mRNA_P-wetherbeei_contig18275.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18275.1.1 vs. uniprot
Match: A0A127EW29_9HYPH (Ribonuclease R n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EW29_9HYPH) HSP 1 Score: 697 bits (1798), Expect = 3.180e-245 Identity = 362/453 (79.91%), Postives = 397/453 (87.64%), Query Frame = 1
Query: 1 VLVVAIADVAHHVRPGSALDKEALLRGNSVYFPDRVVPMLPERISNDLCSLRPGENRAALAVRMVIGADGRKRSHTFHRVLMKSAAKLNYAQAQAAIDGRADETTGPLLDPVLKPLYSAYAALKRAREERGPLDLDLPERKILLKADGTVDRVVTPERLDAHRLIEEFMILANVAAAETLEKARVPLIYRVHDEPSLEKIEALRQFLETLHISLPKGGALRAEQFNGILAKVKGQDVEKLVNEVVLRSQAQAEYSAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRAQGFGHDGLPDSQDVSALNEIGAQISAAERRAMKAERETNDRLIAHFLADKIGATFEGRISGVTRAGLFVKLDETSADGFIPARTLGSEYFRYEEAQHAMVGNRTGETHRLGDRVTVKLVEAAPVAGALRFELLSEGRIVG--QKRPP-------RPDRSPRR 1332
+L VAIADVAH+VRPGSALD+EA+ RGNSVYFPDRVVPMLPERISNDLCSLRP E+RAALAVRM+IG DGRKRSHTFHRVLM+SAAKLNY QAQ AI GR D+ TGPLL+ VLKPLY+AY ALKRAR+ RGPLDLDLPERKILLKADGTVDRVV PERL++HRLIEEFMILANVAAAETLEKARVPLIYR HDEPSLEK EALR+FLETLHISLPKGG LR+EQFN IL + KGQDV+ LVNEVVLRSQAQAEYSA+N GHFGLNLRR ADL+VHRGLIRA FG D LP+SQD +AL E+ AQISA+ERRAMKAERET DRLIAHFL+DKIGATFEGRISGVTRAG+F+KLD T ADGF+PART+G+EYFRYEE HAMVGN TGET+RLGDRVTVKLVEAAPVAGALRFELLSEG+IVG Q+RP RP+R P++
Sbjct: 303 ILTVAIADVAHYVRPGSALDREAVKRGNSVYFPDRVVPMLPERISNDLCSLRPREDRAALAVRMIIGPDGRKRSHTFHRVLMRSAAKLNYEQAQMAIGGRTDDDTGPLLENVLKPLYAAYEALKRARDARGPLDLDLPERKILLKADGTVDRVVVPERLESHRLIEEFMILANVAAAETLEKARVPLIYRAHDEPSLEKTEALRKFLETLHISLPKGGVLRSEQFNRILGQTKGQDVDALVNEVVLRSQAQAEYSADNIGHFGLNLRRYAHFTSPIRRYADLVVHRGLIRAGRFGSDDLPESQDHAALAEVAAQISASERRAMKAERETKDRLIAHFLSDKIGATFEGRISGVTRAGIFIKLDHTGADGFVPARTIGNEYFRYEEDMHAMVGNSTGETYRLGDRVTVKLVEAAPVAGALRFELLSEGKIVGRAQQRPSQRRSAKSRPERGPKK 755
BLAST of mRNA_P-wetherbeei_contig18275.1.1 vs. uniprot
Match: A0A537USR1_9PROT (Exoribonuclease II (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537USR1_9PROT) HSP 1 Score: 667 bits (1720), Expect = 5.540e-234 Identity = 351/421 (83.37%), Postives = 389/421 (92.40%), Query Frame = 1
Query: 1 VLVVAIADVAHHVRPGSALDKEALLRGNSVYFPDRVVPMLPERISNDLCSLRPGENRAALAVRMVIGADGRKRSHTFHRVLMKSAAKLNYAQAQAAIDGRADETTGPLLDPVLKPLYSAYAALKRAREERGPLDLDLPERKILLKADGTVDRVVTPERLDAHRLIEEFMILANVAAAETLEKARVPLIYRVHDEPSLEKIEALRQFLETLHISLPKGGALRAEQFNGILAKVKGQDVEKLVNEVVLRSQAQAEYSAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRAQGFGHDGLPDSQDVSALNEIGAQISAAERRAMKAERETNDRLIAHFLADKIGATFEGRISGVTRAGLFVKLDETSADGFIPARTLGSEYFRYEEAQHAMVGNRTGETHRLGDRVTVKLVEAAPVAGALRF 1263
V+ VAIADVAH+VRPGSALD+EALLRGNSVYFPDRVVPMLPERISNDLCSLRPGE+RAALAVR+V+GADGRKRSH+FHRVLM+SAA+LNYAQAQAA+DG DETTGPLL VL+PLY AY A+KRAR+ R PLDLDLPERKI+L A TVDRV+TPERLDAHRLIEEFMILANVAAAETLE+AR+PLIYRVHDEP E++ ALR+FL++L ISLPK GALRAEQFN ILA+VKG+DVEKLVNEVVLR+QAQAEY+AENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRA FG GLP QDV+AL EIGAQISAAERRAMKAERET DRL+AHFLAD+IGATFEG ISG TRAGLFVKLD+T ADGFIPART+G++YFRY E +HA++G R+GETHRLGDRVTV+LVEAAPVAGALRF
Sbjct: 302 VISVAIADVAHYVRPGSALDREALLRGNSVYFPDRVVPMLPERISNDLCSLRPGEDRAALAVRLVVGADGRKRSHSFHRVLMRSAARLNYAQAQAAVDGWPDETTGPLLASVLEPLYCAYRAVKRARDARAPLDLDLPERKIVLTAHNTVDRVMTPERLDAHRLIEEFMILANVAAAETLERARMPLIYRVHDEPDPERVNALREFLQSLDISLPKAGALRAEQFNRILARVKGRDVEKLVNEVVLRTQAQAEYAAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRALQFGDGGLPPEQDVAALGEIGAQISAAERRAMKAERETFDRLLAHFLADRIGATFEGHISGATRAGLFVKLDDTGADGFIPARTIGADYFRYHEDRHALIGARSGETHRLGDRVTVRLVEAAPVAGALRF 722
BLAST of mRNA_P-wetherbeei_contig18275.1.1 vs. uniprot
Match: A0A537UGK7_9PROT (Ribonuclease R n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537UGK7_9PROT) HSP 1 Score: 662 bits (1708), Expect = 1.220e-231 Identity = 353/444 (79.50%), Postives = 394/444 (88.74%), Query Frame = 1
Query: 1 VLVVAIADVAHHVRPGSALDKEALLRGNSVYFPDRVVPMLPERISNDLCSLRPGENRAALAVRMVIGADGRKRSHTFHRVLMKSAAKLNYAQAQAAIDGRADETTGPLLDPVLKPLYSAYAALKRAREERGPLDLDLPERKILLKADGTVDRVVTPERLDAHRLIEEFMILANVAAAETLEKARVPLIYRVHDEPSLEKIEALRQFLETLHISLPKGGALRAEQFNGILAKVKGQDVEKLVNEVVLRSQAQAEYSAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRAQGFGHDGLPDSQDVSALNEIGAQISAAERRAMKAERETNDRLIAHFLADKIGATFEGRISGVTRAGLFVKLDETSADGFIPARTLGSEYFRYEEAQHAMVGNRTGETHRLGDRVTVKLVEAAPVAGALRFELLSEGR-IVGQKRPPRPDRSPR 1329
++ VAIADV+H+VRPGSALD+EAL RGNSVYFPDRVVPMLPERISNDLCSLRPGE+RAALAVR+V+GADGRKRSH+FHRVLM+SAA+LNY QAQAAIDG DE TGPLL VL+PLY AY ALK AR+ R PLDLDLPERKI+L A TVDRV+TPERLDAHRLIEEFMILANVAAAETLE+A VPLIYR+HDEP E++ ALR+FL +L ISLPKGGALRAE FN ILA+VKG+DVEKLVNEVVLR+QAQAEY+AENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRA G GLP QD +A+ EIGAQISAAERRAMKAERET DRLIAHFLAD+IGATF G ISG TRAGLFVKLD+T ADGF+PART+G+EYFRY E +HA++G R+GET+RLGDRVTV+LVEAAPVAGALRFE+LSEGR +R PR +R R
Sbjct: 302 IISVAIADVSHYVRPGSALDREALTRGNSVYFPDRVVPMLPERISNDLCSLRPGEDRAALAVRLVVGADGRKRSHSFHRVLMRSAARLNYVQAQAAIDGWPDEATGPLLATVLEPLYLAYRALKHARDARAPLDLDLPERKIVLTAHNTVDRVMTPERLDAHRLIEEFMILANVAAAETLERAHVPLIYRLHDEPDPERVNALREFLRSLDISLPKGGALRAEHFNRILARVKGRDVEKLVNEVVLRTQAQAEYAAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRALRLGDGGLPQEQDAAAVGEIGAQISAAERRAMKAERETFDRLIAHFLADRIGATFAGHISGATRAGLFVKLDDTGADGFVPARTIGTEYFRYHEDRHALIGARSGETYRLGDRVTVRLVEAAPVAGALRFEILSEGRHTAAGRRHPRHERETR 745
BLAST of mRNA_P-wetherbeei_contig18275.1.1 vs. uniprot
Match: A0A6N7GYP8_9HYPH (Ribonuclease R n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GYP8_9HYPH) HSP 1 Score: 658 bits (1698), Expect = 4.000e-230 Identity = 346/440 (78.64%), Postives = 393/440 (89.32%), Query Frame = 1
Query: 1 VLVVAIADVAHHVRPGSALDKEALLRGNSVYFPDRVVPMLPERISNDLCSLRPGENRAALAVRMVIGADGRKRSHTFHRVLMKSAAKLNYAQAQAAIDGRADETTGPLLDPVLKPLYSAYAALKRAREERGPLDLDLPERKILLKADGTVDRVVTPERLDAHRLIEEFMILANVAAAETLEKARVPLIYRVHDEPSLEKIEALRQFLETLHISLPKGGALRAEQFNGILAKVKGQDVEKLVNEVVLRSQAQAEYSAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRAQGFGHDGLPDSQDVSALNEIGAQISAAERRAMKAERETNDRLIAHFLADKIGATFEGRISGVTRAGLFVKLDETSADGFIPARTLGSEYFRYEEAQHAMVGNRTGETHRLGDRVTVKLVEAAPVAGALRFELLSEGRIVGQKRPPRPDR 1320
V+ VAIADVA +VRPGSALD EA +RGNSVYFPDRVVPMLPERISNDLCSLRP E+RAALAVRMV+GADGRKRSHTFHRVL++SAAKL+Y QAQ AIDG ADE +GPL+ VL+PLY+ Y LKRAR+ER PLDLD+PERKI+L A TVDRV+TPERLD+HRLIEEFMILANVAAAETLEK RVPLIYRVHDEP +E++ ALR+FL+TL ISLPK GALRAEQFN IL +VKG+DVEKLVNEVVLR+QAQAEY+AENYGHFGLNLRRXXXXXXXXXXXADL+VHRGLIRA G GLP+++D+ +LNE+ A ISA ERRAMKAERET DRL+AHFLAD++GATF+G ISGVTRAGLFVKLD+T ADG IPART+G+EYFRY+E QHA++GN +GET+RLGD VTVKLVEAAPVAGALRFELLSEGR +K+ RP R
Sbjct: 297 VIHVAIADVASYVRPGSALDHEARIRGNSVYFPDRVVPMLPERISNDLCSLRPAEDRAALAVRMVVGADGRKRSHTFHRVLIRSAAKLSYQQAQRAIDGWADEVSGPLIGTVLEPLYAVYRVLKRARDERAPLDLDIPERKIVLTAHNTVDRVMTPERLDSHRLIEEFMILANVAAAETLEKVRVPLIYRVHDEPDMERVNALREFLKTLDISLPKAGALRAEQFNHILQRVKGRDVEKLVNEVVLRTQAQAEYTAENYGHFGLNLRRXXXXXXXXXXXADLVVHRGLIRAGKLGDGGLPETEDLQSLNEVSAAISATERRAMKAERETFDRLLAHFLADRVGATFQGHISGVTRAGLFVKLDDTGADGLIPARTIGNEYFRYQEDQHALIGNNSGETYRLGDAVTVKLVEAAPVAGALRFELLSEGRYDRRKQTERPPR 736
BLAST of mRNA_P-wetherbeei_contig18275.1.1 vs. uniprot
Match: UPI0003FCFD88 (ribonuclease R n=1 Tax=Bradyrhizobium sp. Tv2a-2 TaxID=113395 RepID=UPI0003FCFD88) HSP 1 Score: 646 bits (1667), Expect = 3.600e-225 Identity = 337/431 (78.19%), Postives = 383/431 (88.86%), Query Frame = 1
Query: 10 VAIADVAHHVRPGSALDKEALLRGNSVYFPDRVVPMLPERISNDLCSLRPGENRAALAVRMVIGADGRKRSHTFHRVLMKSAAKLNYAQAQAAIDGRADETTGPLLDPVLKPLYSAYAALKRAREERGPLDLDLPERKILLKADGTVDRVVTPERLDAHRLIEEFMILANVAAAETLEKARVPLIYRVHDEPSLEKIEALRQFLETLHISLPKGGALRAEQFNGILAKVKGQDVEKLVNEVVLRSQAQAEYSAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRAQGFGHDGLPDSQDVSALNEIGAQISAAERRAMKAERETNDRLIAHFLADKIGATFEGRISGVTRAGLFVKLDETSADGFIPARTLGSEYFRYEEAQHAMVGNRTGETHRLGDRVTVKLVEAAPVAGALRFELLSEGRIVGQKR 1302
VAIADVA +VRPGSALD++AL+RGNSVYFPDRVVPMLPERISN+LCSL PGE R ALAVRMVIGADGRKRSH+FHR+LM+SAAKL+YAQAQAAIDGR D+TTGPLLDP+LKPLY+AYAA KRAREER PLDLD+PERKILLK DGTVDRVV P+RLDAH+LIEEFMILANVAAAE LEK +PLIYRVHDEPS+EK++AL++FL TL + KGG+LR FNG+LA+V+GQD E+LVNEVVLRSQAQAEYSAENYGHFGLNLRRXXXXXXXXXXXADLIVHR LIR G G LPD + + L+EI AQISA ERRAMKAERET DRLIAH LAD+IGATF+GRISGVTRAGLFVKL +T ADGFIP R+LGSEY+ Y+E +HA++G+R+G THRLGD V V+LVEA P+AGALRFELLSEG + ++R
Sbjct: 302 VAIADVAFYVRPGSALDRDALVRGNSVYFPDRVVPMLPERISNNLCSLVPGEPRGALAVRMVIGADGRKRSHSFHRILMRSAAKLHYAQAQAAIDGRPDDTTGPLLDPILKPLYAAYAAAKRAREERDPLDLDIPERKILLKPDGTVDRVVVPQRLDAHKLIEEFMILANVAAAEMLEKKALPLIYRVHDEPSVEKVQALQEFLRTLDLPFAKGGSLRPSLFNGVLAQVQGQDYEQLVNEVVLRSQAQAEYSAENYGHFGLNLRRXXXXXXXXXXXADLIVHRALIRGLGLGEGALPDGESLETLSEIAAQISATERRAMKAERETADRLIAHHLADRIGATFQGRISGVTRAGLFVKLSDTGADGFIPIRSLGSEYYNYDETRHALIGSRSGATHRLGDVVDVRLVEAQPIAGALRFELLSEGEVAPRER 732
BLAST of mRNA_P-wetherbeei_contig18275.1.1 vs. uniprot
Match: A0A537MZK2_9PROT (Exoribonuclease II (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MZK2_9PROT) HSP 1 Score: 633 bits (1633), Expect = 4.030e-224 Identity = 337/427 (78.92%), Postives = 378/427 (88.52%), Query Frame = 1
Query: 1 VLVVAIADVAHHVRPGSALDKEALLRGNSVYFPDRVVPMLPERISNDLCSLRPGENRAALAVRMVIGADGRKRSHTFHRVLMKSAAKLNYAQAQAAIDGRADETTGPLLDPVLKPLYSAYAALKRAREERGPLDLDLPERKILLKADGTVDRVVTPERLDAHRLIEEFMILANVAAAETLEKARVPLIYRVHDEPSLEKIEALRQFLETLHISLPKGGALRAEQFNGILAKVKGQDVEKLVNEVVLRSQAQAEYSAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRAQGFGHDGLPDSQDVSALNEIGAQISAAERRAMKAERETNDRLIAHFLADKIGATFEGRISGVTRAGLFVKLDETSADGFIPARTLGSEYFRYEEAQHAMVGNRTGETHRLGDRVTVKLVEAAPVAGALRFELLSEG 1281
V+ VAIADVAH+VRPGSALD+EAL+RGNSVYFPDRVVPMLPERISNDLCSL+ G +R A+AVRMVIGADGRKRSH FHRVL++SAA+L+Y Q Q AIDG ADE PL+ ++PLY+AYAA+KRAR++R PL+LDLPERKILLK D TVDRVVTP RL++HRLIEEFMILANVAAAETLE+ARVPLIYRVHDEP+LEKI+ALR+FL TL ISL K ALR FN ILA+V+G DV KLV+EVVLRSQ+QAEY+AENYGHFGLNLRRXXXXXXXXXXXADLIVHR LIRA FG DGLP+ +DV +L EIGA+ISA ERRAM AERET DRLIAHFLA+KIGATF+G I GVTRAGLFVKLD+T ADGFIPARTLGS+YFRY EA+HA+VG TG THRLGDRV V+LVEA PVAGALRFELLSEG
Sbjct: 40 VVSVAIADVAHYVRPGSALDREALVRGNSVYFPDRVVPMLPERISNDLCSLKAGVDRPAIAVRMVIGADGRKRSHAFHRVLIRSAARLHYTQVQDAIDGAADEAIEPLVPMAIEPLYAAYAAVKRARDDRAPLELDLPERKILLKPDATVDRVVTPPRLESHRLIEEFMILANVAAAETLERARVPLIYRVHDEPALEKIQALREFLRTLDISLQKSQALRPADFNRILARVEGSDVAKLVHEVVLRSQSQAEYAAENYGHFGLNLRRXXXXXXXXXXXADLIVHRALIRALKFGRDGLPEGEDVRSLGEIGAKISATERRAMVAERETVDRLIAHFLAEKIGATFDGHIGGVTRAGLFVKLDDTGADGFIPARTLGSDYFRYREAEHALVGEATGATHRLGDRVKVRLVEAIPVAGALRFELLSEG 466
BLAST of mRNA_P-wetherbeei_contig18275.1.1 vs. uniprot
Match: A0A537L8E9_9PROT (Ribonuclease R n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L8E9_9PROT) HSP 1 Score: 642 bits (1656), Expect = 8.630e-224 Identity = 342/428 (79.91%), Postives = 379/428 (88.55%), Query Frame = 1
Query: 1 VLVVAIADVAHHVRPGSALDKEALLRGNSVYFPDRVVPMLPERISNDLCSLRPGENRAALAVRMVIGADGRKRSHTFHRVLMKSAAKLNYAQAQAAIDGRADETTGPLLDPVLKPLYSAYAALKRAREERGPLDLDLPERKILLKADGTVDRVVTPERLDAHRLIEEFMILANVAAAETLEKARVPLIYRVHDEPSLEKIEALRQFLETLHISLPKGGALRAEQFNGILAKVKGQDVEKLVNEVVLRSQAQAEYSAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRAQGFGHDGLPDSQDVSALNEIGAQISAAERRAMKAERETNDRLIAHFLADKIGATFEGRISGVTRAGLFVKLDETSADGFIPARTLGSEYFRYEEAQHAMVGNRTGETHRLGDRVTVKLVEAAPVAGALRFELLSEGR 1284
V+ VAIADVAH+V PGSALD++AL+RGNSVYFPD+VVPMLPERISNDLCSLRP E+R ALAVRMVI +GRKRSHTFHRVLM+SAAKL+YAQAQAA DGRADE T PLL PV+ PLY+AY A R ER PLDLDLPERKI+LK DGTVDRV+ P RLDAHRLIEEFMILANVAAAE LE+ARVPLIYRVHDEPS EKIEALR+FLETL I L KG +R FN ILA+VKG + E+LVNEVVLRSQAQAEYSA+NYGHFGLNLRRXXXXXXXXXXXADL+VHR LIRA G DGLP+S DV ALNEI A+ISAAERRAMKAERET DRLIA+FLAD+IGATFEGRISGVTRAGLFVKL++T ADGF+PAR +G +YFRY EA+HA++G+ TGE++RLGD VTVKLVEAAPVAGALRFELLSEGR
Sbjct: 304 VITVAIADVAHYVTPGSALDRDALVRGNSVYFPDQVVPMLPERISNDLCSLRPNEDRGALAVRMVIDRNGRKRSHTFHRVLMRSAAKLHYAQAQAAADGRADEATAPLLSPVIAPLYAAYRARLHERAERQPLDLDLPERKIMLKPDGTVDRVIVPPRLDAHRLIEEFMILANVAAAEALERARVPLIYRVHDEPSPEKIEALREFLETLDIRLAKGQTMRPGDFNKILARVKGSEHEQLVNEVVLRSQAQAEYSADNYGHFGLNLRRXXXXXXXXXXXADLVVHRALIRAHHLGSDGLPNSVDVPALNEIAARISAAERRAMKAERETTDRLIANFLADRIGATFEGRISGVTRAGLFVKLNDTGADGFVPARVIGDDYFRYHEARHALIGDHTGESYRLGDAVTVKLVEAAPVAGALRFELLSEGR 731
BLAST of mRNA_P-wetherbeei_contig18275.1.1 vs. uniprot
Match: A0A537NJM9_9PROT (Ribonuclease R n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NJM9_9PROT) HSP 1 Score: 642 bits (1656), Expect = 1.050e-223 Identity = 339/425 (79.76%), Postives = 382/425 (89.88%), Query Frame = 1
Query: 10 VAIADVAHHVRPGSALDKEALLRGNSVYFPDRVVPMLPERISNDLCSLRPGENRAALAVRMVIGADGRKRSHTFHRVLMKSAAKLNYAQAQAAIDGRADETTGPLLDPVLKPLYSAYAALKRAREERGPLDLDLPERKILLKADGTVDRVVTPERLDAHRLIEEFMILANVAAAETLEKARVPLIYRVHDEPSLEKIEALRQFLETLHISLPKGGALRAEQFNGILAKVKGQDVEKLVNEVVLRSQAQAEYSAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRAQGFGHDGLPDSQDVSALNEIGAQISAAERRAMKAERETNDRLIAHFLADKIGATFEGRISGVTRAGLFVKLDETSADGFIPARTLGSEYFRYEEAQHAMVGNRTGETHRLGDRVTVKLVEAAPVAGALRFELLSEGR 1284
VAIADVA+ VRP SALD+EA+LRGNSVYFPDRVVPMLPERISNDLCSLRPG +RAALAVRMV+GADGRKRSH+FHRVLM+S+AKL+Y QAQAAIDG DE TGPLL VL+PLY+AY LKRAR++R PLDLDLPERKI+L A TVDRVVTPERLDAHRLIEEFMILANVAAAETLE+ARVPLIYRVHDEP E++ ALR+FL+TL IS K GALRA QFNG+L +V+G+DVEKLVNEVVLR+QAQAEY+AENYGHFGLNLRRXXXXXXXXXXXADLIVHRG+IRA G GLP +QDV+AL EIGAQ+SA ERRAMKAERET DRL+AHFLAD+IGATFEG ISG TRAGLFV LD+T ADGFIPAR LG +YFR+ E +HA++G+R+GE+ RLGDRVTV+LVEAAPVAGALRFE++ EGR
Sbjct: 305 VAIADVAYFVRPDSALDREAVLRGNSVYFPDRVVPMLPERISNDLCSLRPGADRAALAVRMVVGADGRKRSHSFHRVLMRSSAKLSYVQAQAAIDGWPDEITGPLLGCVLEPLYAAYRCLKRARDDRAPLDLDLPERKIVLTAHNTVDRVVTPERLDAHRLIEEFMILANVAAAETLERARVPLIYRVHDEPEPERVNALREFLQTLDISFAKTGALRAAQFNGVLNRVRGRDVEKLVNEVVLRTQAQAEYAAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGVIRALNLGDGGLPQTQDVAALAEIGAQVSATERRAMKAERETFDRLLAHFLADRIGATFEGHISGATRAGLFVNLDDTGADGFIPARNLGPDYFRHHENRHALIGDRSGESFRLGDRVTVRLVEAAPVAGALRFEVVYEGR 729
BLAST of mRNA_P-wetherbeei_contig18275.1.1 vs. uniprot
Match: A0A6L5FJY9_9HYPH (Ribonuclease R n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FJY9_9HYPH) HSP 1 Score: 640 bits (1651), Expect = 4.470e-223 Identity = 341/443 (76.98%), Postives = 391/443 (88.26%), Query Frame = 1
Query: 1 VLVVAIADVAHHVRPGSALDKEALLRGNSVYFPDRVVPMLPERISNDLCSLRPGENRAALAVRMVIGADGRKRSHTFHRVLMKSAAKLNYAQAQAAIDGRADETTGPLLDPVLKPLYSAYAALKRAREERGPLDLDLPERKILLKADGTVDRVVTPERLDAHRLIEEFMILANVAAAETLEKARVPLIYRVHDEPSLEKIEALRQFLETLHISLPKGGALRAEQFNGILAKVKGQDVEKLVNEVVLRSQAQAEYSAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRAQGFGHDGLPDSQDVSALNEIGAQISAAERRAMKAERETNDRLIAHFLADKIGATFEGRISGVTRAGLFVKLDETSADGFIPARTLGSEYFRYEEAQHAMVGNRTGETHRLGDRVTVKLVEAAPVAGALRFELLSEG---RIVGQKRPPRPDR 1320
V+ VAIADV +VRPGSALD+EAL+RGNSVYFPDRVVPMLPERISNDLCSL+P +RAALAVRM++GADGRKRSH+FHRVL++SAAKL+Y QAQAAIDG ADETTGPLL VL+PLY+ Y ALKRAREER PLDLD+PERKI+L A TVDRV+TPERLD+HRLIEEFMILANVAAAETLE+ARVPLIYRVHDEP +E++ ALR+FL+T+ +SLPK GALRA QFN ILA+VKG+DVEKLVNE+VLR+QAQAEY+AENYGHFGLNLRRXXXXXXXXXXXADLIVHR +IRA G LPD+ DV +L EI AQISAAERRAM+AERET DRL+AHFLAD++GA FEG ISGVTRAGLFVKLD+T ADGFIPAR +G +YFRY EA HA VG+ G T+RLGD V+V+LVEAAPVAGALRFE+LS+G R +G+ R RP+R
Sbjct: 292 VIDVAIADVGDYVRPGSALDREALVRGNSVYFPDRVVPMLPERISNDLCSLKPQADRAALAVRMIVGADGRKRSHSFHRVLIRSAAKLSYQQAQAAIDGWADETTGPLLGSVLEPLYATYRALKRAREERAPLDLDIPERKIVLTAHNTVDRVMTPERLDSHRLIEEFMILANVAAAETLERARVPLIYRVHDEPDMERVNALREFLQTIDLSLPKAGALRAAQFNHILARVKGRDVEKLVNEIVLRTQAQAEYAAENYGHFGLNLRRXXXXXXXXXXXADLIVHRAIIRALKLGAGVLPDNADVRSLGEIAAQISAAERRAMRAERETFDRLLAHFLADRVGAEFEGHISGVTRAGLFVKLDDTGADGFIPARMIGDDYFRYHEAAHAFVGSAKGATYRLGDAVSVRLVEAAPVAGALRFEMLSDGKAGRKLGKIRSGRPER 734
BLAST of mRNA_P-wetherbeei_contig18275.1.1 vs. uniprot
Match: A0A1M5T3D4_9BRAD (Ribonuclease R n=2 Tax=Bradyrhizobium TaxID=374 RepID=A0A1M5T3D4_9BRAD) HSP 1 Score: 641 bits (1653), Expect = 6.370e-223 Identity = 345/457 (75.49%), Postives = 389/457 (85.12%), Query Frame = 1
Query: 10 VAIADVAHHVRPGSALDKEALLRGNSVYFPDRVVPMLPERISNDLCSLRPGENRAALAVRMVIGADGRKRSHTFHRVLMKSAAKLNYAQAQAAIDGRADETTGPLLDPVLKPLYSAYAALKRAREERGPLDLDLPERKILLKADGTVDRVVTPERLDAHRLIEEFMILANVAAAETLEKARVPLIYRVHDEPSLEKIEALRQFLETLHISLPKGGALRAEQFNGILAKVKGQDVEKLVNEVVLRSQAQAEYSAENYGHFGLNLRRXXXXXXXXXXXADLIVHRGLIRAQGFGHDGLPDSQDVSALNEIGAQISAAERRAMKAERETNDRLIAHFLADKIGATFEGRISGVTRAGLFVKLDETSADGFIPARTLGSEYFRYEEAQHAMVGNRTGETHRLGDRVTVKLVEAAPVAGALRFELLSEGRIV--GQKRP----PR----PDRSPRREDSRPD 1350
VAIADV +VRPGSALD++AL RGNSVYFPDRVVPMLPERISNDLCSL PGE R ALAVRMVI DGRKRSH+FHR+LM+SAAKLNYAQAQAAIDGR D+TTGPLL PVLKPLY AYA +KRAR+ER PLDLD+PERKILLK DGTVDRV+ PERLDAH+LIEEFMILANVAAAE LEK +PLIYRVHDEP+LEK+ AL++FL+TL + K GALR FN +LA+V+G+D E LVNEVVLRSQAQAEY+AENYGHFGLNLRRXXXXXXXXXXXADLIVHR LIR G G LP+++ V L E+ AQIS ERRAMKAERET DRLIAHFLAD+IGATF+GRISGVTRAGLFVKL +T ADG IP RTLG+EYF Y+E +HA++G+R+G HRLGD V V+LVEAAPVAGALRFELLSEG +V G+KRP PR P RSPR++D +PD
Sbjct: 304 VAIADVGFYVRPGSALDRDALTRGNSVYFPDRVVPMLPERISNDLCSLVPGEPRGALAVRMVIAGDGRKRSHSFHRILMRSAAKLNYAQAQAAIDGRPDDTTGPLLAPVLKPLYDAYAVVKRARDERDPLDLDIPERKILLKPDGTVDRVIVPERLDAHKLIEEFMILANVAAAEMLEKKSLPLIYRVHDEPTLEKVHALQEFLKTLDLPFAKSGALRPSLFNRVLAQVRGRDSEPLVNEVVLRSQAQAEYAAENYGHFGLNLRRXXXXXXXXXXXADLIVHRALIRGLGLGEGALPETETVETLTEVAAQISLTERRAMKAERETADRLIAHFLADRIGATFQGRISGVTRAGLFVKLSDTGADGLIPIRTLGTEYFNYDETRHALIGSRSGAMHRLGDVVDVRLVEAAPVAGALRFELLSEGNVVPRGRKRPEDSTPRAKAHPGRSPRKKDRKPD 760 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18275.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18275.1.1 >prot_P-wetherbeei_contig18275.1.1 ID=prot_P-wetherbeei_contig18275.1.1|Name=mRNA_P-wetherbeei_contig18275.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=454bp VLVVAIADVAHHVRPGSALDKEALLRGNSVYFPDRVVPMLPERISNDLCSback to top mRNA from alignment at P-wetherbeei_contig18275:1..1362+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18275.1.1 ID=mRNA_P-wetherbeei_contig18275.1.1|Name=mRNA_P-wetherbeei_contig18275.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1362bp|location=Sequence derived from alignment at P-wetherbeei_contig18275:1..1362+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18275:1..1362+ >mRNA_P-wetherbeei_contig18275.1.1 ID=mRNA_P-wetherbeei_contig18275.1.1|Name=mRNA_P-wetherbeei_contig18275.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1362bp|location=Sequence derived from alignment at P-wetherbeei_contig18275:1..1362+ (Phaeothamnion wetherbeei SAG_119_79)back to top |