mRNA_P-wetherbeei_contig18417.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18417.1.1 vs. uniprot
Match: A0A3C2B4Z6_9ACTN (Helicase ATP-binding domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B4Z6_9ACTN) HSP 1 Score: 413 bits (1062), Expect = 1.860e-140 Identity = 191/227 (84.14%), Postives = 215/227 (94.71%), Query Frame = 1
Query: 4 VSDRVHLRPWQRDAFEKFAASERPDFLAVATPGAGKTTFALACARWSLAQQRRRLIVVAPTSHLKQQWARAAHMLGLELDPNWSPADGLAPDVHGLVTTYQQVATADTAKKLRAVANDAVVILDEVHHAGDERAWGDSVKTAFELAHRRLCLSGTPFRSDTAAIPFVEYAETAEGGEAQPDFTYGYADALRDGGVVRPVYFPRFDGVMEWSAPDGSIVSANFHDELD 684
+SDRV LRPWQR+AF+KF ASE+PDFLAVATPGAGKTTFALACARW+L+Q+ RRLI+VAPT+HLK QW +AAH +GLE+DPNWSPADGLAPDVHGLVTTYQQV+TADTAKKLR +A DA V+LDEVHHAGDERAWGD V+TAFELA+RRLCLSGTPFRSDTA+IPFV YAET +GGEAQPDFTYGYADALRDGGVVRPVYFPRFDG+MEWSAPDG++++ANFHDELD
Sbjct: 1 MSDRVQLRPWQREAFDKFTASEQPDFLAVATPGAGKTTFALACARWALSQEPRRLIIVAPTTHLKVQWTQAAHRMGLEVDPNWSPADGLAPDVHGLVTTYQQVSTADTAKKLRGLARDAFVVLDEVHHAGDERAWGDGVRTAFELANRRLCLSGTPFRSDTASIPFVNYAETGQGGEAQPDFTYGYADALRDGGVVRPVYFPRFDGLMEWSAPDGTVLTANFHDELD 227
BLAST of mRNA_P-wetherbeei_contig18417.1.1 vs. uniprot
Match: A0A6I3EYA4_9ACTN (DEAD/DEAH box helicase n=2 Tax=root TaxID=1 RepID=A0A6I3EYA4_9ACTN) HSP 1 Score: 396 bits (1018), Expect = 6.580e-134 Identity = 188/227 (82.82%), Postives = 207/227 (91.19%), Query Frame = 1
Query: 4 VSDRVHLRPWQRDAFEKFAASERPDFLAVATPGAGKTTFALACARWSLAQQRRRLIVVAPTSHLKQQWARAAHMLGLELDPNWSPADGLAPDVHGLVTTYQQVATADTAKKLRAVANDAVVILDEVHHAGDERAWGDSVKTAFELAHRRLCLSGTPFRSDTAAIPFVEYAETAEGGEAQPDFTYGYADALRDGGVVRPVYFPRFDGVMEWSAPDGSIVSANFHDELD 684
+S+RV LRPWQR AF+KFAASE D+LAVATPGAGKTTFALACARW LAQQRRR+IVVAPT+HLK QW +AAH +GLELD WSPADG++ DVHG+VTTYQQV+ DTAKKLR +ANDA VILDE+HHAGDERAWGD V+TAFELA+RRLCLSGTPFRSDTA+IPFV Y ET GGEAQPDFTYGYADALRDGGVVRPVYFPRFDG+MEWSAPDGSI+SANFHDELD
Sbjct: 1 MSERVQLRPWQRAAFDKFAASEYQDYLAVATPGAGKTTFALACARWVLAQQRRRVIVVAPTTHLKTQWVQAAHHMGLELDHQWSPADGMSKDVHGIVTTYQQVSMPDTAKKLRGLANDAFVILDEIHHAGDERAWGDGVRTAFELANRRLCLSGTPFRSDTASIPFVRYEETGVGGEAQPDFTYGYADALRDGGVVRPVYFPRFDGLMEWSAPDGSILSANFHDELD 227
BLAST of mRNA_P-wetherbeei_contig18417.1.1 vs. uniprot
Match: A0A539DUJ5_9ACTN (Helicase ATP-binding domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DUJ5_9ACTN) HSP 1 Score: 365 bits (937), Expect = 2.770e-121 Identity = 174/222 (78.38%), Postives = 191/222 (86.04%), Query Frame = 1
Query: 16 VHLRPWQRDAFEKFAASERPDFLAVATPGAGKTTFALACARWSLAQQRRRLIVVAPTSHLKQQWARAAHMLGLELDPNWSPADGLAPDVHGLVTTYQQVATADTAKKLRAVANDAVVILDEVHHAGDERAWGDSVKTAFELAHRRLCLSGTPFRSDTAAIPFVEYAETAEGGEAQPDFTYGYADALRDGGVVRPVYFPRFDGVMEWSAPDGSIVSANFHDEL 681
V LRPWQR AF++F E DFLAVATPGAGKTTFAL CARW+L +QRRRL+VVAPTSHLK+QWA AAH LGLELDP+W+P GLA DVHGLVTTYQ VATA TAK LR +A DA VILDE+HHAGDERAWGD++++AF+ AHRRLCLSGTPFRSDTAAIPFVEY EG A +TYGYADALRDGGVVRPVYFPRFDG+MEWSAPDG IVSANFHDEL
Sbjct: 21 VRLRPWQRTAFDQFKVHESADFLAVATPGAGKTTFALTCARWALGRQRRRLVVVAPTSHLKKQWAAAAHNLGLELDPDWTPNGGLAGDVHGLVTTYQHVATASTAKALRGLAADAFVILDEIHHAGDERAWGDAIRSAFDTAHRRLCLSGTPFRSDTAAIPFVEYQAAVEGDSACSHYTYGYADALRDGGVVRPVYFPRFDGLMEWSAPDGRIVSANFHDEL 242
BLAST of mRNA_P-wetherbeei_contig18417.1.1 vs. uniprot
Match: A0A7K1B6T3_9ACTN (ATP-dependent helicase n=2 Tax=root TaxID=1 RepID=A0A7K1B6T3_9ACTN) HSP 1 Score: 367 bits (941), Expect = 1.350e-120 Identity = 174/222 (78.38%), Postives = 191/222 (86.04%), Query Frame = 1
Query: 16 VHLRPWQRDAFEKFAASERPDFLAVATPGAGKTTFALACARWSLAQQRRRLIVVAPTSHLKQQWARAAHMLGLELDPNWSPADGLAPDVHGLVTTYQQVATADTAKKLRAVANDAVVILDEVHHAGDERAWGDSVKTAFELAHRRLCLSGTPFRSDTAAIPFVEYAETAEGGEAQPDFTYGYADALRDGGVVRPVYFPRFDGVMEWSAPDGSIVSANFHDEL 681
V LRPWQR AF++F + PD+LAVATPGAGKTTFAL CARW+L Q+RRRLIVVAPTSHLK QWA AAH LGLELDP+W+P GLA DVHGLVTTYQ +ATA TAK LR +A DA VILDE+HHAGDERAWGDSV+ AF AHRRLCLSGTPFRSDT IPFV+Y TAEG A+ +TYGYADALRDGGVVRPVYFPRFDGVMEWSAPDGS++SANFHDEL
Sbjct: 123 VRLRPWQRAAFDRFVTHDSPDYLAVATPGAGKTTFALTCARWALGQERRRLIVVAPTSHLKTQWALAAHRLGLELDPDWTPQGGLARDVHGLVTTYQHLATAGTAKVLRGIATDAFVILDEIHHAGDERAWGDSVRLAFGTAHRRLCLSGTPFRSDTNPIPFVDYETTAEGETARSHYTYGYADALRDGGVVRPVYFPRFDGVMEWSAPDGSVISANFHDEL 344
BLAST of mRNA_P-wetherbeei_contig18417.1.1 vs. uniprot
Match: A0A6I3WIZ3_9ACTN (ATP-dependent helicase n=2 Tax=root TaxID=1 RepID=A0A6I3WIZ3_9ACTN) HSP 1 Score: 330 bits (845), Expect = 1.070e-107 Identity = 159/225 (70.67%), Postives = 187/225 (83.11%), Query Frame = 1
Query: 16 VHLRPWQRDAFEKFAA--SERPDFLAVATPGAGKTTFALACARWSLAQQRRRLIVVAPTSHLKQQWARAAHMLGLELDPNWSPADGLAPDVHGLVTTYQQVATADTAKKLRAVANDAVVILDEVHHAGDERAWGDSVKTAFELAHRRLCLSGTPFRSDTAAIPFVEYAETAEGGEAQPDFTYGYADALRDGGVVRPVYFPRFDGVMEWSAPDGSIVSANFHDELD 684
V LRPWQR AF+KF A + +FLAVATPGAGKTTFAL CARW+L Q+RRRL+VVAPTSHLK QW+ AAH LGL+LDP W+P G+A DVHG+VTT+QQVAT DTA L+ VA++A VILDE+HHAGDE+AWGD+V+ AF A+RRLCLSGTPFRSDTA+IPFV Y + G+A D+ YGY DALRDGGVVRPVYFPR DG MEWSAPDG+++SA+F DELD
Sbjct: 4 VRLRPWQRAAFDKFTALGDDDTNFLAVATPGAGKTTFALTCARWALGQERRRLVVVAPTSHLKVQWSLAAHRLGLQLDPEWTPGSGVAKDVHGIVTTFQQVATGDTANILKGVAHNAFVILDELHHAGDEKAWGDAVRLAFSGAYRRLCLSGTPFRSDTASIPFVRYDD----GQAFADYEYGYGDALRDGGVVRPVYFPRVDGNMEWSAPDGAVLSASFQDELD 224
BLAST of mRNA_P-wetherbeei_contig18417.1.1 vs. uniprot
Match: A0A6N2DEF0_9ACTN (DEAD/DEAH box helicase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DEF0_9ACTN) HSP 1 Score: 317 bits (812), Expect = 1.610e-102 Identity = 159/227 (70.04%), Postives = 175/227 (77.09%), Query Frame = 1
Query: 16 VHLRPWQRDAFEKFAASERPDFLAVATPGAGKTTFALACARWSLAQQRRR-----LIVVAPTSHLKQQWARAAHMLGLELDPNWSPADGLAPDVHGLVTTYQQVATADTAKKLRAVANDAVVILDEVHHAGDERAWGDSVKTAFELAHRRLCLSGTPFRSDTAAIPFVEYAETAEGGEAQPDFTYGYADALRDGGVVRPVYFPRFDGVMEWSAPDGSIVSANFHDEL 681
V LRPWQ+ AF++F AS DFLAVATPGAGKTTFAL CAR L + R L+VVAPTSHLK QW+ AAH +GL+LDP+WSP GLA DVHGLVTTYQQ+AT D A KLR + D VVILDE+HHAG ERAWGD VK AFELA RRL LSGTPFRSD A IPFV Y TAEG A D+TYGY +ALRDGGVVRPVYFPRFDG MEWS P G I+ A+F DEL
Sbjct: 4 VTLRPWQKTAFDRFIASASADFLAVATPGAGKTTFALTCARAVLTSEPRPAVPKPLVVVAPTSHLKVQWSLAAHRMGLQLDPDWSPTVGLARDVHGLVTTYQQLATGDAAAKLRGLVADGVVILDEIHHAGHERAWGDGVKQAFELAARRLALSGTPFRSDAAQIPFVRYDVTAEGDLAYADYTYGYGEALRDGGVVRPVYFPRFDGQMEWSTPSGQILRASFSDEL 230
BLAST of mRNA_P-wetherbeei_contig18417.1.1 vs. uniprot
Match: A0A2E3TU59_9ACTN (Helicase ATP-binding domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A2E3TU59_9ACTN) HSP 1 Score: 315 bits (808), Expect = 5.030e-102 Identity = 153/222 (68.92%), Postives = 175/222 (78.83%), Query Frame = 1
Query: 16 VHLRPWQRDAFEKFAASERPDFLAVATPGAGKTTFALACARWSLAQQRRRLIVVAPTSHLKQQWARAAHMLGLELDPNWSPADGLAPDVHGLVTTYQQVATADTAKKLRAVANDAVVILDEVHHAGDERAWGDSVKTAFELAHRRLCLSGTPFRSDTAAIPFVEYAETAEGGEAQPDFTYGYADALRDGGVVRPVYFPRFDGVMEWSAPDGSIVSANFHDEL 681
V+LRPWQR AF F + PD+LAVATPGAGKTTFALACAR LA + R LIVVAPTSHLK QW+RAAH +GL+LDP+WSP +GLA DVHGLVTTYQQ+A AKKL ++ + VILDE+HHAG E+AWGD V+ +F AH+RL LSGTPFRSD A IPFV Y TAEG A D+TYGYA+ALRDGGVVRPVYFPR DG MEW++ G VSANF DEL
Sbjct: 4 VNLRPWQRSAFNLFRKTAGPDYLAVATPGAGKTTFALACARAELADENRPLIVVAPTSHLKIQWSRAAHRMGLQLDPDWSPGEGLARDVHGLVTTYQQLAIGHAAKKLAGISAEGFVILDEIHHAGYEKAWGDGVRKSFGHAHKRLSLSGTPFRSDAAQIPFVRYDNTAEGELAHADYTYGYAEALRDGGVVRPVYFPRVDGEMEWTSATGDTVSANFQDEL 225
BLAST of mRNA_P-wetherbeei_contig18417.1.1 vs. uniprot
Match: A0A2E0RN33_9ACTN (Helicase ATP-binding domain-containing protein n=3 Tax=Acidimicrobiales TaxID=84993 RepID=A0A2E0RN33_9ACTN) HSP 1 Score: 317 bits (811), Expect = 1.130e-101 Identity = 155/227 (68.28%), Postives = 174/227 (76.65%), Query Frame = 1
Query: 16 VHLRPWQRDAFEKFAASERPDFLAVATPGAGKTTFALACAR-----WSLAQQRRRLIVVAPTSHLKQQWARAAHMLGLELDPNWSPADGLAPDVHGLVTTYQQVATADTAKKLRAVANDAVVILDEVHHAGDERAWGDSVKTAFELAHRRLCLSGTPFRSDTAAIPFVEYAETAEGGEAQPDFTYGYADALRDGGVVRPVYFPRFDGVMEWSAPDGSIVSANFHDEL 681
+ LRPWQR AF+ F ASE PDFLAVATPGAGKTTFAL CAR W+ RRL+VVAPTSHLK QWA AAH +GL+LDP+WSP GLA D HGLVTTYQQ+AT A KL+ ++ + +V+LDEVHHAG ERAWGD + AF A RRL LSGTPFRSD A IP+V Y TAEG +A DFTYGYADALRDGGVVRPVYFPR DG MEWS P G ++ A FHDEL
Sbjct: 85 ITLRPWQRAAFDLFDASEHPDFLAVATPGAGKTTFALTCARSQLSKWAADGTARRLVVVAPTSHLKLQWALAAHRMGLQLDPDWSPDYGLARDTHGLVTTYQQIATGAAADKLQGLSAEGMVVLDEVHHAGHERAWGDGIGRAFAHAERRLSLSGTPFRSDAARIPYVRYDVTAEGDQAHADFTYGYADALRDGGVVRPVYFPRVDGQMEWSTPSGDVLRATFHDEL 311
BLAST of mRNA_P-wetherbeei_contig18417.1.1 vs. uniprot
Match: A0A6C7E9H7_ILUCY (Helicase ATP-binding domain-containing protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E9H7_ILUCY) HSP 1 Score: 315 bits (806), Expect = 1.820e-101 Identity = 158/237 (66.67%), Postives = 176/237 (74.26%), Query Frame = 1
Query: 16 VHLRPWQRDAFEKF---------------AASERPDFLAVATPGAGKTTFALACARWSLAQQRRRLIVVAPTSHLKQQWARAAHMLGLELDPNWSPADGLAPDVHGLVTTYQQVATADTAKKLRAVANDAVVILDEVHHAGDERAWGDSVKTAFELAHRRLCLSGTPFRSDTAAIPFVEYAETAEGGEAQPDFTYGYADALRDGGVVRPVYFPRFDGVMEWSAPDGSIVSANFHDEL 681
+ LRPWQR AF+ F +A PDFLAVATPGAGKTTFAL CAR LA++ R L++VAPTSHLK QWA+AAH LGLE+DP WSP DGLA DVHGLVTTYQQ+AT AKKL +A+D VILDEVHHAG ERAWGD ++ AF A+RRL LSGTPFRSD A IPFV Y T EG A DFTYGYADALRDGGVVRPVYFPR DG MEW+ G ++SANF DEL
Sbjct: 4 ITLRPWQRAAFDLFMNGARAGGDAVRPDGSAEVAPDFLAVATPGAGKTTFALTCARAVLAEKNRPLVIVAPTSHLKIQWAQAAHRLGLEVDPFWSPNDGLAKDVHGLVTTYQQIATGTAAKKLAGLAHDGFVILDEVHHAGTERAWGDGIRKAFAPAYRRLSLSGTPFRSDAAQIPFVRYDATGEGDLAHADFTYGYADALRDGGVVRPVYFPRVDGEMEWTTASGDVMSANFQDEL 240
BLAST of mRNA_P-wetherbeei_contig18417.1.1 vs. uniprot
Match: A0A662DMS0_9ACTN (ATP-dependent helicase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A662DMS0_9ACTN) HSP 1 Score: 312 bits (799), Expect = 5.530e-101 Identity = 153/222 (68.92%), Postives = 174/222 (78.38%), Query Frame = 1
Query: 16 VHLRPWQRDAFEKFAASERPDFLAVATPGAGKTTFALACARWSLAQQRRRLIVVAPTSHLKQQWARAAHMLGLELDPNWSPADGLAPDVHGLVTTYQQVATADTAKKLRAVANDAVVILDEVHHAGDERAWGDSVKTAFELAHRRLCLSGTPFRSDTAAIPFVEYAETAEGGEAQPDFTYGYADALRDGGVVRPVYFPRFDGVMEWSAPDGSIVSANFHDEL 681
V LRPWQR AF++F +S+ D+LAVATPGAGKTTFAL CAR SL +Q R LIVVAPTSHLK QW+ AAH LGL+LDP+WSP GLA DVHGLVTTYQQ+AT +TA KL ++ VILDE+HHAG ERAWGDS++ AF A RRL LSGTPFRSD+ IPFV Y AEG A D+TYGYADALRDGGVVRPVYFPR DG MEW+ G + +ANF DEL
Sbjct: 4 VTLRPWQRAAFDQFQSSDDADYLAVATPGAGKTTFALVCARASLVEQPRTLIVVAPTSHLKVQWSLAAHRLGLQLDPDWSPDAGLARDVHGLVTTYQQIATGNTATKLAGLSAGGFVILDEIHHAGHERAWGDSIRVAFGHADRRLSLSGTPFRSDSVQIPFVRYDTVAEGELAHADYTYGYADALRDGGVVRPVYFPRVDGEMEWTTASGDVFNANFQDEL 225 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18417.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18417.1.1 >prot_P-wetherbeei_contig18417.1.1 ID=prot_P-wetherbeei_contig18417.1.1|Name=mRNA_P-wetherbeei_contig18417.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=228bp PVSDRVHLRPWQRDAFEKFAASERPDFLAVATPGAGKTTFALACARWSLAback to top mRNA from alignment at P-wetherbeei_contig18417:2..685- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18417.1.1 ID=mRNA_P-wetherbeei_contig18417.1.1|Name=mRNA_P-wetherbeei_contig18417.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=684bp|location=Sequence derived from alignment at P-wetherbeei_contig18417:2..685- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18417:2..685- >mRNA_P-wetherbeei_contig18417.1.1 ID=mRNA_P-wetherbeei_contig18417.1.1|Name=mRNA_P-wetherbeei_contig18417.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=684bp|location=Sequence derived from alignment at P-wetherbeei_contig18417:2..685- (Phaeothamnion wetherbeei SAG_119_79)back to top |