFSSQFAKLATLRYTLIMPSVLGIIYIGAFEGSRNWGDLYSLLIFGVMGWLMKYYRWPRPPFILGFVLGDILERYLFISIERYGMDWLIPKWTPQMTPYSFFGLFHFPLPF-DSRPFVILLFAAAVLSLLRPVITQLRARGGLSTI---YGAPKLAWGDLFNIAIIAALSYMLWESMGWNFKARIVPNIVGSIAMAFAVMALFHNIFARGKEAAAATFSADSIKQDISGEIHMDLASDTDHIPTRLLVIRTIVFFGWMVAFMISMALIGLIPTVPLFVIAFMRIEGPEPWKLVLPYAAFMTLFIYVMFDQMLTIPWPPTILGQIFPALKGLIPSV 1095
            LVPGPDMLTK+L FTYSMVWSVALAN+LGAGMCY+FS QFAKLATLRYTLI+PSVLGIIYIGAFEGSRNWGDLY+LL+FGV+GW MK  +WPRPPFILGFVLGDILERYLFISIERYG DWLIP+   ++  +   G     LP   +R  V++LF  A+LSLLRPVI   RA GGL  +   YG P+L   +LF   IIA  + M++E+  WNFKARIVP IVG+I + FA  AL HN+F R    A    +A  +       IHMD+AS+T+HIP R +V+R  +FFGW+VAFM+SMA IGLIPTVPLFVIAFMRIEG E W+LVLP A  +TLFIYVMFDQ+LTIPWPPT+LG +FP +KGLIPS+
Sbjct:  346 LVPGPDMLTKHLNFTYSMVWSVALANILGAGMCYLFSGQFAKLATLRYTLILPSVLGIIYIGAFEGSRNWGDLYALLLFGVLGWTMKQMKWPRPPFILGFVLGDILERYLFISIERYGTDWLIPR--IELGTFEILGQ-SMTLPIVHARWAVLILFVMAILSLLRPVIQTFRAHGGLGGVLRMYGPPRLGVAELFAFVIIAWFAIMVYEASFWNFKARIVPTIVGTIGIGFASAALLHNMFTR--PIAKGVAAAGQVLPGSGQSIHMDIASETEHIPPRTIVLRATIFFGWLVAFMLSMATIGLIPTVPLFVIAFMRIEGKESWRLVLPQAIVLTLFIYVMFDQLLTIPWPPTLLGDLFPGIKGLIPSL 709          
BLAST of mRNA_P-wetherbeei_contig18490.1.1 vs. uniprot
Match: A0A1H4VW00_9HYPH (TctA family transporter n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1H4VW00_9HYPH)

HSP 1 Score: 419 bits (1077), Expect = 1.040e-138
Identity = 207/369 (56.10%), Postives = 269/369 (72.90%), Query Frame = 1
Query:    1 LVPGPDMLTKNLKFTYSMVWSVALANVLGAGMCYMFSSQFAKLATLRYTLIMPSVLGIIYIGAFEGSRNWGDLYSLLIFGVMGWLMKYYRWPRPPFILGFVLGDILERYLFISIERYGMDWLIPKWTPQMTPYSFFGLFHFPLPFDSRPFVILLFAAAVLSLLRPVITQLRARGGLSTIYGA----PKLAWGDLFNIAIIAALSYMLWESMGWNFKARIVPNIVGSIAMAFAVMALFHNIFARGKEAAAATFSADSIKQDISGEIHMDLASDTDHIPTRLLVIRTIVFFGWMVAFMISMALIGLIPTVPLFVIAFMRIEGPEPWKLVLPYAAFMTLFIYVMFDQMLTIPWPPTILGQIFPALKGLIPSV 1095
            LVPGPDML+K+L  TY+MVWSVALAN+LGAG+CY+FS QFA+LATLRYTLIMP+VLGIIYIGAF+G+RNWGDL++LLIFG++GW MK  ++PRPP +LG VLG+++ERYLFISI+RYG+ W                         SRP VI+LFA A+  LLRP+   ++  GG+  +       P+L    LF++ ++  + + + E+  WNF A+IVP IVG +A +F + +L +  F R    A  T  A +++QD+  +IHMDL SDTDH+PTR L IR  +FFGW++AFM SM++IGLIPTVPLFVI +MR+EGPEPWKLV+P A  +T+FIY +FDQ+LTIPWPPT LG   PALKGLIPSV
Sbjct:  346 LVPGPDMLSKHLNVTYAMVWSVALANILGAGLCYLFSEQFARLATLRYTLIMPTVLGIIYIGAFQGARNWGDLWTLLIFGILGWTMKQMKFPRPPLVLGIVLGEVVERYLFISIQRYGVQWF------------------------SRPIVIVLFAMALFGLLRPLRQDIKGHGGIKGMLSGFGVTPQLHPKQLFHVFLLCVIGWAMIEASSWNFSAKIVPMIVGGMAFSFCLFSLLNEAF-RQPGKAVQTGLASAVQQDLQQKIHMDLESDTDHVPTRTLAIRGTIFFGWLLAFMASMSVIGLIPTVPLFVILYMRLEGPEPWKLVIPQAIGLTVFIYFLFDQLLTIPWPPTYLGTWIPALKGLIPSV 689          
BLAST of mRNA_P-wetherbeei_contig18490.1.1 vs. uniprot
Match: A0A858X449_9HYPH (Tripartite tricarboxylate transporter permease n=1 Tax=Starkeya sp. ORNL1 TaxID=2709380 RepID=A0A858X449_9HYPH)

HSP 1 Score: 404 bits (1038), Expect = 6.350e-133
Identity = 202/369 (54.74%), Postives = 264/369 (71.54%), Query Frame = 1
Query:    1 LVPGPDMLTKNLKFTYSMVWSVALANVLGAGMCYMFSSQFAKLATLRYTLIMPSVLGIIYIGAFEGSRNWGDLYSLLIFGVMGWLMKYYRWPRPPFILGFVLGDILERYLFISIERYGMDWLIPKWTPQMTPYSFFGLFHFPLPFDSRPFVILLFAAAVLSLLRPVITQLRARGGL----STIYGAPKLAWGDLFNIAIIAALSYMLWESMGWNFKARIVPNIVGSIAMAFAVMALFHNIFARGKEAAAATFSADSIKQDISGEIHMDLASDTDHIPTRLLVIRTIVFFGWMVAFMISMALIGLIPTVPLFVIAFMRIEGPEPWKLVLPYAAFMTLFIYVMFDQMLTIPWPPTILGQIFPALKGLIPSV 1095
            L+PGPDMLTKNL  TYSMVWS+ALANVLGAG+CY FS QFA+LATLRYTLI+PSVLGIIYIGAFEGSR+WGDL++LL+ GV+GW MK  +WPR P ILGFVLGD +ERYLFIS+ERYG+DW                         +RP VIL+F  A+  L+RP++  +RA GG+    S I   P+    D+F + +I  ++ ML +++GW F A+IVP +VG +A+ FAV++L + +      A     + +  ++++   IHMDL SDT H+PTR +++R  +FFGW++AFM SMA+IGLIPTVPLFVIAFMR E  EPW+LVLP A  +TLFIY++FD+ + IPWP T+LG  FPAL+  IPS+
Sbjct:  342 LIPGPDMLTKNLTLTYSMVWSIALANVLGAGICYAFSGQFARLATLRYTLILPSVLGIIYIGAFEGSRSWGDLFALLLLGVLGWTMKQLKWPRAPMILGFVLGDTIERYLFISVERYGVDWF------------------------ARPLVILMFTLAIYGLMRPLLQDIRAIGGVRSLASRIAPRPRFRPADIFTVVLIVVITVMLVQAVGWKFNAKIVPMVVGGLALFFAVLSLANRVLLLPMPAHIG--AGEEARKEVEERIHMDLESDTGHLPTRTILLRACIFFGWLLAFMGSMAVIGLIPTVPLFVIAFMRAEAREPWRLVLPQAIILTLFIYLLFDRTIHIPWPQTLLGTWFPALE-FIPSL 683          
BLAST of mRNA_P-wetherbeei_contig18490.1.1 vs. uniprot
Match: A0A6L5FFZ4_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FFZ4_9HYPH)

HSP 1 Score: 401 bits (1031), Expect = 7.780e-132
Identity = 202/368 (54.89%), Postives = 265/368 (72.01%), Query Frame = 1
Query:    1 LVPGPDMLTKNLKFTYSMVWSVALANVLGAGMCYMFSSQFAKLATLRYTLIMPSVLGIIYIGAFEGSRNWGDLYSLLIFGVMGWLMKYYRWPRPPFILGFVLGDILERYLFISIERYGMDWLIPKWTPQMTPYSFFGLFHFPLPFDSRPFVILLFAAAVLSLLRPVITQLRARGGLS---TIYGAPKLAWGDLFNIAIIAALSYMLWESMGWNFKARIVPNIVGSIAMAFAVMALFHNIFARGKEAAAATFSADSIKQDISGEIHMDLASDTDHIPTRLLVIRTIVFFGWMVAFMISMALIGLIPTVPLFVIAFMRIEGPEPWKLVLPYAAFMTLFIYVMFDQMLTIPWPPTILGQIFPALKGLIPSV 1095
            LVPGPDML KNL  TY+MVWS+ALAN+LGAG+CY+FS QFAK+ATLRYTLI+P VLGIIYIGAFEGSR+WGDL+SLL FG++GW MK  +WPRPP +LGFVLGDI+ERY+FIS+ERYG+ W+                        +RP V++LFA A + L+RP +  +R  GGL    T +GAP+    DLF + +I  L  M+ E+  WNF A++VP  VGS+A+AF  ++L + +F R    A+    +++ K ++  +IHMDL S T H+P R+++ R  +FFGW++AFM SMA IGLIPTVPLFV+A+MR E  EPW++VLP A  +TLFIY++FDQ+LTIPWP T+LG   P LK +IPSV
Sbjct:  346 LVPGPDMLGKNLSITYAMVWSIALANILGAGLCYLFSGQFAKIATLRYTLILPCVLGIIYIGAFEGSRSWGDLFSLLFFGLLGWTMKQMKWPRPPLVLGFVLGDIIERYMFISVERYGLAWM------------------------ARPVVVVLFALAFVGLMRPFLQDVRLHGGLKRMLTGFGAPRFQPSDLFAVFMILLLGAMVIEASEWNFGAKVVPLTVGSLALAFVTISLLNQVF-RAPVGASDGIGSEA-KAEVQQKIHMDLDSGTQHLPVRVILQRGGIFFGWLLAFMASMATIGLIPTVPLFVVAYMRSEAREPWRIVLPQAIGLTLFIYIVFDQLLTIPWPQTLLGTFVPTLK-VIPSV 686          
BLAST of mRNA_P-wetherbeei_contig18490.1.1 vs. uniprot
Match: A0A6L5FDM8_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FDM8_9HYPH)

HSP 1 Score: 390 bits (1002), Expect = 1.800e-127
Identity = 191/368 (51.90%), Postives = 263/368 (71.47%), Query Frame = 1
Query:    1 LVPGPDMLTKNLKFTYSMVWSVALANVLGAGMCYMFSSQFAKLATLRYTLIMPSVLGIIYIGAFEGSRNWGDLYSLLIFGVMGWLMKYYRWPRPPFILGFVLGDILERYLFISIERYGMDWLIPKWTPQMTPYSFFGLFHFPLPFDSRPFVILLFAAAVLSLLRPVITQLRARGGLSTI---YGAPKLAWGDLFNIAIIAALSYMLWESMGWNFKARIVPNIVGSIAMAFAVMALFHNIFARGKEAAAATFSADSIKQDISGEIHMDLASDTDHIPTRLLVIRTIVFFGWMVAFMISMALIGLIPTVPLFVIAFMRIEGPEPWKLVLPYAAFMTLFIYVMFDQMLTIPWPPTILGQIFPALKGLIPSV 1095
            LVPGPDML KNL  TY+MVWSVA+AN+LGAG+C++FS QFAK+ATLRY+LI+P +L I+YIGAF+G+R WGDLY+LL+FG++GW MK  +WPRPP ILG VLGDI+ERY+FIS+ERYG+ WL                        +RP VI+L   A+L + RP++  +R  GGL  +   +G PK +  DLF   +I  ++ ML ++  W F A+IVP  VG +A+ FA ++L + IF   +E++ +  + D  K  +  +IHMD+ +DT  +PTR+++ R  +FFGW++AFM SMA+IGLIPT+PLFVI +MR+E  E W LV+P A  +TLF+Y++FDQ+LTIPWPPT+LG + PALK +IPSV
Sbjct:  347 LVPGPDMLGKNLNITYAMVWSVAIANILGAGLCFLFSGQFAKIATLRYSLILPCILAILYIGAFQGTRAWGDLYALLLFGLLGWTMKQLKWPRPPLILGLVLGDIIERYMFISVERYGLSWL------------------------TRPVVIILLILAILGVARPLLQDIRIHGGLRAMLSGFGRPKFSLPDLFPAFLIVLIAGMLIQASEWGFGAQIVPLTVGIMALCFATISLLNQIFRATEESSES--ADDGAKAKVQQKIHMDIVADTAEVPTRVILQRAAIFFGWLLAFMASMAVIGLIPTIPLFVIGYMRLENRERWTLVIPQAIGLTLFVYIVFDQLLTIPWPPTLLGDLIPALK-VIPSV 687          
BLAST of mRNA_P-wetherbeei_contig18490.1.1 vs. uniprot
Match: A0A537SU62_9PROT (Tripartite tricarboxylate transporter permease n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SU62_9PROT)

HSP 1 Score: 389 bits (999), Expect = 6.180e-127
Identity = 198/368 (53.80%), Postives = 257/368 (69.84%), Query Frame = 1
Query:    1 LVPGPDMLTKNLKFTYSMVWSVALANVLGAGMCYMFSSQFAKLATLRYTLIMPSVLGIIYIGAFEGSRNWGDLYSLLIFGVMGWLMKYYRWPRPPFILGFVLGDILERYLFISIERYGMDWLIPKWTPQMTPYSFFGLFHFPLPFDSRPFVILLFAAAVLSLLRPVITQLRARGGLS---TIYGAPKLAWGDLFNIAIIAALSYMLWESMGWNFKARIVPNIVGSIAMAFAVMALFHNIFARGKEAAAATFSADSIKQDISGEIHMDLASDTDHIPTRLLVIRTIVFFGWMVAFMISMALIGLIPTVPLFVIAFMRIEGPEPWKLVLPYAAFMTLFIYVMFDQMLTIPWPPTILGQIFPALKGLIPSV 1095
            LVPGPDMLTKNL  TY+MVWSVALAN+LGAG+CY FS QFAKLATLRYTLI+P+VLGIIYIGAFE +R WGDL++LL FG++GW+MK ++WPRPP ILG VLGD +ERYLFISIERYG+ W++                        RP V+LLFA A+L L+RP++  +R++GGL    T +  P      LF + +IA +   +  S+ W+F A+IVP +VG++A+  AV++LF N   R   AAAA   A+  + ++  +IHMDL SDT H+P R +V+R  +FFG+++ FM  MA IGLIPTV LFV+ FMR E  E W LV+PYA  + LFI+  FD  + +PWPPT++GQ FP LK  IPSV
Sbjct:  353 LVPGPDMLTKNLSITYAMVWSVALANILGAGLCYAFSPQFAKLATLRYTLILPAVLGIIYIGAFEATRQWGDLFTLLFFGLVGWIMKQFKWPRPPLILGVVLGDTIERYLFISIERYGLSWML------------------------RPIVVLLFALAILGLIRPLLQDIRSQGGLGRMLTSFQRPTFHPSQLFTMFMIALIGAAVVASLQWDFSAKIVPLVVGTVALCAAVLSLF-NEMCRKPAAAAAEGPAEHAEHEVGEKIHMDLVSDTAHLPVREIVMRAGLFFGYLIGFMAVMATIGLIPTVGLFVVFFMRYEAKERWSLVIPYAVVLVLFIWFAFDYFMAVPWPPTLIGQWFPLLKA-IPSV 694          
BLAST of mRNA_P-wetherbeei_contig18490.1.1 vs. uniprot
Match: A0A1F4AKT1_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4AKT1_9PROT)

HSP 1 Score: 386 bits (992), Expect = 6.200e-126
Identity = 194/368 (52.72%), Postives = 259/368 (70.38%), Query Frame = 1
Query:    1 LVPGPDMLTKNLKFTYSMVWSVALANVLGAGMCYMFSSQFAKLATLRYTLIMPSVLGIIYIGAFEGSRNWGDLYSLLIFGVMGWLMKYYRWPRPPFILGFVLGDILERYLFISIERYGMDWLIPKWTPQMTPYSFFGLFHFPLPFDSRPFVILLFAAAVLSLLRPVITQLRARGGLS---TIYGAPKLAWGDLFNIAIIAALSYMLWESMGWNFKARIVPNIVGSIAMAFAVMALFHNIFARGKEAAAATFSADSIKQDISGEIHMDLASDTDHIPTRLLVIRTIVFFGWMVAFMISMALIGLIPTVPLFVIAFMRIEGPEPWKLVLPYAAFMTLFIYVMFDQMLTIPWPPTILGQIFPALKGLIPSV 1095
            LVPGPDML KNL  TY+MVWSVA+ANVLGAG+CY+FSSQFAK+ATLRYTLI+PSVLGII+IGAF+GSR WGDL+ LL+FGV+GW MK  +WPRPP ILG VLG+ +ERYLFISIE +G  WL                        +RP VI++ A A L ++RP +  +R  GGL    T +GAP      LF++ ++  L  M+W+++ WNF A+IVP IVG +  A   ++LF++   R  EA A      +  + +  +IHMD+ S T H+P R++V R  +FFGW++AFM SM + GLIPTVP+FV+A MRIEG EPW+LVL  AA +T+F++ +FD++L++PWPPT++G   PALKG+IPS+
Sbjct:  348 LVPGPDMLGKNLNVTYAMVWSVAIANVLGAGLCYLFSSQFAKVATLRYTLILPSVLGIIFIGAFQGSRQWGDLWVLLLFGVLGWTMKQLKWPRPPLILGVVLGEAVERYLFISIEGFGAGWL------------------------TRPVVIVVLAIAALGVIRPFLQDVRIHGGLKKMLTGFGAPNFRLSHLFHLFLLLLLGTMVWDALAWNFSAKIVPLIVGGVGFACCAISLFNDA-CRAPEAQADIGLEAAALRRVEKKIHMDMDSGTAHLPVRVVVQRAALFFGWLLAFMGSMWVFGLIPTVPIFVVAIMRIEGREPWRLVLAQAAGLTVFVWGLFDRLLSMPWPPTLIGAWIPALKGIIPSI 690          
BLAST of mRNA_P-wetherbeei_contig18490.1.1 vs. uniprot
Match: A0A1F3ZNU5_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17 TaxID=1797484 RepID=A0A1F3ZNU5_9PROT)

HSP 1 Score: 380 bits (976), Expect = 2.340e-123
Identity = 192/378 (50.79%), Postives = 262/378 (69.31%), Query Frame = 1
Query:    1 LVPGPDMLTKNLKFTYSMVWSVALANVLGAGMCYMFSSQFAKLATLRYTLIMPSVLGIIYIGAFEGSRNWGDLYSLLIFGVMGWLMKYYRWPRPPFILGFVLGDILERYLFISIERYGMDWLIPKWTPQMTPYSFFGLFHFPLPFDSRPFVILLFAAAVLSLLRPVITQLRARGGLSTI---YGAPKLAWGDLFNIAIIAALSYMLWESMGWNFKARIVPNIVGSIAMAFAVMALFHNIF-------ARGKEAAAATFSADSIKQDI---SGEIHMDLASDTDHIPTRLLVIRTIVFFGWMVAFMISMALIGLIPTVPLFVIAFMRIEGPEPWKLVLPYAAFMTLFIYVMFDQMLTIPWPPTILGQIFPALKGLIPSV 1095
            LVPGPDML K+L  TYSMVWSVALAN+LGAG+CY FS QFA++A LRYTLI P+VLGIIYIGAFE SRNWGDLY+LL FG++GW+MK ++WPRPP ILG VLGD++ERY+FIS+ERYG+DW+                        +RP V++LFA A++ L+RP++   R +GGL  I   +G  +  WG LF +  +A  S M+  S GW F A+IVP +VG +A+   V++L +  F       A G E +AA  +A    + +   +G+IHMD+ SDT H+P   ++ R  +FFG+++AFM S  L+GLIPT+ +FV+AFMRIE  E W LVL YA FM +F+ ++FD+++ +PWPP++LG+  PALK +IPS+
Sbjct:  353 LVPGPDMLNKHLDITYSMVWSVALANLLGAGLCYAFSPQFARVALLRYTLICPAVLGIIYIGAFESSRNWGDLYTLLFFGLLGWIMKQFKWPRPPLILGLVLGDLIERYMFISVERYGIDWM------------------------TRPLVVILFALAIIGLVRPLLEDYRGQGGLRAILGSFGRARFEWGQLFTLFYLAVFSAMVIMSRGWQFNAKIVPLVVGGVALIAVVLSLLNQTFRKPAAAPASGTEISAADNAALLTGEKLPVNTGKIHMDIESDTAHLPLSTIIARAAMFFGYLLAFMGSTYLVGLIPTLFIFVVAFMRIEARERWTLVLSYAGFMVVFVTLVFDRIMKVPWPPSLLGEWMPALK-VIPSL 705          
BLAST of mRNA_P-wetherbeei_contig18490.1.1 vs. uniprot
Match: UPI001A941459 (tripartite tricarboxylate transporter permease n=1 Tax=Jiella sonneratiae TaxID=2816856 RepID=UPI001A941459)

HSP 1 Score: 379 bits (974), Expect = 2.850e-123
Identity = 195/368 (52.99%), Postives = 250/368 (67.93%), Query Frame = 1
Query:    1 LVPGPDMLTKNLKFTYSMVWSVALANVLGAGMCYMFSSQFAKLATLRYTLIMPSVLGIIYIGAFEGSRNWGDLYSLLIFGVMGWLMKYYRWPRPPFILGFVLGDILERYLFISIERYGMDWLIPKWTPQMTPYSFFGLFHFPLPFDSRPFVILLFAAAVLSLLRPVITQLRARGGLSTI---YGAPKLAWGDLFNIAIIAALSYMLWESMGWNFKARIVPNIVGSIAMAFAVMALFHNIFARGKEAAAATFSADSIKQDISGEIHMDLASDTDHIPTRLLVIRTIVFFGWMVAFMISMALIGLIPTVPLFVIAFMRIEGPEPWKLVLPYAAFMTLFIYVMFDQMLTIPWPPTILGQIFPALKGLIPSV 1095
            LVPGPDML+ NL  TYSMVWS+A+AN+LGAG+CY+ S QFAKLA LRYTLI+PSVL II+IGAF+GS+ WGDLY+++IFG++GW MK  +WPRPP ILG VLG  +ERYLFISIERYG++W                         SRP V++LF  A L LLRP+I   RA G    +   YG P     DLFN+  IA L  ML+E+ GWNFKA+I+P +VG  A+ FAV++L + +  R  E       AD  K ++S +IHMDLASDT H+  + +  R   FFGW+  F++SM++IGL+PTVPLF+  +MR E  EPW++VLP A  MT+FI  +F+  L + WPPT LG  FPALK +IPSV
Sbjct:  346 LVPGPDMLSVNLSVTYSMVWSIAIANILGAGICYLLSGQFAKLAQLRYTLILPSVLSIIFIGAFQGSQQWGDLYTMMIFGLVGWTMKMLKWPRPPLILGLVLGASVERYLFISIERYGIEWF------------------------SRPIVLVLFGFAALGLLRPLIRDARAHGSWRNMLADYGRPAFRATDLFNLLFIAVLVLMLYEAAGWNFKAKIIPMVVGISALIFAVLSLVNQV-CRRLERERRHGLADDAKANVSRKIHMDLASDTAHLTRKQVFTRAASFFGWLTGFLVSMSIIGLVPTVPLFIAGYMRTEAREPWRIVLPMAIGMTVFIAALFNYFLPMAWPPTFLGHWFPALK-VIPSV 687          
BLAST of mRNA_P-wetherbeei_contig18490.1.1 vs. uniprot
Match: A0A1H4JLJ6_9HYPH (TctA family transporter n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1H4JLJ6_9HYPH)

HSP 1 Score: 379 bits (972), Expect = 6.700e-123
Identity = 186/371 (50.13%), Postives = 256/371 (69.00%), Query Frame = 1
Query:    1 LVPGPDMLTKNLKFTYSMVWSVALANVLGAGMCYMFSSQFAKLATLRYTLIMPSVLGIIYIGAFEGSRNWGDLYSLLIFGVMGWLMKYYRWPRPPFILGFVLGDILERYLFISIERYGMDWLIPKWTPQMTPYSFFGLFHFPLPFDSRPFVILLFAAAVLSLLRPVITQLRARGGLSTIYGA---PKLAWGDLFNIAIIAALSYMLWESMGWNFKARIVPNIVGSIAMAFAVMALFHNIFARGKEAAAATFSADS---IKQDISGEIHMDLASDTDHIPTRLLVIRTIVFFGWMVAFMISMALIGLIPTVPLFVIAFMRIEGPEPWKLVLPYAAFMTLFIYVMFDQMLTIPWPPTILGQIFPALKGLIPSV 1095
            LVPGP+MLTKNL  TYSMVWS+A+AN+LG+G+C++FS QFAK+ATLRYTLI+P VL  +YIGAFEG R+WGDL SLL FGV+ W  K+++WPRPP +LGF+LG ILERY+FISI+RYG  W++                        RP V++LF  + +S+LRP +  +R  GGL  + G    P+L    +F I ++   S M+ E++ WNF A+I+P IVG+ A+ F  ++L + +F R +         ++      D + ++HMD+AS+  H+P R +++R  +FFGWMV F+ISMALIGLIPTVP+F+I+FMR+EG E WKL    AAFMTLFIY +FDQ+L IPWP ++LG IFP L+  +PS+
Sbjct:  347 LVPGPEMLTKNLGLTYSMVWSIAIANILGSGLCFLFSGQFAKMATLRYTLILPVVLCFVYIGAFEGHRSWGDLISLLCFGVIAWGAKHFKWPRPPLVLGFILGSILERYMFISIQRYGTSWML------------------------RPLVVILFLMSAISILRPFLQDVRRHGGLRGMIGELSPPRLRPSHVFPIGLLCLFSVMMLEAVQWNFSAKIIPMIVGTGAILFCSLSLLNEVFKRPEPEPKPITPGETDLAAVADPNAKVHMDIASNITHLPPRTILLRGAIFFGWMVGFLISMALIGLIPTVPIFIISFMRLEGRERWKLTFIMAAFMTLFIYGLFDQLLAIPWPGSLLGDIFPWLRDNVPSM 693          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18490.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TUB7_9HYPH1.910e-16065.85Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A1H4VW00_9HYPH1.040e-13856.10TctA family transporter n=3 Tax=Hyphomicrobiales T... [more]
A0A858X449_9HYPH6.350e-13354.74Tripartite tricarboxylate transporter permease n=1... [more]
A0A6L5FFZ4_9HYPH7.780e-13254.89Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A6L5FDM8_9HYPH1.800e-12751.90Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A537SU62_9PROT6.180e-12753.80Tripartite tricarboxylate transporter permease n=6... [more]
A0A1F4AKT1_9PROT6.200e-12652.72Uncharacterized protein n=2 Tax=unclassified Betap... [more]
A0A1F3ZNU5_9PROT2.340e-12350.79Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
UPI001A9414592.850e-12352.99tripartite tricarboxylate transporter permease n=1... [more]
A0A1H4JLJ6_9HYPH6.700e-12350.13TctA family transporter n=2 Tax=Hyphomicrobiales T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18490contigP-wetherbeei_contig18490:252..1349 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1144310.PMI07_005586
PFAMsTctA,TctB
Model size1098
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.89e-111
EggNOG OGsCOG3333@1|root,COG3333@2|Bacteria,1MUKR@1224|Proteobacteria,2TVI3@28211|Alphaproteobacteria,4BCQJ@82115|Rhizobiaceae
DescriptionTripartite tricarboxylate transporter TctA family
Cds size1080
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186147.7960708-CDS-P-wetherbeei_contig18490:251..13311683186147.7960708-CDS-P-wetherbeei_contig18490:251..1331Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18490 252..1331 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186147.8070834-UTR-P-wetherbeei_contig18490:1331..13491683186147.8070834-UTR-P-wetherbeei_contig18490:1331..1349Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig18490 1332..1349 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18490.1.1prot_P-wetherbeei_contig18490.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18490 252..1331 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18490.1.1

>prot_P-wetherbeei_contig18490.1.1 ID=prot_P-wetherbeei_contig18490.1.1|Name=mRNA_P-wetherbeei_contig18490.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=360bp
MLTKNLKFTYSMVWSVALANVLGAGMCYMFSSQFAKLATLRYTLIMPSVL
GIIYIGAFEGSRNWGDLYSLLIFGVMGWLMKYYRWPRPPFILGFVLGDIL
ERYLFISIERYGMDWLIPKWTPQMTPYSFFGLFHFPLPFDSRPFVILLFA
AAVLSLLRPVITQLRARGGLSTIYGAPKLAWGDLFNIAIIAALSYMLWES
MGWNFKARIVPNIVGSIAMAFAVMALFHNIFARGKEAAAATFSADSIKQD
ISGEIHMDLASDTDHIPTRLLVIRTIVFFGWMVAFMISMALIGLIPTVPL
FVIAFMRIEGPEPWKLVLPYAAFMTLFIYVMFDQMLTIPWPPTILGQIFP
ALKGLIPSV*
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mRNA from alignment at P-wetherbeei_contig18490:252..1349-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18490.1.1 ID=mRNA_P-wetherbeei_contig18490.1.1|Name=mRNA_P-wetherbeei_contig18490.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1098bp|location=Sequence derived from alignment at P-wetherbeei_contig18490:252..1349- (Phaeothamnion wetherbeei SAG_119_79)
CTCGTGCCGGGACCCGACATGCTGACCAAGAACCTCAAGTTCACGTACTC GATGGTCTGGTCGGTTGCTCTCGCCAACGTCCTTGGCGCCGGCATGTGCT ATATGTTCTCGAGCCAGTTCGCCAAGCTGGCGACGTTGCGCTACACGCTG ATCATGCCGTCGGTTCTCGGCATCATTTACATCGGCGCCTTCGAAGGCTC GCGCAACTGGGGCGACCTCTACTCCCTGCTCATCTTCGGTGTGATGGGCT GGCTGATGAAGTACTACCGCTGGCCGCGCCCCCCGTTCATTCTGGGCTTC GTGCTGGGCGACATTCTGGAGCGTTACCTTTTCATCTCGATCGAACGCTA TGGGATGGACTGGCTGATCCCGAAATGGACGCCGCAGATGACGCCTTACA GCTTCTTCGGCTTGTTCCACTTCCCGCTGCCGTTCGATTCCAGGCCTTTC GTGATCCTCCTGTTCGCTGCGGCGGTTCTCAGCCTGCTGCGCCCGGTAAT CACTCAACTGCGCGCGCGCGGCGGTTTGTCTACGATCTACGGTGCGCCAA AGCTCGCATGGGGTGACCTCTTCAACATCGCGATCATCGCCGCGCTGTCT TACATGCTCTGGGAATCGATGGGCTGGAACTTCAAGGCCCGCATCGTACC CAACATCGTCGGCAGCATCGCGATGGCTTTCGCCGTGATGGCACTGTTTC ACAACATCTTTGCCCGCGGCAAGGAAGCGGCCGCAGCAACCTTCAGCGCC GACTCGATCAAGCAGGATATCTCCGGCGAGATCCACATGGACCTAGCCTC CGATACCGACCACATACCAACGCGGCTCCTGGTCATCCGGACGATCGTGT TCTTCGGCTGGATGGTCGCCTTCATGATCTCGATGGCGCTGATCGGCCTG ATCCCGACCGTGCCGCTGTTCGTTATCGCATTCATGCGGATCGAGGGTCC TGAGCCGTGGAAGCTCGTGCTCCCCTACGCCGCGTTCATGACGTTGTTCA TTTACGTCATGTTCGATCAAATGCTGACGATCCCTTGGCCTCCGACCATT CTCGGCCAGATCTTCCCGGCACTGAAGGGCCTGATCCCCTCGGTCTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18490:252..1349-

>mRNA_P-wetherbeei_contig18490.1.1 ID=mRNA_P-wetherbeei_contig18490.1.1|Name=mRNA_P-wetherbeei_contig18490.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1080bp|location=Sequence derived from alignment at P-wetherbeei_contig18490:252..1349- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGACCAAGAACCTCAAGTTCACGTACTCGATGGTCTGGTCGGTTGC
TCTCGCCAACGTCCTTGGCGCCGGCATGTGCTATATGTTCTCGAGCCAGT
TCGCCAAGCTGGCGACGTTGCGCTACACGCTGATCATGCCGTCGGTTCTC
GGCATCATTTACATCGGCGCCTTCGAAGGCTCGCGCAACTGGGGCGACCT
CTACTCCCTGCTCATCTTCGGTGTGATGGGCTGGCTGATGAAGTACTACC
GCTGGCCGCGCCCCCCGTTCATTCTGGGCTTCGTGCTGGGCGACATTCTG
GAGCGTTACCTTTTCATCTCGATCGAACGCTATGGGATGGACTGGCTGAT
CCCGAAATGGACGCCGCAGATGACGCCTTACAGCTTCTTCGGCTTGTTCC
ACTTCCCGCTGCCGTTCGATTCCAGGCCTTTCGTGATCCTCCTGTTCGCT
GCGGCGGTTCTCAGCCTGCTGCGCCCGGTAATCACTCAACTGCGCGCGCG
CGGCGGTTTGTCTACGATCTACGGTGCGCCAAAGCTCGCATGGGGTGACC
TCTTCAACATCGCGATCATCGCCGCGCTGTCTTACATGCTCTGGGAATCG
ATGGGCTGGAACTTCAAGGCCCGCATCGTACCCAACATCGTCGGCAGCAT
CGCGATGGCTTTCGCCGTGATGGCACTGTTTCACAACATCTTTGCCCGCG
GCAAGGAAGCGGCCGCAGCAACCTTCAGCGCCGACTCGATCAAGCAGGAT
ATCTCCGGCGAGATCCACATGGACCTAGCCTCCGATACCGACCACATACC
AACGCGGCTCCTGGTCATCCGGACGATCGTGTTCTTCGGCTGGATGGTCG
CCTTCATGATCTCGATGGCGCTGATCGGCCTGATCCCGACCGTGCCGCTG
TTCGTTATCGCATTCATGCGGATCGAGGGTCCTGAGCCGTGGAAGCTCGT
GCTCCCCTACGCCGCGTTCATGACGTTGTTCATTTACGTCATGTTCGATC
AAATGCTGACGATCCCTTGGCCTCCGACCATTCTCGGCCAGATCTTCCCG
GCACTGAAGGGCCTGATCCCCTCGGTCTAA
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