mRNA_P-wetherbeei_contig1833.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1833.1.1
Unique NamemRNA_P-wetherbeei_contig1833.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1833.1.1 vs. uniprot
Match: K9RGD0_9CYAN (Putative membrane-associated Zn-dependent protease n=1 Tax=Rivularia sp. PCC 7116 TaxID=373994 RepID=K9RGD0_9CYAN)

HSP 1 Score: 70.9 bits (172), Expect = 2.640e-11
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 1 
Query:    1 FACLKLLHEAGHLLVAGEEGVAIATPLTLPSVEASHPGTALHRLESYPRCRGVLCDLALAGPAFGGLCSLAAFLWGLFLTAQADTAALEVFPRLPAGFLDHSLLIGLATNLFLPHYISA 357
            F  + L HE GH ++A   GV ++ P  LPSV+    G A+ R ES    R  L D+ALAGPA GG+ S    + GL L+ +        F +LP  F   S+L+G+   +FL + + +
Sbjct:  260 FFTVLLAHEVGHRVIADRHGVKLSLPYLLPSVQIGSFG-AITRFESLLPNRKALFDIALAGPAVGGIVSFLMLILGLLLSHEGS------FFQLPNEFFQGSILVGILARVFLGNTLQS 371
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BLAST of mRNA_P-wetherbeei_contig1833.1.1 vs. uniprot
Match: A0A8K2A7F8_9CYAN (Site-2 protease family protein n=1 Tax=Petrachloros mirabilis ULC683 TaxID=2781853 RepID=A0A8K2A7F8_9CYAN)

HSP 1 Score: 65.5 bits (158), Expect = 1.960e-9
Identity = 39/110 (35.45%), Postives = 60/110 (54.55%), Query Frame = 1 
Query:   10 LKLLHEAGHLLVAGEEGVAIATPLTLPSVEASHPGTALHRLESYPRCRGVLCDLALAGPAFGGLCSLAAFLWGLFLTAQADTAALEVFPRLPAGFLDHSLLIGLATNLFL 339
            + + HE GH ++A   GV  + P  +P+++    G AL+R ES    R VL D+ALAGPA GG+ SL   ++GL L+        E   ++P  F   S+L+G  + + L
Sbjct:  256 ILIFHEVGHQVLARRHGVKFSLPFLIPALQIGSFG-ALNRFESLVPNRKVLFDVALAGPAVGGIVSLVLLVFGLLLSTS------ESLFQVPTLFFQSSILVGTLSRVVL 358
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BLAST of mRNA_P-wetherbeei_contig1833.1.1 vs. uniprot
Match: A0A218QQ11_9CYAN (Peptidase M50 n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A218QQ11_9CYAN)

HSP 1 Score: 64.3 bits (155), Expect = 4.930e-9
Identity = 40/110 (36.36%), Postives = 58/110 (52.73%), Query Frame = 1 
Query:   10 LKLLHEAGHLLVAGEEGVAIATPLTLPSVEASHPGTALHRLESYPRCRGVLCDLALAGPAFGGLCSLAAFLWGLFLTAQADTAALEVFPRLPAGFLDHSLLIGLATNLFL 339
            + L+HE GH L+A    + ++ P  LP+V+    G A+ R ES    R VL D+A+AGPA GG+ SL   + GL L+ Q          +LP  F   S+L+G    + L
Sbjct:  261 ILLIHELGHWLLARHHQIRLSLPFFLPAVQIGSFG-AITRFESLLPNRKVLFDIAIAGPAAGGIASLVTLIIGLLLSHQGSLF------QLPNEFFQGSILVGSLARIIL 363
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BLAST of mRNA_P-wetherbeei_contig1833.1.1 vs. uniprot
Match: A0A2P8W683_9CYAN (Site-2 protease family protein n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A2P8W683_9CYAN)

HSP 1 Score: 64.3 bits (155), Expect = 4.940e-9
Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 1 
Query:   10 LKLLHEAGHLLVAGEEGVAIATPLTLPSVEASHPGTALHRLESYPRCRGVLCDLALAGPAFGGLCSLAAFLWGLFLTAQADTAALEVFPRLPAGFLDHSLLIGLATNLFL 339
            + + HEAGH + A    + ++ P  +P+ +    G+ L R ES    R VL D+ALAGPA GGL SLA  L GL L+            ++P+GF   S+LIG    + L
Sbjct:  261 ILVAHEAGHWVTARRYNIRLSPPFLIPAWQIGAFGS-LTRFESLLPNRSVLFDIALAGPAAGGLVSLAMLLGGLLLSHPGSAF------QIPSGFFQGSILIGALARVVL 363
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BLAST of mRNA_P-wetherbeei_contig1833.1.1 vs. uniprot
Match: A0A2W4WN09_9CYAN (Site-2 protease family protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A2W4WN09_9CYAN)

HSP 1 Score: 64.3 bits (155), Expect = 4.960e-9
Identity = 41/116 (35.34%), Postives = 61/116 (52.59%), Query Frame = 1 
Query:   10 LKLLHEAGHLLVAGEEGVAIATPLTLPSVEASHPGTALHRLESYPRCRGVLCDLALAGPAFGGLCSLAAFLWGLFLTAQADTAALEVFPRLPAGFLDHSLLIGLATNLFLPHYISA 357
            + + HEAGH + A   GV ++ P  +P+ +    G+ L R ES    R VL D+A+AGPA GG+ SLA  + GL L+            ++P+GF   S+LIG    + L   + A
Sbjct:  268 ILVAHEAGHWVAARRYGVRLSPPFLIPAWQIGAFGS-LTRFESLLPNRSVLFDIAVAGPAAGGIVSLAMLVGGLLLSHPGSAF------QIPSGFFQGSVLIGALARVTLGDVLQA 376
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BLAST of mRNA_P-wetherbeei_contig1833.1.1 vs. uniprot
Match: UPI0002DE6582 (site-2 protease family protein n=1 Tax=Nodosilinea nodulosa TaxID=416001 RepID=UPI0002DE6582)

HSP 1 Score: 63.9 bits (154), Expect = 6.710e-9
Identity = 41/110 (37.27%), Postives = 57/110 (51.82%), Query Frame = 1 
Query:   10 LKLLHEAGHLLVAGEEGVAIATPLTLPSVEASHPGTALHRLESYPRCRGVLCDLALAGPAFGGLCSLAAFLWGLFLTAQADTAALEVFPRLPAGFLDHSLLIGLATNLFL 339
            + + HEAGH   A    + ++ P  +P+ +    G+ L R ES    R VL D+ALAGPA GGL SLA  + GL L+            ++PAGF   S+LIG    + L
Sbjct:  261 ILIAHEAGHWTTARRYNIRLSPPFLIPAWQIGAFGS-LTRFESLLPNRSVLFDIALAGPAAGGLVSLAMLVGGLLLSHPGSAF------QIPAGFFQGSILIGALARVVL 363
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BLAST of mRNA_P-wetherbeei_contig1833.1.1 vs. uniprot
Match: A0A2W6YVE7_9CYAN (Site-2 protease family protein n=8 Tax=Cyanobacteria TaxID=1117 RepID=A0A2W6YVE7_9CYAN)

HSP 1 Score: 63.5 bits (153), Expect = 9.120e-9
Identity = 41/116 (35.34%), Postives = 60/116 (51.72%), Query Frame = 1 
Query:   10 LKLLHEAGHLLVAGEEGVAIATPLTLPSVEASHPGTALHRLESYPRCRGVLCDLALAGPAFGGLCSLAAFLWGLFLTAQADTAALEVFPRLPAGFLDHSLLIGLATNLFLPHYISA 357
            + L HE GH + A   GV ++ P  +P+ +    G+ L R ES    R VL D++LAGPA GG+ SLA  + GL L+            ++P+GF   S+LIG    + L   + A
Sbjct:  259 ILLSHETGHWIAARRYGVRLSPPFFIPAWQIGAFGS-LTRFESLLANRSVLFDISLAGPAAGGIVSLAMLVSGLLLSHPGSAF------QIPSGFFQGSVLIGALAKVVLGSALQA 367
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BLAST of mRNA_P-wetherbeei_contig1833.1.1 vs. uniprot
Match: A0A8J7F8D2_9CYAN (Site-2 protease family protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J7F8D2_9CYAN)

HSP 1 Score: 63.2 bits (152), Expect = 1.240e-8
Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 1 
Query:    1 FACLKLLHEAGHLLVAGEEGVAIATPLTLPSVEASHPGTALHRLESYPRCRGVLCDLALAGPAFGGLCSLAAFLWGLFLTAQADTAALEVFPRLPAGFLDHSLLIG 318
            F  + + HE GH ++A    V ++ P  LPSV+    G A+ R ES    R VL D+ALAGPA GG+ S    + GL L+ Q          +LP  F   S+L+G
Sbjct:  260 FLTILIAHELGHWIIARRHQVKLSLPYLLPSVQIGSFG-AITRFESLLPNRKVLFDIALAGPAVGGIVSFTMLIIGLLLSHQGSLF------QLPNQFFQGSILVG 358
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BLAST of mRNA_P-wetherbeei_contig1833.1.1 vs. uniprot
Match: UPI0019E3C7C0 (Site-2 protease family protein n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019E3C7C0)

HSP 1 Score: 63.2 bits (152), Expect = 1.240e-8
Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 1 
Query:   10 LKLLHEAGHLLVAGEEGVAIATPLTLPSVEASHPGTALHRLESYPRCRGVLCDLALAGPAFGGLCSLAAFLWGLFLTAQADTAALEVFPRLPAGFLDHSLLIGLATNLFLPHYIS 354
            + ++HE GH  +A + GV ++ P  LP+ +    G AL R ES    R VL D+A AGPA GGL SLA    GL L+    T       ++PA F   S L+G      L + +S
Sbjct:  265 ILIVHELGHWAIARQNGVKLSWPFFLPTWQIGAFG-ALTRFESVLPNRSVLFDVAFAGPAAGGLLSLAMLFVGLVLSHPGSTF------QIPAEFFQGSALVGALAKGVLGNALS 372
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BLAST of mRNA_P-wetherbeei_contig1833.1.1 vs. uniprot
Match: B5W5K4_LIMMA (Peptidase M50 n=5 Tax=Oscillatoriales TaxID=1150 RepID=B5W5K4_LIMMA)

HSP 1 Score: 62.8 bits (151), Expect = 1.690e-8
Identity = 41/106 (38.68%), Postives = 55/106 (51.89%), Query Frame = 1 
Query:   22 HEAGHLLVAGEEGVAIATPLTLPSVEASHPGTALHRLESYPRCRGVLCDLALAGPAFGGLCSLAAFLWGLFLTAQADTAALEVFPRLPAGFLDHSLLIGLATNLFL 339
            HE  H ++A    V  + P  +P+V+    G A +R ES    R VL D+ALAGPA GGL SL   L GL L+ Q          ++P  F   S+L+GL + L L
Sbjct:  269 HEIAHQVIANRHQVKFSLPFFIPTVQIGTFG-AFNRFESLLPNRKVLFDVALAGPAAGGLLSLLMLLAGLILSHQGSLF------QVPTSFFQGSVLVGLLSKLIL 367
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1833.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K9RGD0_9CYAN2.640e-1136.13Putative membrane-associated Zn-dependent protease... [more]
A0A8K2A7F8_9CYAN1.960e-935.45Site-2 protease family protein n=1 Tax=Petrachloro... [more]
A0A218QQ11_9CYAN4.930e-936.36Peptidase M50 n=3 Tax=Cyanobacteria TaxID=1117 Rep... [more]
A0A2P8W683_9CYAN4.940e-937.27Site-2 protease family protein n=5 Tax=Cyanobacter... [more]
A0A2W4WN09_9CYAN4.960e-935.34Site-2 protease family protein n=2 Tax=Pseudanabae... [more]
UPI0002DE65826.710e-937.27site-2 protease family protein n=1 Tax=Nodosilinea... [more]
A0A2W6YVE7_9CYAN9.120e-935.34Site-2 protease family protein n=8 Tax=Cyanobacter... [more]
A0A8J7F8D2_9CYAN1.240e-837.74Site-2 protease family protein n=2 Tax=Cyanobacter... [more]
UPI0019E3C7C01.240e-837.39Site-2 protease family protein n=1 Tax=Leptolyngby... [more]
B5W5K4_LIMMA1.690e-838.68Peptidase M50 n=5 Tax=Oscillatoriales TaxID=1150 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1833contigP-wetherbeei_contig1833:1138..1905 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LMD3
Preferred nameEGY1
PFAMsPeptidase_M50
Model size487
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006508,GO:0006807,GO:0006950,GO:0006970,GO:0006996,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009314,GO:0009416,GO:0009507,GO:0009536,GO:0009605,GO:0009606,GO:0009628,GO:0009629,GO:0009630,GO:0009651,GO:0009657,GO:0009658,GO:0009668,GO:0009719,GO:0009723,GO:0009725,GO:0009959,GO:0009987,GO:0010027,GO:0010033,GO:0010207,GO:0015979,GO:0016043,GO:0016787,GO:0019538,GO:0019684,GO:0022607,GO:0034622,GO:0042221,GO:0043157,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0048564,GO:0050896,GO:0060359,GO:0061024,GO:0065003,GO:0070011,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1901698
Exons3
Evalue3.85e-17
EggNOG OGsCOG0750@1|root,2QUAP@2759|Eukaryota
Descriptionresponse to cation stress
Cds size486
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186142.9682174-CDS-P-wetherbeei_contig1833:1137..12361683186142.9682174-CDS-P-wetherbeei_contig1833:1137..1236Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1833 1138..1236 +
1683186142.9785867-CDS-P-wetherbeei_contig1833:1428..16851683186142.9785867-CDS-P-wetherbeei_contig1833:1428..1685Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1833 1429..1685 +
1683186142.9876392-CDS-P-wetherbeei_contig1833:1774..19041683186142.9876392-CDS-P-wetherbeei_contig1833:1774..1904Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1833 1775..1904 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1833.1.1prot_P-wetherbeei_contig1833.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1833 1138..1904 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1833.1.1

>prot_P-wetherbeei_contig1833.1.1 ID=prot_P-wetherbeei_contig1833.1.1|Name=mRNA_P-wetherbeei_contig1833.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp
FACLKLLHEAGHLLVAGEEGVAIATPLTLPSVEASHPGTALHRLESYPRC
RGVLCDLALAGPAFGGLCSLAAFLWGLFLTAQADTAALEVFPRLPAGFLD
HSLLIGLATNLFLPHYISAGGDGGGASPVGGGGAVRDAGERAATAAVRGH
GRRGGGQEHVGQ
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mRNA from alignment at P-wetherbeei_contig1833:1138..1905+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1833.1.1 ID=mRNA_P-wetherbeei_contig1833.1.1|Name=mRNA_P-wetherbeei_contig1833.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig1833:1138..1905+ (Phaeothamnion wetherbeei SAG_119_79)
TTTGCCTGCCTCAAGCTGCTGCACGAGGCGGGCCACCTGCTCGTCGCGGG
GGAGGAGGGCGTCGCGATTGCCACGCCGCTAACCCTGCCATCCGTCGAGG
TCAGTATGCCATTTACGGCACGCTCTCCCTGCCTTCCATCTCTATCTCCA
TAGGCCTATTCGGCGCGCGGCACCTTTCCCTTCGCGCAGGGGGTTTGTCA
GCTGGCTGTTGAACGAAGAAGGCACCGTTCGTCCCCAGGGTACGCTCACC
TTTGCTCCTCTGCCGCCCTTCGCCGCCTGTTCCCGCAATAGGCGAGCCAC
CCAGGGACGGCCCTCCACCGGCTGGAGAGCTACCCGCGCTGCCGCGGCGT
GCTCTGCGACCTCGCTCTGGCGGGGCCGGCGTTCGGCGGCCTCTGCTCCC
TGGCCGCCTTCCTTTGGGGCCTCTTTTTGACGGCGCAAGCCGACACGGCC
GCGCTTGAAGTCTTCCCGCGCCTCCCGGCTGGTTTTCTGGACCACAGCCT
CCTGATCGGCCTCGCGACCAACCTGTTCCTGCCGCATTACATCTCGGCGT
CGGCCGGGGACGCGGCGGCGGCCGTCGCCACCGCAGCAGGCGCAGCCGGT
GCGGCTGGGGGCGGCGTGGGGATTGCTGACGCGGCAGCGGCGGTGACGGT
GGTGGCGCTTCACCCGTTGGCGGTGGCGGGGCTGTTCGGGACGCTGGCGA
ACGCGCTGCAACTGCTGCCGTTCGGGGACACGGACGGCGCGGTGGCGGTC
AAGAGCACGTTGGGCAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1833:1138..1905+

>mRNA_P-wetherbeei_contig1833.1.1 ID=mRNA_P-wetherbeei_contig1833.1.1|Name=mRNA_P-wetherbeei_contig1833.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig1833:1138..1905+ (Phaeothamnion wetherbeei SAG_119_79)
TTTGCCTGCCTCAAGCTGCTGCACGAGGCGGGCCACCTGCTCGTCGCGGG
GGAGGAGGGCGTCGCGATTGCCACGCCGCTAACCCTGCCATCCGTCGAGG
CGAGCCACCCAGGGACGGCCCTCCACCGGCTGGAGAGCTACCCGCGCTGC
CGCGGCGTGCTCTGCGACCTCGCTCTGGCGGGGCCGGCGTTCGGCGGCCT
CTGCTCCCTGGCCGCCTTCCTTTGGGGCCTCTTTTTGACGGCGCAAGCCG
ACACGGCCGCGCTTGAAGTCTTCCCGCGCCTCCCGGCTGGTTTTCTGGAC
CACAGCCTCCTGATCGGCCTCGCGACCAACCTGTTCCTGCCGCATTACAT
CTCGGCCGGCGGTGACGGTGGTGGCGCTTCACCCGTTGGCGGTGGCGGGG
CTGTTCGGGACGCTGGCGAACGCGCTGCAACTGCTGCCGTTCGGGGACAC
GGACGGCGCGGTGGCGGTCAAGAGCACGTTGGGCAG
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