mRNA_P-wetherbeei_contig18414.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18414.1.1
Unique NamemRNA_P-wetherbeei_contig18414.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig18414.1.1 vs. uniprot
Match: A0A6L5FNM7_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FNM7_9HYPH)

HSP 1 Score: 69.3 bits (168), Expect = 1.030e-9
Identity = 29/39 (74.36%), Postives = 32/39 (82.05%), Query Frame = 1 
Query:   25 LFDTNWYLERNPDVAAAHADPIEHYIKHGAWEGRDPHPL 141
            LFD  WYL+R PDVAAA  DP+ HYI+ GAWEGRDPHPL
Sbjct:  472 LFDGEWYLKRYPDVAAAGYDPLFHYIRFGAWEGRDPHPL 510
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BLAST of mRNA_P-wetherbeei_contig18414.1.1 vs. uniprot
Match: A0A060C7I8_9CYAN (CAZy families GT2|GT4 protein (Fragment) n=1 Tax=uncultured Cyanothece sp. TaxID=259951 RepID=A0A060C7I8_9CYAN)

HSP 1 Score: 64.3 bits (155), Expect = 1.840e-9
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 1 
Query:   25 LFDTNWYLERNPDVAAAHADPIEHYIKHGAWEGRDPHPL 141
            LFD  WYL+R PDVA    DP+ HY++ GAWEGR+PHPL
Sbjct:   20 LFDDGWYLKRYPDVANRGMDPLRHYLRFGAWEGRNPHPL 58
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BLAST of mRNA_P-wetherbeei_contig18414.1.1 vs. uniprot
Match: A0A442B8J2_9HYPH (Glycosyltransferase n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A442B8J2_9HYPH)

HSP 1 Score: 64.3 bits (155), Expect = 4.890e-8
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:   25 LFDTNWYLERNPDVAAAHADPIEHYIKHGAWEGRDPHPL 141
            LFD  WY +RNPDV AA  DP  HY++HGA+EGRDP P 
Sbjct:  481 LFDEEWYRQRNPDVVAAGVDPASHYLRHGAYEGRDPSPF 519
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BLAST of mRNA_P-wetherbeei_contig18414.1.1 vs. uniprot
Match: A0A503B598_9HYPH (Glycosyltransferase n=1 Tax=Mesorhizobium sp. B2-6-2 TaxID=2589915 RepID=A0A503B598_9HYPH)

HSP 1 Score: 64.3 bits (155), Expect = 4.900e-8
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 1 
Query:   25 LFDTNWYLERNPDVAAAHADPIEHYIKHGAWEGRDPHPL 141
            LFD  WY +RNPDVA A  DP  HY++HGA+EGRDP P 
Sbjct:  495 LFDEEWYRQRNPDVATAGVDPASHYLRHGAYEGRDPSPF 533
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BLAST of mRNA_P-wetherbeei_contig18414.1.1 vs. uniprot
Match: UPI000975814B (glycosyltransferase n=1 Tax=Methylobacterium radiotolerans TaxID=31998 RepID=UPI000975814B)

HSP 1 Score: 63.9 bits (154), Expect = 7.410e-8
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 1 
Query:   25 LFDTNWYLERNPDVAAAHADPIEHYIKHGAWEGRDPHP 138
            LFD  WYL RNPDVA+A  DP+EHY  +GA EGRDPHP
Sbjct:   26 LFDEPWYLARNPDVASAGLDPLEHYFVNGAAEGRDPHP 63
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BLAST of mRNA_P-wetherbeei_contig18414.1.1 vs. uniprot
Match: X7F4K6_9RHOB (Uncharacterized protein n=1 Tax=Roseivivax isoporae LMG 25204 TaxID=1449351 RepID=X7F4K6_9RHOB)

HSP 1 Score: 60.8 bits (146), Expect = 9.650e-8
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 1 
Query:   25 LFDTNWYLERNPDVAAAHADPIEHYIKHGAWEGRDPHP 138
            LFD  WYLE+N DVA A  DPI+HYI+ GA+EGRDP P
Sbjct:  103 LFDIRWYLEQNRDVAEAGMDPIDHYIRSGAFEGRDPGP 140
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BLAST of mRNA_P-wetherbeei_contig18414.1.1 vs. uniprot
Match: A0A2V5UI79_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5UI79_9BACT)

HSP 1 Score: 61.2 bits (147), Expect = 1.990e-7
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:   16 YGLLFDTNWYLERNPDVAAAHADPIEHYIKHGAWEGRDPH 135
            +  LFDT+WYLE NP+V  A  DP++HYI++GA EGR+PH
Sbjct:   94 FSPLFDTDWYLENNPEVNRAGMDPLQHYIRYGAREGRNPH 133
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BLAST of mRNA_P-wetherbeei_contig18414.1.1 vs. uniprot
Match: A0A2V9G8S8_9BACT (Glyco_trans_2-like domain-containing protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9G8S8_9BACT)

HSP 1 Score: 62.4 bits (150), Expect = 2.150e-7
Identity = 24/39 (61.54%), Postives = 33/39 (84.62%), Query Frame = 1 
Query:   25 LFDTNWYLERNPDVAAAHADPIEHYIKHGAWEGRDPHPL 141
            LFD++WYL++NPDVA A  +P+ HY++ GA EGRDP+PL
Sbjct:  172 LFDSDWYLQQNPDVARAGVNPLRHYLRRGAIEGRDPNPL 210
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BLAST of mRNA_P-wetherbeei_contig18414.1.1 vs. uniprot
Match: UPI001A8D00AD (hypothetical protein n=1 Tax=Methylacidiphilum sp. IT6 TaxID=2795386 RepID=UPI001A8D00AD)

HSP 1 Score: 62.0 bits (149), Expect = 2.820e-7
Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 1 
Query:   22 LLFDTNWYLERNPDVAAAHADPIEHYIKHGAWEGRDPHP 138
            LLFD+++YLE+NPDV AA  DP++HYI+HG  EGR P P
Sbjct:  767 LLFDSHYYLEKNPDVLAAGVDPLQHYIEHGGREGRSPSP 805
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BLAST of mRNA_P-wetherbeei_contig18414.1.1 vs. uniprot
Match: A0A7Y8SJX5_9ALTE (Uncharacterized protein n=1 Tax=Alteromonadaceae bacterium TaxID=1916082 RepID=A0A7Y8SJX5_9ALTE)

HSP 1 Score: 61.2 bits (147), Expect = 3.890e-7
Identity = 27/36 (75.00%), Postives = 29/36 (80.56%), Query Frame = 1 
Query:   25 LFDTNWYLERNPDVAAAHADPIEHYIKHGAWEGRDP 132
            LFDTNWYLE  PDVA A  DPIEHY+K GA EGR+P
Sbjct:  341 LFDTNWYLETYPDVAEAGMDPIEHYLKLGALEGRNP 376
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18414.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L5FNM7_9HYPH1.030e-974.36Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A060C7I8_9CYAN1.840e-964.10CAZy families GT2|GT4 protein (Fragment) n=1 Tax=u... [more]
A0A442B8J2_9HYPH4.890e-864.10Glycosyltransferase n=1 Tax=Mesorhizobium sp. TaxI... [more]
A0A503B598_9HYPH4.900e-864.10Glycosyltransferase n=1 Tax=Mesorhizobium sp. B2-6... [more]
UPI000975814B7.410e-871.05glycosyltransferase n=1 Tax=Methylobacterium radio... [more]
X7F4K6_9RHOB9.650e-868.42Uncharacterized protein n=1 Tax=Roseivivax isopora... [more]
A0A2V5UI79_9BACT1.990e-760.00Uncharacterized protein (Fragment) n=1 Tax=Verruco... [more]
A0A2V9G8S8_9BACT2.150e-761.54Glyco_trans_2-like domain-containing protein (Frag... [more]
UPI001A8D00AD2.820e-764.10hypothetical protein n=1 Tax=Methylacidiphilum sp.... [more]
A0A7Y8SJX5_9ALTE3.890e-775.00Uncharacterized protein n=1 Tax=Alteromonadaceae b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18414contigP-wetherbeei_contig18414:326..1105 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1449351.RISW2_17140
PFAMsBcsB,Glyco_trans_1_4,Glyco_trans_2_3,Glyco_transf_4,Glyco_transf_41,Glycos_transf_1,Glycos_transf_2,Methyltransf_11,Methyltransf_23
Model size780
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.58e-08
EggNOG OGsCOG1215@1|root,COG1215@2|Bacteria
Descriptiontransferase activity, transferring glycosyl groups
Cds size780
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186145.31628-CDS-P-wetherbeei_contig18414:325..11051683186145.31628-CDS-P-wetherbeei_contig18414:325..1105Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18414 326..1105 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18414.1.1prot_P-wetherbeei_contig18414.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18414 326..1105 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18414.1.1

>prot_P-wetherbeei_contig18414.1.1 ID=prot_P-wetherbeei_contig18414.1.1|Name=mRNA_P-wetherbeei_contig18414.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=260bp
MNERHYGLLFDTNWYLERNPDVAAAHADPIEHYIKHGAWEGRDPHPLFDT
DWYLSRNPDIAANVNPLIHFLQKGGRQGRDPHPLFNSGWYLEKNPDVAVG
AINPLLHYLNQGAMQGRDPHPLFDSDWYLERNPDVAANAANPLRHYLEYG
AREGRDPHPLFDSDWYLKKYPDVAAGTVNPLQHYVEHGANEGRDPHPLFN
TDWYKHHQINPSSKANPLVHYITVGGHAGLDPSPSFDTAWYRSQFKPHVS
AEGNALLQYL
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mRNA from alignment at P-wetherbeei_contig18414:326..1105-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18414.1.1 ID=mRNA_P-wetherbeei_contig18414.1.1|Name=mRNA_P-wetherbeei_contig18414.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig18414:326..1105- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGAAAGGCATTATGGTCTGCTGTTCGATACCAATTGGTATCTTGA
ACGGAATCCGGACGTAGCCGCGGCCCACGCCGATCCGATAGAGCACTATA
TCAAACACGGCGCCTGGGAAGGACGCGACCCTCACCCACTGTTCGACACC
GATTGGTATTTAAGCCGCAATCCCGACATTGCGGCAAACGTCAATCCATT
GATTCACTTCCTTCAAAAGGGCGGTCGGCAGGGACGAGATCCTCACCCGC
TTTTCAACAGCGGCTGGTATCTTGAGAAGAATCCGGACGTTGCTGTGGGC
GCAATCAATCCACTGCTGCACTACCTCAATCAGGGGGCCATGCAGGGGCG
CGACCCGCATCCCCTCTTCGATAGCGATTGGTATCTTGAGCGGAACCCCG
ATGTGGCGGCGAACGCAGCCAATCCGCTAAGACACTACTTGGAATACGGC
GCGAGAGAGGGTCGCGATCCCCACCCCCTGTTCGATTCCGATTGGTATCT
CAAGAAATACCCCGACGTGGCGGCGGGCACCGTCAATCCTCTTCAGCATT
ATGTTGAACACGGCGCCAATGAAGGGCGCGATCCTCATCCGCTGTTCAAT
ACCGATTGGTACAAGCACCATCAGATCAATCCGTCATCTAAAGCCAACCC
ATTGGTTCACTACATCACGGTTGGCGGCCATGCCGGTCTAGACCCGAGTC
CCTCGTTCGATACCGCATGGTATCGCAGCCAATTCAAGCCCCACGTATCG
GCGGAGGGCAATGCGCTACTGCAGTATCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18414:326..1105-

>mRNA_P-wetherbeei_contig18414.1.1 ID=mRNA_P-wetherbeei_contig18414.1.1|Name=mRNA_P-wetherbeei_contig18414.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig18414:326..1105- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGAAAGGCATTATGGTCTGCTGTTCGATACCAATTGGTATCTTGA
ACGGAATCCGGACGTAGCCGCGGCCCACGCCGATCCGATAGAGCACTATA
TCAAACACGGCGCCTGGGAAGGACGCGACCCTCACCCACTGTTCGACACC
GATTGGTATTTAAGCCGCAATCCCGACATTGCGGCAAACGTCAATCCATT
GATTCACTTCCTTCAAAAGGGCGGTCGGCAGGGACGAGATCCTCACCCGC
TTTTCAACAGCGGCTGGTATCTTGAGAAGAATCCGGACGTTGCTGTGGGC
GCAATCAATCCACTGCTGCACTACCTCAATCAGGGGGCCATGCAGGGGCG
CGACCCGCATCCCCTCTTCGATAGCGATTGGTATCTTGAGCGGAACCCCG
ATGTGGCGGCGAACGCAGCCAATCCGCTAAGACACTACTTGGAATACGGC
GCGAGAGAGGGTCGCGATCCCCACCCCCTGTTCGATTCCGATTGGTATCT
CAAGAAATACCCCGACGTGGCGGCGGGCACCGTCAATCCTCTTCAGCATT
ATGTTGAACACGGCGCCAATGAAGGGCGCGATCCTCATCCGCTGTTCAAT
ACCGATTGGTACAAGCACCATCAGATCAATCCGTCATCTAAAGCCAACCC
ATTGGTTCACTACATCACGGTTGGCGGCCATGCCGGTCTAGACCCGAGTC
CCTCGTTCGATACCGCATGGTATCGCAGCCAATTCAAGCCCCACGTATCG
GCGGAGGGCAATGCGCTACTGCAGTATCTG
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