mRNA_P-wetherbeei_contig18249.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18249.1.1 vs. uniprot
Match: D7FJD4_ECTSI (Homeobox domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FJD4_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 3.730e-22 Identity = 53/110 (48.18%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 1 KRQRLPRSAVSAMRDWMQRHWDAPVPSDQQKAEFVRTLGITKRQASPIATENWFINARMRVWRPAMRKALGEAQQSGSTETFLALLSRCSHDNLFRSFLSAQEDSMGGGS 330
KR RLP +AV MR W+ +HWD PVP+ ++K F IT +Q ENWFIN RMR WRPAMR+AL A+++GS F LL + N+F+ FL +E MG GS
Sbjct: 223 KRSRLPAAAVKEMRTWLDQHWDDPVPTHEEKNSFAIKHDITTKQV-----ENWFINIRMREWRPAMRRALDHAEETGSYAEFSRLLQHTAEGNVFKKFL--EERQMGHGS 325
BLAST of mRNA_P-wetherbeei_contig18249.1.1 vs. uniprot
Match: A0A6A2ZFB4_HIBSY (BEL1-like homeodomain protein 1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2ZFB4_HIBSY) HSP 1 Score: 64.3 bits (155), Expect = 1.030e-9 Identity = 38/116 (32.76%), Postives = 60/116 (51.72%), Query Frame = 1
Query: 13 LPRSAVSAMRDWMQRHWDAPVPSDQQKAEFVRTLGITKRQASPIATENWFINARMRVWRPAMRKA----LGEAQQSGSTETFLALLS------------RCSHDNLFRSFLSAQED 312
LP +VS +R W+ H+ P P D K + G+T+ Q S NWFINAR+R+W+P + + + E +++GS E L+ +CS DN+ +SF S Q++
Sbjct: 354 LPERSVSVLRSWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVS-----NWFINARVRLWKPMVEEMYLEEIKEYERNGSKEKTSKSLNDEDSTSKSTAPDKCSADNMAKSFSSKQDN 464
BLAST of mRNA_P-wetherbeei_contig18249.1.1 vs. uniprot
Match: A0A166AGC8_DAUCS (Homeobox domain-containing protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166AGC8_DAUCS) HSP 1 Score: 63.5 bits (153), Expect = 1.890e-9 Identity = 32/98 (32.65%), Postives = 55/98 (56.12%), Query Frame = 1
Query: 13 LPRSAVSAMRDWMQRHWDAPVPSDQQKAEFVRTLGITKRQASPIATENWFINARMRVWRPAM----RKALGEAQQSGSTETFLALLSRCSHDNLFRSF 294
LP S+VS +R W+ H+ P P D +K+ R G+T+ Q + NWFINAR+R+W+P + ++ G+ + E +++S ++D+ R F
Sbjct: 416 LPESSVSVLRAWLFEHFLNPYPKDSEKSMLARKAGLTRSQVA-----NWFINARVRLWKPMVEDMYKEEFGDLESDKKEEVKESVMSGATYDDHLRQF 508
BLAST of mRNA_P-wetherbeei_contig18249.1.1 vs. uniprot
Match: UPI0010A40214 (BEL1-like homeodomain protein 7 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A40214) HSP 1 Score: 62.8 bits (151), Expect = 3.250e-9 Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 13 LPRSAVSAMRDWMQRHWDAPVPSDQQKAEFVRTLGITKRQASPIATENWFINARMRVWRPAM----RKALGEAQQSGSTET 243
LP +VS +R W+ H+ P P D +KA R G+T+ Q S NWFINAR+R+W+P + ++ +G+A + S+ T
Sbjct: 157 LPEGSVSILRAWLFEHFLHPYPKDSEKAMLARQTGLTRSQVS-----NWFINARVRLWKPMIEEMYKEEIGDADLNSSSST 232
BLAST of mRNA_P-wetherbeei_contig18249.1.1 vs. uniprot
Match: UPI0010A39636 (BEL1-like homeodomain protein 6 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A39636) HSP 1 Score: 62.8 bits (151), Expect = 3.530e-9 Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 13 LPRSAVSAMRDWMQRHWDAPVPSDQQKAEFVRTLGITKRQASPIATENWFINARMRVWRPAM----RKALGEAQQSGSTET 243
LP +VS +R W+ H+ P P D +KA R G+T+ Q S NWFINAR+R+W+P + ++ +G+A + S+ T
Sbjct: 381 LPEGSVSILRAWLFEHFLHPYPKDSEKAMLARQTGLTRSQVS-----NWFINARVRLWKPMIEEMYKEEIGDADLNSSSST 456
BLAST of mRNA_P-wetherbeei_contig18249.1.1 vs. uniprot
Match: A0A0K9PXC2_ZOSMR (BEL1-like homeodomain 7 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PXC2_ZOSMR) HSP 1 Score: 62.4 bits (150), Expect = 4.710e-9 Identity = 31/90 (34.44%), Postives = 50/90 (55.56%), Query Frame = 1
Query: 13 LPRSAVSAMRDWMQRHWDAPVPSDQQKAEFVRTLGITKRQASPIATENWFINARMRVWRPAMRKALGEAQQSGSTETFLALLSRCSHDNL 282
LP ++VS +R W+ H+ P P D K+ R G+T+ Q S NWFINAR+R+W+P + + E +G ++ L + S +N+
Sbjct: 302 LPENSVSILRAWLFEHFLHPYPKDSDKSMLARQTGLTRNQVS-----NWFINARVRLWKPMVEEMYREETSNGELDSNLNSNTNFSSENV 386
BLAST of mRNA_P-wetherbeei_contig18249.1.1 vs. uniprot
Match: UPI001CFCAF56 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFCAF56) HSP 1 Score: 62.0 bits (149), Expect = 6.470e-9 Identity = 26/81 (32.10%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 1 KRQRLPRSAVSAMRDWMQRHWDAPVPSDQQKAEFVRTLGITKRQASPIATENWFINARMRVWRPAMRKALGEAQQSGSTET 243
KR +P+ A + + +W++RH+D P PS+++K E +T +T Q + WF+N+R+R+W+P + E + S S+++
Sbjct: 135 KRFNIPKHARAVLMEWLERHFDHPYPSEEEKEELCKTTKLTMSQIN-----TWFVNSRIRIWKPKVEPGQKEEKTSSSSQS 210
BLAST of mRNA_P-wetherbeei_contig18249.1.1 vs. uniprot
Match: A0A833RB99_9POAL (BEL1-like homeodomain protein 6-like isoform X1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833RB99_9POAL) HSP 1 Score: 62.0 bits (149), Expect = 6.500e-9 Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 1
Query: 13 LPRSAVSAMRDWMQRHWDAPVPSDQQKAEFVRTLGITKRQASPIATENWFINARMRVWRPAM----RKALGEAQQSGSTETFLALLSR 264
LP ++VS +R W+ H+ P PSD +K R G+T+ Q S NWFINAR+R+W+P + ++ +GEA+ ++ + A SR
Sbjct: 326 LPENSVSVLRAWLFEHFLHPYPSDSEKLMLARQTGLTRGQIS-----NWFINARVRLWKPMIEDMYKEEIGEAENISNSSSENAPASR 408
BLAST of mRNA_P-wetherbeei_contig18249.1.1 vs. uniprot
Match: G7I5U5_MEDTR (BEL1-related homeotic protein n=5 Tax=Trifolieae TaxID=163742 RepID=G7I5U5_MEDTR) HSP 1 Score: 62.0 bits (149), Expect = 6.600e-9 Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 1
Query: 13 LPRSAVSAMRDWMQRHWDAPVPSDQQKAEFVRTLGITKRQASPIATENWFINARMRVWRPAMRKALGEAQQSGSTETFLALLS 261
LP S+VS +R W+ H+ P P D +K R G+T+ Q + NWFINAR+R+W+P + + E + G +ET LLS
Sbjct: 363 LPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVA-----NWFINARVRLWKPMVEEMYKE--EFGDSETSSNLLS 438
BLAST of mRNA_P-wetherbeei_contig18249.1.1 vs. uniprot
Match: UPI00125E6803 (BEL1-like homeodomain protein 7 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125E6803) HSP 1 Score: 58.5 bits (140), Expect = 7.390e-9 Identity = 28/68 (41.18%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 13 LPRSAVSAMRDWMQRHWDAPVPSDQQKAEFVRTLGITKRQASPIATENWFINARMRVWRPAMRKALGE 216
LP S+VS +R W+ H+ P P D KA R G+T+ Q S NWFINAR+++W+P + + E
Sbjct: 13 LPESSVSILRAWLFEHFLHPYPKDSDKAMLARQTGLTRGQVS-----NWFINARVQLWKPMVEEIYKE 75 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18249.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18249.1.1 >prot_P-wetherbeei_contig18249.1.1 ID=prot_P-wetherbeei_contig18249.1.1|Name=mRNA_P-wetherbeei_contig18249.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp KRQRLPRSAVSAMRDWMQRHWDAPVPSDQQKAEFVRTLGITKRQASPIATback to top mRNA from alignment at P-wetherbeei_contig18249:28..959- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18249.1.1 ID=mRNA_P-wetherbeei_contig18249.1.1|Name=mRNA_P-wetherbeei_contig18249.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=932bp|location=Sequence derived from alignment at P-wetherbeei_contig18249:28..959- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18249:28..959- >mRNA_P-wetherbeei_contig18249.1.1 ID=mRNA_P-wetherbeei_contig18249.1.1|Name=mRNA_P-wetherbeei_contig18249.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig18249:28..959- (Phaeothamnion wetherbeei SAG_119_79)back to top |