mRNA_P-wetherbeei_contig18304.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18304.1.1
Unique NamemRNA_P-wetherbeei_contig18304.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig18304.1.1 vs. uniprot
Match: D8LL48_ECTSI (Dihydrolipoamide dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL48_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 8.530e-87
Identity = 144/180 (80.00%), Postives = 156/180 (86.67%), Query Frame = 1 
Query:    1 LHTQT-GLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQDGEHLKSLGISVPGGVEFDRAGVAAHAKNLASRVKANLEGSLKALGVTVVDAKGELTGAHTVKLQGTSETVTAKDIILAPGSVPFVPPGVQADEKTVFTSDGGLNLAFVPEYVAIIGSGYIGLEFSDVYTALGAEV 537
            LH ++ GLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQD  HL  +GI V  GVE+DRAGVAAHAKNLAS+VK  LEGSLK LGV V+DA GEL GA+T+K   T +T TAKDIILAPGS+PFVPPGVQAD KTVFTSD  L+LAFVPEY AI+GSGYIGLEFSDVYTALGAEV
Sbjct:   85 LHARSCGLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQDDHHLDGMGIKVS-GVEYDRAGVAAHAKNLASKVKGGLEGSLKTLGVEVIDATGELAGANTIKAVETGKTFTAKDIILAPGSLPFVPPGVQADGKTVFTSDEALDLAFVPEYAAIVGSGYIGLEFSDVYTALGAEV 263
[Close]
BLAST of mRNA_P-wetherbeei_contig18304.1.1 vs. uniprot
Match: A0A835ZEH5_9STRA (Dihydrolipoamide dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEH5_9STRA)

HSP 1 Score: 270 bits (690), Expect = 1.170e-85
Identity = 143/180 (79.44%), Postives = 154/180 (85.56%), Query Frame = 1 
Query:    1 LHTQT-GLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQDGEHLKSLGISVPGGVEFDRAGVAAHAKNLASRVKANLEGSLKALGVTVVDAKGELTGAHTVKLQGTSETVTAKDIILAPGSVPFVPPGVQADEKTVFTSDGGLNLAFVPEYVAIIGSGYIGLEFSDVYTALGAEV 537
            LH +  GLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVR+MQ+  HL+ LGI+V G V+FDR  VA HAKNLASRV+ NLE SLK LGV V++  GEL  AHTVK  G S   TAKDIILAPGS+PFVPPGVQADEKTVFTSDGGLNL FVPEYVAI+GSGYIGLEFSDVYTALGAEV
Sbjct:   67 LHARACGLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVRDMQNEHHLEGLGITVDGEVKFDRQAVADHAKNLASRVRGNLEASLKGLGVDVIEDAGELVRAHTVK--GASREYTAKDIILAPGSLPFVPPGVQADEKTVFTSDGGLNLEFVPEYVAIVGSGYIGLEFSDVYTALGAEV 244
[Close]
BLAST of mRNA_P-wetherbeei_contig18304.1.1 vs. uniprot
Match: W7TT47_9STRA (Dihydrolipoamide dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT47_9STRA)

HSP 1 Score: 263 bits (671), Expect = 1.330e-82
Identity = 137/180 (76.11%), Postives = 153/180 (85.00%), Query Frame = 1 
Query:    1 LHTQT-GLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQDGEHLKSLGISVPGGVEFDRAGVAAHAKNLASRVKANLEGSLKALGVTVVDAKGELTGAHTVKLQGTSETVTAKDIILAPGSVPFVPPGVQADEKTVFTSDGGLNLAFVPEYVAIIGSGYIGLEFSDVYTALGAEV 537
            LH ++ GLKTAVFSG+DVGGTCVNRGCVPSKALLAA+GRVREM+D  HLK+LGISV G + +DRA VAAHA NLA++VK NLE SLKALGV V++AKG L G H  K+ G  +  TAKDIILAPGS+PFVPPGV  DEKTVFTSDGGL L  VPEYVAIIGSGYIGLEFSDVYTALG+EV
Sbjct:   83 LHARSEGLKTAVFSGRDVGGTCVNRGCVPSKALLAASGRVREMKDAHHLKALGISVEGDITYDRASVAAHAANLANKVKGNLENSLKALGVEVIEAKGVLAGPH--KVMGDGKVFTAKDIILAPGSLPFVPPGVTCDEKTVFTSDGGLRLERVPEYVAIIGSGYIGLEFSDVYTALGSEV 260
[Close]
BLAST of mRNA_P-wetherbeei_contig18304.1.1 vs. uniprot
Match: A0A7R9Y8E4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8E4_9STRA)

HSP 1 Score: 254 bits (649), Expect = 2.020e-79
Identity = 128/180 (71.11%), Postives = 156/180 (86.67%), Query Frame = 1 
Query:    1 LHTQT-GLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQDGEHLKSLGISVPGGVEFDRAGVAAHAKNLASRVKANLEGSLKALGVTVVDAKGELTGAHTVKLQGTSETVTAKDIILAPGSVPFVPPGVQADEKTVFTSDGGLNLAFVPEYVAIIGSGYIGLEFSDVYTALGAEV 537
            LH  + GLK AV +G DVGGTCVNRGCVPSKALLAA+GRVRE+QD +HLKSLGIS+ G VEFDRA +AAHA+NLA++V +NLE SLK LG+ ++  + ++ GA TV+L+G  +TVTAKD+ILAPGS+PFVPPG++ DEKTVFTSDGGLNL  VP++VAI+GSGYIGLEFSDVYTALG+EV
Sbjct:   75 LHAHSKGLKVAVATGGDVGGTCVNRGCVPSKALLAASGRVRELQDEKHLKSLGISL-GDVEFDRAAIAAHARNLANKVASNLENSLKGLGIEILPYRAKVAGARTVELEGAGKTVTAKDVILAPGSLPFVPPGIEVDEKTVFTSDGGLNLESVPQWVAIVGSGYIGLEFSDVYTALGSEV 253
[Close]
BLAST of mRNA_P-wetherbeei_contig18304.1.1 vs. uniprot
Match: A0A1Z5JDE5_FISSO (Dihydrolipoamide dehydrogenase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDE5_FISSO)

HSP 1 Score: 252 bits (643), Expect = 1.150e-78
Identity = 130/181 (71.82%), Postives = 151/181 (83.43%), Query Frame = 1 
Query:    1 LHTQT-GLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQDGEHLKSLGISVPGGVEFDRAGVAAHAKNLASRVKANLEGSLKALGVTVVDAKGELTG-AHTVKLQGTSETVTAKDIILAPGSVPFVPPGVQADEKTVFTSDGGLNLAFVPEYVAIIGSGYIGLEFSDVYTALGAEV 537
            LH +  GL+TAVFSG D+GGTCVNRGCVPSKALLAA+GRVREM++ EHLKSLGI+V G V++DR G+A HA NLA+RVK NLE SL  LGV V++ +G LTG AH VK + T +  T KDIILAPGSVPFVPPG+  DEKTVFTSDG L L +VPE+VAI+GSGYIGLEFSDVYTALG+EV
Sbjct:   58 LHARAQGLETAVFSGADIGGTCVNRGCVPSKALLAASGRVREMKNDEHLKSLGITVEGEVKYDRQGIADHATNLANRVKGNLEASLVGLGVQVIEGRGSLTGNAHEVKDEATGKIYTFKDIILAPGSVPFVPPGITVDEKTVFTSDGALKLPYVPEWVAIVGSGYIGLEFSDVYTALGSEV 238
[Close]
BLAST of mRNA_P-wetherbeei_contig18304.1.1 vs. uniprot
Match: A0A7S2GNU0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GNU0_9STRA)

HSP 1 Score: 251 bits (641), Expect = 2.530e-78
Identity = 130/178 (73.03%), Postives = 151/178 (84.83%), Query Frame = 1 
Query:    4 HTQTGLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQDGEHLKSLGISVPGGVEFDRAGVAAHAKNLASRVKANLEGSLKALGVTVVDAKGELTGAHTVKLQGTSETVTAKDIILAPGSVPFVPPGVQADEKTVFTSDGGLNLAFVPEYVAIIGSGYIGLEFSDVYTALGAEV 537
            H+Q GLKTAVFSG DVGGTCVNRGCVPSKALLAA+GRVREMQD  HL + G+ V  GV F+R  +AAHA++LA +VK+NL+ SL + G+ +++A GE+   HTV L GT ET TAKDIILAPGSVPFVPPGVQADEKTVFTSDGGL L ++PE+VAIIGSGYIGLEFSDVYTALG+EV
Sbjct:   69 HSQ-GLKTAVFSGGDVGGTCVNRGCVPSKALLAASGRVREMQDEGHLSNFGVKVE-GVTFEREKIAAHAQDLADKVKSNLQMSLTSKGIELIEAAGEIVAPHTVSLVGTGETKTAKDIILAPGSVPFVPPGVQADEKTVFTSDGGLKLQYLPEWVAIIGSGYIGLEFSDVYTALGSEV 244
[Close]
BLAST of mRNA_P-wetherbeei_contig18304.1.1 vs. uniprot
Match: A0A7S4K9L4_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K9L4_9STRA)

HSP 1 Score: 251 bits (641), Expect = 2.870e-78
Identity = 130/181 (71.82%), Postives = 151/181 (83.43%), Query Frame = 1 
Query:    1 LHTQT-GLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQDGEHLKSLGISVPGGVEFDRAGVAAHAKNLASRVKANLEGSLKALGVTVVDAKGELTG-AHTVKLQGTSETVTAKDIILAPGSVPFVPPGVQADEKTVFTSDGGLNLAFVPEYVAIIGSGYIGLEFSDVYTALGAEV 537
            LH++  GLKTAVF+G+DVGGTCVNRGCVPSKALLAA+GRVR+M++  HL S+GI V G VEFDR G+A HAKNLAS+VK NLE SL ALG  V++ +G LT  AH VK + T +  TAKD+ILAPGS+PFVPPGV  DEKTV+TSDG L L FVPE+VAIIGSGYIGLEFSDVYTALG+EV
Sbjct:   68 LHSRAQGLKTAVFAGEDVGGTCVNRGCVPSKALLAASGRVRDMKNAGHLDSMGIKVEGEVEFDRQGIADHAKNLASKVKGNLENSLVALGCDVIEGRGSLTSTAHEVKDEKTGKVYTAKDVILAPGSIPFVPPGVTVDEKTVYTSDGALELQFVPEWVAIIGSGYIGLEFSDVYTALGSEV 248
[Close]
BLAST of mRNA_P-wetherbeei_contig18304.1.1 vs. uniprot
Match: A0A6U3XDJ0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3XDJ0_9STRA)

HSP 1 Score: 251 bits (640), Expect = 5.680e-78
Identity = 131/181 (72.38%), Postives = 151/181 (83.43%), Query Frame = 1 
Query:    1 LHTQT-GLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQDGEHLKSLGISVPGGVEFDRAGVAAHAKNLASRVKANLEGSLKALGVTVVDAKGELTG-AHTVKLQGTSETVTAKDIILAPGSVPFVPPGVQADEKTVFTSDGGLNLAFVPEYVAIIGSGYIGLEFSDVYTALGAEV 537
            LH++   LKTAVF+G DVGGTCVNRGCVPSKALLAA+GRVR+M+D  HL  LGI+V G V +DR G+AAHAKNLA+RVK NLE SL ALGV VV+ +G LTG A+ VK + T +  TAKDIILAPGS+PFVPPG+  DEKTVFTSDG L L +VPE+VAIIGSGYIGLEFSDVYTALG+EV
Sbjct:   82 LHSRAQSLKTAVFAGGDVGGTCVNRGCVPSKALLAASGRVRDMKDAAHLSDLGIAVEGDVTYDREGIAAHAKNLANRVKGNLENSLIALGVDVVEGRGVLTGNANEVKDEATGKVYTAKDIILAPGSIPFVPPGITVDEKTVFTSDGALELPYVPEWVAIIGSGYIGLEFSDVYTALGSEV 262
[Close]
BLAST of mRNA_P-wetherbeei_contig18304.1.1 vs. uniprot
Match: A0A7S2LM98_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LM98_9STRA)

HSP 1 Score: 248 bits (634), Expect = 4.160e-77
Identity = 130/181 (71.82%), Postives = 149/181 (82.32%), Query Frame = 1 
Query:    1 LHTQT-GLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQDGEHLKSLGISVPGGVEFDRAGVAAHAKNLASRVKANLEGSLKALGVTVVDAKGELTG-AHTVKLQGTSETVTAKDIILAPGSVPFVPPGVQADEKTVFTSDGGLNLAFVPEYVAIIGSGYIGLEFSDVYTALGAEV 537
            LH++   L TAVFSG DVGGTCVNRGCVPSKALLAA+GRVREM+D  HL   GI V G V++DRAGVAAHAK LA++VK NLEGSL ALGV +V+ +G LTG AH VK + + +  TAKDIILAPGS+PFVPPGV  DEKTV+TSDG L L  VPE+VAI+GSGYIGLEFSDVYTALG+EV
Sbjct:   79 LHSRAQDLTTAVFSGNDVGGTCVNRGCVPSKALLAASGRVREMRDSAHLSEFGIEVEGEVKYDRAGVAAHAKQLANKVKGNLEGSLVALGVDIVEGRGVLTGTAHEVKDESSGKVYTAKDIILAPGSIPFVPPGVTVDEKTVYTSDGALELNSVPEWVAIVGSGYIGLEFSDVYTALGSEV 259
[Close]
BLAST of mRNA_P-wetherbeei_contig18304.1.1 vs. uniprot
Match: A0A7S2ESP6_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ESP6_TRICV)

HSP 1 Score: 248 bits (632), Expect = 6.340e-77
Identity = 131/181 (72.38%), Postives = 149/181 (82.32%), Query Frame = 1 
Query:    1 LHTQT-GLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQDGEHLKSLGISVPGGVEFDRAGVAAHAKNLASRVKANLEGSLKALGVTVVDAKGELTG-AHTVKLQGTSETVTAKDIILAPGSVPFVPPGVQADEKTVFTSDGGLNLAFVPEYVAIIGSGYIGLEFSDVYTALGAEV 537
            LH++  GLKTAVF+G DVGGTCVNRGCVPSKALLAA+GRVR+M++  HL S+GI + G V FDR G+AAHA NLASRVK NLE SL ALG  VV+ +G LTG AH V  Q T +  TAKDIILAPGS+PFVPPGV  DEKTV+TSDG L L +VPE+VAIIGSGYIGLEFSDVYTALG+EV
Sbjct:   67 LHSRAQGLKTAVFAGGDVGGTCVNRGCVPSKALLAASGRVRDMKNDHHLDSMGIKLEGEVTFDREGIAAHAANLASRVKGNLENSLIALGCDVVEGRGALTGKAHEVLDQKTGKVYTAKDIILAPGSIPFVPPGVTVDEKTVYTSDGALELQYVPEWVAIIGSGYIGLEFSDVYTALGSEV 247
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18304.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL48_ECTSI8.530e-8780.00Dihydrolipoamide dehydrogenase n=2 Tax=Ectocarpus ... [more]
A0A835ZEH5_9STRA1.170e-8579.44Dihydrolipoamide dehydrogenase n=1 Tax=Tribonema m... [more]
W7TT47_9STRA1.330e-8276.11Dihydrolipoamide dehydrogenase n=2 Tax=Monodopsida... [more]
A0A7R9Y8E4_9STRA2.020e-7971.11Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A1Z5JDE5_FISSO1.150e-7871.82Dihydrolipoamide dehydrogenase n=2 Tax=Fistulifera... [more]
A0A7S2GNU0_9STRA2.530e-7873.03Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4K9L4_9STRA2.870e-7871.82Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A6U3XDJ0_9STRA5.680e-7872.38Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2LM98_9STRA4.160e-7771.82Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2ESP6_TRICV6.340e-7772.38Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18304contigP-wetherbeei_contig18304:664..1200 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LL48
Preferred nameDLD2
PFAMsPyr_redox_2,Pyr_redox_dim
Model size537
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00022,RC00583,RC02742,RC02833,RC02834
KEGG koko:K00382
KEGG ReactionR00209,R01221,R01698,R03815,R07618,R08549
KEGG Pathwayko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00009,M00011,M00036,M00307,M00532
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032787,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0042221,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046390,GO:0046483,GO:0046685,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons1
Evalue1.4e-87
EggNOG OGsCOG1249@1|root,KOG1335@2759|Eukaryota
EC1.8.1.4
Descriptiondihydrolipoyl dehydrogenase activity
Cds size537
COG categoryC
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186142.2083375-CDS-P-wetherbeei_contig18304:663..12001683186142.2083375-CDS-P-wetherbeei_contig18304:663..1200Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18304 664..1200 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18304.1.1prot_P-wetherbeei_contig18304.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18304 664..1200 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18304.1.1

>prot_P-wetherbeei_contig18304.1.1 ID=prot_P-wetherbeei_contig18304.1.1|Name=mRNA_P-wetherbeei_contig18304.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp
LHTQTGLKTAVFSGKDVGGTCVNRGCVPSKALLAAAGRVREMQDGEHLKS
LGISVPGGVEFDRAGVAAHAKNLASRVKANLEGSLKALGVTVVDAKGELT
GAHTVKLQGTSETVTAKDIILAPGSVPFVPPGVQADEKTVFTSDGGLNLA
FVPEYVAIIGSGYIGLEFSDVYTALGAEV
back to top

mRNA from alignment at P-wetherbeei_contig18304:664..1200-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18304.1.1 ID=mRNA_P-wetherbeei_contig18304.1.1|Name=mRNA_P-wetherbeei_contig18304.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig18304:664..1200- (Phaeothamnion wetherbeei SAG_119_79)
CTGCACACGCAAACAGGCCTCAAGACGGCCGTCTTCTCCGGGAAGGACGT
CGGGGGCACGTGCGTGAACCGCGGCTGCGTGCCCTCCAAGGCACTCCTCG
CCGCTGCCGGCCGTGTACGTGAAATGCAGGATGGCGAGCACCTCAAGTCC
CTCGGCATCTCCGTGCCCGGCGGCGTCGAGTTCGACCGCGCTGGAGTCGC
CGCACACGCTAAGAACCTGGCGAGCCGCGTCAAGGCCAACCTGGAAGGGT
CGCTCAAGGCGCTGGGGGTGACGGTTGTCGACGCCAAGGGCGAGCTGACC
GGTGCGCACACGGTCAAGCTCCAGGGCACCTCCGAAACCGTCACCGCCAA
GGATATTATTTTGGCGCCGGGGTCGGTGCCGTTCGTGCCCCCGGGGGTAC
AGGCAGACGAGAAGACAGTCTTTACATCGGACGGTGGGCTGAACCTGGCC
TTTGTGCCCGAGTACGTCGCCATCATCGGGTCGGGCTACATCGGGCTCGA
GTTCTCCGACGTCTACACTGCGCTCGGCGCCGAGGTA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig18304:664..1200-

>mRNA_P-wetherbeei_contig18304.1.1 ID=mRNA_P-wetherbeei_contig18304.1.1|Name=mRNA_P-wetherbeei_contig18304.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig18304:664..1200- (Phaeothamnion wetherbeei SAG_119_79)
CTGCACACGCAAACAGGCCTCAAGACGGCCGTCTTCTCCGGGAAGGACGT
CGGGGGCACGTGCGTGAACCGCGGCTGCGTGCCCTCCAAGGCACTCCTCG
CCGCTGCCGGCCGTGTACGTGAAATGCAGGATGGCGAGCACCTCAAGTCC
CTCGGCATCTCCGTGCCCGGCGGCGTCGAGTTCGACCGCGCTGGAGTCGC
CGCACACGCTAAGAACCTGGCGAGCCGCGTCAAGGCCAACCTGGAAGGGT
CGCTCAAGGCGCTGGGGGTGACGGTTGTCGACGCCAAGGGCGAGCTGACC
GGTGCGCACACGGTCAAGCTCCAGGGCACCTCCGAAACCGTCACCGCCAA
GGATATTATTTTGGCGCCGGGGTCGGTGCCGTTCGTGCCCCCGGGGGTAC
AGGCAGACGAGAAGACAGTCTTTACATCGGACGGTGGGCTGAACCTGGCC
TTTGTGCCCGAGTACGTCGCCATCATCGGGTCGGGCTACATCGGGCTCGA
GTTCTCCGACGTCTACACTGCGCTCGGCGCCGAGGTA
back to top