mRNA_P-wetherbeei_contig1835.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1835.3.1 vs. uniprot
Match: A0A6H5JVU6_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVU6_9PHAE) HSP 1 Score: 270 bits (690), Expect = 4.890e-83 Identity = 136/209 (65.07%), Postives = 166/209 (79.43%), Query Frame = 1
Query: 1 QVVALAGGSGAGKSTAAALLCRLYEPLEGRVTLDGVDLATLKPSWLRSAVGVVEQEPVLFSGTVGENIRFGRPNATDADVVRAAKEANCHDFVSAFPLGYDTPVGEHGRLLSGGQRQRVAIARAILKDPPLLILDEATSALTQRSERLVAEALERAMWGRTVLVIAHRLSTVRRADVVAVLEGGRITEMGSFDELMAKPEGTLQKLMDG 627
+V+AL G SG GKST AAL+ RLYEP +G +TLDGVD+ATL PSWLR +GVV+QEPVLF+G++ NIR+G P+ATD V AAK+AN HDF+ FP Y+T VG+ GR LSGGQ+QRVAIARA+LK+PP+LILDEATSAL SERLV+EA++R + RTVLVIAHR STV++AD VAVL+GG + E G+F LMAK G L LMDG
Sbjct: 527 KVLALTGASGEGKSTLAALITRLYEPRQGCITLDGVDIATLNPSWLRRQIGVVDQEPVLFAGSISYNIRYGVPSATDKQVEAAAKQANAHDFIMDFPEAYETKVGDEGRQLSGGQKQRVAIARAVLKNPPILILDEATSALDAESERLVSEAIDRVVASRTVLVIAHRQSTVKKADSVAVLQGGTVAEQGTFGNLMAKSGGQLASLMDG 735
BLAST of mRNA_P-wetherbeei_contig1835.3.1 vs. uniprot
Match: A0A835ZC17_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC17_9STRA) HSP 1 Score: 252 bits (644), Expect = 6.910e-78 Identity = 131/210 (62.38%), Postives = 162/210 (77.14%), Query Frame = 1
Query: 4 VVALAGGSGAGKSTAAALLCRLYEPLEGRVTLDGVDLATLKPSWLRSAVGVVEQEPVLFSGTVGENIRFGRPNATDADVVRAAKEANCHDFVSAFPLGYDTPVGEHGRLLSGGQRQRVAIARAILKDPPLLILDEATSALTQRSERLVAEALERAM--WGRTVLVIAHRLSTVRRADVVAVLEGGRITEMGSFDELMAKPEGTLQKLMDG 627
++AL G SG GKST AAL+ RLY+P GR++LDGVD ATL PSWLR AVGVVEQ+PVLF+G+V +NI++GRP A+ ADV AA+ AN H F+ FP GY+T VG+ GR LSGGQRQRVAIARA+L DPPLL+LDEATSAL SERLV +A+E+ M RT+L+IAHR ST+++A VAVL GRI E GS+ +L+A+ G L LM G
Sbjct: 347 ILALTGPSGHGKSTLAALITRLYQPTAGRISLDGVDTATLSPSWLRGAVGVVEQDPVLFAGSVADNIKYGRPGASAADVEAAARAANAHQFILEFPDGYNTKVGQRGRQLSGGQRQRVAIARALLWDPPLLLLDEATSALDAESERLVRDAMEKLMDRENRTLLIIAHRQSTIQKAHTVAVLRDGRIVESGSYADLIARSGGELAALMSG 556
BLAST of mRNA_P-wetherbeei_contig1835.3.1 vs. uniprot
Match: A0A3S8RHE5_9TELE (ABCB8 (Fragment) n=1 Tax=Rasbora sarawakensis TaxID=1986953 RepID=A0A3S8RHE5_9TELE) HSP 1 Score: 240 bits (613), Expect = 2.090e-77 Identity = 122/199 (61.31%), Postives = 153/199 (76.88%), Query Frame = 1
Query: 1 QVVALAGGSGAGKSTAAALLCRLYEPLEGRVTLDGVDLATLKPSWLRS-AVGVVEQEPVLFSGTVGENIRFGRPNATDADVVRAAKEANCHDFVSAFPLGYDTPVGEHGRLLSGGQRQRVAIARAILKDPPLLILDEATSALTQRSERLVAEALERAMWGRTVLVIAHRLSTVRRADVVAVLEGGRITEMGSFDELMAK 594
+ VA+ G SG GKST AALL R Y+P G V LDG+D+ TL PSWLR +G + QEPVLF +V ENIRFG+PNATDA+V AAK+AN H+F++ FP GY+T VGE G LSGGQ+QR+AIARA++K+P +LILDEATSAL SER+V EAL+RA GRTVL+IAHRLST++ AD++ V+ GRI E G+ EL+ K
Sbjct: 23 KTVAIVGESGGGKSTVAALLERFYDPSSGVVMLDGLDIRTLDPSWLRGHVIGFISQEPVLFGTSVMENIRFGKPNATDAEVTAAAKQANAHNFITGFPDGYNTVVGERGVTLSGGQKQRIAIARALIKNPSILILDEATSALDAESERVVQEALDRATTGRTVLIIAHRLSTIQAADIICVMSNGRIVEAGTHLELLTK 221
BLAST of mRNA_P-wetherbeei_contig1835.3.1 vs. uniprot
Match: A0A1H7TJT3_STIAU (ATP-binding cassette, subfamily B n=4 Tax=Stigmatella TaxID=40 RepID=A0A1H7TJT3_STIAU) HSP 1 Score: 248 bits (634), Expect = 3.870e-76 Identity = 130/208 (62.50%), Postives = 159/208 (76.44%), Query Frame = 1
Query: 1 QVVALAGGSGAGKSTAAALLCRLYEPLEGRVTLDGVDLATLKPSWLRSAVGVVEQEPVLFSGTVGENIRFGRPNATDADVVRAAKEANCHDFVSAFPLGYDTPVGEHGRLLSGGQRQRVAIARAILKDPPLLILDEATSALTQRSERLVAEALERAMWGRTVLVIAHRLSTVRRADVVAVLEGGRITEMGSFDELMAKPEGTLQKLMD 624
++VA+ G SGAGKST A+LL RLY+P GR+ LDG DL TL P WLR +GVV QEP+LFS ++ ENIR+GR +A+DA+V AA+ AN HDF+S FP GY TPVGE G LSGGQ+QRVAIARA+LKDP LLILDEATSAL SE LV +ALER M GRT L+IAHRLSTV A+ V VLEGG + + GS LM++ EG ++L++
Sbjct: 375 EIVAIVGPSGAGKSTIASLLTRLYDPQGGRILLDGQDLRTLDPEWLRQQIGVVAQEPLLFSSSIAENIRYGRMDASDAEVEAAARAANAHDFISRFPEGYRTPVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMQGRTTLIIAHRLSTVMGANRVLVLEGGNVVQSGSHAALMSQ-EGLYRRLVE 581
BLAST of mRNA_P-wetherbeei_contig1835.3.1 vs. uniprot
Match: I2CRG6_NANGC (Efflux abc transporter permease atp-binding protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRG6_NANGC) HSP 1 Score: 238 bits (608), Expect = 4.660e-76 Identity = 121/212 (57.08%), Postives = 160/212 (75.47%), Query Frame = 1
Query: 1 QVVALAGGSGAGKSTAAALLCRLYEPLEG-----RVTLDGVDLATLKPSWLRSAVGVVEQEPVLFSGTVGENIRFGRPNATDADVVRAAKEANCHDFVSAFPLGYDTPVGEHGRL-LSGGQRQRVAIARAILKDPPLLILDEATSALTQRSERLVAEALERAMWGRTVLVIAHRLSTVRRADVVAVLEGGRITEMGSFDELMAKPEGTLQKL 618
QV A+ G SG+GKST ALL +LY G R+ +DG ++ + P+W+R VG+VEQEP LF+GT+ ENIR+GRP+ATDA+V +AAK+AN HDF++AFP GY T VGE G+ LSGG+RQR+ +ARA++K PP+L+LDEATS+L SERLV EALE+AM GRT +V+AHRLSTV +ADV+ VLE G I E G+F EL+ + +G +L
Sbjct: 40 QVAAIVGASGSGKSTLLALLLQLYRLKGGGEGGGRIWVDGEEVGAVDPAWVRGQVGLVEQEPALFTGTIAENIRYGRPSATDAEVEQAAKDANAHDFITAFPDGYQTYVGERGKAQLSGGERQRITLARALVKRPPILVLDEATSSLDPESERLVQEALEKAMRGRTTVVVAHRLSTVEKADVIFVLEKGHIAEKGNFRELLNRKDGAFARL 251
BLAST of mRNA_P-wetherbeei_contig1835.3.1 vs. uniprot
Match: A0A7R9BKC0_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BKC0_9CRUS) HSP 1 Score: 238 bits (607), Expect = 8.000e-76 Identity = 120/199 (60.30%), Postives = 154/199 (77.39%), Query Frame = 1
Query: 1 QVVALAGGSGAGKSTAAALLCRLYEPLEGRVTLDGVDLATLKPSWLRS-AVGVVEQEPVLFSGTVGENIRFGRPNATDADVVRAAKEANCHDFVSAFPLGYDTPVGEHGRLLSGGQRQRVAIARAILKDPPLLILDEATSALTQRSERLVAEALERAMWGRTVLVIAHRLSTVRRADVVAVLEGGRITEMGSFDELMAK 594
Q VAL G SG GKST AALL R Y+ EGRV +D D+ +L P+WLR+ +G + Q+PVLF+ ++ ENIR+GRP+A++A+V+ AAK AN HDF+S+FP GYDT VGE G LSGGQ+QR+ IARA+LKDP +LILDEATSAL SE +V +AL++AM GRT LVIAHRLST+R ADV+AV+ G + E GS +EL+ K
Sbjct: 48 QTVALCGPSGGGKSTIAALLERFYDTSEGRVLIDNADIRSLDPTWLRTNVIGYISQDPVLFATSIKENIRYGRPSASEAEVMEAAKMANAHDFISSFPDGYDTMVGERGVALSGGQKQRITIARALLKDPKILILDEATSALDTESEAIVQQALDKAMEGRTTLVIAHRLSTIRNADVIAVIVRGELVESGSHEELLTK 246
BLAST of mRNA_P-wetherbeei_contig1835.3.1 vs. uniprot
Match: A0A6G1RDU0_9GRUI (ATP binding cassette subfamily B member 8 (Fragment) n=1 Tax=Hypotaenidia okinawae TaxID=2861861 RepID=A0A6G1RDU0_9GRUI) HSP 1 Score: 236 bits (601), Expect = 1.300e-75 Identity = 120/199 (60.30%), Postives = 152/199 (76.38%), Query Frame = 1
Query: 1 QVVALAGGSGAGKSTAAALLCRLYEPLEGRVTLDGVDLATLKPSWLRS-AVGVVEQEPVLFSGTVGENIRFGRPNATDADVVRAAKEANCHDFVSAFPLGYDTPVGEHGRLLSGGQRQRVAIARAILKDPPLLILDEATSALTQRSERLVAEALERAMWGRTVLVIAHRLSTVRRADVVAVLEGGRITEMGSFDELMAK 594
+ VA+ G SG GKST AALL R YEP +G +TLDG D++ L PSWLR +G + QEPVLF T+ ENIRFG+P A+DA+V AA+ AN F+ FP GY+T VGE G LSGGQ+QR+AIARA+LKDPP+L+LDEATSAL +SER+V EAL+RA GRTVL+IAHRLST+R AD++ VL GR+ E G+ +EL+ +
Sbjct: 7 KTVAIVGPSGGGKSTVAALLERFYEPTQGTITLDGHDISGLDPSWLRGHVIGFISQEPVLFGTTILENIRFGQPGASDAEVHAAARLANADSFIRGFPEGYNTVVGERGATLSGGQKQRIAIARALLKDPPVLVLDEATSALDAQSERVVQEALDRAAAGRTVLLIAHRLSTIRHADLIVVLAQGRVAEAGTHEELVRR 205
BLAST of mRNA_P-wetherbeei_contig1835.3.1 vs. uniprot
Match: A0A4V0XF63_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A4V0XF63_9DELT) HSP 1 Score: 245 bits (626), Expect = 5.090e-75 Identity = 127/208 (61.06%), Postives = 157/208 (75.48%), Query Frame = 1
Query: 1 QVVALAGGSGAGKSTAAALLCRLYEPLEGRVTLDGVDLATLKPSWLRSAVGVVEQEPVLFSGTVGENIRFGRPNATDADVVRAAKEANCHDFVSAFPLGYDTPVGEHGRLLSGGQRQRVAIARAILKDPPLLILDEATSALTQRSERLVAEALERAMWGRTVLVIAHRLSTVRRADVVAVLEGGRITEMGSFDELMAKPEGTLQKLMD 624
+V+AL G SG GKST A+LL RLY+P+ GRVT DG D+ L SWLR +G+V QEPVLF+ T+ ENIR+GRP A+DA+V AA+ AN HDFV FP Y+T VGE G LSGGQ+QR+AIARAILKDP +L+LDEATSAL SE LV EAL+R M GRT LVIAHRLSTV+ AD V V++ GR+ E G+ DEL+A G ++L++
Sbjct: 369 KVLALVGQSGGGKSTVASLLLRLYDPVSGRVTFDGHDIRELDTSWLREQIGIVSQEPVLFATTIAENIRYGRPGASDAEVEAAARAANAHDFVGGFPEKYETVVGERGVRLSGGQKQRIAIARAILKDPRVLVLDEATSALDAESEHLVQEALDRLMRGRTTLVIAHRLSTVKTADKVVVIQHGRVAESGTHDELVAA-NGAYRRLVE 575
BLAST of mRNA_P-wetherbeei_contig1835.3.1 vs. uniprot
Match: S9P1T4_9DELT (Lipid A export ATP-binding/permease protein MsbA n=2 Tax=Cystobacter fuscus TaxID=43 RepID=S9P1T4_9DELT) HSP 1 Score: 245 bits (626), Expect = 5.210e-75 Identity = 131/207 (63.29%), Postives = 156/207 (75.36%), Query Frame = 1
Query: 1 QVVALAGGSGAGKSTAAALLCRLYEPLEGRVTLDGVDLATLKPSWLRSAVGVVEQEPVLFSGTVGENIRFGRPNATDADVVRAAKEANCHDFVSAFPLGYDTPVGEHGRLLSGGQRQRVAIARAILKDPPLLILDEATSALTQRSERLVAEALERAMWGRTVLVIAHRLSTVRRADVVAVLEGGRITEMGSFDELMAKPEGTLQKLM 621
+VVAL G SG GKST A+LL RLY+P GRV LDGVDL TL P WLR VG V QEP+LFS ++ +NIR+GR +ATDA+V AA+ AN H+F+S FP GY T VGE G LSGGQ+QR+AIARA+LKDP LL+LDEATSAL SE LV EALER M GRT L+IAHRLSTV AD V V+EGGR+ + GS LM + EG ++L+
Sbjct: 369 EVVALVGPSGGGKSTIASLLVRLYDPQGGRVLLDGVDLRTLDPEWLRQQVGSVAQEPLLFSDSIADNIRYGRMDATDAEVEAAARAANAHEFISRFPEGYRTHVGERGVQLSGGQKQRIAIARAVLKDPRLLVLDEATSALDAESEHLVQEALERLMRGRTTLIIAHRLSTVTGADRVLVVEGGRVVQSGSHATLMTQ-EGLYRRLV 574
BLAST of mRNA_P-wetherbeei_contig1835.3.1 vs. uniprot
Match: A0A017SXY2_9DELT (Efflux ABC transporter, permease/ATP-binding protein n=1 Tax=Chondromyces apiculatus DSM 436 TaxID=1192034 RepID=A0A017SXY2_9DELT) HSP 1 Score: 245 bits (626), Expect = 1.030e-74 Identity = 130/208 (62.50%), Postives = 157/208 (75.48%), Query Frame = 1
Query: 1 QVVALAGGSGAGKSTAAALLCRLYEPLEGRVTLDGVDLATLKPSWLRSAVGVVEQEPVLFSGTVGENIRFGRPNATDADVVRAAKEANCHDFVSAFPLGYDTPVGEHGRLLSGGQRQRVAIARAILKDPPLLILDEATSALTQRSERLVAEALERAMWGRTVLVIAHRLSTVRRADVVAVLEGGRITEMGSFDELMAKPEGTLQKLMD 624
+ VAL G SGAGKST A+LL RLY+P EGRV LDG DL L P+WLR VGVV QEP+LFS ++ ENIR+GRP+ATDA+V AA A+ HDF++ FP GY T VGE G LSGGQ+QRVAIARA+LKDP +L+LDEATSAL SE LV A+ R M GRT L+IAHRLSTV AD V VLEGGR+ + G+ LMA+ EG ++L++
Sbjct: 378 EAVALVGPSGAGKSTIASLLLRLYDPTEGRVLLDGRDLRDLSPAWLRRRVGVVSQEPLLFSSSIAENIRYGRPDATDAEVEAAAIAASAHDFITRFPDGYRTRVGERGAQLSGGQKQRVAIARAVLKDPQILVLDEATSALDAESEHLVQGAMSRLMQGRTTLIIAHRLSTVMGADRVLVLEGGRLAQAGTHATLMAE-EGLYRRLVE 584 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1835.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1835.3.1 >prot_P-wetherbeei_contig1835.3.1 ID=prot_P-wetherbeei_contig1835.3.1|Name=mRNA_P-wetherbeei_contig1835.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=209bp QVVALAGGSGAGKSTAAALLCRLYEPLEGRVTLDGVDLATLKPSWLRSAVback to top mRNA from alignment at P-wetherbeei_contig1835:5215..6427- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1835.3.1 ID=mRNA_P-wetherbeei_contig1835.3.1|Name=mRNA_P-wetherbeei_contig1835.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1213bp|location=Sequence derived from alignment at P-wetherbeei_contig1835:5215..6427- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1835:5215..6427- >mRNA_P-wetherbeei_contig1835.3.1 ID=mRNA_P-wetherbeei_contig1835.3.1|Name=mRNA_P-wetherbeei_contig1835.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=627bp|location=Sequence derived from alignment at P-wetherbeei_contig1835:5215..6427- (Phaeothamnion wetherbeei SAG_119_79)back to top |