mRNA_P-wetherbeei_contig1828.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1828.1.1 vs. uniprot
Match: A0A813HMN9_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HMN9_POLGL) HSP 1 Score: 77.4 bits (189), Expect = 1.300e-13 Identity = 44/90 (48.89%), Postives = 51/90 (56.67%), Query Frame = 1
Query: 154 PPTSDKRAAVGLILRVRSKGRRLPCFATVAELEEHVGDDCTTQLLLIQRAHNPRDLWSGHLALPGGRQEPGESDLQTVVRECREEVGLKL 423
P +RA+V LILR + D C +L I RA N RD WSGH+ALPGGRQEPGE+D +T VRE REEVGL L
Sbjct: 2 PSGGQRRASVALILRPSPQ------------------DSCGLDVLFILRAANRRDPWSGHVALPGGRQEPGETDEETAVRETREEVGLDL 73
BLAST of mRNA_P-wetherbeei_contig1828.1.1 vs. uniprot
Match: A0A2T0FCB2_9ASCO (Uncharacterized protein C14C4.10c n=1 Tax=Wickerhamiella sorbophila TaxID=45607 RepID=A0A2T0FCB2_9ASCO) HSP 1 Score: 81.3 bits (199), Expect = 2.270e-13 Identity = 46/101 (45.54%), Postives = 59/101 (58.42%), Query Frame = 1
Query: 136 NETRHGPPTSDKRAAVGLILRVRSKGRR-----LPCFATVAELEEHVGDDCTTQLLLIQRAHNPRDLWSGHLALPGGRQEPGESDLQTVVRECREEVGLKL 423
N H TS KRA + LI+RV R + AELE LL I+R +PRD WSGH+A+PGGRQ+PGE+D++T VRE +EEVG+ L
Sbjct: 10 NLEEHRVETSPKRACIALIIRVAGYSRPDLDTWISGLDPAAELE----------LLFIKRTVDPRDRWSGHIAVPGGRQDPGETDIETAVREAKEEVGIDL 100
BLAST of mRNA_P-wetherbeei_contig1828.1.1 vs. uniprot
Match: D8LKY4_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKY4_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 9.700e-12 Identity = 34/52 (65.38%), Postives = 44/52 (84.62%), Query Frame = 1
Query: 268 DCTTQLLLIQRAHNPRDLWSGHLALPGGRQEPGESDLQTVVRECREEVGLKL 423
D ++L+I+RA + RD WSGH+ALPGGRQEPGE++LQT VREC+EEVG+ L
Sbjct: 65 DGKVEMLVIKRAVSLRDKWSGHIALPGGRQEPGETELQTAVRECQEEVGISL 116
BLAST of mRNA_P-wetherbeei_contig1828.1.1 vs. uniprot
Match: A0A7S2CMC3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMC3_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.210e-11 Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 1
Query: 160 TSDKRAAVGLILRVRSKGRRLPCFATVAELEEHVGDDCTTQLLLIQRAHNPRDLWSGHLALPGGRQEPGESDLQTVVRECREEVGL 417
T + A G+ + G R + V L E+ T+LLLI+RA NP+D WSG +ALPGG++E GESDL+ VRE REEVGL
Sbjct: 31 TKGREMACGVKVLTPDAGVRRAAVSVVLRLNENAA----TELLLIRRADNPQDKWSGDIALPGGKREAGESDLEAAVRETREEVGL 112
BLAST of mRNA_P-wetherbeei_contig1828.1.1 vs. uniprot
Match: A0A813EY58_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EY58_POLGL) HSP 1 Score: 77.4 bits (189), Expect = 2.110e-11 Identity = 44/90 (48.89%), Postives = 51/90 (56.67%), Query Frame = 1
Query: 154 PPTSDKRAAVGLILRVRSKGRRLPCFATVAELEEHVGDDCTTQLLLIQRAHNPRDLWSGHLALPGGRQEPGESDLQTVVRECREEVGLKL 423
P +RA+V LILR + D C +L I RA N RD WSGH+ALPGGRQEPGE+D +T VRE REEVGL L
Sbjct: 28 PSGGQRRASVALILRPSPQ------------------DSCGLDVLFILRAANRRDPWSGHVALPGGRQEPGETDEETAVRETREEVGLDL 99
BLAST of mRNA_P-wetherbeei_contig1828.1.1 vs. uniprot
Match: A0A3P3YHJ9_PLABS (Nudix hydrolase domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YHJ9_PLABS) HSP 1 Score: 73.2 bits (178), Expect = 8.050e-11 Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 1
Query: 175 AAVGLILRVRSKGRRLPCFATVAELEEHVGDDCTTQ---LLLIQRAHNPRDLWSGHLALPGGRQEPGESDLQTVVRECREEVGLKLR 426
AAV +I+R G +P T + H T++ +L IQRA + RD WSGH+A PGGR PGES LQTVVRE EE+G+ LR
Sbjct: 8 AAVAVIVRGAHDGAVVP--GTTGPITSHGAALATSEHADMLFIQRATDERDRWSGHVAFPGGRCAPGESPLQTVVREVHEEIGVDLR 92
BLAST of mRNA_P-wetherbeei_contig1828.1.1 vs. uniprot
Match: A0A7S1R8Y0_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R8Y0_ALECA) HSP 1 Score: 71.6 bits (174), Expect = 1.010e-10 Identity = 42/86 (48.84%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 172 RAAVGLILRVRSKGRRLPCFATVAELEEHVGDDCTTQLLLIQRAHNPRDLWSGHLALPGGRQEPGESDLQTVVRECREEVGLKLRP 429
RA+V LILR R R L V + I R+ NP D WSGH+ALPGGR EPGE D+QT VRE EEVG L P
Sbjct: 18 RASVALILRERPGSRGLDTADAV-------------EAAFILRSVNPNDRWSGHVALPGGRHEPGEDDVQTAVRETLEEVGWDLSP 90
BLAST of mRNA_P-wetherbeei_contig1828.1.1 vs. uniprot
Match: A0A8H4B6X6_MUCCL (Nudix hydrolase domain-containing protein n=1 Tax=Mucor circinelloides f. lusitanicus TaxID=29924 RepID=A0A8H4B6X6_MUCCL) HSP 1 Score: 71.2 bits (173), Expect = 1.310e-10 Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 280 QLLLIQRAHNPRDLWSGHLALPGGRQEPGE-SDLQTVVRECREEVGLKLRPPLLAPVPAAE 459
++L IQRA +P D WSGH+A PGG+ EP + SDL TVVRECREE+G+ L P P+ E
Sbjct: 82 EILFIQRALHPGDFWSGHVAFPGGKNEPQDKSDLDTVVRECREEIGIDLSSPNFIPLGTLE 142
BLAST of mRNA_P-wetherbeei_contig1828.1.1 vs. uniprot
Match: A0A835YXA0_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXA0_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.460e-10 Identity = 44/88 (50.00%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 172 RAAVGLILRVR--SKGRRLPCFATVAELEEHV--GDDCTTQLLLIQRAHNPRDLWSGHLALPGGRQEPGESDLQTVVRECREEVGLKL 423
RA+V +LRVR G FA V EL + GD T+LL+I+RA N D WSGH+ALPGGR+ GE L VRE EEVGL++
Sbjct: 79 RASVAALLRVRRAQPGSAGHSFANVRELLAALDDGDAWVTELLVIRRADNAADAWSGHIALPGGRRARGEDGLACAVREVHEEVGLRV 166
BLAST of mRNA_P-wetherbeei_contig1828.1.1 vs. uniprot
Match: A0A168R302_ABSGL (Nudix hydrolase domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168R302_ABSGL) HSP 1 Score: 73.2 bits (178), Expect = 2.490e-10 Identity = 48/128 (37.50%), Postives = 67/128 (52.34%), Query Frame = 1
Query: 85 MMQPLSDEERRIFEAAGNETRH---GPPTSDKRAAVGLILRVRSKG------------RRLPCFATVAELEEHVGDDCTTQLLLIQRAHNPRDLWSGHLALPGGRQEPGESDLQTVVRECREEVGLKL 423
M+ D ++I E NE H PP+ +RA V LILR +K + + F + ++++V D +LL +QRA D WSGH+A GG+ EPGE+D TV RE REE+GL L
Sbjct: 1 MVSSAQDALKKIGERLQNEVPHHIPSPPSQPRRACVALILRWHTKRTHEKPLTSVDLPKTIDEFFQLPWVKDNV--DGRPELLFMQRATRAGDRWSGHIAYIGGKNEPGETDNDTVTREVREEIGLDL 126 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1828.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1828.1.1 >prot_P-wetherbeei_contig1828.1.1 ID=prot_P-wetherbeei_contig1828.1.1|Name=mRNA_P-wetherbeei_contig1828.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=515bp MLSKLLRSLRRPGGNRMMQPLSDEERRIFEAAGNETRHGPPTSDKRAAVGback to top mRNA from alignment at P-wetherbeei_contig1828:917..2928+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1828.1.1 ID=mRNA_P-wetherbeei_contig1828.1.1|Name=mRNA_P-wetherbeei_contig1828.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2012bp|location=Sequence derived from alignment at P-wetherbeei_contig1828:917..2928+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1828:917..2928+ >mRNA_P-wetherbeei_contig1828.1.1 ID=mRNA_P-wetherbeei_contig1828.1.1|Name=mRNA_P-wetherbeei_contig1828.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1545bp|location=Sequence derived from alignment at P-wetherbeei_contig1828:917..2928+ (Phaeothamnion wetherbeei SAG_119_79)back to top |