mRNA_P-wetherbeei_contig18395.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18395.1.1 vs. uniprot
Match: A0A060STY7_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060STY7_PYCCI) HSP 1 Score: 129 bits (325), Expect = 2.320e-33 Identity = 90/221 (40.72%), Postives = 129/221 (58.37%), Query Frame = 1
Query: 1 YRSIIGSLVHAACITRLDVAYPVRCLARYAAASTVTHMMAAKRVLRYLIGTPTPGLLYYRQPAAATATTTPATASAATALELMDYGDAVPAGSLDARTAVARSTTGRLFLRAGGVVAFSSRLQHSAARSTMESEYMALFDAAWEAEELRDLLAHLGLEQTAPTVIREDNTAALAAAMAARHTHQSRHIRIRYHFTRELVAAGVIVVE-VSTADQLADGLTK 660
Y++++GSL++AA T D+A+ V+ L++YA+ H+ AAKRVLRYL GT T G++Y AT + LE + Y DA A LD R ++A G++FL G + +SSR Q + A+S+ME+EYMA+ AA E LR LL LG + PT + DN +A+A+A ++HI I YHF RE +A+ +VV + D LAD LTK
Sbjct: 32 YQAMVGSLMYAALGTHPDIAHAVQQLSQYASNPGPAHITAAKRVLRYLKGTRTLGIIYCAN----------ATTDSDHPLEPLGYSDADWANDLDDRKSIA----GQVFLLGGAPITWSSRKQRTVAKSSMEAEYMAMSAAASEIAWLRALLTELGFPPSGPTPLYVDNQSAIASANVQTSHACTKHIDIHYHFIRERIASNEVVVNHCPSEDNLADALTK 238
BLAST of mRNA_P-wetherbeei_contig18395.1.1 vs. uniprot
Match: A0A060SMR9_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SMR9_PYCCI) HSP 1 Score: 126 bits (317), Expect = 3.090e-32 Identity = 90/221 (40.72%), Postives = 127/221 (57.47%), Query Frame = 1
Query: 1 YRSIIGSLVHAACITRLDVAYPVRCLARYAAASTVTHMMAAKRVLRYLIGTPTPGLLYYRQPAAATATTTPATASAATALELMDYGDAVPAGSLDARTAVARSTTGRLFLRAGGVVAFSSRLQHSAARSTMESEYMALFDAAWEAEELRDLLAHLGLEQTAPTVIREDNTAALAAAMAARHTHQSRHIRIRYHFTRELVAAGVI-VVEVSTADQLADGLTK 660
Y++I+GSL++AA TR D+A+ V+ L++Y++ T H+ AAKRVLRYL GT T G++Y+ L + DA LD R RS +G++FL A G VA+SSR Q + A+S+ME+EYMA A + LR LA LG PT + DN +A+A+A A +++HI I YHF RE +A+ + VV + D LAD LTK
Sbjct: 31 YQAIVGSLMYAALGTRPDIAHAVQQLSQYSSNPTGVHLTAAKRVLRYLKGTRTLGIVYHGD---------------RDVLAPIGCSDADWGNDLDDR----RSISGQIFLMANGPVAWSSRKQRTVAKSSMEAEYMAASLATSDIAWLRTFLAELGFPIDGPTDMFVDNQSAIASAHAQTSHARTKHIDIHYHFVRERIASNEVRVVHCPSEDNLADALTK 232
BLAST of mRNA_P-wetherbeei_contig18395.1.1 vs. uniprot
Match: A0A060SR77_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SR77_PYCCI) HSP 1 Score: 133 bits (334), Expect = 3.600e-32 Identity = 92/221 (41.63%), Postives = 131/221 (59.28%), Query Frame = 1
Query: 1 YRSIIGSLVHAACITRLDVAYPVRCLARYAAASTVTHMMAAKRVLRYLIGTPTPGLLYYRQPAAATATTTPATASAATALELMDYGDAVPAGSLDARTAVARSTTGRLFLRAGGVVAFSSRLQHSAARSTMESEYMALFDAAWEAEELRDLLAHLGLEQTAPTVIREDNTAALAAAMAARHTHQSRHIRIRYHFTRELVAAGVIVVE-VSTADQLADGLTK 660
Y++++GSL++AA TR D+A+ V+ L++YA+ H+MAAKRVLRYL GT G++Y AT + LE + Y DA A LD R ++A G++FL G + +SSR Q + A+S+ME+EYMA AA E LR LL LG + PT + DN +A+A+A A +++HI I YHF RE +A+ +VV + D LAD LTK
Sbjct: 527 YQAMVGSLMYAALGTRPDIAHAVQQLSQYASNPGPAHIMAAKRVLRYLKGTRMLGIIYCAN----------ATTDSDHPLEPIGYSDADWANDLDDRKSIA----GQVFLLGGAPITWSSRKQRTVAKSSMEAEYMAASAAASEIAWLRALLTELGFPPSGPTPLYVDNQSAIASANAQTSHARTKHIDIHYHFIRERIASNEVVVNHCPSEDNLADALTK 733
BLAST of mRNA_P-wetherbeei_contig18395.1.1 vs. uniprot
Match: A0A8H8SJ14_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8SJ14_9AGAM) HSP 1 Score: 130 bits (328), Expect = 2.840e-31 Identity = 89/221 (40.27%), Postives = 128/221 (57.92%), Query Frame = 1
Query: 1 YRSIIGSLVHAACITRLDVAYPVRCLARYAAASTVTHMMAAKRVLRYLIGTPTPGLLYYRQPAAATATTTPATASAATALELMDYGDAVPAGSLDARTAVARSTTGRLFLRAGGVVAFSSRLQHSAARSTMESEYMALFDAAWEAEELRDLLAHLGLEQTAPTVIREDNTAALAAAMAARHTHQSRHIRIRYHFTRELVAAGVIVVE-VSTADQLADGLTK 660
Y+ ++GSL++A TR D+A+P LA+YAA H A KRVLRYL GT G++Y+R + L+L+ Y DA AG + +RSTTG FL AGGV+A+SSR Q + + S+ E+EY+A AA E +R L+ LG T + DN +A+A A + ++HIR++YHF RE++A + ++ VST DQ+AD LTK
Sbjct: 1203 YQQLVGSLMYAMISTRADIAFPTGLLAQYAANPGKEHWDAGKRVLRYLKGTSNLGIVYHRS----------------SDLKLLGYVDADYAGDKN----TSRSTTGWAFLLAGGVIAYSSRKQPTISLSSTEAEYVADASAARELIWIRQFLSELGFLPEGATPLLSDNQSAMALAKNPINHQTTKHIRVKYHFIREVIALKELDLQYVSTEDQVADALTK 1403
BLAST of mRNA_P-wetherbeei_contig18395.1.1 vs. uniprot
Match: A0A8H8M6H5_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8M6H5_9AGAM) HSP 1 Score: 130 bits (328), Expect = 2.880e-31 Identity = 89/221 (40.27%), Postives = 128/221 (57.92%), Query Frame = 1
Query: 1 YRSIIGSLVHAACITRLDVAYPVRCLARYAAASTVTHMMAAKRVLRYLIGTPTPGLLYYRQPAAATATTTPATASAATALELMDYGDAVPAGSLDARTAVARSTTGRLFLRAGGVVAFSSRLQHSAARSTMESEYMALFDAAWEAEELRDLLAHLGLEQTAPTVIREDNTAALAAAMAARHTHQSRHIRIRYHFTRELVAAGVIVVE-VSTADQLADGLTK 660
Y+ ++GSL++A TR D+A+P LA+YAA H A KRVLRYL GT G++Y+R + L+L+ Y DA AG + +RSTTG FL AGGV+A+SSR Q + + S+ E+EY+A AA E +R L+ LG T + DN +A+A A + ++HIR++YHF RE++A + ++ VST DQ+AD LTK
Sbjct: 1371 YQQLVGSLMYAMISTRADIAFPTGLLAQYAANPGKEHWDAGKRVLRYLKGTSNLGIVYHRS----------------SDLKLLGYVDADYAGDKN----TSRSTTGWAFLLAGGVIAYSSRKQPTISLSSTEAEYVADASAARELIWIRQFLSELGFLPEGATPLLSDNQSAMALAKNPINHQTTKHIRVKYHFIREVIALKELDLQYVSTEDQVADALTK 1571
BLAST of mRNA_P-wetherbeei_contig18395.1.1 vs. uniprot
Match: A0A8H8IX70_9AGAM (Copia-like polyprotein/retrotransposon n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8IX70_9AGAM) HSP 1 Score: 130 bits (328), Expect = 2.920e-31 Identity = 89/221 (40.27%), Postives = 128/221 (57.92%), Query Frame = 1
Query: 1 YRSIIGSLVHAACITRLDVAYPVRCLARYAAASTVTHMMAAKRVLRYLIGTPTPGLLYYRQPAAATATTTPATASAATALELMDYGDAVPAGSLDARTAVARSTTGRLFLRAGGVVAFSSRLQHSAARSTMESEYMALFDAAWEAEELRDLLAHLGLEQTAPTVIREDNTAALAAAMAARHTHQSRHIRIRYHFTRELVAAGVIVVE-VSTADQLADGLTK 660
Y+ ++GSL++A TR D+A+P LA+YAA H A KRVLRYL GT G++Y+R + L+L+ Y DA AG + +RSTTG FL AGGV+A+SSR Q + + S+ E+EY+A AA E +R L+ LG T + DN +A+A A + ++HIR++YHF RE++A + ++ VST DQ+AD LTK
Sbjct: 1203 YQQLVGSLMYAMISTRADIAFPTGLLAQYAANPGKEHWDAGKRVLRYLKGTSNLGIVYHRS----------------SDLKLLGYVDADYAGDKN----TSRSTTGWAFLLAGGVIAYSSRKQPTISLSSTEAEYVADASAARELIWIRQFLSELGFLPEGATPLLSDNQSAMALAKNPINHQTTKHIRVKYHFIREVIALKELDLQYVSTEDQVADALTK 1403
BLAST of mRNA_P-wetherbeei_contig18395.1.1 vs. uniprot
Match: A0A8H8NI06_9AGAM (Copia-like polyprotein/retrotransposon n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8NI06_9AGAM) HSP 1 Score: 129 bits (324), Expect = 9.450e-31 Identity = 88/221 (39.82%), Postives = 128/221 (57.92%), Query Frame = 1
Query: 1 YRSIIGSLVHAACITRLDVAYPVRCLARYAAASTVTHMMAAKRVLRYLIGTPTPGLLYYRQPAAATATTTPATASAATALELMDYGDAVPAGSLDARTAVARSTTGRLFLRAGGVVAFSSRLQHSAARSTMESEYMALFDAAWEAEELRDLLAHLGLEQTAPTVIREDNTAALAAAMAARHTHQSRHIRIRYHFTRELVAAGVIVVE-VSTADQLADGLTK 660
Y+ ++GSL++A TR D+A+P LA+YAA H A KRVLRYL GT G++Y+R + L+L+ Y DA AG + +RSTTG FL AGGV+A+SSR Q + + S+ ++EY+A AA E +R L+ LG T + DN +A+A A + ++HIR++YHF RE++A + ++ VST DQ+AD LTK
Sbjct: 1202 YQQLVGSLMYAMISTRADIAFPTGLLAQYAANPGKEHWDAGKRVLRYLKGTSNLGIVYHRS----------------SDLKLLGYVDADYAGDKN----TSRSTTGWAFLLAGGVIAYSSRKQPTISLSSTKAEYVADASAARELIWIRQFLSELGFLPEGATPLLSDNQSAMALAKNPINHQTTKHIRVKYHFIREVIALKELDLQYVSTEDQVADALTK 1402
BLAST of mRNA_P-wetherbeei_contig18395.1.1 vs. uniprot
Match: H3G656_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G656_PHYRM) HSP 1 Score: 117 bits (294), Expect = 4.340e-29 Identity = 85/222 (38.29%), Postives = 125/222 (56.31%), Query Frame = 1
Query: 1 YRSIIGSLVHAACITRLDVAYPVRCLARYAAASTVTHMMAAKRVLRYLIGTPTPGLLYYRQPAAATATTTPATASAATALELMDYGDAVPAGSLDARTAVARSTTGRLFLRAGGVVAFSSRLQHSAARSTMESEYMALFDAAWEAEELRDLLAHLGLEQTAPTV-IREDNTAALAAAMAARHTHQSRHIRIRYHFTRELVAAGVIVVE-VSTADQLADGLTK 660
YRS +G+L++ TR D+A V L++++A TH A KRVLRYL TPT GL + R+ + L + Y DA AG +++R RST+G F+ GG +++ S+ Q + A S+ E+EYMAL +A EA L+ L LG + V I +DN ++A A + +++HI IRYHF RE V G +V++ +ST D LAD +TK
Sbjct: 7 YRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFSREDS----------------LGMCGYSDADWAGDIESR----RSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYKDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYISTTDMLADIMTK 208
BLAST of mRNA_P-wetherbeei_contig18395.1.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM) HSP 1 Score: 121 bits (304), Expect = 7.200e-29 Identity = 87/222 (39.19%), Postives = 126/222 (56.76%), Query Frame = 1
Query: 1 YRSIIGSLVHAACITRLDVAYPVRCLARYAAASTVTHMMAAKRVLRYLIGTPTPGLLYYRQPAAATATTTPATASAATALELMDYGDAVPAGSLDARTAVARSTTGRLFLRAGGVVAFSSRLQHSAARSTMESEYMALFDAAWEAEELRDLLAHLGLEQTAPTV-IREDNTAALAAAMAARHTHQSRHIRIRYHFTRELVAAGVIVVE-VSTADQLADGLTK 660
YRS++G+L++ TR D+A V L++++A TH A KRVLRYL TPT GL + R+ + L + Y DA AG +++R RST+G F+ GG +++ S+ Q + A S+ E+EYMAL +A EA L+ L LG + V I EDN ++A A + +++HI IRYHF RE V G +V++ VST D LAD +TK
Sbjct: 190 YRSVVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFSREDS----------------LGMCGYSDADWAGDIESR----RSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTK 391
BLAST of mRNA_P-wetherbeei_contig18395.1.1 vs. uniprot
Match: H3GB71_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB71_PHYRM) HSP 1 Score: 119 bits (297), Expect = 1.220e-28 Identity = 86/222 (38.74%), Postives = 125/222 (56.31%), Query Frame = 1
Query: 1 YRSIIGSLVHAACITRLDVAYPVRCLARYAAASTVTHMMAAKRVLRYLIGTPTPGLLYYRQPAAATATTTPATASAATALELMDYGDAVPAGSLDARTAVARSTTGRLFLRAGGVVAFSSRLQHSAARSTMESEYMALFDAAWEAEELRDLLAHLGLEQTAPTV-IREDNTAALAAAMAARHTHQSRHIRIRYHFTRELVAAGVIVVE-VSTADQLADGLTK 660
YRS +G+L++ TR D+A V L++++A TH A KRVLRYL TPT GL + R+ + + + Y DA AG +++R RST+G F+ GG +++ S+ Q + A S+ E+EYMAL +A EA L+ L LG + V I EDN ++A A + +++HI IRYHF RE V G +V++ VST D LAD +TK
Sbjct: 77 YRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFSREDS----------------VGMCGYSDADWAGDIESR----RSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTK 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18395.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18395.1.1 >prot_P-wetherbeei_contig18395.1.1 ID=prot_P-wetherbeei_contig18395.1.1|Name=mRNA_P-wetherbeei_contig18395.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=222bp YRSIIGSLVHAACITRLDVAYPVRCLARYAAASTVTHMMAAKRVLRYLIGback to top mRNA from alignment at P-wetherbeei_contig18395:420..1085- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18395.1.1 ID=mRNA_P-wetherbeei_contig18395.1.1|Name=mRNA_P-wetherbeei_contig18395.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=666bp|location=Sequence derived from alignment at P-wetherbeei_contig18395:420..1085- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18395:420..1085- >mRNA_P-wetherbeei_contig18395.1.1 ID=mRNA_P-wetherbeei_contig18395.1.1|Name=mRNA_P-wetherbeei_contig18395.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=666bp|location=Sequence derived from alignment at P-wetherbeei_contig18395:420..1085- (Phaeothamnion wetherbeei SAG_119_79)back to top |