mRNA_P-wetherbeei_contig1845.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1845.2.1
Unique NamemRNA_P-wetherbeei_contig1845.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1845.2.1 vs. uniprot
Match: A0A2V7DZW7_9BACT (VOC domain-containing protein n=5 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A2V7DZW7_9BACT)

HSP 1 Score: 222 bits (566), Expect = 4.770e-72
Identity = 102/156 (65.38%), Postives = 122/156 (78.21%), Query Frame = 1
Query:   13 MPVTELNHYFVRASNLEATKEFYCKALDLGIMPRPPFPFAGYWLGREGRIWVHMGQHGIPNAELYYRGTPKHAAQDNSGVVDHIAFLATDPDGFRKRFEGMKCDFWARALPEFDLFQIFVRDPDGLTIELNFNNLNPMPDWG-EDYSKMPAVAGAK 477
            MP+TELNHYFVRA++LE TK FYC  L   +MPRP FPF GYWLG  G+I VHMG HGI NA+LYY GTPK A +D++GVVDHIAF+AT+P GF +RF+    +F  R+LPEFDL+QIFV+DP+GLTIELNF  L  + DWG EDYS MP VAG +
Sbjct:    1 MPLTELNHYFVRANDLETTKNFYCDVLGFQVMPRPTFPFPGYWLGVNGKIQVHMGPHGIDNADLYYLGTPKGAVRDHAGVVDHIAFVATEPGGFIRRFKERGIEFQPRSLPEFDLYQIFVKDPNGLTIELNFFGLKDVKDWGGEDYSNMPQVAGMR 156          
BLAST of mRNA_P-wetherbeei_contig1845.2.1 vs. uniprot
Match: A0A7V4CZ96_9BACT (Glyoxalase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A7V4CZ96_9BACT)

HSP 1 Score: 222 bits (565), Expect = 6.780e-72
Identity = 103/154 (66.88%), Postives = 121/154 (78.57%), Query Frame = 1
Query:   13 MPVTELNHYFVRASNLEATKEFYCKALDLGIMPRPPFPFAGYWLGREGRIWVHMGQHGIPNAELYYRGTPKHAAQDNSGVVDHIAFLATDPDGFRKRFEGMKCDFWARALPEFDLFQIFVRDPDGLTIELNFNNLNPMPDWG-EDYSKMPAVAG 471
            MPVTELNHYFVRA++LE TKEFYC  L   +MPRP FPF GYWLG  G+I VHMGQ GI NA+LYY GTPK+AA D++GVVDHIAF+AT+P  F +RFE    ++  R+LPEFDL+QIFV+DP+GLTIELNF  L    DWG EDYS+MP  AG
Sbjct:    1 MPVTELNHYFVRANDLEKTKEFYCDVLGFEVMPRPSFPFPGYWLGVNGKIQVHMGQDGIDNADLYYLGTPKNAATDHAGVVDHIAFVATEPAAFVRRFEERGIEYHPRSLPEFDLYQIFVKDPNGLTIELNFFGLKDQKDWGGEDYSRMPKAAG 154          
BLAST of mRNA_P-wetherbeei_contig1845.2.1 vs. uniprot
Match: A0A2V7A7I7_9BACT (VOC domain-containing protein n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7A7I7_9BACT)

HSP 1 Score: 221 bits (562), Expect = 6.790e-71
Identity = 100/160 (62.50%), Postives = 124/160 (77.50%), Query Frame = 1
Query:    1 KEDVMPVTELNHYFVRASNLEATKEFYCKALDLGIMPRPPFPFAGYWLGREGRIWVHMGQHGIPNAELYYRGTPKHAAQDNSGVVDHIAFLATDPDGFRKRFEGMKCDFWARALPEFDLFQIFVRDPDGLTIELNFNNLNPMPDWG-EDYSKMPAVAGAK 477
            +ED MP+TELNHYF+RA+ LE TK+FYC  L   +MPRP FPF GYWLG  G+I VHMG  GI NA++YY GTPK+AA D++GVVDHIAFLAT+P  F +RF+    DF  R+LPEFDL+QIF++DP+GLTIELNF  +  + DWG E+YSKMP VA  +
Sbjct:   35 EEDFMPLTELNHYFIRANELEKTKDFYCDVLGFQVMPRPTFPFPGYWLGVNGKIQVHMGPDGIDNADMYYLGTPKNAATDHAGVVDHIAFLATEPGNFIRRFKERGIDFQPRSLPEFDLYQIFIKDPNGLTIELNFFGMKDVTDWGGENYSKMPQVASIR 194          
BLAST of mRNA_P-wetherbeei_contig1845.2.1 vs. uniprot
Match: A0A2V7HZI0_9BACT (Glyoxalase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7HZI0_9BACT)

HSP 1 Score: 218 bits (555), Expect = 2.260e-70
Identity = 101/156 (64.74%), Postives = 120/156 (76.92%), Query Frame = 1
Query:   13 MPVTELNHYFVRASNLEATKEFYCKALDLGIMPRPPFPFAGYWLGREGRIWVHMGQHGIPNAELYYRGTPKHAAQDNSGVVDHIAFLATDPDGFRKRFEGMKCDFWARALPEFDLFQIFVRDPDGLTIELNFNNLNPMPDWG-EDYSKMPAVAGAK 477
            MPVTELNHYFVRA++LE TK+FYC  L   +MPRP FPF GYWLG  G+I VHMGQ GI NAELYY GTPK A  D++GVVDHIAFLAT+P GF +R +    ++  R+LPEFDL+QIF++DP+GLTIELNF  L  + DWG E YS MP VAG +
Sbjct:    1 MPVTELNHYFVRANDLERTKDFYCDVLGFSVMPRPSFPFPGYWLGVNGKIQVHMGQDGIDNAELYYLGTPKGAVTDHAGVVDHIAFLATEPGGFIRRLKARGIEYQPRSLPEFDLYQIFLKDPNGLTIELNFFGLKDVTDWGGEAYSAMPQVAGTR 156          
BLAST of mRNA_P-wetherbeei_contig1845.2.1 vs. uniprot
Match: A0A2V6ZZP8_9BACT (Glyoxalase n=3 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6ZZP8_9BACT)

HSP 1 Score: 217 bits (552), Expect = 6.460e-70
Identity = 98/156 (62.82%), Postives = 119/156 (76.28%), Query Frame = 1
Query:   13 MPVTELNHYFVRASNLEATKEFYCKALDLGIMPRPPFPFAGYWLGREGRIWVHMGQHGIPNAELYYRGTPKHAAQDNSGVVDHIAFLATDPDGFRKRFEGMKCDFWARALPEFDLFQIFVRDPDGLTIELNFNNLNPMPDWG-EDYSKMPAVAGAK 477
            MP+TELNHYF+RA+NLE TK FYC  L   +MPRP FPF GYWLG  G+I VHMG  GI NA++YY GTPK+AA D++GVVDHIAFLA +P  F +R    + DF  R+LPEFDL+QIF++DP+GLTIELNF  L  + DWG EDYS+MP  AG +
Sbjct:    1 MPLTELNHYFIRANNLEQTKNFYCDVLGFQVMPRPSFPFPGYWLGVNGKIQVHMGPDGIDNADMYYLGTPKNAATDHAGVVDHIAFLANEPGDFIRRLRARQIDFQPRSLPEFDLYQIFIKDPNGLTIELNFFGLKDVKDWGGEDYSQMPQTAGRR 156          
BLAST of mRNA_P-wetherbeei_contig1845.2.1 vs. uniprot
Match: A0A2V6QE90_9BACT (VOC domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6QE90_9BACT)

HSP 1 Score: 218 bits (554), Expect = 8.610e-70
Identity = 100/160 (62.50%), Postives = 123/160 (76.88%), Query Frame = 1
Query:    1 KEDVMPVTELNHYFVRASNLEATKEFYCKALDLGIMPRPPFPFAGYWLGREGRIWVHMGQHGIPNAELYYRGTPKHAAQDNSGVVDHIAFLATDPDGFRKRFEGMKCDFWARALPEFDLFQIFVRDPDGLTIELNFNNLNPMPDWG-EDYSKMPAVAGAK 477
            +E  MPVTELNHYFVRA++LE TK+FYC  L   +MPRP FPF GYWLG  G+I VHMG  GI NA++YY GTPK+A+ D++GVVDHIAF+AT+P  F +RF     ++  R+LPEFDL+QIFV+DP+GLTIELNF  L  + DWG EDYSKMP  AG +
Sbjct:   27 EEAPMPVTELNHYFVRANDLEKTKDFYCDVLGFQVMPRPTFPFPGYWLGVNGKIQVHMGPDGIDNADMYYLGTPKNASTDHAGVVDHIAFVATEPGAFVRRFRERGLEYQPRSLPEFDLYQIFVKDPNGLTIELNFFGLKDVTDWGGEDYSKMPQAAGMR 186          
BLAST of mRNA_P-wetherbeei_contig1845.2.1 vs. uniprot
Match: A0A1Q7PJ49_9BACT (VOC domain-containing protein n=5 Tax=Bacteria TaxID=2 RepID=A0A1Q7PJ49_9BACT)

HSP 1 Score: 216 bits (551), Expect = 9.180e-70
Identity = 99/156 (63.46%), Postives = 121/156 (77.56%), Query Frame = 1
Query:   13 MPVTELNHYFVRASNLEATKEFYCKALDLGIMPRPPFPFAGYWLGREGRIWVHMGQHGIPNAELYYRGTPKHAAQDNSGVVDHIAFLATDPDGFRKRFEGMKCDFWARALPEFDLFQIFVRDPDGLTIELNFNNLNPMPDWG-EDYSKMPAVAGAK 477
            MP+TELNHYF+RA++LE TK+FYC+ L   +MPRP FPF GYWLG  G+I VHMG  GI NAEL+Y GTPK A  D++GVVDHIAFLAT+P GF +R +    +F  R+LPEFDL+QIF++DP+GLTIELNF  L  + DWG EDYSKMP VA  +
Sbjct:    1 MPLTELNHYFIRANDLEKTKDFYCEVLGFQVMPRPTFPFPGYWLGVNGKIQVHMGPDGIDNAELFYLGTPKGAVTDHAGVVDHIAFLATEPGGFIRRLKERGLEFQPRSLPEFDLYQIFIKDPNGLTIELNFFGLKDVQDWGGEDYSKMPQVASMR 156          
BLAST of mRNA_P-wetherbeei_contig1845.2.1 vs. uniprot
Match: A0A2V7D4I2_9BACT (Glyoxalase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7D4I2_9BACT)

HSP 1 Score: 215 bits (547), Expect = 3.730e-69
Identity = 97/156 (62.18%), Postives = 121/156 (77.56%), Query Frame = 1
Query:   13 MPVTELNHYFVRASNLEATKEFYCKALDLGIMPRPPFPFAGYWLGREGRIWVHMGQHGIPNAELYYRGTPKHAAQDNSGVVDHIAFLATDPDGFRKRFEGMKCDFWARALPEFDLFQIFVRDPDGLTIELNFNNLNPMPDWG-EDYSKMPAVAGAK 477
            MP++ELNHYF+RA+ LE TK+FYC  L   +MPRP FPF GYWLG  G+I VHMG  GI NA++YY GTPK+AA D++GVVDHIAFLAT+P  F +RF+    DF  R+LPEFDL+QIF++DP+GLTIELNF  +  + DWG E+YSKMP VA  +
Sbjct:    1 MPLSELNHYFIRANELEKTKDFYCDVLGFQVMPRPTFPFPGYWLGVNGKIQVHMGPDGIDNADMYYLGTPKNAATDHAGVVDHIAFLATEPGSFIRRFKERGIDFQPRSLPEFDLYQIFIKDPNGLTIELNFFGMKDVTDWGGENYSKMPQVASMR 156          
BLAST of mRNA_P-wetherbeei_contig1845.2.1 vs. uniprot
Match: A0A831Y6N3_9BACT (Glyoxalase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A831Y6N3_9BACT)

HSP 1 Score: 214 bits (546), Expect = 6.240e-69
Identity = 101/161 (62.73%), Postives = 123/161 (76.40%), Query Frame = 1
Query:   13 MPVTELNHYFVRASNLEATKEFYCKALDLGIMPRPPFPFAGYWLGREGRIWVHMGQHGIPNAELYYRGTPKHAAQDNSGVVDHIAFLATDPDGFRKRFEGMKCDFWARALPEFDLFQIFVRDPDGLTIELNFNNLNPMPDWG-EDYSKMP-----AVAGAK 477
            MPVTELNHYFVRA++LEATK+FYC  L   +M RPPFPF GYWLG  G+I VHMG HGI NA+LYY GTPK A +D++GVVDHIAF+AT+P  F +RF     ++  R+LPEFDL+QIFV+DP+GLTIELNF  L  + DWG EDY++MP     A AG +
Sbjct:    1 MPVTELNHYFVRANDLEATKDFYCDVLGFQVMDRPPFPFPGYWLGVGGKIQVHMGPHGIENADLYYLGTPKDAVRDHAGVVDHIAFVATEPGAFIRRFRERGIEYRPRSLPEFDLYQIFVKDPNGLTIELNFFGLKNVTDWGGEDYAQMPRAGTPATAGTR 161          
BLAST of mRNA_P-wetherbeei_contig1845.2.1 vs. uniprot
Match: A0A538RGE6_9BACT (Glyoxalase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A538RGE6_9BACT)

HSP 1 Score: 212 bits (540), Expect = 4.340e-68
Identity = 99/156 (63.46%), Postives = 115/156 (73.72%), Query Frame = 1
Query:   13 MPVTELNHYFVRASNLEATKEFYCKALDLGIMPRPPFPFAGYWLGREGRIWVHMGQHGIPNAELYYRGTPKHAAQDNSGVVDHIAFLATDPDGFRKRFEGMKCDFWARALPEFDLFQIFVRDPDGLTIELNFNNLNPMPDWG-EDYSKMPAVAGAK 477
            MPVTELNHYFVRA++LE TK FYC  L   +MPRP FPF GYWLG  G+I VHMG  GI NA LYY GTP  A  D++GVVDHIAF+ATDP  F +R      ++  R+LPEFDL+QIFV+DP+GLTIELNF  L  + DWG EDYSKMP   GA+
Sbjct:    1 MPVTELNHYFVRANDLEQTKSFYCDVLGFEVMPRPSFPFPGYWLGVNGKIQVHMGPDGIDNAHLYYMGTPTGAVTDHAGVVDHIAFVATDPGAFVRRLRERAVEYQPRSLPEFDLYQIFVKDPNGLTIELNFFGLKDVKDWGGEDYSKMPQAMGAR 156          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1845.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V7DZW7_9BACT4.770e-7265.38VOC domain-containing protein n=5 Tax=unclassified... [more]
A0A7V4CZ96_9BACT6.780e-7266.88Glyoxalase n=1 Tax=Candidatus Rokubacteria bacteri... [more]
A0A2V7A7I7_9BACT6.790e-7162.50VOC domain-containing protein n=2 Tax=Candidatus R... [more]
A0A2V7HZI0_9BACT2.260e-7064.74Glyoxalase n=1 Tax=Candidatus Rokubacteria bacteri... [more]
A0A2V6ZZP8_9BACT6.460e-7062.82Glyoxalase n=3 Tax=Candidatus Rokubacteria bacteri... [more]
A0A2V6QE90_9BACT8.610e-7062.50VOC domain-containing protein n=1 Tax=Candidatus R... [more]
A0A1Q7PJ49_9BACT9.180e-7063.46VOC domain-containing protein n=5 Tax=Bacteria Tax... [more]
A0A2V7D4I2_9BACT3.730e-6962.18Glyoxalase n=1 Tax=Candidatus Rokubacteria bacteri... [more]
A0A831Y6N3_9BACT6.240e-6962.73Glyoxalase n=1 Tax=Candidatus Rokubacteria bacteri... [more]
A0A538RGE6_9BACT4.340e-6863.46Glyoxalase n=1 Tax=Candidatus Rokubacteria bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1845contigP-wetherbeei_contig1845:922..1398 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1205680.CAKO01000038_gene1644
PFAMsGlyoxalase
Model size477
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.52e-28
EggNOG OGsCOG0346@1|root,COG0346@2|Bacteria,1N7R0@1224|Proteobacteria,2U65K@28211|Alphaproteobacteria,2JZ8K@204441|Rhodospirillales
DescriptionGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Cds size465
COG categoryE
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186146.2025607-UTR-P-wetherbeei_contig1845:921..9331683186146.2025607-UTR-P-wetherbeei_contig1845:921..933Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1845 922..933 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186146.2107959-CDS-P-wetherbeei_contig1845:933..13981683186146.2107959-CDS-P-wetherbeei_contig1845:933..1398Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1845 934..1398 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1845.2.1prot_P-wetherbeei_contig1845.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1845 934..1398 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1845.2.1

>prot_P-wetherbeei_contig1845.2.1 ID=prot_P-wetherbeei_contig1845.2.1|Name=mRNA_P-wetherbeei_contig1845.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp
MPVTELNHYFVRASNLEATKEFYCKALDLGIMPRPPFPFAGYWLGREGRI
WVHMGQHGIPNAELYYRGTPKHAAQDNSGVVDHIAFLATDPDGFRKRFEG
MKCDFWARALPEFDLFQIFVRDPDGLTIELNFNNLNPMPDWGEDYSKMPA
VAGAK
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mRNA from alignment at P-wetherbeei_contig1845:922..1398+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1845.2.1 ID=mRNA_P-wetherbeei_contig1845.2.1|Name=mRNA_P-wetherbeei_contig1845.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig1845:922..1398+ (Phaeothamnion wetherbeei SAG_119_79)
AAGGAGGATGTCATGCCCGTTACCGAACTGAACCATTACTTTGTGCGCGC CAGCAACCTGGAGGCGACCAAGGAGTTCTACTGCAAGGCGCTGGACCTCG GCATCATGCCGCGGCCGCCGTTCCCGTTCGCGGGGTACTGGCTCGGGCGG GAGGGCCGCATCTGGGTGCACATGGGGCAGCACGGGATCCCCAACGCCGA GCTCTACTACCGCGGCACGCCAAAGCACGCCGCCCAGGACAATTCCGGCG TGGTCGACCACATCGCCTTCCTCGCGACCGACCCGGACGGCTTTCGCAAG CGCTTCGAGGGCATGAAGTGCGACTTCTGGGCGCGCGCGCTGCCGGAGTT CGACCTGTTCCAGATTTTCGTGCGTGATCCGGACGGCCTCACGATCGAGC TGAATTTCAACAACCTCAACCCCATGCCCGACTGGGGCGAGGACTACTCC AAGATGCCCGCGGTCGCGGGCGCGAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1845:922..1398+

>mRNA_P-wetherbeei_contig1845.2.1 ID=mRNA_P-wetherbeei_contig1845.2.1|Name=mRNA_P-wetherbeei_contig1845.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig1845:922..1398+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCGTTACCGAACTGAACCATTACTTTGTGCGCGCCAGCAACCTGGA
GGCGACCAAGGAGTTCTACTGCAAGGCGCTGGACCTCGGCATCATGCCGC
GGCCGCCGTTCCCGTTCGCGGGGTACTGGCTCGGGCGGGAGGGCCGCATC
TGGGTGCACATGGGGCAGCACGGGATCCCCAACGCCGAGCTCTACTACCG
CGGCACGCCAAAGCACGCCGCCCAGGACAATTCCGGCGTGGTCGACCACA
TCGCCTTCCTCGCGACCGACCCGGACGGCTTTCGCAAGCGCTTCGAGGGC
ATGAAGTGCGACTTCTGGGCGCGCGCGCTGCCGGAGTTCGACCTGTTCCA
GATTTTCGTGCGTGATCCGGACGGCCTCACGATCGAGCTGAATTTCAACA
ACCTCAACCCCATGCCCGACTGGGGCGAGGACTACTCCAAGATGCCCGCG
GTCGCGGGCGCGAAG
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