mRNA_P-wetherbeei_contig1841.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1841.1.1
Unique NamemRNA_P-wetherbeei_contig1841.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1841.1.1 vs. uniprot
Match: L1I5G5_GUITC (Protein kinase domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I5G5_GUITC)

HSP 1 Score: 65.9 bits (159), Expect = 6.480e-11
Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1
Query:   28 GICVGIFGFFGLTGIAWIGYKRREADKLWRIPEDAIVWPEPTQILGKGTYGIVLAGNFRGVAVAVKQ 228
            G  + IF F G T   +IG KR+++D LW +  D + + EP ++LG+GT+GIVL   +RG  VAVK+
Sbjct:    8 GAAILIFIFLGWT---YIGIKRKQSDSLWEVRRDELKFAEPIEVLGRGTFGIVLKAEYRGTNVAVKR 71          
BLAST of mRNA_P-wetherbeei_contig1841.1.1 vs. uniprot
Match: A0A7S1DRH0_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DRH0_HEMAN)

HSP 1 Score: 63.2 bits (152), Expect = 8.190e-10
Identity = 24/67 (35.82%), Postives = 43/67 (64.18%), Query Frame = 1
Query:   31 ICVGIFGFFGLTGIAWIGYKRREADKLWRIPEDAIVWPEPTQILGKGTYGIVLAGNFRGVAVAVKQA 231
            + + +  FF +    ++ Y+ R+AD LW++    + +  P ++LGKG++G+VL G +RG  VAVK+A
Sbjct:  527 VAIPLMMFFIILSFVYVRYRVRQADMLWKVEGSEVKFKRPPEVLGKGSFGLVLQGTYRGTKVAVKRA 593          
BLAST of mRNA_P-wetherbeei_contig1841.1.1 vs. uniprot
Match: A0A813GQR5_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GQR5_POLGL)

HSP 1 Score: 61.6 bits (148), Expect = 2.790e-9
Identity = 24/48 (50.00%), Postives = 36/48 (75.00%), Query Frame = 1
Query:   85 YKRREADKLWRIPEDAIVWPEPTQILGKGTYGIVLAGNFRGVAVAVKQ 228
            +KR++ D +W I  D +++PEP QILG GT+G+V+   +RG AVAVK+
Sbjct:  229 HKRKQNDAMWHIELDELIFPEPVQILGHGTFGLVVKAEYRGTAVAVKR 276          
BLAST of mRNA_P-wetherbeei_contig1841.1.1 vs. uniprot
Match: A0A7S3PED2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PED2_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.840e-9
Identity = 23/74 (31.08%), Postives = 47/74 (63.51%), Query Frame = 1
Query:   10 STVAIVGICVGIFGFFGLTGIAWIGYKRREADKLWRIPEDAIVWPEPTQILGKGTYGIVLAGNFRGVAVAVKQA 231
            ST+  V I +    F    GI ++ ++  + D++W++  D + + +P +++G+G++G+VL G +RG  VA+K+A
Sbjct:  303 STIMAVVISIASVAFLTCVGICYVRHRNHKNDEMWQVNLDELQFDDPPEVIGQGSFGVVLLGQYRGTKVALKRA 376          
BLAST of mRNA_P-wetherbeei_contig1841.1.1 vs. uniprot
Match: A9VB68_MONBE (Guanylate cyclase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VB68_MONBE)

HSP 1 Score: 60.5 bits (145), Expect = 7.550e-9
Identity = 26/69 (37.68%), Postives = 45/69 (65.22%), Query Frame = 1
Query:   22 IVGICVGIFGFFGLTGIAWIGYKRREADKLWRIPEDAIVWPEPTQILGKGTYGIVLAGNFRGVAVAVKQ 228
            I+ I V +     +   A++ Y++++AD LW I    + + +P ++LG+GT+G+VL G +RG AVAVK+
Sbjct: 1496 IISIAVPVALLLVILITAFVRYQQKKADALWTIDRSELFFDDPPEVLGRGTFGLVLKGTYRGSAVAVKR 1564          
BLAST of mRNA_P-wetherbeei_contig1841.1.1 vs. uniprot
Match: A0A7S3L0D4_9STRA (Guanylate cyclase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L0D4_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.400e-8
Identity = 24/76 (31.58%), Postives = 48/76 (63.16%), Query Frame = 1
Query:    4 ELSTVAIVGICVGIFGFFGLTGIAWIGYKRREADKLWRIPEDAIVWPEPTQILGKGTYGIVLAGNFRGVAVAVKQA 231
            E + +A+V     +    GL G+ W+ +K  + D++W +  D + + +P +++G+G++G+VL G +RG  VA+K+A
Sbjct:  613 ESTIIAVVISVAAVLVVAGL-GVCWLRWKNHKNDQMWLVNIDELQFDDPPEVIGQGSFGVVLLGQYRGTKVALKRA 687          
BLAST of mRNA_P-wetherbeei_contig1841.1.1 vs. uniprot
Match: A0A7S3L1Z0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1Z0_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.510e-8
Identity = 21/74 (28.38%), Postives = 47/74 (63.51%), Query Frame = 1
Query:   10 STVAIVGICVGIFGFFGLTGIAWIGYKRREADKLWRIPEDAIVWPEPTQILGKGTYGIVLAGNFRGVAVAVKQA 231
            ST+  V I +       + G+ ++ Y+  + D++W++  + + + +P +++G+G++G+VL G +RG  VA+K+A
Sbjct:  154 STIMAVVISIAAVILVTILGVCYVRYRNHKNDEMWQVNIEELTFDDPVEVIGQGSFGVVLLGQYRGTKVALKRA 227          
BLAST of mRNA_P-wetherbeei_contig1841.1.1 vs. uniprot
Match: A0A7S1DRG5_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DRG5_HEMAN)

HSP 1 Score: 57.8 bits (138), Expect = 1.760e-8
Identity = 34/86 (39.53%), Postives = 48/86 (55.81%), Query Frame = 1
Query:    4 ELSTVAIVGICVGIFGFFGLT-------GIAWIGY----KRREADKLWRIPEDAIVWPEPTQILGKGTYGIVLAGNFRGVAVAVKQ 228
            E S+V + G CV +  FF L         IA + Y    + R+AD  W IP   +V+  P QILG+GT+G+V+    RG +VAVK+
Sbjct:   82 ESSSVGVFGRCVPMALFFPLAIIPAVALVIATVMYVAALQVRKADAHWNIPASELVFDNPVQILGRGTFGMVVKATLRGTSVAVKR 167          
BLAST of mRNA_P-wetherbeei_contig1841.1.1 vs. uniprot
Match: A0A6U2ACM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2ACM1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.530e-8
Identity = 24/75 (32.00%), Postives = 44/75 (58.67%), Query Frame = 1
Query:   10 STVAIVGICVGIFGFFGLTGIAWIGY--KRREADKLWRIPEDAIVWPEPTQILGKGTYGIVLAGNFRGVAVAVKQ 228
            S V ++ + V +        + WI    KRR  D +W+I +D +++ +P ++ G+GT+G+V+   +RG  VAVK+
Sbjct:  328 SNVILIAVLVPVLSVILAVTVIWIYLERKRRHTDAVWKIAKDELIFKDPPEVAGRGTFGLVVKAEYRGTTVAVKR 402          
BLAST of mRNA_P-wetherbeei_contig1841.1.1 vs. uniprot
Match: A9V2N7_MONBE (Guanylate cyclase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V2N7_MONBE)

HSP 1 Score: 58.2 bits (139), Expect = 4.840e-8
Identity = 23/48 (47.92%), Postives = 36/48 (75.00%), Query Frame = 1
Query:   88 KRREADKLWRIPEDAIVWPEPTQILGKGTYGIVLAGNFRGVAVAVKQA 231
            +RR+AD +W+I  DA+++  P  +LG G++G+VLA  +RG  VAVK+A
Sbjct:  283 QRRKADGIWQIKADALIFDNPPDVLGAGSFGVVLAAKYRGERVAVKRA 330          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1841.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L1I5G5_GUITC6.480e-1144.78Protein kinase domain-containing protein (Fragment... [more]
A0A7S1DRH0_HEMAN8.190e-1035.82Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A813GQR5_POLGL2.790e-950.00Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A7S3PED2_9STRA3.840e-931.08Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A9VB68_MONBE7.550e-937.68Guanylate cyclase n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7S3L0D4_9STRA1.400e-831.58Guanylate cyclase n=1 Tax=Amphora coffeiformis Tax... [more]
A0A7S3L1Z0_9STRA1.510e-828.38Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S1DRG5_HEMAN1.760e-839.53Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A6U2ACM1_9STRA2.530e-832.00Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A9V2N7_MONBE4.840e-847.92Guanylate cyclase n=1 Tax=Monosiga brevicollis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1841contigP-wetherbeei_contig1841:372..608 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog55529.EKX31508
PFAMsPhosphonate-bd,Pkinase_Tyr,TIG
Model size237
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
GOsGO:0000166,GO:0000323,GO:0001845,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004713,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005767,GO:0005773,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006909,GO:0006996,GO:0007033,GO:0007040,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0012506,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018108,GO:0018193,GO:0018212,GO:0019538,GO:0022607,GO:0023052,GO:0030139,GO:0030554,GO:0030659,GO:0030666,GO:0030670,GO:0031090,GO:0031410,GO:0031982,GO:0032010,GO:0032553,GO:0032555,GO:0032559,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045335,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0065007,GO:0070925,GO:0071704,GO:0071840,GO:0080171,GO:0090382,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098657,GO:0098805,GO:0140096,GO:1901265,GO:1901363,GO:1901564
Exons1
Evalue1.06e-11
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
Descriptionprotein kinase activity
Cds size237
COG categoryKLT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186145.1549397-CDS-P-wetherbeei_contig1841:371..6081683186145.1549397-CDS-P-wetherbeei_contig1841:371..608Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1841 372..608 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1841.1.1prot_P-wetherbeei_contig1841.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1841 372..608 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1841.1.1

>prot_P-wetherbeei_contig1841.1.1 ID=prot_P-wetherbeei_contig1841.1.1|Name=mRNA_P-wetherbeei_contig1841.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=79bp
PELSTVAIVGICVGIFGFFGLTGIAWIGYKRREADKLWRIPEDAIVWPEP
TQILGKGTYGIVLAGNFRGVAVAVKQAS*
back to top

mRNA from alignment at P-wetherbeei_contig1841:372..608+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1841.1.1 ID=mRNA_P-wetherbeei_contig1841.1.1|Name=mRNA_P-wetherbeei_contig1841.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=237bp|location=Sequence derived from alignment at P-wetherbeei_contig1841:372..608+ (Phaeothamnion wetherbeei SAG_119_79)
CCGGAACTGAGCACCGTCGCGATTGTCGGTATCTGCGTGGGCATCTTCGG GTTCTTTGGGTTGACAGGCATCGCGTGGATTGGATACAAGCGGCGAGAGG CGGACAAGCTCTGGCGTATCCCTGAAGACGCCATCGTCTGGCCCGAGCCG ACGCAGATCCTGGGGAAAGGAACTTACGGCATCGTGCTGGCGGGAAATTT CAGGGGCGTCGCGGTGGCTGTGAAGCAGGCGAGTTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1841:372..608+

>mRNA_P-wetherbeei_contig1841.1.1 ID=mRNA_P-wetherbeei_contig1841.1.1|Name=mRNA_P-wetherbeei_contig1841.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=237bp|location=Sequence derived from alignment at P-wetherbeei_contig1841:372..608+ (Phaeothamnion wetherbeei SAG_119_79)
CCGGAACTGAGCACCGTCGCGATTGTCGGTATCTGCGTGGGCATCTTCGG
GTTCTTTGGGTTGACAGGCATCGCGTGGATTGGATACAAGCGGCGAGAGG
CGGACAAGCTCTGGCGTATCCCTGAAGACGCCATCGTCTGGCCCGAGCCG
ACGCAGATCCTGGGGAAAGGAACTTACGGCATCGTGCTGGCGGGAAATTT
CAGGGGCGTCGCGGTGGCTGTGAAGCAGGCGAGTTAG
back to top