mRNA_P-wetherbeei_contig18389.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18389.1.1
Unique NamemRNA_P-wetherbeei_contig18389.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18389.1.1 vs. uniprot
Match: A0A1Z5K0X1_FISSO (Putative MFS transporter, AGZA family, xanthine/uracil permease n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0X1_FISSO)

HSP 1 Score: 342 bits (877), Expect = 5.900e-111
Identity = 158/211 (74.88%), Postives = 185/211 (87.68%), Query Frame = 1
Query:   19 FMGWYAFARVGVRSVRCPEALQVIVIGVILGWSTGLNKKSEVDDAVDLIKWYGPYWSAKELFENFSLVSSYLGIVIPIGIAATATTLMCLVSAKTAGEPYPVRETMIADGIGTMCVALFGSPFGTVVYIGHPAHKRSGARTGYSFMNGWIYFILSWFGVLALAAAIVNGATIGPIVLFVGLMMCEETLNFIPARHYAAFIVGVFPSIYDWV 651
            F+GWY+  R+G  + RCPEALQVI++GVI+GWSTGLNKKS V+DA+DL+KWYGP WSA ++F NF L+  YLGIVIPIGI+ATATTLMCLVSAK AG+P+PVRE+MIADGIGTM  + FGSPFGTV+YIGHPAHKRSGA+TGYS  NG IYFILSWFG+LA   +IVN ATIGPIVLFVGL + EE LNFIP+RHYAA+IVG+FPSI+DWV
Sbjct:  303 FLGWYSGVRLGYGNYRCPEALQVIMVGVIMGWSTGLNKKSTVEDAMDLVKWYGPDWSADDMFANFDLIKDYLGIVIPIGISATATTLMCLVSAKNAGDPFPVRESMIADGIGTMIASFFGSPFGTVIYIGHPAHKRSGAKTGYSMANGLIYFILSWFGILAFIQSIVNVATIGPIVLFVGLAINEECLNFIPSRHYAAYIVGLFPSIFDWV 513          
BLAST of mRNA_P-wetherbeei_contig18389.1.1 vs. uniprot
Match: D8LHI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHI4_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 1.890e-97
Identity = 138/217 (63.59%), Postives = 172/217 (79.26%), Query Frame = 1
Query:    1 LPVFTMFMGWYAFARVGVRSVRCPEALQVIVIGVILGWSTGLNKKSEVDDAVDLIKWYGPYWSAKELFENFSLVSSYLGIVIPIGIAATATTLMCLVSAKTAGEPYPVRETMIADGIGTMCVALFGSPFGTVVYIGHPAHKRSGARTGYSFMNGWIYFILSWFGVLALAAAIVNGATIGPIVLFVGLMMCEETLNFIPARHYAAFIVGVFPSIYDWV 651
            L + T+F+GWYA  R+G  + RCPEALQVI++GVILGW+TGLN+  +VD AVDL+KWYGP W+  ++ ENF     YLGIV PI I+A  T+LM LVSAK AG+ YPV E+M+ADG+GTM  +LFGSPFGTV+Y GHPA+K+SGA+TGYS +NG +Y  LSWFG++AL  +IVN  TIGPIVLFVGLM+ EE   F+PARHYAA + G+FPSI DWV
Sbjct:  188 LTITTLFLGWYANVRIGWGNYRCPEALQVIIVGVILGWATGLNESEDVDAAVDLVKWYGPTWTGGDMLENFGDTKDYLGIVFPIAISAVGTSLMALVSAKAAGDAYPVTESMVADGVGTMITSLFGSPFGTVMYFGHPAYKKSGAKTGYSLINGLLYLFLSWFGLVALIRSIVNQPTIGPIVLFVGLMLLEECFRFLPARHYAAVLFGLFPSIADWV 404          
BLAST of mRNA_P-wetherbeei_contig18389.1.1 vs. uniprot
Match: A0A448ZC90_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZC90_9STRA)

HSP 1 Score: 304 bits (779), Expect = 7.640e-97
Identity = 135/212 (63.68%), Postives = 175/212 (82.55%), Query Frame = 1
Query:   16 MFMGWYAFARVGVRSVRCPEALQVIVIGVILGWSTGLNKKSEVDDAVDLIKWYGPYWSAKELFENFSLVSSYLGIVIPIGIAATATTLMCLVSAKTAGEPYPVRETMIADGIGTMCVALFGSPFGTVVYIGHPAHKRSGARTGYSFMNGWIYFILSWFGVLALAAAIVNGATIGPIVLFVGLMMCEETLNFIPARHYAAFIVGVFPSIYDWV 651
            +++GWYA  R+G ++ R PEALQVI++GV++GW TGLNK  +V  A  L+KWYGP W+A E+FE+FS + +YLGI+IP+GI+A A+TLMCLVSAK AG+P+PVRETMI+DG+GT   + FGSPFGTV+YIGHPA+KRSGA+ GYS +NG  Y I SWFG+LAL  +IVN  TIGPIV FVGL + EE LNF+P+R YAA+I+G+FPS+YDW+
Sbjct:  228 VYLGWYAGVRIGYKNFRLPEALQVIIVGVVMGWITGLNKSEDVAKASKLVKWYGPTWTATEMFEDFSDLKNYLGIIIPLGISAAASTLMCLVSAKEAGDPFPVRETMISDGVGTCISSFFGSPFGTVIYIGHPAYKRSGAKAGYSLVNGVTYLIFSWFGILALIQSIVNQPTIGPIVFFVGLQVNEEALNFMPSRQYAAYIIGLFPSVYDWL 439          
BLAST of mRNA_P-wetherbeei_contig18389.1.1 vs. uniprot
Match: A0A7S4EKF1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EKF1_9STRA)

HSP 1 Score: 301 bits (771), Expect = 6.800e-96
Identity = 134/215 (62.33%), Postives = 173/215 (80.47%), Query Frame = 1
Query:    7 VFTMFMGWYAFARVGVRSVRCPEALQVIVIGVILGWSTGLNKKSEVDDAVDLIKWYGPYWSAKELFENFSLVSSYLGIVIPIGIAATATTLMCLVSAKTAGEPYPVRETMIADGIGTMCVALFGSPFGTVVYIGHPAHKRSGARTGYSFMNGWIYFILSWFGVLALAAAIVNGATIGPIVLFVGLMMCEETLNFIPARHYAAFIVGVFPSIYDWV 651
            +  +++GWYA  RVG ++ R PEALQVI++GVI+GW+TGLNK     +A  L+KWYGP W+A E+F++FS + +YLGI+IP+GI+A A+TLMCLVSAK AG+P+PVRE+MI DGIGT   + FGSPFGTV+YIGHPA+KRSGA+ GYS  NG  Y + SWFG+LAL  +IVN  TIGPIV FVGL + EE LNF+P R YAA+I+G+FPS+YDW+
Sbjct:  228 ILWVYLGWYAGVRVGYKNFRLPEALQVIIVGVIMGWATGLNKSEATANASKLVKWYGPTWTATEMFQDFSEIKNYLGIIIPLGISAAASTLMCLVSAKEAGDPFPVRESMIVDGIGTCIASFFGSPFGTVIYIGHPAYKRSGAKVGYSLANGVTYLLFSWFGILALIQSIVNQPTIGPIVFFVGLQVNEEALNFMPNRQYAAYIIGLFPSVYDWL 442          
BLAST of mRNA_P-wetherbeei_contig18389.1.1 vs. uniprot
Match: A0A814JW36_9BILA (Hypothetical protein n=3 Tax=Rotaria sordida TaxID=392033 RepID=A0A814JW36_9BILA)

HSP 1 Score: 198 bits (504), Expect = 1.340e-58
Identity = 94/205 (45.85%), Postives = 131/205 (63.90%), Query Frame = 1
Query:   34 AFARVGVRSVRCPEALQVIVIGVILGWSTGLNKKSEVDDAVDLIKWYGPYWSAKELFENFSLVSSYLGIVIPIGIAATATTLMCLVSAKTAGEPYPVRETMIADGIGTMCVALFGSPFGTVVYIGHPAHKRSGARTGYSFMNGWIYFILSWFGVLALAAAIVNGATIGPIVLFVGLMMCEETLNFIPARHYAAFIVGVFPSIYDW 648
            AFA + V+  R P A+  ++IG  LGW+T  N+  +V DA  L+K Y P +  + +FEN + +  YL I+IP GI+    T+ C+ SAK AG+ YP RE M ADG+GT+  +LFGS  G  VYIGHPA+KR GAR  YS +N   Y  L +FG++AL   I+    + P+++F+GL MC ETL   P RHY AF++G+ P + DW
Sbjct:   36 AFAFIFVKIGRVPIAIVALIIGTALGWATSTNEAQDVRDASKLVKPYAPVFPVQGMFENMNRLGPYLSIIIPTGISIAIGTIQCVESAKRAGDFYPTREAMFADGVGTILASLFGSILGMTVYIGHPAYKRMGARQAYSVINCLAYAPLCFFGIIALFIRIIAVVAVNPVIIFIGLFMCAETLAITPPRHYIAFLLGLTPVVADW 240          
BLAST of mRNA_P-wetherbeei_contig18389.1.1 vs. uniprot
Match: A0A815AKP2_9BILA (Hypothetical protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A815AKP2_9BILA)

HSP 1 Score: 198 bits (504), Expect = 4.690e-57
Identity = 94/216 (43.52%), Postives = 134/216 (62.04%), Query Frame = 1
Query:    1 LPVFTMFMGWYAFARVGVRSVRCPEALQVIVIGVILGWSTGLNKKSEVDDAVDLIKWYGPYWSAKELFENFSLVSSYLGIVIPIGIAATATTLMCLVSAKTAGEPYPVRETMIADGIGTMCVALFGSPFGTVVYIGHPAHKRSGARTGYSFMNGWIYFILSWFGVLALAAAIVNGATIGPIVLFVGLMMCEETLNFIPARHYAAFIVGVFPSIYDW 648
            LP   + +G+    ++G    R P A+  ++IG  LGW+T  N+  +V DA  L+K Y P +  + +FEN + +  YL I+IP GI+    T+ C+ SAK AG+ YP RE M ADG+GT+  +LFGS  G  VYIGHPA+KR GAR  YS +N   Y  L +FG++AL   I+    + P+++F+GL MC ETL   P RHY AF++G+ P + DW
Sbjct:  191 LPFSIVILGYCGKVKIG----RVPIAIVALIIGTALGWATSTNEAQDVRDASKLVKPYAPVFPVQGMFENMNRIGPYLSIIIPTGISIAIGTIQCVESAKRAGDFYPTREAMFADGVGTILASLFGSILGMTVYIGHPAYKRMGARQAYSVINCLAYAPLCFFGIIALFIRIIAVVAVNPVIIFIGLFMCAETLAITPPRHYIAFLLGLTPVVADW 402          
BLAST of mRNA_P-wetherbeei_contig18389.1.1 vs. uniprot
Match: A0A820WEI6_9BILA (Hypothetical protein n=4 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820WEI6_9BILA)

HSP 1 Score: 191 bits (484), Expect = 8.720e-54
Identity = 91/216 (42.13%), Postives = 134/216 (62.04%), Query Frame = 1
Query:    1 LPVFTMFMGWYAFARVGVRSVRCPEALQVIVIGVILGWSTGLNKKSEVDDAVDLIKWYGPYWSAKELFENFSLVSSYLGIVIPIGIAATATTLMCLVSAKTAGEPYPVRETMIADGIGTMCVALFGSPFGTVVYIGHPAHKRSGARTGYSFMNGWIYFILSWFGVLALAAAIVNGATIGPIVLFVGLMMCEETLNFIPARHYAAFIVGVFPSIYDW 648
            LP   + +G+++  +VG      P A   +V+G  LGW+T LNK  +V +A  +IK Y P ++AK +F + + +  +L   IP  I+    T+ C+ SAK AG+ YP RE+M ADGIGT+  + FGS  G   YIGHPA+K+ GAR  YS +N  IY  L +FG++AL   I+    + P+++F+GL +C ETL   P RHY AF++G+ P+I DW
Sbjct:  235 LPFAIVMIGYFSGIKVG----PFPIASVALVVGTALGWATSLNKGEDVRNATVVIKAYAPEFTAKAIFAHMNRIGPFLSTTIPTAISIAIGTIQCVESAKRAGDFYPTRESMFADGIGTIIASFFGSFLGMTTYIGHPAYKKMGARQAYSLINCLIYVPLCFFGIIALLLRIITVVAVNPVIIFIGLFICAETLAITPPRHYPAFLLGIMPAIADW 446          
BLAST of mRNA_P-wetherbeei_contig18389.1.1 vs. uniprot
Match: A0A817A1G5_9BILA (Hypothetical protein n=6 Tax=Rotaria TaxID=231623 RepID=A0A817A1G5_9BILA)

HSP 1 Score: 190 bits (483), Expect = 1.400e-53
Identity = 91/216 (42.13%), Postives = 133/216 (61.57%), Query Frame = 1
Query:    1 LPVFTMFMGWYAFARVGVRSVRCPEALQVIVIGVILGWSTGLNKKSEVDDAVDLIKWYGPYWSAKELFENFSLVSSYLGIVIPIGIAATATTLMCLVSAKTAGEPYPVRETMIADGIGTMCVALFGSPFGTVVYIGHPAHKRSGARTGYSFMNGWIYFILSWFGVLALAAAIVNGATIGPIVLFVGLMMCEETLNFIPARHYAAFIVGVFPSIYDW 648
            +P+  + +G++     GV+    P A   +VIG  L W T   K S V +A+DL+K Y P +   ++F++F  VS YL   IP  I+    T+ C+ SAK AG+ YP RE M ADG+GT+  +LFGS FG   YIGHPA K+ GAR  YS MNG  Y  L + G+ AL  +++  A+I PI++F+GL++C +TL+  P RHY AF++G+   + +W
Sbjct:  239 IPLAIVMLGYFG----GVKYGPFPVAFLALVIGTALDWITPTKKVSAVVEALDLVKGYQPVFPIAQIFQHFKFVSGYLSTTIPTAISIAIGTIQCVESAKRAGDFYPTREVMFADGVGTLIASLFGSVFGMTTYIGHPAFKKMGARQAYSIMNGLAYLPLCFLGITALLMSMIAIASINPIIIFIGLVICADTLSITPRRHYPAFLLGIMSIVAEW 450          
BLAST of mRNA_P-wetherbeei_contig18389.1.1 vs. uniprot
Match: A0A821N3J4_9BILA (Hypothetical protein n=5 Tax=Rotaria TaxID=231623 RepID=A0A821N3J4_9BILA)

HSP 1 Score: 190 bits (482), Expect = 1.700e-53
Identity = 92/216 (42.59%), Postives = 131/216 (60.65%), Query Frame = 1
Query:    1 LPVFTMFMGWYAFARVGVRSVRCPEALQVIVIGVILGWSTGLNKKSEVDDAVDLIKWYGPYWSAKELFENFSLVSSYLGIVIPIGIAATATTLMCLVSAKTAGEPYPVRETMIADGIGTMCVALFGSPFGTVVYIGHPAHKRSGARTGYSFMNGWIYFILSWFGVLALAAAIVNGATIGPIVLFVGLMMCEETLNFIPARHYAAFIVGVFPSIYDW 648
            LP   + +G+++  ++G      P A+  +VIG  LGW+T LNK  +V DA  +IK Y P  + K +F+N + V  YL   IP  I+    T+ C+ SAK AG+ YP  E M ADGIGT+  + FGS  G   YIG PA+K+ GAR  YS  N  IY +L +FG++AL   +++   + P+++F+GL +C ETL   P RHY AF+VG+ P I DW
Sbjct:  235 LPFAIVMIGYFSGIKIG----PIPVAVVALVIGTSLGWATALNKAQDVIDATLIIKPYSPTVTIKNVFDNINRVGPYLSTTIPTAISIAIGTIQCVESAKRAGDFYPTHEAMFADGIGTIIASFFGSFLGMTTYIGQPAYKKMGARQTYSIANCLIYVLLCFFGIIALFLRVISVVAVNPVIIFIGLFICAETLAITPRRHYPAFLVGIMPVIADW 446          
BLAST of mRNA_P-wetherbeei_contig18389.1.1 vs. uniprot
Match: A0A814EYH1_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814EYH1_ADIRI)

HSP 1 Score: 189 bits (480), Expect = 3.270e-53
Identity = 91/217 (41.94%), Postives = 134/217 (61.75%), Query Frame = 1
Query:    1 LPVFTMFMGWYAFARVGVRSVRCPEALQVIVIGVILGWSTGLNKKSEVDDAVDLIKWYGPYWSAKELFENFSLVSSYLGIVIPIGIAATATTLMCLVSAKTAGEPYPVRETMIADGIGTMCVALFGSPFGTVVYIGHPAHKRSGARTGYSFMNGWIYFILSWFGVLALAAAIVNGATIGPIVLFVGLMMCEETLNFIPARHYAAFIVGVFPSIYDWV 651
            LP   + +G+++  ++G      P A+  +V+G  LGW T LNK  +V DA  +IK Y P +  + +F + S +  YL   IP  I+    T+ C+ SA+ AG+ YP RE+M ADG+GT+  +LFGS  G  VYIGHPA+K+ GAR  YS +N  IY  L +FG++A+   I+    + P+++F+GL +C ETL   P RHY AF++G+ P I DWV
Sbjct:  234 LPFGIVMIGYFSGIKIG----PFPIAIVALVVGTALGWLTSLNKGQDVRDASLVIKPYVPVFPIRAIFVHISQIGPYLSTTIPTAISIAIGTIQCVESARRAGDLYPTRESMFADGVGTIISSLFGSFLGMTVYIGHPAYKKMGARQAYSIINCLIYLPLCFFGIIAIFLRIIAVVAVNPVIIFIGLFICAETLTITPPRHYPAFLLGIMPVIADWV 446          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18389.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z5K0X1_FISSO5.900e-11174.88Putative MFS transporter, AGZA family, xanthine/ur... [more]
D8LHI4_ECTSI1.890e-9763.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A448ZC90_9STRA7.640e-9763.68Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4EKF1_9STRA6.800e-9662.33Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A814JW36_9BILA1.340e-5845.85Hypothetical protein n=3 Tax=Rotaria sordida TaxID... [more]
A0A815AKP2_9BILA4.690e-5743.52Hypothetical protein n=2 Tax=Rotaria sordida TaxID... [more]
A0A820WEI6_9BILA8.720e-5442.13Hypothetical protein n=4 Tax=Rotaria sp. Silwood2 ... [more]
A0A817A1G5_9BILA1.400e-5342.13Hypothetical protein n=6 Tax=Rotaria TaxID=231623 ... [more]
A0A821N3J4_9BILA1.700e-5342.59Hypothetical protein n=5 Tax=Rotaria TaxID=231623 ... [more]
A0A814EYH1_ADIRI3.270e-5341.94Hypothetical protein n=2 Tax=Adineta ricciae TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18389contigP-wetherbeei_contig18389:9..1302 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr13078
Model size654
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
Exons3
Evalue1.97e-98
EggNOG OGsCOG2252@1|root,2QRYA@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-11_003950.1
Descriptionpurine nucleobase transmembrane transporter activity
Cds size639
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186144.3572848-CDS-P-wetherbeei_contig18389:8..2111683186144.3572848-CDS-P-wetherbeei_contig18389:8..211Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18389 9..211 -
1683186144.3664012-CDS-P-wetherbeei_contig18389:522..7781683186144.3664012-CDS-P-wetherbeei_contig18389:522..778Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18389 523..778 -
1683186144.374946-CDS-P-wetherbeei_contig18389:1107..12871683186144.374946-CDS-P-wetherbeei_contig18389:1107..1287Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18389 1108..1287 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186144.385112-UTR-P-wetherbeei_contig18389:1287..13021683186144.385112-UTR-P-wetherbeei_contig18389:1287..1302Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig18389 1288..1302 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18389.1.1prot_P-wetherbeei_contig18389.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18389 9..1287 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18389.1.1

>prot_P-wetherbeei_contig18389.1.1 ID=prot_P-wetherbeei_contig18389.1.1|Name=mRNA_P-wetherbeei_contig18389.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=213bp
MFMGWYAFARVGVRSVRCPEALQVIVIGVILGWSTGLNKKSEVDDAVDLI
KWYGPYWSAKELFENFSLVSSYLGIVIPIGIAATATTLMCLVSAKTAGEP
YPVRETMIADGIGTMCVALFGSPFGTVVYIGHPAHKRSGARTGYSFMNGW
IYFILSWFGVLALAAAIVNGATIGPIVLFVGLMMCEETLNFIPARHYAAF
IVGVFPSIYDWV*
back to top

mRNA from alignment at P-wetherbeei_contig18389:9..1302-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18389.1.1 ID=mRNA_P-wetherbeei_contig18389.1.1|Name=mRNA_P-wetherbeei_contig18389.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1294bp|location=Sequence derived from alignment at P-wetherbeei_contig18389:9..1302- (Phaeothamnion wetherbeei SAG_119_79)
CTGCCAGTCTTCACCATGTTTATGGGCTGGTATGCGTTCGCCCGCGTCGG CGTCCGCAGCGTGCGCTGCCCCGAGGCGCTGCAGGTGATTGTCATCGGAG TCATCCTAGGCTGGTCGACGGGCCTCAACAAAAAGTCTGAGGTGGACGAT GCCGTCGACCTTATCAAGTGGTACGGCCCCTACTGGTCCGCCAAGGTGCG TTTTTTGCTGCGTCCTATTTAATTCTATTCTGCAGTTCTTGTTCTCCGGC GCCAATGACAGTGCCTGCAGGCGGTGCGGCGTGCGAATCCCAACGTTTTT TCTCTTCCCATGGGAACTGGGCCGGCGTGATGGTCCGGCGGCGGGTGCTT TTTCTAGGGGTGGGAGCAGCTCATCTGCGGTGTTGCAGGCGCAGTGCCAG TGTGGCGGGGCCGCCAAATTGGCGCGAGAAAGGAGATGGATTGTGCTCGC GGTGCGCTTACCTTCCTTCTCTTCTTCTTTCTCCGCTGTTGCCGCCGCCG CTGCCGTCTTCTTCGCCGTTGCAGGAGCTCTTCGAGAACTTCAGCCTCGT CTCGTCCTACCTCGGCATCGTCATCCCCATCGGCATCGCCGCCACCGCCA CAACTCTCATGTGCCTCGTCTCCGCGAAGACCGCGGGCGAGCCGTACCCC GTCCGGGAGACGATGATCGCCGACGGCATTGGCACCATGTGCGTCGCGCT GTTCGGCTCGCCCTTTGGCACCGTCGTCTACATCGGCCACCCGGCGCACA AGCGCTCCGGCGCCCGAACCGGCTATTCCTGTGAGTCTTTTCGTGTTTTT CCTTCCCCCCCCCGTAAAAGCCGTGCTTGCGGTTTAGATCAGTGCATTTT TCTTCCCTTTTTGTTGGAGATTTCAGGTTCCTTGCCTTGGTGTGGAGCAG GTGCTGCCGCTGCCGTGGCCGTTTTGCTTGCGTCCTGCCCTTTCCTTCTT GCGCTTACCATTCGGCTTCCCTCCCTACCTGATGCAAGAGCTGAGGCGTC CCCTTTTTGCCTCCCTTTCCCCAACGGCGCTGTGCGGCCCGCGTTCCGGC CGCCGCTTTGCCCTGACCCGACCCGCCGCCGCCTGTCGCAGTCATGAACG GGTGGATCTACTTTATCCTATCATGGTTTGGCGTGCTGGCGCTGGCCGCC GCCATCGTCAACGGTGCCACCATCGGCCCCATCGTGCTCTTCGTCGGCCT CATGATGTGTGAGGAGACGCTCAATTTCATCCCCGCGCGCCACTACGCCG CCTTCATCGTTGGCGTCTTCCCTTCCATCTACGACTGGGTGTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig18389:9..1302-

>mRNA_P-wetherbeei_contig18389.1.1 ID=mRNA_P-wetherbeei_contig18389.1.1|Name=mRNA_P-wetherbeei_contig18389.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig18389:9..1302- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTTATGGGCTGGTATGCGTTCGCCCGCGTCGGCGTCCGCAGCGTGCG
CTGCCCCGAGGCGCTGCAGGTGATTGTCATCGGAGTCATCCTAGGCTGGT
CGACGGGCCTCAACAAAAAGTCTGAGGTGGACGATGCCGTCGACCTTATC
AAGTGGTACGGCCCCTACTGGTCCGCCAAGGAGCTCTTCGAGAACTTCAG
CCTCGTCTCGTCCTACCTCGGCATCGTCATCCCCATCGGCATCGCCGCCA
CCGCCACAACTCTCATGTGCCTCGTCTCCGCGAAGACCGCGGGCGAGCCG
TACCCCGTCCGGGAGACGATGATCGCCGACGGCATTGGCACCATGTGCGT
CGCGCTGTTCGGCTCGCCCTTTGGCACCGTCGTCTACATCGGCCACCCGG
CGCACAAGCGCTCCGGCGCCCGAACCGGCTATTCCTTCATGAACGGGTGG
ATCTACTTTATCCTATCATGGTTTGGCGTGCTGGCGCTGGCCGCCGCCAT
CGTCAACGGTGCCACCATCGGCCCCATCGTGCTCTTCGTCGGCCTCATGA
TGTGTGAGGAGACGCTCAATTTCATCCCCGCGCGCCACTACGCCGCCTTC
ATCGTTGGCGTCTTCCCTTCCATCTACGACTGGGTGTGA
back to top