mRNA_P-wetherbeei_contig18453.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18453.1.1 vs. uniprot
Match: D7FVQ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVQ1_ECTSI) HSP 1 Score: 129 bits (325), Expect = 1.670e-30 Identity = 70/163 (42.94%), Postives = 97/163 (59.51%), Query Frame = 1
Query: 238 VLRSVWEGILFEYLRAAGHPLRGVGLDPRHFVLRHWRRSLLEPGGATVGLKLAVARRIRPRGPFASEDADVAAVRAAVGRREVAAKAAERTLRDGTDYRNVLEYLAAAGNLHAEAVRGVDYLSAEVETARARLDHSAESGLALQAQLLEAEDRLEAAAGALVH 726
VL+ WEG+LFEYLR G PLR DPRHFV+R+WRRS+L+P + R ++ R E+ D+ +RA + RE K AE R+ DYR VL+Y +A+ +LH V V+YL+ EVE RA +DHS+ES ++ Q +E E + + G LVH
Sbjct: 100 VLKFCWEGLLFEYLRTVGCPLRDREHDPRHFVMRYWRRSMLDPSVRPGFVPFYAKREVKKRNSLMQEERDIRNIRAGLALREDVVKDAENKTREQHDYRFVLQYFSASRDLHRTLVANVNYLANEVEQLRANMDHSSESISIMEQQFVELETKYDQVVGGLVH 262
BLAST of mRNA_P-wetherbeei_contig18453.1.1 vs. uniprot
Match: F0YAF5_AURAN (WW domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAF5_AURAN) HSP 1 Score: 100 bits (249), Expect = 2.560e-20 Identity = 60/135 (44.44%), Postives = 76/135 (56.30%), Query Frame = 1
Query: 241 LRSVWEGILFEYLRAAGHPLRGVGLDPRHFVLRHWR-RSLLEPGGATVGLKLAVARRIRPRGPFASEDADVAAVRAAVGRREVAAKAAERTLRDGTDYRNVLEYLAAAGNLHAEAVRGVDYLSAEVETARARLDH 642
L +W+GILFEYLRA G PLR +DPR F L+ WR R+ GG V V R IR RG A AD+ + V +E+A K E +R +DYRNV+ +LA +LH DYL E+E AR R+DH
Sbjct: 107 LAMMWDGILFEYLRAEGMPLRSARIDPRVFTLQLWRKRAAFNSGGNVVFRPHYVPRHIRRRGKGAPRAADLEGILRGVEAKELAVKHVENKIRKESDYRNVIRFLADTTSLHEFERDARDYLMHELEAARDRIDH 241
BLAST of mRNA_P-wetherbeei_contig18453.1.1 vs. uniprot
Match: A0A836CGG2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGG2_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 9.190e-19 Identity = 54/117 (46.15%), Postives = 71/117 (60.68%), Query Frame = 1
Query: 235 KVLRSVWEGILFEYLRAAGHPLRGVGLDPRHFVLRHWRRSLLEPGGATVGLKLAVARRIRPRGPFA-SEDADVAAVRAAVGRREVAAKAAERTLRDGTDYRNVLEYLAAAGNLHAEA 582
+VLR VWEG+LFEYLR+ G P+ DPR +VL++WRRS +P GA + + RR+ R ED DV VRA + EVA K AE +R DYR++L Y +A +LH EA
Sbjct: 102 EVLRFVWEGLLFEYLRSVGCPVFTAERDPRIYVLKYWRRSTTDPRGAASFVPYYLERRVYARADGQPEEDPDVGEVRARIMGAEVAVKEAEALVRASRDYRHILTYFSATADLHREA 218
BLAST of mRNA_P-wetherbeei_contig18453.1.1 vs. uniprot
Match: A0A8J2WS82_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WS82_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.040e-18 Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = 1
Query: 241 LRSVWEGILFEYLRAAGHPLRGVGLDPRHFVLRHWRR-SLLEPGGATVGLKLAVARRIRPRGPFASEDADVAAVRAAVGRREVAAKAAERTLRDGTDYRNVLEYLAAAGNLHAEAVRGVDYLSAEVETARARLDHSAESGLALQAQLLEAE 690
L ++W+GIL+EYLRA G PLR +DPR F L+ WRR + GG + V R +R R AD+ + V +E+A K ER +R +DYRNV+ +LA +LH DYL E+E+ R R+DH S QL EAE
Sbjct: 188 LETMWDGILYEYLRAEGQPLRSARVDPRVFTLQMWRRRAAFSQGGQGIFRPHYVPRMVRMRDQKPPRAADLEGLLRGVEAKELALKHIERKVRKESDYRNVIRFLADTTSLHEFERDARDYLMHELESCRDRIDHYQASLEMTGEQLGEAE 338
BLAST of mRNA_P-wetherbeei_contig18453.1.1 vs. uniprot
Match: A0A7S1XJ94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ94_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 7.530e-14 Identity = 55/163 (33.74%), Postives = 80/163 (49.08%), Query Frame = 1
Query: 226 DLRKVLRSVWEGILFEYLRAAGHPLRGVGLDPRHFVLRHWRRSLLEPGGATVGLKLAVARRIR---PRGPFASEDADVAAVRAAVGRREVAAKAAERTLRDGTDYRNVLEYLAAAGNLHAEAVRGVDYLSAEVETARARLDHSAESGLALQAQLLEAEDRLEA 705
+ +VL+ VWEG+LFEYLR+ G PL LDPR FV R+W++ +P + R +R G + +D ++ V V +E+ K E +R DYR++L +L A L DYL +VE R+ H S ++ Q E E RL A
Sbjct: 108 NYHEVLKVVWEGVLFEYLRSVGQPLHSNHLDPRTFVARYWKKRATDPKNRLF-VPYYTGREVRNCHENGDYKDDDLEM--VLDDVETKEITVKKMETIMRKERDYRHILNFLNAVKELRDAEKSHRDYLILQVEKLRSVHGHWISSQKIMEEQTEELEQRLAA 267
BLAST of mRNA_P-wetherbeei_contig18453.1.1 vs. uniprot
Match: A0A7S4DIU4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIU4_HETAK) HSP 1 Score: 58.5 bits (140), Expect = 3.860e-7 Identity = 44/121 (36.36%), Postives = 60/121 (49.59%), Query Frame = 1
Query: 403 RRIRPRGPFASEDADVAAVRAAVGRREVAAKAAERTLRDGTDYRNVLEYLAAAGNLHAEAVRGVDYLSAEVETARARLDHSAESGLALQAQLLEAEDRLEA------AAGALVHGAAADTV 747
R+ R D D+ + + +E+A K AE+ LR DYR VL Y A LH RG+D+++AE E RAR++H ++ QL E E R E A GA GA ADT+
Sbjct: 3 RKFEVRSGRPRHDRDIGKIVEEIAGKEIAVKQAEQCLRRENDYRFVLRYFTAVNELHDAQKRGMDFMTAEAEMLRARMEHCEQNFSVTAEQLEELEYRHEVLKDRFVARGAF-EGALADTL 122 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18453.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18453.1.1 >prot_P-wetherbeei_contig18453.1.1 ID=prot_P-wetherbeei_contig18453.1.1|Name=mRNA_P-wetherbeei_contig18453.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=194bp MEMSPPHFLLSVPDLRKVLRSVWEGILFEYLRAAGHPLRGVGLDPRHFVLback to top mRNA from alignment at P-wetherbeei_contig18453:2..983+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18453.1.1 ID=mRNA_P-wetherbeei_contig18453.1.1|Name=mRNA_P-wetherbeei_contig18453.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=982bp|location=Sequence derived from alignment at P-wetherbeei_contig18453:2..983+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18453:2..983+ >mRNA_P-wetherbeei_contig18453.1.1 ID=mRNA_P-wetherbeei_contig18453.1.1|Name=mRNA_P-wetherbeei_contig18453.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig18453:2..983+ (Phaeothamnion wetherbeei SAG_119_79)back to top |