mRNA_P-wetherbeei_contig18333.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18333.1.1 vs. uniprot
Match: A0A521LE44_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LE44_9HYPH) HSP 1 Score: 373 bits (958), Expect = 4.000e-128 Identity = 182/218 (83.49%), Postives = 196/218 (89.91%), Query Frame = 1
Query: 1 DVPYDPRADFTHIHLVGTFPSVLAVNASSPVMSVKELVDLARAKPGEVTYGSGGNGTMNHLVGQLLVRETGVPFTHIPYRGSAPAMNDLLGGQITALMESLPTAIGYFTSKRMRPLAVSESERAPTLPETPTFREAGFPDVVATNWFGFSAPAGIPPELAKRWEVEIAAALQSDQIKGHFDRIGIKPGTLGSEAYTALIRGELARWREVIRAGNIRAD 654
DVPYDP ADFTHIHLVGTFPSVLAVNA+SPV S K+LVD ARAKPGEVTYGSGGNGTMNHLVGQLL GV THIPYRGSAPAMNDLLGGQIT+LMESLPTA GYF+S RMRPLAVSE+ERAPTLP+ PTFREAGF DVVATNWFGFSAPAGIPPE+AKRWE EIAAAL S +IK +F R+GI+PGT+G+E YTALI+ EL RWREVIRAGNIRAD
Sbjct: 112 DVPYDPLADFTHIHLVGTFPSVLAVNATSPVTSAKQLVDQARAKPGEVTYGSGGNGTMNHLVGQLLALSAGVQLTHIPYRGSAPAMNDLLGGQITSLMESLPTAAGYFSSNRMRPLAVSEAERAPTLPDVPTFREAGFTDVVATNWFGFSAPAGIPPEIAKRWETEIAAALASAEIKANFARLGIRPGTIGAEGYTALIKSELPRWREVIRAGNIRAD 329
BLAST of mRNA_P-wetherbeei_contig18333.1.1 vs. uniprot
Match: A0A537N8V2_9PROT (Tripartite tricarboxylate transporter substrate binding protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N8V2_9PROT) HSP 1 Score: 367 bits (942), Expect = 6.970e-127 Identity = 174/218 (79.82%), Postives = 194/218 (88.99%), Query Frame = 1
Query: 1 DVPYDPRADFTHIHLVGTFPSVLAVNASSPVMSVKELVDLARAKPGEVTYGSGGNGTMNHLVGQLLVRETGVPFTHIPYRGSAPAMNDLLGGQITALMESLPTAIGYFTSKRMRPLAVSESERAPTLPETPTFREAGFPDVVATNWFGFSAPAGIPPELAKRWEVEIAAALQSDQIKGHFDRIGIKPGTLGSEAYTALIRGELARWREVIRAGNIRAD 654
DVPYDP ADF HIHLVGTFP+VLAVN SSP+ SV +L+D ARAKPGE+TYGSGGNGTMNHL GQLL R TGVP THIPYRGSAPAMNDL+GGQI+ALMESLPTAIGYF+S RMRPLAVSE +R+P+LP+TPTFREAGFP VV TNWFGFS PAGIPPE+AKRWE EI AALQS Q+K F +IG++PGTLG+E YT+LIR EL RWREVI+AGNIRAD
Sbjct: 33 DVPYDPLADFLHIHLVGTFPTVLAVNGSSPITSVAQLIDQARAKPGEITYGSGGNGTMNHLTGQLLARATGVPLTHIPYRGSAPAMNDLMGGQISALMESLPTAIGYFSSGRMRPLAVSEDQRSPSLPDTPTFREAGFPGVVTTNWFGFSTPAGIPPEIAKRWETEIGAALQSTQVKEAFAKIGVRPGTLGAEGYTSLIRSELERWREVIKAGNIRAD 250
BLAST of mRNA_P-wetherbeei_contig18333.1.1 vs. uniprot
Match: A0A259MSH2_9PROT (Uncharacterized protein n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MSH2_9PROT) HSP 1 Score: 363 bits (933), Expect = 2.370e-124 Identity = 175/218 (80.28%), Postives = 192/218 (88.07%), Query Frame = 1
Query: 1 DVPYDPRADFTHIHLVGTFPSVLAVNASSPVMSVKELVDLARAKPGEVTYGSGGNGTMNHLVGQLLVRETGVPFTHIPYRGSAPAMNDLLGGQITALMESLPTAIGYFTSKRMRPLAVSESERAPTLPETPTFREAGFPDVVATNWFGFSAPAGIPPELAKRWEVEIAAALQSDQIKGHFDRIGIKPGTLGSEAYTALIRGELARWREVIRAGNIRAD 654
DVPYDP ADFTHIHLVGTFPSVLAVN +SP+ SV+EL+++ARAKPGEVTYGSGGNGTMNHLVGQLL THIPYRGSAPAMNDL+GGQITALMESLPTA GYF SKRM+PLAVSE RAPTLP+ PTFREAGFP+VVATNWFGFSAPAG+PPE+ KRWE EIAAALQS QIK FD++GI+PGTL + YTALIR EL RWREVI+AGNIRAD
Sbjct: 110 DVPYDPLADFTHIHLVGTFPSVLAVNGTSPIGSVQELIEMARAKPGEVTYGSGGNGTMNHLVGQLLALAAKAQLTHIPYRGSAPAMNDLMGGQITALMESLPTASGYFASKRMKPLAVSEDRRAPTLPDVPTFREAGFPEVVATNWFGFSAPAGLPPEIVKRWETEIAAALQSAQIKERFDKLGIRPGTLDAAGYTALIRAELPRWREVIKAGNIRAD 327
BLAST of mRNA_P-wetherbeei_contig18333.1.1 vs. uniprot
Match: A0A1H8TQ27_9PROT (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Rhodospirillales bacterium URHD0017 TaxID=1380357 RepID=A0A1H8TQ27_9PROT) HSP 1 Score: 349 bits (896), Expect = 9.980e-119 Identity = 169/218 (77.52%), Postives = 187/218 (85.78%), Query Frame = 1
Query: 1 DVPYDPRADFTHIHLVGTFPSVLAVNASSPVMSVKELVDLARAKPGEVTYGSGGNGTMNHLVGQLLVRETGVPFTHIPYRGSAPAMNDLLGGQITALMESLPTAIGYFTSKRMRPLAVSESERAPTLPETPTFREAGFPDVVATNWFGFSAPAGIPPELAKRWEVEIAAALQSDQIKGHFDRIGIKPGTLGSEAYTALIRGELARWREVIRAGNIRAD 654
DVPYDP ADFTHIHLVGTFPSVLAVN S V +VK+LV+LAR +PGE+TYGSGGNGTMNHLVGQLL R +PFTHIPYRGSAPAMNDL+GGQI ALMESLPTAIGYF S RMRPL VSE+ER+P+LP+ PT REAGF DVVATNWFGFSA A IPPE+AKRWE EIA ALQS Q+ F +IG++PGTLG+ AYT LIR EL RW+EVIRA NIRAD
Sbjct: 110 DVPYDPLADFTHIHLVGTFPSVLAVNGGSSVTTVKQLVELARKRPGEITYGSGGNGTMNHLVGQLLARSADMPFTHIPYRGSAPAMNDLMGGQIVALMESLPTAIGYFNSGRMRPLGVSEAERSPSLPDVPTLREAGFTDVVATNWFGFSAAADIPPEIAKRWETEIATALQSAQVTEAFAKIGVRPGTLGAAAYTDLIRSELVRWKEVIRAANIRAD 327
BLAST of mRNA_P-wetherbeei_contig18333.1.1 vs. uniprot
Match: A0A512NFV2_9HYPH (MFS transporter n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NFV2_9HYPH) HSP 1 Score: 343 bits (879), Expect = 3.230e-116 Identity = 165/218 (75.69%), Postives = 187/218 (85.78%), Query Frame = 1
Query: 1 DVPYDPRADFTHIHLVGTFPSVLAVNASSPVMSVKELVDLARAKPGEVTYGSGGNGTMNHLVGQLLVRETGVPFTHIPYRGSAPAMNDLLGGQITALMESLPTAIGYFTSKRMRPLAVSESERAPTLPETPTFREAGFPDVVATNWFGFSAPAGIPPELAKRWEVEIAAALQSDQIKGHFDRIGIKPGTLGSEAYTALIRGELARWREVIRAGNIRAD 654
DVPYDP ADFTHIHLVGTFPSVLAVN S V +V++LV LA+++PGE+TYGSGGNGTMNHLVGQLL R +PFTHIPYRGSAPAMNDL+GGQI ALMESLPTAIGYF S RMRPLAVSE ER+P+LP+ PTFREAG+PDVVATNWFGFSA AGIP +AKRWE EIA ALQS Q+K F +IG++PGTLG+ YT LI+ EL RW+ VI+A NIRAD
Sbjct: 105 DVPYDPLADFTHIHLVGTFPSVLAVNGGSGVSTVQQLVALAKSRPGEITYGSGGNGTMNHLVGQLLARSADMPFTHIPYRGSAPAMNDLMGGQIVALMESLPTAIGYFNSGRMRPLAVSEDERSPSLPDIPTFREAGYPDVVATNWFGFSAAAGIPSAIAKRWETEIATALQSAQVKEAFAKIGVRPGTLGAVGYTDLIKSELVRWKGVIQAANIRAD 322
BLAST of mRNA_P-wetherbeei_contig18333.1.1 vs. uniprot
Match: UPI001AE09CA2 (tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Roseomonas TaxID=125216 RepID=UPI001AE09CA2) HSP 1 Score: 334 bits (856), Expect = 1.120e-112 Identity = 160/218 (73.39%), Postives = 182/218 (83.49%), Query Frame = 1
Query: 1 DVPYDPRADFTHIHLVGTFPSVLAVNASSPVMSVKELVDLARAKPGEVTYGSGGNGTMNHLVGQLLVRETGVPFTHIPYRGSAPAMNDLLGGQITALMESLPTAIGYFTSKRMRPLAVSESERAPTLPETPTFREAGFPDVVATNWFGFSAPAGIPPELAKRWEVEIAAALQSDQIKGHFDRIGIKPGTLGSEAYTALIRGELARWREVIRAGNIRAD 654
+VPYDP ADFTH+HLVGTFPSVL VN + P +V ELV LARA+PGE+TYGSGGNGTMNHLVGQLL R GV TH+PYRGSAPAM D++GGQI ALMESLPTA+G + RMRPLAVSE ERAP LP+ PTF EAGFP ++TNWFG SAPAGIPPE+A+RW+ EIAAAL SD +K F IG++PGTLG++ YTALIR ELARWREVIR GNIRAD
Sbjct: 108 NVPYDPLADFTHLHLVGTFPSVLVVNPAVPAQTVAELVALARARPGEITYGSGGNGTMNHLVGQLLARSAGVEITHVPYRGSAPAMTDVMGGQIPALMESLPTAMGNIRAGRMRPLAVSERERAPALPDVPTFAEAGFPAAISTNWFGISAPAGIPPEIAERWQREIAAALASDVVKERFATIGVRPGTLGADGYTALIREELARWREVIRVGNIRAD 325
BLAST of mRNA_P-wetherbeei_contig18333.1.1 vs. uniprot
Match: UPI001FCB419F (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Roseomonas sp. S08 TaxID=1750527 RepID=UPI001FCB419F) HSP 1 Score: 322 bits (826), Expect = 4.030e-108 Identity = 155/218 (71.10%), Postives = 177/218 (81.19%), Query Frame = 1
Query: 1 DVPYDPRADFTHIHLVGTFPSVLAVNASSPVMSVKELVDLARAKPGEVTYGSGGNGTMNHLVGQLLVRETGVPFTHIPYRGSAPAMNDLLGGQITALMESLPTAIGYFTSKRMRPLAVSESERAPTLPETPTFREAGFPDVVATNWFGFSAPAGIPPELAKRWEVEIAAALQSDQIKGHFDRIGIKPGTLGSEAYTALIRGELARWREVIRAGNIRAD 654
+VPYDP ADFTHIH VGTFPSVL V + +V EL+ LARA+PGE+TYGSGGNGTMNHL+GQLL R G+ F H+PYRGSAPAM D++GGQI ALMES+PTA+G RMRPLA SE+ER+P LPE PTF E GFP V +TNWFGFSAPAGIPPE+A RWE EIAAAL S Q++ F IG++PGTLG+ AYTALIR EL RWREVIRAGNIRAD
Sbjct: 108 NVPYDPLADFTHIHSVGTFPSVLIVGPNVAAANVAELIALARARPGEITYGSGGNGTMNHLIGQLLARAAGINFIHVPYRGSAPAMTDVMGGQIPALMESVPTAMGNIRGGRMRPLATSEAERSPALPEVPTFAELGFPGVTSTNWFGFSAPAGIPPEIAARWENEIAAALASPQVRERFAGIGVRPGTLGAAAYTALIREELTRWREVIRAGNIRAD 325
BLAST of mRNA_P-wetherbeei_contig18333.1.1 vs. uniprot
Match: UPI0010BFD407 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Roseomonas sp. HF4 TaxID=2562313 RepID=UPI0010BFD407) HSP 1 Score: 317 bits (811), Expect = 7.640e-106 Identity = 152/217 (70.05%), Postives = 175/217 (80.65%), Query Frame = 1
Query: 4 VPYDPRADFTHIHLVGTFPSVLAVNASSPVMSVKELVDLARAKPGEVTYGSGGNGTMNHLVGQLLVRETGVPFTHIPYRGSAPAMNDLLGGQITALMESLPTAIGYFTSKRMRPLAVSESERAPTLPETPTFREAGFPDVVATNWFGFSAPAGIPPELAKRWEVEIAAALQSDQIKGHFDRIGIKPGTLGSEAYTALIRGELARWREVIRAGNIRAD 654
VPYDP ADFTHIH VGTFPSVLAVN + SV +LV +ARA+PGEVTYGSGGNGTMNHL+GQLL R GV TH+PYRGSAPAM D++GGQI A+MESLPTA+G RMRPLA SE+ER+P LP+ PTF EAGFP V +TNWFGFSAPAGIPPE+A RWE EIAAA+ ++ ++ F IGI+PGTL + YTAL+R EL RWREVIRAGNI D
Sbjct: 109 VPYDPLADFTHIHSVGTFPSVLAVNPNVAATSVADLVAMARARPGEVTYGSGGNGTMNHLIGQLLSRAAGVELTHVPYRGSAPAMTDVMGGQIPAIMESLPTAMGNIRGGRMRPLATSEAERSPALPDVPTFAEAGFPAVTSTNWFGFSAPAGIPPEVAARWEREIAAAMAAEPVRARFATIGIRPGTLDAAGYTALVRSELDRWREVIRAGNISVD 325
BLAST of mRNA_P-wetherbeei_contig18333.1.1 vs. uniprot
Match: UPI0016695DD6 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Roseomonas lacus TaxID=287609 RepID=UPI0016695DD6) HSP 1 Score: 314 bits (805), Expect = 6.020e-105 Identity = 150/218 (68.81%), Postives = 172/218 (78.90%), Query Frame = 1
Query: 1 DVPYDPRADFTHIHLVGTFPSVLAVNASSPVMSVKELVDLARAKPGEVTYGSGGNGTMNHLVGQLLVRETGVPFTHIPYRGSAPAMNDLLGGQITALMESLPTAIGYFTSKRMRPLAVSESERAPTLPETPTFREAGFPDVVATNWFGFSAPAGIPPELAKRWEVEIAAALQSDQIKGHFDRIGIKPGTLGSEAYTALIRGELARWREVIRAGNIRAD 654
+VPYDP ADFTHIHLVGTFPSVL V + V +V EL+ LAR++PGE+TYGSGGNGTMNHL+GQLL R GV TH+PYRGSAPAM DL+GGQI ALMESLPTAIG RMRP+A SE+ER+P LP+ PTF EAG V +TNWFGFS PAGIP E+A RWE EI AAL SD ++ F IG++PGT+G+E YT LIR EL RWREVIR GNIR D
Sbjct: 107 NVPYDPLADFTHIHLVGTFPSVLIVGPNVAVANVAELLALARSRPGEITYGSGGNGTMNHLIGQLLARTAGVELTHVPYRGSAPAMTDLMGGQIPALMESLPTAIGNIRGGRMRPIATSEAERSPALPDVPTFAEAGLATVTSTNWFGFSTPAGIPSEIAARWEAEIGAALTSDAVQQRFASIGVRPGTMGAEGYTTLIRDELTRWREVIRVGNIRVD 324
BLAST of mRNA_P-wetherbeei_contig18333.1.1 vs. uniprot
Match: UPI001E3CA49C (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Roseomonas sp. OP-27 TaxID=2748667 RepID=UPI001E3CA49C) HSP 1 Score: 301 bits (771), Expect = 9.010e-100 Identity = 145/218 (66.51%), Postives = 168/218 (77.06%), Query Frame = 1
Query: 1 DVPYDPRADFTHIHLVGTFPSVLAVNASSPVMSVKELVDLARAKPGEVTYGSGGNGTMNHLVGQLLVRETGVPFTHIPYRGSAPAMNDLLGGQITALMESLPTAIGYFTSKRMRPLAVSESERAPTLPETPTFREAGFPDVVATNWFGFSAPAGIPPELAKRWEVEIAAALQSDQIKGHFDRIGIKPGTLGSEAYTALIRGELARWREVIRAGNIRAD 654
+VPYDP ADFTHIH V TFP++L V + V ++ ELV LARA+PGE+TYGSGGNGTMNHL GQLL R G+ TH+PYRGSAPAM D++ G I LMESLPTA+G + RMR +A SE ER+ TLP PTF EAGF +TNWFGFS PAG+PPE A RWE EIA AL S Q++ F +G++PGTLGS AYTALIR ELARWREVIRAGNIRAD
Sbjct: 108 NVPYDPLADFTHIHSVATFPTILIVGPNVAVATMAELVALARARPGEITYGSGGNGTMNHLTGQLLARAAGIELTHVPYRGSAPAMTDVMAGNIPVLMESLPTAMGNIQAGRMRAIAQSEPERSATLPNVPTFAEAGFAAATSTNWFGFSIPAGVPPETAARWEQEIAGALASQQVRDRFATLGVRPGTLGSAAYTALIREELARWREVIRAGNIRAD 325 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18333.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18333.1.1 >prot_P-wetherbeei_contig18333.1.1 ID=prot_P-wetherbeei_contig18333.1.1|Name=mRNA_P-wetherbeei_contig18333.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=219bp DVPYDPRADFTHIHLVGTFPSVLAVNASSPVMSVKELVDLARAKPGEVTYback to top mRNA from alignment at P-wetherbeei_contig18333:2..658+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18333.1.1 ID=mRNA_P-wetherbeei_contig18333.1.1|Name=mRNA_P-wetherbeei_contig18333.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=657bp|location=Sequence derived from alignment at P-wetherbeei_contig18333:2..658+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18333:2..658+ >mRNA_P-wetherbeei_contig18333.1.1 ID=mRNA_P-wetherbeei_contig18333.1.1|Name=mRNA_P-wetherbeei_contig18333.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=657bp|location=Sequence derived from alignment at P-wetherbeei_contig18333:2..658+ (Phaeothamnion wetherbeei SAG_119_79)back to top |