mRNA_P-wetherbeei_contig18430.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18430.1.1 vs. uniprot
Match: A0A7C4TNV9_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TNV9_9HYPH) HSP 1 Score: 359 bits (922), Expect = 1.080e-120 Identity = 178/279 (63.80%), Postives = 219/279 (78.49%), Query Frame = 1
Query: 124 AEAAFFKDKTVRLLVGYGPGGGYDSYARMIAPYLGKTLGASVVVENLPGAGGIAALNRTAVSPADGLTIQIVNGTGAALSQVLDIQTVRYNVLELTHLGTVSASPWMWMVGPGSNIKTPQDALKPGVKLSWAGSGPIDGLSDGAAFTCTALKLDCRVVIGYKGSNDAALAVIRGEMDAIYVSDTSANNIAKSGSAHAVATIGRKPSRFFPNAPLSFDAVKLDQEAAWLLDFRTAAEDLGRILVAPPKLSPERAQFLRAAVKTTLDDPALRAEGERTERY 960
AEAAFFKDKTV+ +V +GPGGGYD+YARM+AP+ K L A+VVVEN PGAGG+ AL R A + DGLTI IVNGTGAA +Q+ R+++ + HLGTVSASPW+W+V P S IKTPQDA+KPGV++SW+G GP+DGLSDGAAFTC ALKL C++V+GYKGS+DAALAV RGEMDAIYVSDTSANN K+G A A+AT+GR+ SRFF P F+AVKLD + WL DFR+ E+LGRILV PP + R +L+ VK TL DP + AEGE+++RY
Sbjct: 32 AEAAFFKDKTVKFVVPFGPGGGYDAYARMLAPHFAKHLAATVVVENQPGAGGLTALGRLATADPDGLTIMIVNGTGAAFAQLTGQSGARFDLGKFGHLGTVSASPWIWLVTPNSPIKTPQDAMKPGVQISWSGGGPMDGLSDGAAFTCEALKLKCKIVLGYKGSSDAALAVARGEMDAIYVSDTSANNYVKAGQARAIATMGREKSRFFKELPTIFEAVKLDADQQWLFDFRSTVENLGRILVTPPDVPKARLAYLQGIVKKTLTDPEVVAEGEKSKRY 310
BLAST of mRNA_P-wetherbeei_contig18430.1.1 vs. uniprot
Match: A0A1H4PFF9_9HYPH (Tripartite-type tricarboxylate transporter, receptor component TctC n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1H4PFF9_9HYPH) HSP 1 Score: 326 bits (835), Expect = 1.320e-107 Identity = 166/300 (55.33%), Postives = 216/300 (72.00%), Query Frame = 1
Query: 67 CSLAQIA--AAQGANQGTSSGAEAAFFKDKTVRLLVGYGPGGGYDSYARMIAPYLGKTLGASVVVENLPGAGGIAALNRTAVSPADGLTIQIVNGTGAALSQVLDIQTVRYNVLELTHLGTVSASPWMWMVGPGSNIKTPQDALKPGVKLSWAGSGPIDGLSDGAAFTCTALKLDCRVVIGYKGSNDAALAVIRGEMDAIYVSDTSANNIAKSGSAHAVATIGRKPSRFFPNAPLSFDAVKLDQEAAWLLDFRTAAEDLGRILVAPPKLSPERAQFLRAAVKTTLDDPALRAEGERTERY 960
C L +A AA G +Q AE F+K KTVR++VG+GPGGGYD+YARMI+PYL + LGA+VVVEN PGAG I+A+N +++P DGL + + NGT A L+Q++ + VRY++ +LT LGTVSASPW+W+V S +++ D K L+W+ SGPIDGLSDGA TC ALKL+C++V+GYKGS++AALAV R EMDAIYVSDTSANN K+G A+ + R+ SRFFP+ P ++A KL EA WL DF EDLGRIL+ P + P R F+ AA+ TL +P L AEGERT+RY
Sbjct: 8 CMLGAVALLAAMGTSQAQD--AEVQFYKGKTVRMIVGFGPGGGYDAYARMISPYLSQELGANVVVENQPGAGSISAMNNLSIAPPDGLQLMLANGTAAGLAQIMGMSGVRYDLAKLTQLGTVSASPWVWLVPVQSPLRSIDDVRKMDRPLNWSSSGPIDGLSDGAQITCEALKLNCKIVMGYKGSSEAALAVARNEMDAIYVSDTSANNYVKAGDLRALVNMARRKSRFFPDLPTVYEAEKLSPEAQWLFDFHGTVEDLGRILIMPANIPPARLAFINAAIARTLKNPTLIAEGERTQRY 305
BLAST of mRNA_P-wetherbeei_contig18430.1.1 vs. uniprot
Match: A0A1H4SBN4_9HYPH (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Beijerinckia sp. 28-YEA-48 TaxID=1882748 RepID=A0A1H4SBN4_9HYPH) HSP 1 Score: 316 bits (809), Expect = 1.480e-103 Identity = 161/278 (57.91%), Postives = 199/278 (71.58%), Query Frame = 1
Query: 127 EAAFFKDKTVRLLVGYGPGGGYDSYARMIAPYLGKTLGASVVVENLPGAGGIAALNRTAVSPADGLTIQIVNGTGAALSQVLDIQTVRYNVLELTHLGTVSASPWMWMVGPGSNIKTPQDALKPGVKLSWAGSGPIDGLSDGAAFTCTALKLDCRVVIGYKGSNDAALAVIRGEMDAIYVSDTSANNIAKSGSAHAVATIGRKPSRFFPNAPLSFDAVKLDQEAAWLLDFRTAAEDLGRILVAPPKLSPERAQFLRAAVKTTLDDPALRAEGERTERY 960
EAAF+K K V+ +VG G GGG+D+YARMIAPYL + L A+VVVEN GAGGI ALNR A + DGL + I NGT AAL Q++D Q RY++ +L HLG VSA PW+W+V S KTPQD LKPG ++ W G+G DG DGAA TC AL+L+C++++GYKGSN+ ALA+ RGE DA+YVSD+SA I KSG A A ++GRK S PN P F+A KLD E W LDFR + DLGRILV + P R FLRAAVK L DPAL A+GE+++RY
Sbjct: 35 EAAFYKGKIVKFVVGVGAGGGFDTYARMIAPYLARELEATVVVENQVGAGGIVALNRIANAAPDGLQLHIANGTPAALGQIVDNQNARYDLTKLEHLGIVSAYPWIWLVAKDSPFKTPQDVLKPGARIRWGGTGLNDGPGDGAAITCEALRLNCQIILGYKGSNEIALAMERGEQDALYVSDSSAAQIDKSGQARAFLSMGRKRSELLPNVPTVFEAFKLDDEQVWWLDFRNSINDLGRILVTTQGVPPARLAFLRAAVKRALTDPALIADGEKSQRY 312
BLAST of mRNA_P-wetherbeei_contig18430.1.1 vs. uniprot
Match: A0A1Q4BKV0_9HYPH (Uncharacterized protein n=1 Tax=Rhizobiales bacterium 62-17 TaxID=1895810 RepID=A0A1Q4BKV0_9HYPH) HSP 1 Score: 312 bits (800), Expect = 3.200e-102 Identity = 159/278 (57.19%), Postives = 197/278 (70.86%), Query Frame = 1
Query: 127 EAAFFKDKTVRLLVGYGPGGGYDSYARMIAPYLGKTLGASVVVENLPGAGGIAALNRTAVSPADGLTIQIVNGTGAALSQVLDIQTVRYNVLELTHLGTVSASPWMWMVGPGSNIKTPQDALKPGVKLSWAGSGPIDGLSDGAAFTCTALKLDCRVVIGYKGSNDAALAVIRGEMDAIYVSDTSANNIAKSGSAHAVATIGRKPSRFFPNAPLSFDAVKLDQEAAWLLDFRTAAEDLGRILVAPPKLSPERAQFLRAAVKTTLDDPALRAEGERTERY 960
EAAF+K K V+ +VG G GGG+D+YARMIAPYL + LGA+V+VEN GAGGI ALNR A SP DGL + I NGT AAL Q++D Q RY++ +L HLG VSA PW+W+V S K P D LKPG ++ W G+G DG DGAA TC AL+L+C++++GYKGS + ALA+ RGE DA+YVSD+SA I KSG A A ++GRK S PN P F+A KLD + W LDFR + DLGRILV + P R LRAAVK L DPAL AEGE+++RY
Sbjct: 33 EAAFYKGKIVKFIVGVGVGGGFDTYARMIAPYLARELGANVIVENQVGAGGIVALNRIANSPPDGLQLHIANGTPAALGQIVDNQNARYDLTKLEHLGIVSAYPWIWLVAKDSPFKAPADVLKPGARIRWGGTGLNDGPGDGAAITCEALRLNCQIILGYKGSAEIALAMERGEQDALYVSDSSAAQIDKSGQARAFLSMGRKRSELLPNVPTVFEAFKLDDDQIWWLDFRNSINDLGRILVTTQGVPPARLAVLRAAVKRALTDPALIAEGEKSQRY 310
BLAST of mRNA_P-wetherbeei_contig18430.1.1 vs. uniprot
Match: A0A127ESR6_9HYPH (Extra-cytoplasmic solute receptor family protein n=2 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ESR6_9HYPH) HSP 1 Score: 275 bits (702), Expect = 1.140e-87 Identity = 143/277 (51.62%), Postives = 185/277 (66.79%), Query Frame = 1
Query: 127 EAAFFKDKTVRLLVGYGPGGGYDSYARMIAPYLGKTLGASVVVENLPGAGGIAALNRTAVSPADGLTIQIVNGTGAALSQVLDIQTVRYNVLELTHLGTVSASPWMWMVGPGSNIKTPQDALKPGVKLSWAGSGPIDGLSDGAAFTCTALKLDCRVVIGYKGSNDAALAVIRGEMDAIYVSDTSANNIAKSGSAHAVATIGRKPSRFFPNAPLSFDAVKLDQEAAWLLDFRTAAEDLGRILVAPPKLSPERAQFLRAAVKTTLDDPALRAEGERTER 957
E AF+ KTVR++VG G GGGYD ++R+IAPYL KTLG +V+VEN PGAGG+ ALN+ ++P DGL I + GT A ++Q+ Q R+++ + T+L TV A P +W+V P S I+ Q A+ +K WA SG GL GAAFTC AL LDC +V GYKGS DA LAV RGEMDA+YV ++SANN+ KS A+ATI R SRFF + P F+A K+ + W +DF E GR+L+APP + R +LR A+K TL P L AEGER ER
Sbjct: 14 EKAFYAGKTVRMIVGSGVGGGYDVFSRLIAPYLSKTLGTTVIVENQPGAGGLVALNKLYIAPPDGLQISLTQGTMAGIAQLTGDQAARFDLTKFTYLATVGAPPGLWLVPPESPIREVQQAIDAKMKWRWASSGGTSGLGIGAAFTCEALNLDCHIVQGYKGSADAGLAVTRGEMDAVYVPESSANNLVKSKQNWALATISRTKSRFFQDRPTIFEAAKIAPDRVWAMDFLANLEGTGRLLMAPPGIPAARLAYLREAIKETLAIPQLIAEGERMER 290
BLAST of mRNA_P-wetherbeei_contig18430.1.1 vs. uniprot
Match: A0A6N7FCA7_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FCA7_9PROT) HSP 1 Score: 267 bits (682), Expect = 1.680e-84 Identity = 139/279 (49.82%), Postives = 189/279 (67.74%), Query Frame = 1
Query: 124 AEAAFFKDKTVRLLVGYGPGGGYDSYARMIAPYLGKTLGASVVVENLPGAGGIAALNRTAVSPADGLTIQIVNGTGAALSQVLDIQTVRYNVLELTHLGTVSASPWMWMVGPGSNIKTPQDALKPGVKLSWAGSGPIDGLSDGAAFTCTALKLDCRVVIGYKGSNDAALAVIRGEMDAIYVSDTSANNIAKSGSAHAVATIGRKPSRFFPNAPLSFDAVKLDQEAAWLLDFRTAAEDLGRILVAPPKLSPERAQFLRAAVKTTLDDPALRAEGERTERY 960
A+A ++K KTVR+LVG+G GGGYD+YARM+AP+ + LGA+VVVEN PGAGG+ +LNR A +PADGL + IVNGTGAA+ Q+L ++ VR+++ L HLG S W+ +V P S T QD LK G + + SG +D L GA+F C A++L C++V GY+GS ALA+ +GEMDA+YVS+TSA N KSG+A A+ T RK + FP+ P + +KL+ E W +D R E LGR+LVAPP + LRA K L D + AEGE+ +R+
Sbjct: 24 ADAGYYKGKTVRILVGFGAGGGYDAYARMLAPHFAQRLGATVVVENQPGAGGMNSLNRFANAPADGLQMTIVNGTGAAVQQILGVEGVRFDLTALKHLGITDYSRWLLLVQPKSPHSTVQDLLKSGESIRFGASGRLDALGVGASFACHAIQLKCQIVAGYQGSAAVALALAQGEMDALYVSETSAYNYVKSGNAKAITTWNRKRADLFPDLPSVTEVLKLNDEQLWWVDIRNTIEGLGRMLVAPPSTPKAQVDTLRATAKAILTDKDVIAEGEKRKRF 302
BLAST of mRNA_P-wetherbeei_contig18430.1.1 vs. uniprot
Match: A0A6N7FG71_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FG71_9PROT) HSP 1 Score: 267 bits (682), Expect = 1.780e-84 Identity = 139/275 (50.55%), Postives = 187/275 (68.00%), Query Frame = 1
Query: 136 FFKDKTVRLLVGYGPGGGYDSYARMIAPYLGKTLGASVVVENLPGAGGIAALNRTAVSPADGLTIQIVNGTGAALSQVLDIQTVRYNVLELTHLGTVSASPWMWMVGPGSNIKTPQDALKPGVKLSWAGSGPIDGLSDGAAFTCTALKLDCRVVIGYKGSNDAALAVIRGEMDAIYVSDTSANNIAKSGSAHAVATIGRKPSRFFPNAPLSFDAVKLDQEAAWLLDFRTAAEDLGRILVAPPKLSPERAQFLRAAVKTTLDDPALRAEGERTERY 960
++K KT++ +VG+G GGGYD+Y+RM+A + K LGA+V+VEN PGAGG+ ALNR +PADGL + IVNGTGA+L QVL + VR+++ E+ +LG + A W+ +V P S T +D K ++SW GSG I G SDGAAFTC LKL+C +V GYKGS ALA+ +GEMD +YVS+TSA +S +A AVAT RK S FP+ P F+ KLD + AW +D+R A E +GR+LVAPP ERA LRAA + DP + E + +R+
Sbjct: 29 YYKGKTLKFVVGFGAGGGYDAYSRMLATHFEKELGANVIVENQPGAGGLRALNRFQRAPADGLQMTIVNGTGASLQQVLAMSGVRFDLTEMKYLGIIDAPRWIVLVKPNSPHSTLEDLKKSTGRISWGGSGKISGTSDGAAFTCHTLKLNCNIVSGYKGSAAVALALAQGEMDGLYVSETSAFKYVQSKNAKAVATWNRKRSTLFPDLPTVFEQQKLDDKQAWWVDYRNAVEGVGRVLVAPPATPKERAATLRAAAHKIMSDPKVVEEFAKKKRF 303
BLAST of mRNA_P-wetherbeei_contig18430.1.1 vs. uniprot
Match: Q1YKY2_AURMS (Putative extra-cytoplasmic solute receptors (Bug family) n=1 Tax=Aurantimonas manganoxydans (strain ATCC BAA-1229 / DSM 21871 / SI85-9A1) TaxID=287752 RepID=Q1YKY2_AURMS) HSP 1 Score: 239 bits (609), Expect = 1.980e-73 Identity = 125/273 (45.79%), Postives = 179/273 (65.57%), Query Frame = 1
Query: 121 GAEAAFFKDKTVRLLVGYGPGGGYDSYARMIAPYLGKTLGASVVVENLPGAGGIAALNRTAVSPADGLTIQIVNGTGAALSQVLDIQTVRYNVLELTHLGTVSASPWMWMVGPGS---NIKTPQDALKPGVKLSWAGSGPIDGLSDGAAFTCTALKLDCRVVIGYKGSNDAALAVIRGEMDAIYVSDTSANNIAKSGSAHAVATIGRKPSRFFPNAPLSFDAVKLDQEAAWLLDFRTAAEDLGRILVAPPKLSPERAQFLRAAVKTTLDDPAL 930
GA A F+K++TVRL+VG GPGGG+D YAR++AP LGK GA+VVVEN PG GGI A+N+ A + DGL++ ++NG AAL Q+ + VR+ + L +G V+A PW+ +V S ++K +A K G LS++G G +DG +D AA C AL+L C +V+G+KGS++A+LA IRG++ I ++D SA + ++ GS VA IG S+ P+ P F+AV + QE A+ +DFR D+GR L+ P ER +LR A +T L DPA
Sbjct: 25 GAAADFYKNETVRLIVGTGPGGGFDQYARLLAPELGKVTGATVVVENRPGGGGITAINQVAGADPDGLSVMLINGVPAALGQITEAPAVRFELQNLPFVGRVAAEPWVLLVSKNSGYTSLKDLVEASKAGKTLSFSGLGRVDGPTDTAAVVCEALELSCNLVVGFKGSSEASLAAIRGDVTGIAITDRSARDYSQDGSLIPVAVIGHNRSQLLPDVPTIFEAVDVPQEGAFWIDFRAGIVDIGRALITTPGTPDERISYLREAFETILADPAF 297
BLAST of mRNA_P-wetherbeei_contig18430.1.1 vs. uniprot
Match: A0A4Y8RKX6_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Jiella endophytica TaxID=2558362 RepID=A0A4Y8RKX6_9HYPH) HSP 1 Score: 226 bits (575), Expect = 4.610e-68 Identity = 116/268 (43.28%), Postives = 173/268 (64.55%), Query Frame = 1
Query: 136 FFKDKTVRLLVGYGPGGGYDSYARMIAPYLGKTLGASVVVENLPGAGGIAALNRTAVSPADGLTIQIVNGTGAALSQVLDIQTVRYNVLELTHLGTVSASPWMWMVGPGS---NIKTPQDALKPGVKLSWAGSGPIDGLSDGAAFTCTALKLDCRVVIGYKGSNDAALAVIRGEMDAIYVSDTSANNIAKSGSAHAVATIGRKPSRFFPNAPLSFDAVKLDQEAAWLLDFRTAAEDLGRILVAPPKLSPERAQFLRAAVKTTLDDPAL 930
F+K +T+ L+VG GPGGG+D YAR++AP L GA+VVVEN PG GGI A+N+ A + ADGL++ ++NG AAL Q+ VR+ + +L LG V+A PW+ +V S ++K +A K G LS++G G +DG +D AA C AL+L+C++V+G+KGS++A+LA IRG++ V+D SA + ++ GS +A +G S+ P+ P F+AV + ++AA+ +DFR D+GR L+ P +R FLR A L DP L
Sbjct: 51 FYKGETISLIVGTGPGGGFDQYARLLAPELSDATGATVVVENRPGGGGITAINQVASADADGLSVMLINGVPAALGQITGAPAVRFKLQDLPFLGRVAAEPWVLLVSKQSGYTSLKDLVEASKGGKTLSFSGLGRVDGPTDTAAVVCEALQLNCKLVVGFKGSSEASLAAIRGDVTGFAVTDRSARDYSQDGSLVPIAVVGHNRSKLLPDVPTIFEAVDVPEDAAFWIDFRAKVVDVGRALITTPGTPDDRVAFLREAFAKILSDPEL 318
BLAST of mRNA_P-wetherbeei_contig18430.1.1 vs. uniprot
Match: A0A7C7KPZ0_9PROT (Uncharacterized protein n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7KPZ0_9PROT) HSP 1 Score: 218 bits (554), Expect = 3.450e-65 Identity = 112/267 (41.95%), Postives = 166/267 (62.17%), Query Frame = 1
Query: 130 AAFFKDKTVRLLVGYGPGGGYDSYARMIAPYLGKTLGASVVVENLPGAGGIAALNRTAVSPADGLTIQIVNGTGAALSQVLDIQTVRYNVLELTHLGTVSASPWMWMVGPGSNIKTPQDALKPGVKLSWAGSGPIDGLSDGAAFTCTALKLDCRVVIGYKGSNDAALAVIRGEMDAIYVSDTSANNIAKSGSAHAVATIGRKPSRFFPNAPLSFDAVKLDQEAAWLLDFRTAAEDLGRILVAPPKLSPERAQFLRAAVKTTLDDPAL 930
A F++ K V+L+VGYG GGGYD+YAR++AP+L LGA+VVVEN PG GG ALNR + ADGLT+ ++NG + +SQ++ + VR+++ LT LG V++ P + + S ++ DA + W +G D L+ AA TAL L+ +++GYKGS +A LA IRGE+DA+ +S++SA AK G +A GR+ S P P F+ L+ +AAW D+ +GRI V+ P + +R +FLR AV+ L+DP +
Sbjct: 28 AEFYRGKVVKLVVGYGAGGGYDTYARLLAPHLEAQLGATVVVENRPGGGGNLALNRLMTAKADGLTLMLINGRASTVSQLVGTEGVRFDLTRLTVLGRVTSEPRVILFSAASPYRSLADAQGSDRVIKWGAAGRTDSLASVAAMASTALSLNSEIIMGYKGSKEAGLAAIRGEVDALVLSESSAAKYAKGGMVIPIAVFGRERSELLPELPTVFEVASLEDDAAWWADYTEQLTKIGRIFVSTPDVPEDRTRFLRQAVQAVLEDPQI 294 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18430.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18430.1.1 >prot_P-wetherbeei_contig18430.1.1 ID=prot_P-wetherbeei_contig18430.1.1|Name=mRNA_P-wetherbeei_contig18430.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=320bp MIEIWKQRAIVVARGVVAAAASCSLAQIAAAQGANQGTSSGAEAAFFKDKback to top mRNA from alignment at P-wetherbeei_contig18430:2..961- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18430.1.1 ID=mRNA_P-wetherbeei_contig18430.1.1|Name=mRNA_P-wetherbeei_contig18430.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=960bp|location=Sequence derived from alignment at P-wetherbeei_contig18430:2..961- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18430:2..961- >mRNA_P-wetherbeei_contig18430.1.1 ID=mRNA_P-wetherbeei_contig18430.1.1|Name=mRNA_P-wetherbeei_contig18430.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=960bp|location=Sequence derived from alignment at P-wetherbeei_contig18430:2..961- (Phaeothamnion wetherbeei SAG_119_79)back to top |