mRNA_P-wetherbeei_contig18424.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18424.1.1
Unique NamemRNA_P-wetherbeei_contig18424.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18424.1.1 vs. uniprot
Match: A0A7X8XQ67_9BURK (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XQ67_9BURK)

HSP 1 Score: 320 bits (819), Expect = 3.340e-103
Identity = 166/289 (57.44%), Postives = 204/289 (70.59%), Query Frame = 1
Query:    1 TLDALTSVLGGQLLQGDLQVAVTGVEYDSRRVQPGQIFVCVPGLTVDGHTYAQGAVARGAALLVVERPLAEITGVPQIQVRNARRALAKLAAGFSGRPADEMTLVGITGTNGKTTTSHFCEAVLKSREKNCGLIGTIQATVGGQAVATANTTPESLHLHQLLREMRDCGQDAAVMEVSSHSLELDRVFGMPFDVAVFTNLTHDHLDFHGDMENYFQAKLRLFQGLAYRMDRMA-PYAVVNIDDAYGQRIIPFLKVPYITYGTNPAAHLRATEIEAGIDGVSYTLESPIG 864
            +L  L  VL G   QGD  + V  + YDSR V+PG +FVCV G   DGH +A  AV RGA  L+VER    + GVP+I V + RRA+A LAA   GRPAD +  VGITGTNGKTTTS+  EAVLK+R  N GL+GTI+A VGG     ANTTPESL LH+L  E+   GQD+ VMEVSSH+L LDR +G+P+D+AVFTNLT DHLDFHG ME+YFQAKLRLF  L     R    YAV+N+DD YG+R++  L+VP++TYGT   AH+RA +IEA  DG+SY L +P+G
Sbjct:    3 SLAELVRVLDGVQFQGDPGLVVRDLAYDSREVKPGDLFVCVEGFRSDGHHFAGEAVRRGAVALLVEREPEGVEGVPRIVVPDCRRAMAILAAEMMGRPADRLLTVGITGTNGKTTTSYLVEAVLKARGHNPGLLGTIEARVGGSVRRLANTTPESLDLHRLFAEIERSGQDSVVMEVSSHALALDRTYGIPYDIAVFTNLTQDHLDFHGTMEDYFQAKLRLFHKLGTCCHRPCNAYAVLNLDDPYGERVLANLRVPFVTYGTRADAHIRAEDIEASPDGLSYRLVTPLG 291          
BLAST of mRNA_P-wetherbeei_contig18424.1.1 vs. uniprot
Match: A0A355TSH1_9BACT (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TSH1_9BACT)

HSP 1 Score: 282 bits (721), Expect = 2.120e-88
Identity = 145/279 (51.97%), Postives = 198/279 (70.97%), Query Frame = 1
Query:   46 GDLQVAVTGVEYDSRRVQPGQIFVCVPGLTVDGHTYAQGAVARGAALLVVERPLAEI--TGVPQIQVRNARRALAKLAAGFSGRPADEMTLVGITGTNGKTTTSHFCEAVLKSREKNCGLIGTIQATVGGQAVATANTTPESLHLHQLLREMRDCGQDAAVMEVSSHSLELDRVFGMPFDVAVFTNLTHDHLDFHGDMENYFQAKLRLFQGLAYRMDR-MAPYAVVNIDDAYGQRIIPFLK--VPYITYGTNPAAHLRATEIEAGIDGVSYTLESPIGD 867
            GD  V V+G+  DSR+V+PG +FVCV G   DGH +A  AVA+GA  LVVE    ++  +G+  I+ +  RRALA LA+ F G PA ++  +GITGTNGKTTTS+  EAVLK+   + G++GTI+A V G+    +NTTP S  LH++  +M + GQD+ VMEVSSH++ LDRV+G+P+D+AVFTNLT DHLDFHG MENYFQAK +LF  L    +R + P+AV+N+DD Y +R+I  +K  VP ITYGT+  A +RA  + AG  G+S+TLE+ +G+
Sbjct:   18 GDPCVEVSGLSCDSRQVKPGDLFVCVTGFQSDGHAFAADAVAKGAKALVVEHIPEDVANSGITFIKTKKTRRALAILASHFFGNPAQKLLNIGITGTNGKTTTSYLVEAVLKAAGYDPGMLGTIEAHVAGEVRKLSNTTPGSFDLHKMFAQMVEAGQDSVVMEVSSHAIALDRVYGIPYDIAVFTNLTQDHLDFHGTMENYFQAKAKLFTRLGVYGERAVGPFAVINLDDPYSERLIGLIKDRVPVITYGTSNKADVRAFNVVAGPSGLSFTLETRVGE 296          
BLAST of mRNA_P-wetherbeei_contig18424.1.1 vs. uniprot
Match: K4LHQ0_THEPS (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=2 Tax=Thermacetogenium phaeum TaxID=85874 RepID=K4LHQ0_THEPS)

HSP 1 Score: 269 bits (687), Expect = 9.490e-84
Identity = 139/273 (50.92%), Postives = 182/273 (66.67%), Query Frame = 1
Query:   52 LQVAVTGVEYDSRRVQPGQIFVCVPGLTVDGHTYAQGAVARGAALLVVERPLAEITGVPQIQVRNARRALAKLAAGFSGRPADEMTLVGITGTNGKTTTSHFCEAVLKSREKNCGLIGTIQATVGGQAVATANTTPESLHLHQLLREMRDCGQDAAVMEVSSHSLELDRVFGMPFDVAVFTNLTHDHLDFHGDMENYFQAKLRLFQGLAYRMDRMAP-YAVVNIDDAYGQRIIPFLKVPYITYGTNPAAHLRATEIEAGIDGVSYTLESPIGD 867
            L V V GV YDSR+V+PG IFVC+ G   DGH Y Q A+ARGAA  V+E+ +    GVP  +VR++RRALA + A + G+P+  +T++G+TGTNGKTTTSH  EAVL++R ++ GLIGTI   +G        TTPESL L ++LREM + G  A  MEVSSH+L LDRV    FD+ VFTNLT DHLDFHG++++Y  AK+RLFQGL  +  +  P YAVVN DD  G+ I+   KVP ITYG    A +RA ++    +G  + +    GD
Sbjct:   20 LHVPVAGVHYDSRQVRPGYIFVCIVGYRTDGHLYIQDAIARGAAGFVIEKDVPLPPGVPYARVRSSRRALAVIGANYYGQPSRSLTVIGVTGTNGKTTTSHLIEAVLRARGEHTGLIGTIWIKMGDDKQPVERTTPESLDLQRILREMVNSGISAVTMEVSSHALYLDRVAECEFDIGVFTNLTQDHLDFHGNLKDYLAAKMRLFQGLGEKRTKKRPSYAVVNCDDPAGRAIVQNTKVPVITYGIREEADVRARDVRLTGEGSDFIVSCREGD 292          
BLAST of mRNA_P-wetherbeei_contig18424.1.1 vs. uniprot
Match: A0A2T0AMV3_9THEO (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Moorella humiferrea TaxID=676965 RepID=A0A2T0AMV3_9THEO)

HSP 1 Score: 262 bits (669), Expect = 5.210e-81
Identity = 140/289 (48.44%), Postives = 183/289 (63.32%), Query Frame = 1
Query:    1 TLDALTSVLGGQLLQGDLQVAVTGVEYDSRRVQPGQIFVCVPGLTVDGHTYAQGAVARGAALLVVERPLAEITGVPQIQVRNARRALAKLAAGFSGRPADEMTLVGITGTNGKTTTSHFCEAVLKSREKNCGLIGTIQATVGGQAVATANTTPESLHLHQLLREMRDCGQDAAVMEVSSHSLELDRVFGMPFDVAVFTNLTHDHLDFHGDMENYFQAKLRLFQGLAYRMDRMAPYAVVNIDDAYGQRIIPFLKVPYITYGTNPAAHLRATEIEAGIDGVSYTLESPIGD 867
            TL+ LT  +  +   G+ +  + G+ YDSR+V+PG +FV V G T DGH Y   A+ARGA  +V+E  +    GVP +QV  +RRAL  LAA F   P+  + L+G+TGTNGKTTT+H  +AVL++  +  GL+GTI   +G + +   +TTPESL L +LL      G    VMEVSSH+L L RV G  FD AVFTNLT DHLDFH DME+YFQAK RLF+ L   +     YAV+N DDAYGQR+     VP ITYG +PA H+RA +I    +G +  L  P G+
Sbjct:    2 TLEELTEGVVVKARGGEQRTPLKGIHYDSRKVEPGFLFVAVKGFTTDGHRYISDALARGAVAVVLEEKVPLPPGVPWVQVEESRRALGLLAARFYSYPSRMVRLIGVTGTNGKTTTTHLIQAVLEAAGRPTGLVGTIFNRMGERVLPAVHTTPESLELQELLNRFVGLGARYVVMEVSSHALALHRVAGAEFDAAVFTNLTQDHLDFHRDMEDYFQAKARLFRNLNNGVKNGPKYAVINGDDAYGQRLKDLTPVPVITYGLSPACHVRALDIRLEANGAACRLLWPGGE 290          
BLAST of mRNA_P-wetherbeei_contig18424.1.1 vs. uniprot
Match: D5X9A6_THEPJ (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=2 Tax=Thermincola TaxID=278993 RepID=D5X9A6_THEPJ)

HSP 1 Score: 259 bits (661), Expect = 7.380e-80
Identity = 134/287 (46.69%), Postives = 180/287 (62.72%), Query Frame = 1
Query:    7 DALTSVLGGQLLQGDLQVAVTGVEYDSRRVQPGQIFVCVPGLTVDGHTYAQGAVARGAALLVVERPLAEITGVPQIQVRNARRALAKLAAGFSGRPADEMTLVGITGTNGKTTTSHFCEAVLKSREKNCGLIGTIQATVGGQAVATANTTPESLHLHQLLREMRDCGQDAAVMEVSSHSLELDRVFGMPFDVAVFTNLTHDHLDFHGDMENYFQAKLRLFQGLAYRMDRMA-PYAVVNIDDAYGQRIIPFLKVPYITYGTNPAAHLRATEIEAGIDGVSYTLESPIG 864
            D L ++ G Q+ QGDL V + G+ YDSR+VQPG  F+C+ G   DGH +AQ AV  GA +++ E+P+   + V  + V + R ALA + A F   P D++ ++G+TGTNGKTTT+H  E +L    K  GLIGTI+  +  + +   NTTPESL L  LL EM D G D AVMEVSSH+LEL+RV G  +D A+FTN+T DHLDFH  M+NY  AK +LF  L     +    Y ++NIDD+ GQ  +       ITYG   AA +RA +I+   DGVS+T  +P G
Sbjct:    6 DLLKNIYGAQV-QGDLTVQIEGLAYDSRKVQPGFAFICIEGYKTDGHLFAQNAVENGATVIIAEKPVTVPSSVTVVTVEDTREALAYMGAAFYDYPGDKLNIIGVTGTNGKTTTTHLIENILVKAGKKVGLIGTIKNKIIDRVLPVTNTTPESLDLQALLAEMVDAGVDYAVMEVSSHALELNRVAGCEYDQAIFTNITQDHLDFHETMDNYLAAKQKLFINLGKNSRKSRNKYGIINIDDSKGQSFLEVTHGQVITYGIQSAADVRAEKIDLRSDGVSFTAVTPRG 291          
BLAST of mRNA_P-wetherbeei_contig18424.1.1 vs. uniprot
Match: A0A2T2WEK6_9FIRM (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Sulfobacillus acidophilus TaxID=53633 RepID=A0A2T2WEK6_9FIRM)

HSP 1 Score: 256 bits (655), Expect = 5.520e-79
Identity = 134/288 (46.53%), Postives = 176/288 (61.11%), Query Frame = 1
Query:    1 TLDALTSVLGGQLLQGDLQVAVTGVEYDSRRVQPGQIFVCVPGLTVDGHTYAQGAVARGAALLVVERPLAEITGVPQIQVRNARRALAKLAAGFSGRPADEMTLVGITGTNGKTTTSHFCEAVLKSREKNCGLIGTIQATVGGQAVATANTTPESLHLHQLLREMRDCGQDAAVMEVSSHSLELDRVFGMPFDVAVFTNLTHDHLDFHGDMENYFQAKLRLFQGLAYRMDRMAPYAVVNIDDAYGQRIIPFLKVPYITYGTNPAAHLRATEIEAGIDGVSYTLESPIG 864
            T+D L   +G   + G+ QV VTG+++DSR+V+ G +F  +PG   DGH Y   A ARGAA  +VERP A   G   I V NAR ALA  A  F G P+  + +VG+TGTNGKTTT+H   A+L+  +  CGL GT+   +G +      TTPE+  L ++LR M D G  AAVMEVSSH+L L RV  + +DV VFTNLT DHLDFH D E+YF+AK  LF+ L   + +    AV+N DD Y  R+I   +VP +TYG      +RAT++    DGV +T   P G
Sbjct:    2 TVDELVGQMGQGHVVGNGQVTVTGIQHDSRQVEKGDLFCAIPGFHTDGHLYCAEAQARGAAAFLVERPDALPAGATAIVVANARAALAHAADVFYGHPSGRLWMVGVTGTNGKTTTTHLVRAILEGSDVACGLTGTLHTLIGPETFKVVRTTPEAPDLQRILRYMGDRGMHAAVMEVSSHALALSRVDTVDYDVGVFTNLTQDHLDFHKDFESYFRAKAMLFERLGSGLKKGPQAAVINGDDRYAGRLIELTRVPVVTYGLGLGVDVRATDVAVSSDGVRFTAHFPSG 289          
BLAST of mRNA_P-wetherbeei_contig18424.1.1 vs. uniprot
Match: A0A6I5ZTB9_9THEO (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Moorella glycerini TaxID=55779 RepID=A0A6I5ZTB9_9THEO)

HSP 1 Score: 255 bits (652), Expect = 1.810e-78
Identity = 133/280 (47.50%), Postives = 177/280 (63.21%), Query Frame = 1
Query:    1 TLDALTSVLGGQLLQGDLQVAVTGVEYDSRRVQPGQIFVCVPGLTVDGHTYAQGAVARGAALLVVERPLAEITGVPQIQVRNARRALAKLAAGFSGRPADEMTLVGITGTNGKTTTSHFCEAVLKSREKNCGLIGTIQATVGGQAVATANTTPESLHLHQLLREMRDCGQDAAVMEVSSHSLELDRVFGMPFDVAVFTNLTHDHLDFHGDMENYFQAKLRLFQGLAYRMDRMAPYAVVNIDDAYGQRIIPFLKVPYITYGTNPAAHLRATEIEAGIDGVS 840
            TL+ L + +      GD QV++ G+ YDSR+VQPG +FV + G   DGH Y   A+ARGA  +V+E  +    GV  ++V N+RRAL  LAA F G P+  + L+G+TGTNGKTTT+H  +AVL+   ++ GL+GTI   +G + +   +TTPE+L L  LL ++ + G    VMEVSSH+L L RV G  FDVAVFTNLT DHLDFH DME+YFQ K RLFQ L   +     YAV+N DDAY  R+I    V  +TYG +P   +RA +I     G +
Sbjct:    2 TLEELVAAIDVIDRGGDRQVSLAGLHYDSRQVQPGFLFVAIKGFKTDGHLYINHALARGAVAVVLEEEVPLPPGVAWVRVSNSRRALGMLAARFYGYPSHRLRLIGVTGTNGKTTTTHLIQAVLEGAGRSTGLLGTIANRLGDKVLPAVHTTPEALDLQALLHQLVNLGAQGVVMEVSSHALALHRVEGAEFDVAVFTNLTQDHLDFHQDMEDYFQVKARLFQALGKGVKERPKYAVINGDDAYSARLITLTPVAVVTYGCSPECQVRARDINLTAGGAT 281          
BLAST of mRNA_P-wetherbeei_contig18424.1.1 vs. uniprot
Match: A0A7V6YHV3_9FIRM (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7V6YHV3_9FIRM)

HSP 1 Score: 255 bits (651), Expect = 2.020e-78
Identity = 135/285 (47.37%), Postives = 180/285 (63.16%), Query Frame = 1
Query:    1 TLDALTSVLGGQ-LLQGDLQVAVTGVEYDSRRVQPGQIFVCVPGLTVDGHTYAQGAVARGAALLVVERPLAEITGVPQIQVRNARRALAKLAAGFSGRPADEMTLVGITGTNGKTTTSHFCEAVLKSREKNCGLIGTIQATVGGQAVATANTTPESLHLHQLLREMRDCGQDAAVMEVSSHSLELDRVFGMPFDVAVFTNLTHDHLDFHGDMENYFQAKLRLFQGLAYRMDRMAPYAVVNIDDAYGQRIIPFLKVPYITYGTNPAAHLRATEIEAGIDGVSYTLE 852
            +L  LT  L  + +L G L   +TGV+YDSR+V+PG +FVC+PG   DGH YA  AVARGAA LVVERP+   +GV  +QV +AR ALAKLAA F G P+    L+G+TGTNGKT+T+   EA+ +   K  GL+GTI   +G + +  ++TTPE++ L +L + M + G D  +MEVSSH+L L RV    FDVAVFTNLT DHLDFH D ++Y +AK +LF  LA        Y VVN DD +G   +    VP +TY     +  RA +I+    G S+ L+
Sbjct:    3 SLQTLTEALETKAILTGGLDSDITGVQYDSRQVEPGNVFVCIPGFKTDGHLYAGDAVARGAAALVVERPVEVPSGVTVVQVPDARAALAKLAASFYGHPSRRFRLIGVTGTNGKTSTTILLEAIFRRWGKKTGLVGTIANRIGEKVLPASHTTPEAVDLQKLFQLMAEAGTDYVIMEVSSHALSLHRVAETEFDVAVFTNLTRDHLDFHRDFDDYREAKGKLFAALAGGTKGEQKYGVVNRDDPHGSYFLQISPVPVLTYSLTEPSDYRAADIKITAKGASFRLQ 287          
BLAST of mRNA_P-wetherbeei_contig18424.1.1 vs. uniprot
Match: A0A0C7NGI1_9THEO (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=3 Tax=Moorella TaxID=44260 RepID=A0A0C7NGI1_9THEO)

HSP 1 Score: 255 bits (651), Expect = 2.560e-78
Identity = 135/289 (46.71%), Postives = 181/289 (62.63%), Query Frame = 1
Query:    1 TLDALTSVLGGQLLQGDLQVAVTGVEYDSRRVQPGQIFVCVPGLTVDGHTYAQGAVARGAALLVVERPLAEITGVPQIQVRNARRALAKLAAGFSGRPADEMTLVGITGTNGKTTTSHFCEAVLKSREKNCGLIGTIQATVGGQAVATANTTPESLHLHQLLREMRDCGQDAAVMEVSSHSLELDRVFGMPFDVAVFTNLTHDHLDFHGDMENYFQAKLRLFQGLAYRMDRMAPYAVVNIDDAYGQRIIPFLKVPYITYGTNPAAHLRATEIEAGIDGVSYTLESPIGD 867
            TL+ L + +      GD QV + G+ YDSR+VQPG +FV + G   DGH Y   A+ARGA  +V+E  +    GV  ++V ++RRAL  LAA F G P+  + L+G+TGTNGKTTT+H  +AVL+   +  GL+GTI   +G + + TA+TTPE+L L  LL ++ + G    VMEVSSH+L L RV G  FDVAVFTNLT DHLDFH DME+YF+ K RLFQ L   +     YAV+N DD Y  R+I    VP +TYG +P   +RA +I     G +  +  P G+
Sbjct:    2 TLEELVAAIDVIDRGGDQQVYLAGLHYDSRQVQPGFLFVAIKGFKTDGHLYINDALARGAVAVVLEEEVPLPPGVAWVRVGDSRRALGMLAARFYGYPSHRLRLIGVTGTNGKTTTTHLIQAVLEGAGRPTGLLGTIGNRLGDKVLPTAHTTPEALDLQALLHQLVNLGAQGVVMEVSSHALALHRVEGAEFDVAVFTNLTQDHLDFHRDMEDYFKVKARLFQALGKGVKGGPKYAVINGDDPYSARLITLTPVPVVTYGCSPECQVRARDINLTAGGATCRVTWPGGE 290          
BLAST of mRNA_P-wetherbeei_contig18424.1.1 vs. uniprot
Match: A0A7C6V257_9FIRM (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Syntrophomonadaceae bacterium TaxID=2093811 RepID=A0A7C6V257_9FIRM)

HSP 1 Score: 254 bits (650), Expect = 3.250e-78
Identity = 133/267 (49.81%), Postives = 170/267 (63.67%), Query Frame = 1
Query:   52 LQVAVTGVEYDSRRVQPGQIFVCVPGLTVDGHTYAQGAVARGAALLVVERPLAEITGVPQIQVRNARRALAKLAAGFSGRPADEMTLVGITGTNGKTTTSHFCEAVLKSREKNCGLIGTIQATVGGQAVATANTTPESLHLHQLLREMRDCGQDAAVMEVSSHSLELDRVFGMPFDVAVFTNLTHDHLDFHGDMENYFQAKLRLFQGLAYRMDRMAP-YAVVNIDDAYGQRIIPFLKVPYITYGTNPAAHLRATEIEAGIDGVSYTL 849
            L   +TG+ YDSR+V+PG IFVC+ G  VDGH++ + A+ RGA  ++ ER +    GV  +QV + R ALA ++A F G P+ ++ L G+TGTNGKTTT+H  EAVL++  +  GLIGT+   VG Q  A  +TTPESL L  LLREM D G  A  MEVSSH L L RV    FD AVFTNLT DHLDFH DM  Y +AK+ LF+GL     +  P YAVVN DD  G  I+    VP ITYG    + L+A +++    G+SY L
Sbjct:   20 LNTEITGIHYDSRQVKPGFIFVCIKGFRVDGHSFVKDALERGAVGVIGERKVTVPEGVAWVQVSDTRSALASISANFYGHPSRQLFLCGVTGTNGKTTTTHLIEAVLRAGGEKTGLIGTVWNKVGEQKRAVVHTTPESLELQALLREMADAGVGAVAMEVSSHGLVLQRVAQCEFDAAVFTNLTQDHLDFHKDMREYLEAKMLLFRGLGRNRTKRRPCYAVVNADDPSGPEIVENTSVPVITYGIREKSDLKAEDVKLSPRGISYIL 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18424.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XQ67_9BURK3.340e-10357.44UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-dia... [more]
A0A355TSH1_9BACT2.120e-8851.97UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-dia... [more]
K4LHQ0_THEPS9.490e-8450.92UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-dia... [more]
A0A2T0AMV3_9THEO5.210e-8148.44UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-dia... [more]
D5X9A6_THEPJ7.380e-8046.69UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-dia... [more]
A0A2T2WEK6_9FIRM5.520e-7946.53UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-dia... [more]
A0A6I5ZTB9_9THEO1.810e-7847.50UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-dia... [more]
A0A7V6YHV3_9FIRM2.020e-7847.37UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-dia... [more]
A0A0C7NGI1_9THEO2.560e-7846.71UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-dia... [more]
A0A7C6V257_9FIRM3.250e-7849.81UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-dia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18424contigP-wetherbeei_contig18424:486..1352 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1089553.Tph_c12590
Preferred namemurE
PFAMsMur_ligase,Mur_ligase_C,Mur_ligase_M
Model size867
Max annot lvl186801|Clostridia
KEGG rclassRC00064,RC00090
KEGG koko:K01928
KEGG ReactionR02788
KEGG Pathwayko00300,ko00550,map00300,map00550
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.56e-84
EggNOG OGsCOG0769@1|root,COG0769@2|Bacteria,1TPQE@1239|Firmicutes,248Q4@186801|Clostridia,42ETI@68295|Thermoanaerobacterales
EC6.3.2.13
DescriptionCatalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Cds size867
COG categoryM
BRITEko00000,ko00001,ko01000,ko01011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186145.5574856-CDS-P-wetherbeei_contig18424:485..13521683186145.5574856-CDS-P-wetherbeei_contig18424:485..1352Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18424 486..1352 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18424.1.1prot_P-wetherbeei_contig18424.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18424 486..1352 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18424.1.1

>prot_P-wetherbeei_contig18424.1.1 ID=prot_P-wetherbeei_contig18424.1.1|Name=mRNA_P-wetherbeei_contig18424.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=289bp
TLDALTSVLGGQLLQGDLQVAVTGVEYDSRRVQPGQIFVCVPGLTVDGHT
YAQGAVARGAALLVVERPLAEITGVPQIQVRNARRALAKLAAGFSGRPAD
EMTLVGITGTNGKTTTSHFCEAVLKSREKNCGLIGTIQATVGGQAVATAN
TTPESLHLHQLLREMRDCGQDAAVMEVSSHSLELDRVFGMPFDVAVFTNL
THDHLDFHGDMENYFQAKLRLFQGLAYRMDRMAPYAVVNIDDAYGQRIIP
FLKVPYITYGTNPAAHLRATEIEAGIDGVSYTLESPIGD
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mRNA from alignment at P-wetherbeei_contig18424:486..1352+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18424.1.1 ID=mRNA_P-wetherbeei_contig18424.1.1|Name=mRNA_P-wetherbeei_contig18424.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig18424:486..1352+ (Phaeothamnion wetherbeei SAG_119_79)
ACGCTGGATGCACTCACGAGCGTTCTGGGAGGTCAACTCCTCCAGGGCGA TCTACAAGTGGCGGTTACAGGGGTGGAATACGACTCTCGTCGAGTTCAGC CGGGTCAGATTTTTGTCTGCGTCCCCGGGCTCACGGTGGACGGTCACACC TATGCGCAGGGAGCCGTAGCTCGCGGCGCCGCGTTGCTCGTCGTGGAACG GCCGCTGGCCGAAATCACCGGCGTGCCTCAGATACAGGTGCGCAACGCTC GCAGAGCTCTGGCCAAGCTGGCCGCTGGCTTCAGCGGTCGCCCGGCGGAT GAGATGACCCTGGTGGGCATAACGGGCACGAACGGCAAGACGACGACCTC GCACTTTTGCGAAGCCGTGCTCAAGAGCCGCGAGAAGAACTGCGGACTCA TCGGCACGATTCAAGCCACGGTCGGCGGCCAGGCGGTTGCCACGGCCAAT ACGACGCCCGAATCTTTGCATCTGCACCAGTTGCTGCGCGAGATGCGCGA CTGCGGTCAGGATGCTGCGGTGATGGAGGTCTCGTCTCACTCGCTCGAGC TCGACCGAGTTTTCGGGATGCCCTTCGATGTGGCCGTCTTCACCAATTTA ACGCACGATCACCTCGATTTTCATGGCGATATGGAGAACTATTTCCAGGC CAAGCTGCGTCTCTTCCAGGGCCTTGCCTACCGGATGGACCGCATGGCTC CCTACGCCGTCGTCAACATCGACGATGCCTACGGGCAGCGCATTATTCCG TTTCTGAAAGTTCCCTACATCACGTATGGAACCAATCCCGCCGCTCATCT ACGGGCTACCGAAATTGAAGCCGGTATCGACGGCGTGTCCTACACGCTGG AATCCCCCATCGGAGAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18424:486..1352+

>mRNA_P-wetherbeei_contig18424.1.1 ID=mRNA_P-wetherbeei_contig18424.1.1|Name=mRNA_P-wetherbeei_contig18424.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig18424:486..1352+ (Phaeothamnion wetherbeei SAG_119_79)
ACGCTGGATGCACTCACGAGCGTTCTGGGAGGTCAACTCCTCCAGGGCGA
TCTACAAGTGGCGGTTACAGGGGTGGAATACGACTCTCGTCGAGTTCAGC
CGGGTCAGATTTTTGTCTGCGTCCCCGGGCTCACGGTGGACGGTCACACC
TATGCGCAGGGAGCCGTAGCTCGCGGCGCCGCGTTGCTCGTCGTGGAACG
GCCGCTGGCCGAAATCACCGGCGTGCCTCAGATACAGGTGCGCAACGCTC
GCAGAGCTCTGGCCAAGCTGGCCGCTGGCTTCAGCGGTCGCCCGGCGGAT
GAGATGACCCTGGTGGGCATAACGGGCACGAACGGCAAGACGACGACCTC
GCACTTTTGCGAAGCCGTGCTCAAGAGCCGCGAGAAGAACTGCGGACTCA
TCGGCACGATTCAAGCCACGGTCGGCGGCCAGGCGGTTGCCACGGCCAAT
ACGACGCCCGAATCTTTGCATCTGCACCAGTTGCTGCGCGAGATGCGCGA
CTGCGGTCAGGATGCTGCGGTGATGGAGGTCTCGTCTCACTCGCTCGAGC
TCGACCGAGTTTTCGGGATGCCCTTCGATGTGGCCGTCTTCACCAATTTA
ACGCACGATCACCTCGATTTTCATGGCGATATGGAGAACTATTTCCAGGC
CAAGCTGCGTCTCTTCCAGGGCCTTGCCTACCGGATGGACCGCATGGCTC
CCTACGCCGTCGTCAACATCGACGATGCCTACGGGCAGCGCATTATTCCG
TTTCTGAAAGTTCCCTACATCACGTATGGAACCAATCCCGCCGCTCATCT
ACGGGCTACCGAAATTGAAGCCGGTATCGACGGCGTGTCCTACACGCTGG
AATCCCCCATCGGAGAT
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