mRNA_P-wetherbeei_contig18251.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18251.1.1 vs. uniprot
Match: A0A835YJ60_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ60_9STRA) HSP 1 Score: 125 bits (314), Expect = 4.730e-28 Identity = 87/175 (49.71%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 55 SRSNSLVILVRRNS-GLPAASAAVDALEDDFARFLDAEVEKVVLFFLQEQGALAKKMLEALRDLDMLGGRGGGDAXXXXXXXXXXSAGSLLIEERILPKGAHERALAAADAAFLDIGGGCVDLLRFLQLNVAALRKILKKHDKQARDRLLACNYLSSRARAKYSFLQQLYHNEGL 576
SR SL ++R NS S+ ++ EDDF+R +D EVEKVVLFFLQEQG+LA +ML A+R+ + +A S+ +L EE L IG V LL FLQLNV LRKILKKHDKQ RDRLLA NYL SRAR +YSFLQQLYHNEG+
Sbjct: 51 SRRPSLTAMIRSNSFASRPVSSNMNNKEDDFSRKVDDEVEKVVLFFLQEQGSLATRML-AVREKLPVQAPINSNAMMNMADLEVNSSRALNSEE-----------LDQLHKEITAIGQDMVKLLEFLQLNVTGLRKILKKHDKQIRDRLLAANYLCSRARVRYSFLQQLYHNEGI 213
BLAST of mRNA_P-wetherbeei_contig18251.1.1 vs. uniprot
Match: D8LS38_ECTSI (SPX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS38_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 3.840e-17 Identity = 63/140 (45.00%), Postives = 84/140 (60.00%), Query Frame = 1
Query: 163 EVEKVVLFFLQEQGALAKKMLEALRDL--DMLGGRGGGDAXXXXXXXXXXSAGSLLIEERILPKGAHERALAAADAAFLDIGGGCVDLLRFLQLNVAALRKILKKHDKQARDRLLACNYLSSRARAKYSFLQQLYHNEGL 576
+VEKVVLFFL +QG LA+ +L+A R L GG G++ AG I+ + A+ + IG +L+RFLQLNV+ LRKILKKHDKQ RD+L+A NYLS+RA KYS ++QLY+N G+
Sbjct: 5 QVEKVVLFFLSKQGELAQLLLDA-RQLRPSQKGGNSAGNSGNAFFIGN--GAGGDAATGGIIARETDRHAI------YCSIGTQIAELMRFLQLNVSGLRKILKKHDKQVRDKLIAKNYLSTRANEKYSSMRQLYNNAGV 135
BLAST of mRNA_P-wetherbeei_contig18251.1.1 vs. uniprot
Match: A0A8K1CQA2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQA2_PYTOL) HSP 1 Score: 80.9 bits (198), Expect = 4.660e-13 Identity = 56/151 (37.09%), Postives = 74/151 (49.01%), Query Frame = 1
Query: 127 ALEDDFARFLDAEVEKVVLFFLQEQGALAKKMLEALRDLDMLGGRGGGDAXXXXXXXXXXSAGSLLIEERILPKGAHERALAAADAAFLDIGGGCVDLLRFLQLNVAALRKILKKHDKQARDRLLACNYLSSRARAKYSFLQQLYHNEGLS 579
A +D F R LDA+VE+VVLFFL +QG AK + R+ D A A+ A F G V LL +++LN +RKILKKHDK ++R + YLSSR ++ S LQQLYH+EG+S
Sbjct: 48 AAQDGFQRALDAQVERVVLFFLTKQGEFAKTLAALRREQDET-------------------------------TTADLEAMHALGDRFRRTGDELVQLLHYVELNATGIRKILKKHDKMMKERKIMGAYLSSRTDSQASHLQQLYHDEGIS 167
BLAST of mRNA_P-wetherbeei_contig18251.1.1 vs. uniprot
Match: A0A6H5JD70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD70_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 6.260e-13 Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 1
Query: 382 AAFLDIGGGCVDLLRFLQLNVAALRKILKKHDKQARDRLLACNYLSSRARAKYSFLQQLYHNEGL 576
A + IG +L+RFLQLNV+ LRKILKKHDKQ RD+L+A NYLS+RA+ KYS ++QLY+N G+
Sbjct: 10 AIYCSIGRQIAELMRFLQLNVSGLRKILKKHDKQVRDKLIAKNYLSTRAKEKYSSMRQLYNNAGV 74
BLAST of mRNA_P-wetherbeei_contig18251.1.1 vs. uniprot
Match: A0A067CJA4_SAPPC (SPX domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CJA4_SAPPC) HSP 1 Score: 78.6 bits (192), Expect = 2.220e-12 Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 1
Query: 130 LEDDFARFLDAEVEKVVLFFLQEQGALAKKMLEALRDLDMLGGRGGGDAXXXXXXXXXXSAGSLLIEERILPKGAHERALAAADAAFLDIGGGCVDLLRFLQLNVAALRKILKKHDKQARDRLLACNYLSSRARAKYSFLQQLYHNEGLS 579
L+ +F + LDAE+EK+VLFFL +QG A+++ + ++ L + + +A+ + IG V LL +++LN LRKILKKHDK + + NY+S+R A S LQQLYH+EG+S
Sbjct: 65 LQQEFEKKLDAEIEKIVLFFLTKQGEFAQRLATYRQ------------------------------AQQSLQYASEAQTIASLADGYRKIGEELVHLLHYVELNATGLRKILKKHDKNNKAHKITDNYISTRVDANVSHLQQLYHDEGIS 184
BLAST of mRNA_P-wetherbeei_contig18251.1.1 vs. uniprot
Match: A0A1V9ZAE3_9STRA (Major Facilitator Superfamily (MFS) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZAE3_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.820e-12 Identity = 50/151 (33.11%), Postives = 74/151 (49.01%), Query Frame = 1
Query: 127 ALEDDFARFLDAEVEKVVLFFLQEQGALAKKMLEALRDLDMLGGRGGGDAXXXXXXXXXXSAGSLLIEERILPKGAHERALAAADAAFLDIGGGCVDLLRFLQLNVAALRKILKKHDKQARDRLLACNYLSSRARAKYSFLQQLYHNEGLS 579
AL+ +F + LDAE+EK+VLFFL +QG A+++ + ++ L + + + IG V LL +++LN LRKILKKHDK + + NY+S+R A S LQQLYH+EG+S
Sbjct: 93 ALQQEFEKKLDAEIEKIVLFFLTKQGEFAQRLKQCRET------------------------------QKSLVYNSEVETIQTLGDGYRKIGEELVHLLHYVELNATGLRKILKKHDKNNKAHKITDNYISTRVDANVSHLQQLYHDEGIS 213
BLAST of mRNA_P-wetherbeei_contig18251.1.1 vs. uniprot
Match: A0A1V9YFP9_9STRA (Major Facilitator Superfamily (MFS) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFP9_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.840e-12 Identity = 50/150 (33.33%), Postives = 74/150 (49.33%), Query Frame = 1
Query: 130 LEDDFARFLDAEVEKVVLFFLQEQGALAKKMLEALRDLDMLGGRGGGDAXXXXXXXXXXSAGSLLIEERILPKGAHERALAAADAAFLDIGGGCVDLLRFLQLNVAALRKILKKHDKQARDRLLACNYLSSRARAKYSFLQQLYHNEGLS 579
L+ +F + LDAE+EK+VLFFL +QG A+++ S ++ L + + + + IG V LL +++LN LRKILKKHDK + + NY+S+R A S LQQLYH+EG+S
Sbjct: 102 LQQEFEKKLDAEIEKIVLFFLTKQGEFAQRLA------------------------------SFRQTQQTLASASEAQTIQGLADGYRKIGEELVHLLHYVELNATGLRKILKKHDKNNKAHKITDNYISTRVDANVSHLQQLYHDEGIS 221
BLAST of mRNA_P-wetherbeei_contig18251.1.1 vs. uniprot
Match: A0A067BPB1_SAPPC (SPX domain-containing protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BPB1_SAPPC) HSP 1 Score: 75.5 bits (184), Expect = 3.540e-12 Identity = 49/146 (33.56%), Postives = 73/146 (50.00%), Query Frame = 1
Query: 142 FARFLDAEVEKVVLFFLQEQGALAKKMLEALRDLDMLGGRGGGDAXXXXXXXXXXSAGSLLIEERILPKGAHERALAAADAAFLDIGGGCVDLLRFLQLNVAALRKILKKHDKQARDRLLACNYLSSRARAKYSFLQQLYHNEGLS 579
F + LDAE+EK+VLFFL +QG A+++ + ++ L + + +A+ + IG V LL +++LN LRKILKKHDK + + NY+S+R A S LQQLYH+EG+S
Sbjct: 49 FEKKLDAEIEKIVLFFLTKQGEFAQRLATYRQ------------------------------AQQSLQYASEAQTIASLADGYRKIGEELVHLLHYVELNATGLRKILKKHDKNNKAHKITDNYISTRVDANVSHLQQLYHDEGIS 164
BLAST of mRNA_P-wetherbeei_contig18251.1.1 vs. uniprot
Match: T0PWY1_SAPDV (SPX domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PWY1_SAPDV) HSP 1 Score: 76.6 bits (187), Expect = 1.190e-11 Identity = 49/150 (32.67%), Postives = 74/150 (49.33%), Query Frame = 1
Query: 130 LEDDFARFLDAEVEKVVLFFLQEQGALAKKMLEALRDLDMLGGRGGGDAXXXXXXXXXXSAGSLLIEERILPKGAHERALAAADAAFLDIGGGCVDLLRFLQLNVAALRKILKKHDKQARDRLLACNYLSSRARAKYSFLQQLYHNEGLS 579
L+ +F + LDAE+EK+VLFFL +QG A+++ + ++ L + + + + IG V LL +++LN LRKILKKHDK + + NY+S+R A S LQQLYH+EG+S
Sbjct: 65 LQQEFEKKLDAEIEKIVLFFLAKQGEFAQRLATYRQ------------------------------AQQSLQYASEAQTITTLADGYRKIGEELVHLLHYVELNATGLRKILKKHDKNNKAHKITDNYISTRVDANVSHLQQLYHDEGIS 184
BLAST of mRNA_P-wetherbeei_contig18251.1.1 vs. uniprot
Match: A0A662WSU8_9STRA (SPX domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSU8_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 4.340e-10 Identity = 50/139 (35.97%), Postives = 70/139 (50.36%), Query Frame = 1
Query: 163 EVEKVVLFFLQEQGALAKKMLEALRDLDMLGGRGGGDAXXXXXXXXXXSAGSLLIEERILPKGAHERALAAADAAFLDIGGGCVDLLRFLQLNVAALRKILKKHDKQARDRLLACNYLSSRARAKYSFLQQLYHNEGLS 579
+VE+VVLFFL +QG AK + E L ++ L G E + AD + +G V LL F++LN +RKILKKHDK ++ + +YLSSR ++ S LQQLYH+EG+S
Sbjct: 40 QVERVVLFFLTQQGDFAKTLQE------------------------------LRTQQLQLAPGDMEAMHSIADM-YRRVGDDLVQLLHFVELNATGIRKILKKHDKTLKEHKIMGSYLSSRTDSQASHLQQLYHDEGIS 147 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18251.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18251.1.1 >prot_P-wetherbeei_contig18251.1.1 ID=prot_P-wetherbeei_contig18251.1.1|Name=mRNA_P-wetherbeei_contig18251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=220bp MRERAMSRSNSLVILVRRNSGLPAASAAVDALEDDFARFLDAEVEKVVLFback to top mRNA from alignment at P-wetherbeei_contig18251:126..1368+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18251.1.1 ID=mRNA_P-wetherbeei_contig18251.1.1|Name=mRNA_P-wetherbeei_contig18251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1243bp|location=Sequence derived from alignment at P-wetherbeei_contig18251:126..1368+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18251:126..1368+ >mRNA_P-wetherbeei_contig18251.1.1 ID=mRNA_P-wetherbeei_contig18251.1.1|Name=mRNA_P-wetherbeei_contig18251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=660bp|location=Sequence derived from alignment at P-wetherbeei_contig18251:126..1368+ (Phaeothamnion wetherbeei SAG_119_79)back to top |