mRNA_P-wetherbeei_contig1823.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1823.1.2
Unique NamemRNA_P-wetherbeei_contig1823.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1823.1.2 vs. uniprot
Match: D8LU47_ECTSI (T-complex protein 1 subunit gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU47_ECTSI)

HSP 1 Score: 858 bits (2217), Expect = 5.670e-309
Identity = 433/526 (82.32%), Postives = 473/526 (89.92%), Query Frame = 3 
Query:  135 MQAPVMVLPVNTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLAVAEPFLSQSIHPTQVVSGYARALETALQTCRDLSRTVDMNDRMQLKGVVESCVGTKFSSRWGDLLVDMAIDAVTKVVVSDPDGRKEVDIKRYVRVEKIPGGELADCRVLDGVMFNKDVTHPKMRRRIERPRVLLLDCPLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVAFRPDIVITEKGVSDLAQHYFMKAKITAFRRIRKTDNNRIARAVGATIVARPDEIQESDIGTGCGLFEVRKIGDEYFAFLEKCSEPKACTVLLRGGSKDVINEVERNLTDAMQVVRNVVFEPRLLPGGGATEMCIAQALMRQSQEVEGVQQWPYQAVAAALEVIPRTLAQNCGANVVRALTQLRAKHSNTPNSTWGIDGTTGQLADMTTLGIWEPYAVKLQTFKTAIEAACMILRIDDIVSGTR 1712
            M APVMVLPVNTKRETGR+AQLGNI AAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GE+L+VAEP L++ +HPTQ+V GYARAL+TAL  C  L+ T+D+++  QLK +V++ VGTKFS RWGD LV MAIDAV K V +  DGR EVD+KRY RVEKIPGGE+ DC VLDGVMFNKDVTH KMRRRIE PRVLLLDCPLEYKKGESQTNVE+TKEEDWNTLLRMEEEYIENICAQIVAF PDIVITEKGVSDLAQHY MKA ITAFRR+RKTDNNRIARAVGAT+V+RPDEIQESDIGTGCGLFEVRKIGDEYF FLE C + KACTVLLRGGSKDV+NEVERNL DAMQVVRNVVFEPRLLPGGGATEM ++QAL +++QEVEGVQQW ++A A+ALEVIPRTLAQNCGANVVR LTQLRAKH+N    TWGIDGTTG + DM  LGIWEP+ VK QT+KTA+EAACMILRIDDIVSG +
Sbjct:    1 MSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAV-KRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIK 525
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BLAST of mRNA_P-wetherbeei_contig1823.1.2 vs. uniprot
Match: A0A836CR16_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR16_9STRA)

HSP 1 Score: 847 bits (2188), Expect = 2.550e-304
Identity = 428/544 (78.68%), Postives = 476/544 (87.50%), Query Frame = 3 
Query:  144 PVMVLPVNTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLAVAEPFLSQSIHPTQVVSGYARALETALQTCRDLSRTVDMNDRMQLKGVVESCVGTKFSSRWGDLLVDMAIDAVTKVVVSDPDGRKEVDIKRYVRVEKIPGGELADCRVLDGVMFNKDVTHPKMRRRIERPRVLLLDCPLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVAFRPDIVITEKGVSDLAQHYFMKAKITAFRRIRKTDNNRIARAVGATIVARPDEIQESDIGTGCGLFEVRKIGDEYFAFLEKCSEPKACTVLLRGGSKDVINEVERNLTDAMQVVRNVVFEPRLLPGGGATEMCIAQALMRQSQEVEGVQQWPYQAVAAALEVIPRTLAQNCGANVVRALTQLRAKHSNTPNS------------------TWGIDGTTGQLADMTTLGIWEPYAVKLQTFKTAIEAACMILRIDDIVSGTRAKK 1721
            PVMVLP+NTKRETGR+AQLGNI+AAKAV++IIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGE+LA AEP L Q +HPTQ+V GYA AL+ AL+TC  +S+ VD+ DR  LK +VE+ VGTKFS RWGD+LV MAIDAVTKVV  D DGR EVD+KRYVRVEK+PGGEL  CRVLDGVMFNKDVTH +MRRRIE PR+LLLDCPLEYKKGES TNVE+T+E+DWNTLLRMEEEY+ENICAQIVAF+PDIVITEKGVSDLAQHYFMKA IT FRR+RK+DNNR+ARAVGATIV+RPDEIQESDIGTGCGLFEVRKIGDEYFAFLE+C +PKACTVLLRGGSKDV+NEVERNL DAMQVVRNVVFEPRLLPGGGATEM +A AL R ++  +G Q+WP  AVA A E IPRTLAQNCGA+VVR LTQLRAKH+  P +                  TWGI+G TG+LADM TLG+WEPY+VK+QT+KTAIEAACMILRIDDIVSG + K+
Sbjct:    5 PVMVLPINTKRETGRTAQLGNISAAKAVSEIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLAAAEPLLLQHLHPTQIVRGYAHALQVALETCTAVSKVVDLKDRAALKELVEAAVGTKFSHRWGDILVGMAIDAVTKVVC-DVDGRTEVDVKRYVRVEKVPGGELDQCRVLDGVMFNKDVTHARMRRRIESPRILLLDCPLEYKKGESATNVEVTQEDDWNTLLRMEEEYVENICAQIVAFKPDIVITEKGVSDLAQHYFMKANITCFRRLRKSDNNRVARAVGATIVSRPDEIQESDIGTGCGLFEVRKIGDEYFAFLEQCKDPKACTVLLRGGSKDVLNEVERNLQDAMQVVRNVVFEPRLLPGGGATEMAVAAALTRAAEAADGAQRWPVAAVAGAFEAIPRTLAQNCGASVVRTLTQLRAKHA-APAAXXXXXXXXXXXXXAHTGVTWGINGVTGELADMDTLGVWEPYSVKVQTYKTAIEAACMILRIDDIVSGVKTKR 546
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BLAST of mRNA_P-wetherbeei_contig1823.1.2 vs. uniprot
Match: A0A7S2FP00_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FP00_9STRA)

HSP 1 Score: 833 bits (2152), Expect = 1.280e-298
Identity = 413/529 (78.07%), Postives = 469/529 (88.66%), Query Frame = 3 
Query:  120 PSEVTMQAPVMVLPVNTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLAVAEPFLSQSIHPTQVVSGYARALETALQTCRDLSRTVDMNDRMQLKGVVESCVGTKFSSRWGDLLVDMAIDAVTKVVVSDPDGRKEVDIKRYVRVEKIPGGELADCRVLDGVMFNKDVTHPKMRRRIERPRVLLLDCPLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVAFRPDIVITEKGVSDLAQHYFMKAKITAFRRIRKTDNNRIARAVGATIVARPDEIQESDIGTGCGLFEVRKIGDEYFAFLEKCSEPKACTVLLRGGSKDVINEVERNLTDAMQVVRNVVFEPRLLPGGGATEMCIAQALMRQSQEVEGVQQWPYQAVAAALEVIPRTLAQNCGANVVRALTQLRAKHSNTPNSTWGIDGTTGQLADMTTLGIWEPYAVKLQTFKTAIEAACMILRIDDIVSG 1706
            P  + MQAPVMVL  NTKRETGR+AQLGNI AAKAV+DIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIIL+GE+L +AEPFL ++IHPT +VSGY +AL+ AL  C+ ++  VD++D  Q+  +V S +GTKFSSR+GD +V++A+ AV KVV    DG+KEVDIKRYV+ EKIPGGEL+DC VL+GVMFNKDVTH KMRRRIE PRVLLLDCPLEYKKGESQTNVEITKEEDW+TLLRMEEEYIEN+CAQIVA +PDIVITEKGVSDLAQHY +KA ITAFRR+RKTDNNR+ARA GATIV+RPDEIQESD+GTGCGLFEVRKIGDEYF F+E+C++PKACTVLLRGGSKDV+NE+ERNL DAMQV+RNVVFEP LLPGGGATEM + QAL R S  +EGV+QWPY A   ALEVIPRTLA+NCGANV+R +TQLR KH    N+TWGIDGTTG+LADM  LG+WEP+ VK+QT KTA+EAACMILRIDDIVSG
Sbjct:   25 PYSLIMQAPVMVLNTNTKRETGRTAQLGNIMAAKAVSDIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILSGEILCLAEPFLMRNIHPTVIVSGYNKALQEALVVCKQMAVPVDLDDTKQMTDIVRSTIGTKFSSRFGDQMVNLALTAVRKVVKEGADGKKEVDIKRYVKTEKIPGGELSDCCVLNGVMFNKDVTHAKMRRRIENPRVLLLDCPLEYKKGESQTNVEITKEEDWDTLLRMEEEYIENMCAQIVAVKPDIVITEKGVSDLAQHYLLKANITAFRRLRKTDNNRVARATGATIVSRPDEIQESDVGTGCGLFEVRKIGDEYFVFMEECADPKACTVLLRGGSKDVLNEIERNLGDAMQVIRNVVFEPLLLPGGGATEMAVGQALARSSVGLEGVEQWPYVAAGKALEVIPRTLAENCGANVIRVMTQLRTKHLTLDNATWGIDGTTGKLADMQDLGLWEPFVVKVQTLKTAMEAACMILRIDDIVSG 553
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BLAST of mRNA_P-wetherbeei_contig1823.1.2 vs. uniprot
Match: A0A7S2SP58_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP58_9STRA)

HSP 1 Score: 830 bits (2144), Expect = 7.150e-298
Identity = 411/528 (77.84%), Postives = 471/528 (89.20%), Query Frame = 3 
Query:  135 MQAPVMVLPVNTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLAVAEPFLSQSIHPTQVVSGYARALETALQTCRDLSRTVDMNDRMQLKGVVESCVGTKFSSRWGDLLVDMAIDAVTKVVVSDP-DGRKEVDIKRYVRVEKIPGGELADCRVLDGVMFNKDVTHPKMRRRIERPRVLLLDCPLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVAFRPDIVITEKGVSDLAQHYFMKAKITAFRRIRKTDNNRIARAVGATIVARPDEIQESDIGTGCGLFEVRKIGDEYFAFLEKCSEPKACTVLLRGGSKDVINEVERNLTDAMQVVRNVVFEPRLLPGGGATEMCIAQALMRQS-QEVEGVQQWPYQAVAAALEVIPRTLAQNCGANVVRALTQLRAKHSNTPNSTWGIDGTTGQLADMTTLGIWEPYAVKLQTFKTAIEAACMILRIDDIVSGTR 1712
            MQAPVMVL   TKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVI+L GE L +AEPF+ +++HPT +VSG+ RAL+ +L+ C+ ++  VD+ DR Q+  +V+S +GTKFS+RWG  ++DMA+ AV +VV  D   G+KEVDIKRYV+ EK+PGGEL+DC+VLDGVMFNKDVTH KMRRRIE PR+LLLDCPLEYKKGESQTNVEITKEEDW+TLLRMEEEYIEN+CAQIVA RPDIVITEKGVSDLAQHY +KA ITAFRR+RKTDNNR+ARA GATIV+RPDEIQESD+GTGCGLFEV+KIGDEYF FL +C +PKACTVLLRGGSKDV+NE+ERNL+DAMQV+RNVVFEP LLPGGGATEM + QAL R +  +VEGVQQWP+ A+  ALEVIPRTLAQNCGANVVR +TQLRAKH++  +STWGIDG TG+LADM  +G+WEPY VK+QT KT+IEAACMILRIDDIVSG +
Sbjct:    1 MQAPVMVLNTTTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIVLTGETLLLAEPFIVRNVHPTVIVSGFTRALQHSLEVCKRVAVKVDLEDRAQMMSIVQSSIGTKFSARWGAQMIDMALTAVLRVVHEDGGSGQKEVDIKRYVKTEKLPGGELSDCQVLDGVMFNKDVTHAKMRRRIENPRILLLDCPLEYKKGESQTNVEITKEEDWDTLLRMEEEYIENLCAQIVAVRPDIVITEKGVSDLAQHYLLKANITAFRRLRKTDNNRVARACGATIVSRPDEIQESDVGTGCGLFEVKKIGDEYFTFLTQCQDPKACTVLLRGGSKDVLNEIERNLSDAMQVIRNVVFEPLLLPGGGATEMAVGQALARDAASKVEGVQQWPFAAIGKALEVIPRTLAQNCGANVVRVMTQLRAKHTSLDSSTWGIDGATGKLADMKDMGLWEPYNVKVQTLKTSIEAACMILRIDDIVSGMK 528
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BLAST of mRNA_P-wetherbeei_contig1823.1.2 vs. uniprot
Match: W7TWK9_9STRA (T-complex protein 1 subunit gamma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWK9_9STRA)

HSP 1 Score: 828 bits (2138), Expect = 6.780e-297
Identity = 411/535 (76.82%), Postives = 471/535 (88.04%), Query Frame = 3 
Query:  135 MQAPVMVLPVNTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLAVAEPFLSQSIHPTQVVSGYARALETALQTCRDLSRTVDMNDRMQLKGVVESCVGTKFSSRWGDLLVDMAIDAVTKVVVS------DPDGRKEVDIKRYVRVEKIPGGELADCRVLDGVMFNKDVTHPKMRRRIERPRVLLLDCPLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVAFRPDIVITEKGVSDLAQHYFMKAKITAFRRIRKTDNNRIARAVGATIVARPDEIQESDIGTGCGLFEVRKIGDEYFAFLEKCSEPKACTVLLRGGSKDVINEVERNLTDAMQVVRNVVFEPRLLPGGGATEMCIAQALMRQSQEVEGVQQWPYQAVAAALEVIPRTLAQNCGANVVRALTQLRAKHSNTPNSTWGIDGTTGQLADMTTLGIWEPYAVKLQTFKTAIEAACMILRIDDIVSGTRAKK 1721
            M APVMVL  NTKRETGR+AQLGNIAAAKAV+DI+RTTLGPR+MLKMLLDPMGGIVITNDG+CILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGE+LA AEPFL ++IHPTQ+V+GY++AL+ AL+ C  L++ +D+ND+  L  +V +CVGTKFSSRWG  +VD+A+D+V KVV           G KE D+KRYVRVEKIPGGEL D +V+DGVMFNKDVTH KMRRRIE+PR+LLLDCPLEYKKGESQTNVE+ +EEDWNTLLRMEEE+IE +CA+IVAFRPDIVITEKGVSDLAQHY +KA +TAFRR+RK+DNNRIARAVGA IV+RPDEIQE D+GTGCGLFEVRKIGDEYFAFLE+C +P+ACTVLLRGGSKDV+NEVERNL DA+QVVRN+VFE +LLPGGGATEM + QAL R S EVEGVQQWPY+AV  ALEVIPRTLAQNCG NV+R +TQLRAKH+  P +TWGIDG  G L  M TLG+WEPYAVK+QT KTA+EAACM+LRIDD+VSG + KK
Sbjct:    2 MNAPVMVLNANTKRETGRTAQLGNIAAAKAVSDIVRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLAQAEPFLHRNIHPTQIVAGYSKALQEALKVCNALAKPIDVNDKQALSQIVSACVGTKFSSRWGPFMVDLAVDSVLKVVRQVGGEGGAEGGYKECDVKRYVRVEKIPGGELGDSKVIDGVMFNKDVTHSKMRRRIEKPRILLLDCPLEYKKGESQTNVEVKQEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGAVIVSRPDEIQEGDVGTGCGLFEVRKIGDEYFAFLEQCEQPQACTVLLRGGSKDVLNEVERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARASTEVEGVQQWPYKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHAQGP-TTWGIDGEKGILVPMETLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKKK 535
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BLAST of mRNA_P-wetherbeei_contig1823.1.2 vs. uniprot
Match: A0A6S9KVF4_HETAK (T-complex protein 1 subunit gamma n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KVF4_HETAK)

HSP 1 Score: 818 bits (2112), Expect = 4.690e-293
Identity = 408/529 (77.13%), Postives = 463/529 (87.52%), Query Frame = 3 
Query:  135 MQAPVMVLPVNTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLAVAEPFLSQSIHPTQVVSGYARALETALQTCRDLSRTVDMNDRMQLKGVVESCVGTKFSSRWGDLLVDMAIDAVTKVVVSDPDGRKEVDIKRYVRVEKIPGGELADCRVLDGVMFNKDVTHPKMRRRIERPRVLLLDCPLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVAFRPDIVITEKGVSDLAQHYFMKAKITAFRRIRKTDNNRIARAVGATIVARPDEIQESDIGTGCGLFEVRKIGDEYFAFLEKCSEPKACTVLLRGGSKDVINEVERNLTDAMQVVRNVVFEPRLLPGGGATEMCIAQALMRQSQEVEGVQQWPYQAVAAALEVIPRTLAQNCGANVVRALTQLRAKHSNTPNSTWGIDGTTGQLADMTTLGIWEPYAVKLQTFKTAIEAACMILRIDDIVSGTRAKK 1721
            MQAPVMVL  NT+RE GRSAQL NI AAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILRE+DV+HPAAKSMIELSRAQDEEVGDGTTSVIILAGE+LA+AEPFLSQ IHPT +V GY RA+  AL  C++++  VD+NDR Q+  +VE+ +GTKFSSRW   LV MAIDAV KVV  D DGRKEVDIKRY RVEKIPGGE+ DCRVLDGVMFNKD+THPKMR+ IE PRV+LLDC LEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVA RPD+VITEKGVSDLAQHYF+KA ITAFRR+RK+DNNR+ARA GATIV+R +E++E DIGTGCG FE+RK+GDE+FAF E C+E KACT+LLRGGSKDV+NEVERNL DAMQVVRN+V+EPRLLPGGGATEM +A  L + +  VEG  ++P+ AV  ALEVIPRTLAQNCGANVVRALTQLRAKH++  N TWG+DG TG + DM   G+WEP+AVK+QTFKTA+EA CM+LRIDDIVSG + +K
Sbjct:    1 MQAPVMVLNTNTQREHGRSAQLSNIQAAKAVADIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREIDVTHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLALAEPFLSQDIHPTVIVQGYMRAMTLALDVCKEIAMDVDVNDRAQMTQLVEATLGTKFSSRWSSKLVGMAIDAVLKVV-KDDDGRKEVDIKRYCRVEKIPGGEMGDCRVLDGVMFNKDITHPKMRKSIENPRVMLLDCSLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVALRPDVVITEKGVSDLAQHYFVKAGITAFRRLRKSDNNRVARATGATIVSRTEELREEDIGTGCGRFEMRKVGDEWFAFFEACAEAKACTLLLRGGSKDVLNEVERNLQDAMQVVRNIVYEPRLLPGGGATEMAVAYELGKAALAVEGPARFPFAAVGQALEVIPRTLAQNCGANVVRALTQLRAKHTDPGNRTWGVDGETGAVRDMREAGVWEPFAVKVQTFKTAVEAGCMVLRIDDIVSGMKKRK 528
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BLAST of mRNA_P-wetherbeei_contig1823.1.2 vs. uniprot
Match: A0A7R9U7E4_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7E4_9STRA)

HSP 1 Score: 795 bits (2052), Expect = 1.870e-283
Identity = 394/530 (74.34%), Postives = 466/530 (87.92%), Query Frame = 3 
Query:  132 TMQAPVMVLPVNTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLAVAEPFLSQSIHPTQVVSGYARALETALQTCRDLSRTVDMNDRMQLKGVVESCVGTKFSSRWGDLLVDMAIDAVTKVVVSDPDGRKEVDIKRYVRVEKIPGGELADCRVLDGVMFNKDVTHPKMRRRIERPRVLLLDCPLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVAFRPDIVITEKGVSDLAQHYFMKAKITAFRRIRKTDNNRIARAVGATIVARPDEIQESDIGTGCGLFEVRKIGDEYFAFLEKCSEPKACTVLLRGGSKDVINEVERNLTDAMQVVRNVVFEPRLLPGGGATEMCIAQALMRQSQEVEGVQQWPYQAVAAALEVIPRTLAQNCGANVVRALTQLRAKHSNTPNSTWGIDGTTGQLADMTTLGIWEPYAVKLQTFKTAIEAACMILRIDDIVSGTRAKK 1721
            TMQ P+MV+ VNT+RETGR+AQLGNI AAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDG+ ILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGE+L++AEPFL ++IHPT VV GY RAL+ AL TC+++++ VD+ D   ++ +V++ VGT FSSR+G++++ +A+DAV +VV    D R EVDIKRY +VEKIPGGE+ADC VL+GVMFNK  TH KMRRRIE PR+LL DCPLEYKKGESQ NVEIT EED+ ++LRMEEEYIEN+C+ I+A RPDIV+TEKGVSDLAQHY  KA ITAFRR+RKTDNNRIARAVGATIV RP+E++ESD+GTGCGLFEVRKIGDEYF FLE+C + KACT++LRGGSKDV+NEVERNL DAMQVVRN+VFEP+LLPGGGATEMCIA+AL R++  VEGV QWP+QAV  ALEVIPRTLAQN GANV+R++T+LRAKH++    T+GI G TG++ADM   GIW+PY+VK+QTFKTAIE+ACMILRIDDIVSGT+  K
Sbjct:   28 TMQTPMMVMNVNTQRETGRAAQLGNIQAAKAVADIIRTTLGPRSMLKMLLDPMGGIVLTNDGHAILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLSMAEPFLERNIHPTLVVKGYTRALQVALNTCKEIAKHVDIEDTASIQELVKTAVGTTFSSRFGNIVIGLAVDAVRRVVTYSGD-RPEVDIKRYAKVEKIPGGEIADCAVLNGVMFNKVPTHAKMRRRIENPRILLFDCPLEYKKGESQANVEITNEEDFESMLRMEEEYIENLCSHIIALRPDIVVTEKGVSDLAQHYLTKAGITAFRRLRKTDNNRIARAVGATIVHRPEEVRESDLGTGCGLFEVRKIGDEYFTFLEECKDAKACTIMLRGGSKDVLNEVERNLQDAMQVVRNIVFEPKLLPGGGATEMCIAEALSREASNVEGVDQWPFQAVGQALEVIPRTLAQNAGANVIRSITELRAKHASGGCRTYGIHGHTGRIADMAEEGIWDPYSVKVQTFKTAIESACMILRIDDIVSGTKKPK 556
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BLAST of mRNA_P-wetherbeei_contig1823.1.2 vs. uniprot
Match: A0A7S2XKF7_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKF7_9STRA)

HSP 1 Score: 767 bits (1981), Expect = 9.880e-273
Identity = 386/551 (70.05%), Postives = 452/551 (82.03%), Query Frame = 3 
Query:  138 QAPVMVLPVNTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLAVAEPFLSQSIHPTQVVSGYARALETALQTCRDLSRTVDMNDRMQLKGVVESCVGTKFSSRWGDLLVDMAIDAVTKVVVSDPDG------------RKEVDIKRYVRVEKIPGGELADCRVLDGVMFNKDVTHPKMRRRIERPRVLLLDCPLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVAFRPDIVITEKGVSDLAQHYFMKAKITAFRRIRKTDNNRIARAVGATIVARPDEIQESDIGTGCGLFEVRKIGDEYFAFLEKCSEPKACTVLLRGGSKDVINEVERNLTDAMQVVRNVVFEPRLLPGGGATEMCIAQALMRQSQEVEGVQQWPYQAVAAALEVIPRTLAQNCGANVVRALTQLRAKHS------------NTPNSTWGIDGTTGQLADMTTLGIWEPYAVKLQTFKTAIEAACMILRIDDIVSGTRAK 1718
            Q  VMVL  NTKRETGR AQ+GNIAAA+AVADIIRTTLGPRSMLKMLLDPMGG+VITNDGNCILREVDVSHP AKSMIELSR+QDEEVGDGTTSVIILAGE++  A PF++ ++HPT +V GY +AL+ AL  C   +  +D+ND + +K +VESC+GTKFSSRW D +VDMAI AV  V     +             + EVDIKRY +VEKIPGGE++D  VL GVMFNKDVTH KMRR+IE PR+LLLD PLEYKKGESQTNVEIT EEDWNT+L+MEEEY+EN+C +I+AF+PDIVITEKGVSDLAQH+F KA ITAFRR+RKTDNNR+ARA GATIV+R DEIQESDIGT CGLFE+RKIGDEYFAFLE+C +PKACT++LRGGSKDV+NE+ERNL+DAMQVVRNV+F+P+LLPGGGATEM +A  L R  Q+VEGVQQ P+ AV  A+EVIPRTLAQNCG +V+R +TQLRAKH+             T    WGI+G TG L DM  LGIWEP++VK+QT KTAIE+ACMILRIDDIVSG++ +
Sbjct:    4 QPQVMVLNQNTKRETGRQAQIGNIAAARAVADIIRTTLGPRSMLKMLLDPMGGVVITNDGNCILREVDVSHPTAKSMIELSRSQDEEVGDGTTSVIILAGEVMMKAGPFINNNLHPTVIVQGYNKALQEALLICERQALVIDINDTVLMKKLVESCIGTKFSSRWNDKMVDMAIAAVLTVARPSSNSPETSTAHTPYNHKMEVDIKRYAKVEKIPGGEISDSCVLKGVMFNKDVTHSKMRRKIENPRILLLDSPLEYKKGESQTNVEITDEEDWNTMLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHFFAKANITAFRRLRKTDNNRVARATGATIVSRTDEIQESDIGTNCGLFEMRKIGDEYFAFLEECKDPKACTIMLRGGSKDVLNEIERNLSDAMQVVRNVIFDPKLLPGGGATEMAVATGLRRAGQKVEGVQQGPFMAVGEAMEVIPRTLAQNCGVSVIRTVTQLRAKHAAAYDEAEKSTDEKTKPCNWGINGITGDLVDMEELGIWEPFSVKVQTIKTAIESACMILRIDDIVSGSKRR 554
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BLAST of mRNA_P-wetherbeei_contig1823.1.2 vs. uniprot
Match: A0A7R9Z0G9_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z0G9_9STRA)

HSP 1 Score: 765 bits (1975), Expect = 2.780e-271
Identity = 389/557 (69.84%), Postives = 450/557 (80.79%), Query Frame = 3 
Query:  144 PVMVLPVNTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLAVAEPFLSQSIHPTQVVSGYARALETALQTCRDLSRTVDMNDRMQLKGVVESCVGTKFSSRWGDLLVDMAIDAVTKVV----------VSDPDGRKEVDIKRYVRVEKIPGGELADCRVLDGVMFNKDVTHPKMRRRIERPRVLLLDCPLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVAFRPDIVITEKGVSDLAQHYFMKAKITAFRRIRKTDNNRIARAVGATIVARPDEIQESDIGTGCGLFEVRKIGDEYFAFLEKCSEPKACTVLLRGGSKDVINEVERNLTDAMQVVRNVVFEPRLLPGGGATEMCIAQALMRQSQEVEGVQQWPYQAVAAALEVIPRTLAQNCGANVVRALTQLRAKHS----------------------NTPNSTWGIDGTTGQLADMTTLGIWEPYAVKLQTFKTAIEAACMILRIDDIVSGTRAK 1718
            PVMVL   T+R+TGR AQLGNIAAA+AVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHP AKSMIELSRAQDEEVGDGTTSVIILAGE+L  AEPF+  ++HPT +V GY RAL+ AL+ C   +  VD+NDR ++  +V+S +GTKFSSRW D +V+MA+DAV  V           +   + + EVDIKRY +VEKIPGGE++D  VL GVMFNKDVTH KMRRRIE+PR+LLLD PLEYKKGESQTNVEIT +EDWNT+LRMEEEY+EN+C +I+AF+PD+VITEKGVSDLAQH+F KA ITAFRR+RKTDNNR+ARA GATIV+R DEIQESDIGT CGLFE+RKIG+EYFAF E+C +PKACTVLLRGGSKDV+NE+ERNL DAMQVVRNVV+EPRLLPGGGATEM +A  L R   +VEGVQQ P+ AV    EVIPRTLAQNCG +V+R +TQLRAKH+                        P   WGIDGTTG+L DM  LG+WEPY+VK+QT KTAIE+ACMILRIDDI SG++ K
Sbjct:   32 PVMVLNSKTQRKTGREAQLGNIAAARAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAQDEEVGDGTTSVIILAGEMLVTAEPFIRANLHPTVIVGGYNRALQEALKICERQALDVDVNDRERMMKLVQSSIGTKFSSRWNDKMVEMALDAVLCVARPSSSQSEDSIGPYNHKTEVDIKRYAKVEKIPGGEISDSYVLRGVMFNKDVTHSKMRRRIEKPRILLLDSPLEYKKGESQTNVEITNDEDWNTMLRMEEEYVENMCMEIIAFKPDVVITEKGVSDLAQHFFSKAGITAFRRLRKTDNNRMARATGATIVSRTDEIQESDIGTRCGLFEMRKIGEEYFAFFEECEDPKACTVLLRGGSKDVLNEIERNLQDAMQVVRNVVYEPRLLPGGGATEMAVAMGLRRAGLKVEGVQQGPFMAVGEGFEVIPRTLAQNCGVSVIRTVTQLRAKHAAALDVAEKADGEQSGGEDADRGKIPPCNWGIDGTTGELVDMEVLGVWEPYSVKVQTIKTAIESACMILRIDDICSGSKRK 588
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BLAST of mRNA_P-wetherbeei_contig1823.1.2 vs. uniprot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma n=3 Tax=Thalassiosiraceae TaxID=29202 RepID=TCPG_THAWE)

HSP 1 Score: 763 bits (1971), Expect = 3.780e-271
Identity = 383/549 (69.76%), Postives = 451/549 (82.15%), Query Frame = 3 
Query:  144 PVMVLPVNTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLAVAEPFLSQSIHPTQVVSGYARALETALQTCRDLSRTVDMNDRMQLKGVVESCVGTKFSSRWGDLLVDMAIDAVTKVV-----------VSDPDGRK-EVDIKRYVRVEKIPGGELADCRVLDGVMFNKDVTHPKMRRRIERPRVLLLDCPLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVAFRPDIVITEKGVSDLAQHYFMKAKITAFRRIRKTDNNRIARAVGATIVARPDEIQESDIGTGCGLFEVRKIGDEYFAFLEKCSEPKACTVLLRGGSKDVINEVERNLTDAMQVVRNVVFEPRLLPGGGATEMCIAQALMRQSQEVEGVQQWPYQAVAAALEVIPRTLAQNCGANVVRALTQLRAKHSNT------------PNSTWGIDGTTGQLADMTTLGIWEPYAVKLQTFKTAIEAACMILRIDDIVSGTRAK 1718
            P+MVL   T+R TGR AQLGNI AA+AVADIIR+TLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHP AKSMIELSRA DEEVGDGTTSVIILAGE+L  AEPF+  +IHPT +V GY  AL+ AL  C + +  VD++D  ++K +V+SC+G KFSSRW D+++DMA+ AV  V             +D   +K EVDIKRY +VEKIPGGE++DC VL GVMFNKDVTH KMRRRIE PR+LLLD PLEYKKGESQTNVEIT EEDWNTLL+MEEEY+EN+C +I+AF+PDIVITEKGVSDLAQHYF KA ITAFRR+RKTDNNR+ARA GATIV+R DEI+ESDIGTGCGLFE+RKIG+EYFAF E+C +PKACT++LRGGSKDV+NE+ERNLTDAMQVVRNVVF+PRLLPGGGATEM ++  L +   ++EG+QQ P+ AV  A+EVIPRTLAQNCG +V+R +TQLRAKH+              P   WGIDGTTG+L DM   G+WEP++VK+QT KTA+E+ACMILRIDDIVSG++ K
Sbjct:    8 PIMVLNSKTQRSTGRQAQLGNIQAARAVADIIRSTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLINAEPFVRTNIHPTIIVRGYNYALQEALTICEEWALVVDVHDSERVKSLVQSCIGAKFSSRWNDIMIDMALKAVLTVSRESRTPSFTPEANDVYAQKMEVDIKRYAKVEKIPGGEISDCAVLSGVMFNKDVTHSKMRRRIENPRILLLDTPLEYKKGESQTNVEITDEEDWNTLLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHYFAKANITAFRRLRKTDNNRVARATGATIVSRTDEIRESDIGTGCGLFEMRKIGEEYFAFFEECKDPKACTIILRGGSKDVLNEIERNLTDAMQVVRNVVFDPRLLPGGGATEMAVSVGLRKAGLKLEGIQQGPFLAVGDAMEVIPRTLAQNCGVSVIRTVTQLRAKHAAAYEDSETSGNGTFPKCNWGIDGTTGKLVDMEEFGVWEPFSVKVQTIKTAVESACMILRIDDIVSGSKKK 556
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1823.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU47_ECTSI5.670e-30982.32T-complex protein 1 subunit gamma n=1 Tax=Ectocarp... [more]
A0A836CR16_9STRA2.550e-30478.68T-complex protein 1 subunit gamma n=1 Tax=Tribonem... [more]
A0A7S2FP00_9STRA1.280e-29878.07T-complex protein 1 subunit gamma n=1 Tax=Florenci... [more]
A0A7S2SP58_9STRA7.150e-29877.84T-complex protein 1 subunit gamma n=1 Tax=Rhizochr... [more]
W7TWK9_9STRA6.780e-29776.82T-complex protein 1 subunit gamma n=2 Tax=Monodops... [more]
A0A6S9KVF4_HETAK4.690e-29377.13T-complex protein 1 subunit gamma n=1 Tax=Heterosi... [more]
A0A7R9U7E4_9STRA1.870e-28374.34T-complex protein 1 subunit gamma n=1 Tax=Pinguioc... [more]
A0A7S2XKF7_9STRA9.880e-27370.05T-complex protein 1 subunit gamma n=1 Tax=Attheya ... [more]
A0A7R9Z0G9_9STRA2.780e-27169.84T-complex protein 1 subunit gamma n=1 Tax=Pseudict... [more]
TCPG_THAWE3.780e-27169.76T-complex protein 1 subunit gamma n=3 Tax=Thalassi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1823contigP-wetherbeei_contig1823:769..4939 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LU47
Preferred nameCCT3
PFAMsCpn60_TCP1
Model size1991
Max annot lvl2759|Eukaryota
KEGG koko:K09495
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000902,GO:0001101,GO:0002199,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0005886,GO:0005975,GO:0006457,GO:0006458,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006884,GO:0007154,GO:0007165,GO:0007166,GO:0007338,GO:0007339,GO:0008037,GO:0008150,GO:0008152,GO:0008361,GO:0009311,GO:0009566,GO:0009653,GO:0009719,GO:0009725,GO:0009751,GO:0009826,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0009992,GO:0010033,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0014070,GO:0015630,GO:0016020,GO:0016043,GO:0016049,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019953,GO:0022414,GO:0022607,GO:0023052,GO:0030104,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031647,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032502,GO:0032535,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033043,GO:0033044,GO:0035036,GO:0036211,GO:0040007,GO:0042221,GO:0042493,GO:0042592,GO:0042623,GO:0043170,GO:0043209,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043933,GO:0044085,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045935,GO:0046677,GO:0046931,GO:0048518,GO:0048522,GO:0048589,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051052,GO:0051054,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051704,GO:0051716,GO:0055082,GO:0060255,GO:0060341,GO:0060560,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070202,GO:0070203,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090066,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0101031,GO:0140096,GO:1901564,GO:1901700,GO:1901998,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904951,GO:2000112,GO:2000278,GO:2000573,GO:2001252
Exons9
Evalue2.81e-312
EggNOG OGsCOG0459@1|root,KOG0364@2759|Eukaryota
Ec32 ortholog descriptionT-complex protein 1, gamma subunit
Ec32 orthologEc-16_000190.1
Descriptionunfolded protein binding
Cds size1593
COG categoryO
BRITEko00000,ko03036,ko03110,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1823.1.2prot_P-wetherbeei_contig1823.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1823 1033..4805 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186140.1490874-UTR-P-wetherbeei_contig1823:768..10321683186140.1490874-UTR-P-wetherbeei_contig1823:768..1032Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1823 769..1032 -
1683186140.243885-UTR-P-wetherbeei_contig1823:4805..49391683186140.243885-UTR-P-wetherbeei_contig1823:4805..4939Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1823 4806..4939 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186140.1612248-CDS-P-wetherbeei_contig1823:1032..10951683186140.1612248-CDS-P-wetherbeei_contig1823:1032..1095Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1823 1033..1095 -
1683186140.1798544-CDS-P-wetherbeei_contig1823:1340..14721683186140.1798544-CDS-P-wetherbeei_contig1823:1340..1472Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1823 1341..1472 -
1683186140.189236-CDS-P-wetherbeei_contig1823:1814..20271683186140.189236-CDS-P-wetherbeei_contig1823:1814..2027Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1823 1815..2027 -
1683186140.1967402-CDS-P-wetherbeei_contig1823:2233..23481683186140.1967402-CDS-P-wetherbeei_contig1823:2233..2348Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1823 2234..2348 -
1683186140.2040565-CDS-P-wetherbeei_contig1823:2661..28311683186140.2040565-CDS-P-wetherbeei_contig1823:2661..2831Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1823 2662..2831 -
1683186140.2116578-CDS-P-wetherbeei_contig1823:3058..32131683186140.2116578-CDS-P-wetherbeei_contig1823:3058..3213Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1823 3059..3213 -
1683186140.2190862-CDS-P-wetherbeei_contig1823:3486..36911683186140.2190862-CDS-P-wetherbeei_contig1823:3486..3691Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1823 3487..3691 -
1683186140.2263248-CDS-P-wetherbeei_contig1823:4068..43101683186140.2263248-CDS-P-wetherbeei_contig1823:4068..4310Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1823 4069..4310 -
1683186140.2366416-CDS-P-wetherbeei_contig1823:4507..48051683186140.2366416-CDS-P-wetherbeei_contig1823:4507..4805Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1823 4508..4805 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1823.1.2

>prot_P-wetherbeei_contig1823.1.2 ID=prot_P-wetherbeei_contig1823.1.2|Name=mRNA_P-wetherbeei_contig1823.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=531bp
MQAPVMVLPVNTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLD
PMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILA
GELLAVAEPFLSQSIHPTQVVSGYARALETALQTCRDLSRTVDMNDRMQL
KGVVESCVGTKFSSRWGDLLVDMAIDAVTKVVVSDPDGRKEVDIKRYVRV
EKIPGGELADCRVLDGVMFNKDVTHPKMRRRIERPRVLLLDCPLEYKKGE
SQTNVEITKEEDWNTLLRMEEEYIENICAQIVAFRPDIVITEKGVSDLAQ
HYFMKAKITAFRRIRKTDNNRIARAVGATIVARPDEIQESDIGTGCGLFE
VRKIGDEYFAFLEKCSEPKACTVLLRGGSKDVINEVERNLTDAMQVVRNV
VFEPRLLPGGGATEMCIAQALMRQSQEVEGVQQWPYQAVAAALEVIPRTL
AQNCGANVVRALTQLRAKHSNTPNSTWGIDGTTGQLADMTTLGIWEPYAV
KLQTFKTAIEAACMILRIDDIVSGTRAKKQ*
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mRNA from alignment at P-wetherbeei_contig1823:769..4939-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1823.1.2 ID=mRNA_P-wetherbeei_contig1823.1.2|Name=mRNA_P-wetherbeei_contig1823.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4171bp|location=Sequence derived from alignment at P-wetherbeei_contig1823:769..4939- (Phaeothamnion wetherbeei SAG_119_79)
CTTTGCAACCCACGAGCACCGAGTCTGCAACGTCTGGTAACGCTCTGGGC
AGCTACTCTCCCTCAAGATCCTCTAGGCTACCTTTTTTATCTCGAAGCGA
ACTCTTTTAGGCCGGACGGCCGTCGGAGGTCACCATGCAGGCCCCCGTGA
TGGTGTTGCCCGTCAACACGAAGCGTGAGACCGGAAGAAGTGCCCAGCTC
GGCAACATCGCTGCAGCAAAAGCGGTAGCCGACATAATCCGAACAACGCT
CGGCCCGCGCTCCATGCTCAAGATGCTACTGGACCCGATGGGAGGCATCG
TCATCACCAACGACGGCAACTGCATCCTCCGGGAAGTGGACGTTTCCCAC
CCGGCCGCCAAGAGTATGATTGAGCTCAGCCGCGCTCAAGACGAGGAAGT
CGGCGACGGCACCACCTCTGTCATCATCCTCGGTGAGCTGCAGTCATCCG
CTGCAACAGCAGCGGCCATAGCGGCTCGCCGGGGAGTTCTATGTCACTTA
TTACGGAGGATGATTGTCACAAGTTACCCTCACCAGTCACCCGTCTTTTT
CTCGCCCATACCTTTGCACAAAACTCTTATTCCACCCTCAACGACGATCA
CAAAACCTCTCTACCGGCACTAACGGCAGCGGGCGAGTTGCTTGCTGTGG
CGGAGCCCTTCCTCTCGCAGAGCATCCACCCGACCCAGGTGGTGTCGGGC
TATGCTCGCGCCCTCGAAACCGCTCTGCAGACGTGCCGCGACCTGAGCCG
GACGGTGGACATGAACGATCGGATGCAGCTGAAGGGCGTAGTGGAGTCGT
GCGTCGGCACCAAGTTCTCGTCCCGCTGGGGGGACCTTCTCGTCGACATG
GCCATCGACGCCGTTACCAAGGTGCGGAGCGGTGTTCGTCGGCTTTTTCG
GCAGTTATCGGCGTTACTAAGTCGGCAGTCATCGGCGTTACTAGTTTCTA
TGTTTAAGATTTGGGCCTGTGACGTTTCGCTGCTCAGTCTTGGTTGTCAG
AGGAGAGAAAGATCGGTGTTCCCTGGTGCGTTTTTTCGACGAGTGTGCAT
GCATTTCTGTTCAGAAGTTCTAATGAGCAGTTGCTCATATCTCTTCTAGT
CGAATTCAGGTGGCGAGCGGATGTTTTCGAGCTCTCTCATGTCCCTCGGA
CTGCCTTCCGACCGGCCCATCAATCAACCAAACAACTAAGCAAAACAACA
AAAACTCCAAATGCGAAAAACCTAACCAAACCCCCTAAACCCTTTCAGGT
GGTGGTGTCGGATCCGGACGGGCGGAAGGAGGTCGACATCAAGCGATACG
TACGCGTCGAGAAGATCCCCGGCGGCGAGCTGGCCGACTGCCGCGTGCTG
GACGGCGTTATGTTCAACAAGGACGTAACGCACCCCAAGATGAGGCGCCG
GATCGAGCGGCCGCGGGTGCTGCTGCTTGACTGCCCCCTCGAGTACAAGA
AGGGCGAGTCCTTTTTCCTTTCCGATATTAATTCGTCGACTAGGTTTCTG
AGTTTTGGCCACTGCTTAGAAAGGGTTTGTTCAAGAACCAGATGAGGTCT
CTGGTCAGAGCAACTACGGTTCAACGACGGTTAATTGCGCGTACCTGGCC
ATGGTTTGGCGCTTGCGTCCTATGAGAAGTGGCGGCTTTGTTCGTCCTTT
TTGTTACACCTCTCACTGACACGTGGTTACGCCACGCACTACCGTCGCAC
TGTCCGTCACATCGACAAACAAACAGGGGAGTCGCAGACGAACGTGGAGA
TCACCAAGGAGGAGGACTGGAACACTCTGCTGCGGATGGAGGAGGAATAC
ATCGAGAACATCTGCGCGCAGATCGTCGCTTTCCGCCCCGACATTGTCAT
CACCGAGAAGGGCGTCTCCGACCTCGCACAGGTTGGTCGGCCGATGGAGC
TGGGGGGATGGAATGTCTTTCTTTCTCTTTAGGGCGAGAGTGCTCTTCTC
CGCTTTTCTGTTCCTCTTTTCAATCTATATGCCAGCCTCCGCGGTAGCAT
AGAGGGCTTCTTTCTAAGCATGTCTGCCGTCCGGTGGCATCGCTCAACCG
CTGTCGCCTTCCGCCGCCGCTGCTGCCCGTCGACCAACAACCAAACAAAT
CGAAACAGCACTACTTCATGAAGGCAAAGATCACTGCTTTCCGGCGGATC
CGCAAGACGGACAACAACCGTATCGCGCGGGCGGTGGGCGCCACCATCGT
GGCACGGCCGGACGAGATCCAGGAGTCTGACATCGGCACCGGCTGCGGCC
TCTTTGAGGTCCGCAAGATCGGCGACGAGTAAGTGACCCCCCCCCCCCCC
CAAAACCCAATGTGTGTAGTTCTTGTTCTTCCCTTTCGAGATGCGTTTTG
CAGAAACGGTGGCGCCTTGTGGTTTTGTTGATGCGGTGGCAATGGTTTGA
AGAGGCAGCGGTGGCTGGTTGAGAATGCAGCGGTTGGAGCGGAGCGTCAC
GGCGGCTGCGACGACTGCGGCATTAGATCCATTCTTGCTATCATGCCACC
GCTCTTTGCTGTTTCCGGGCTCCCTGAGCTCTCCCTTCCTGACATTACCA
CTACCCGACGCACCAAAATGTTGACCGCTGCTCGAAACCAGGTACTTCGC
GTTCCTGGAGAAGTGCTCCGAACCGAAGGCGTGTACGGTGCTGCTGCGTG
GCGGCAGCAAGGACGTCATCAACGAGGTGGAGCGCAACCTCACCGACGCC
ATGCAGGTAACGCGCAGGGAGTAGCACCAAGTCAACTGCACTGCGCAAGT
GTTGCGTTCTCTCTTTTTCGTTTTTGACGTGTCATAAAGCGGGCAGCGTG
GGACGAGGAATTATGCTGGCCGGTCCGAAGGCGCAGCCCTCCTCCATCGG
TTTGTCTTATTTTCCGCCGCCGAAATCACGCCTCCGTCTGCCATTACTCG
CGCTGCTGCCAGGTGGTGCGCAACGTGGTGTTCGAGCCGCGGCTGCTCCC
TGGCGGCGGCGCTACGGAGATGTGCATCGCGCAGGCGCTCATGCGGCAGT
CGCAGGAGGTGGAGGGCGTGCAGCAATGGCCTTACCAGGCGGTGGCGGCG
GCGCTCGAGGTCATCCCGCGCACGCTGGCGCAAAATTGCGGGGCCAACGT
CGTCCGTGCCTTGACGCAGCTGCGGGTGCGAAGCGACGGAGAAAGGGATG
GAGAAAGGAATGAAACTTTTAAGGATAGTCTTGCGTAGTGCATTTCTCGG
GGAGCCGATGGCCTTGGTTGGTCGGCCTTGGTTGGTCGGCCTTTTTCTCT
TGCTTGTTCTTTGGGCTATTCTTTTTTCCTTGCGGTTTGATGGTGCTATT
GGGAAAGATGCAAGAGGAGGAAAAGGCGTACTGAAATTGCCGTTCTCGCC
GTCGCCGCTGCGGTCGCCCTTGCTACTCTCTTCGTCGTAGCCGCTGACGT
CCGCTCTTACCGCTATGTTCTTTTGCCGACGCCTATCGAACGGGTTCAAC
GGCCACGATTGCAACAGGCAAAACACTCGAACACGCCGAACTCCACGTGG
GGCATCGACGGCACGACGGGGCAGCTGGCGGACATGACGACGCTCGGCAT
CTGGGAGCCGTACGCGGTCAAGCTTCAGACCTTTAAGACCGCCATCGAGG
TGCGATGAACGAAGAGGAAACTCTCGTTATCTCCCTTCCTTTTTTGTTTT
TCTTGTTTTCTGGAGTTTTCTCTGCGTCGGCGGTCGTTAAGACGCGATCT
CGAAGGGAAACATGCCGTGCCAGTTTGGTGTATGCACCGCTGTATTTGAG
CTCTAATGTTTTGTGCTTCATCTTGGCCTCTGATGCATCTCCCATACCTC
AAACGATGCATTCTTTCTATCTCTTGGTGGCGTCCGGAGCGCAGGCGGCG
TGCATGATCCTGCGGATCGACGACATTGTCTCGGGGACGCGCGCGAAGAA
GCAGTAGCGGCGGGATTGCCGTCGTGCATTGTTGTCCAGCTGCGGCGAGG
CTGCAAGCGTCAGGGAGCTTTGGCGGGGCGGCAAGCGCCAGGGGGCGACG
GGACGGAGCTACTCTCTGCATCGGTGGATGTCAGGGAGGAGCGTCAGTTG
TGCTGGCAGAGGGCCATCTGGGGGGCCGTTACGCCGGGTTGAATTCGCGC
GCAACAGGAAAACAAAGAAACACACATCAAACCGCGTCAAACCTTATTAA
AAAGAAACAAATGCTGCCCCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1823:769..4939-

>mRNA_P-wetherbeei_contig1823.1.2 ID=mRNA_P-wetherbeei_contig1823.1.2|Name=mRNA_P-wetherbeei_contig1823.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1593bp|location=Sequence derived from alignment at P-wetherbeei_contig1823:769..4939- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGCCCCCGTGATGGTGTTGCCCGTCAACACGAAGCGTGAGACCGG
AAGAAGTGCCCAGCTCGGCAACATCGCTGCAGCAAAAGCGGTAGCCGACA
TAATCCGAACAACGCTCGGCCCGCGCTCCATGCTCAAGATGCTACTGGAC
CCGATGGGAGGCATCGTCATCACCAACGACGGCAACTGCATCCTCCGGGA
AGTGGACGTTTCCCACCCGGCCGCCAAGAGTATGATTGAGCTCAGCCGCG
CTCAAGACGAGGAAGTCGGCGACGGCACCACCTCTGTCATCATCCTCGCG
GGCGAGTTGCTTGCTGTGGCGGAGCCCTTCCTCTCGCAGAGCATCCACCC
GACCCAGGTGGTGTCGGGCTATGCTCGCGCCCTCGAAACCGCTCTGCAGA
CGTGCCGCGACCTGAGCCGGACGGTGGACATGAACGATCGGATGCAGCTG
AAGGGCGTAGTGGAGTCGTGCGTCGGCACCAAGTTCTCGTCCCGCTGGGG
GGACCTTCTCGTCGACATGGCCATCGACGCCGTTACCAAGGTGGTGGTGT
CGGATCCGGACGGGCGGAAGGAGGTCGACATCAAGCGATACGTACGCGTC
GAGAAGATCCCCGGCGGCGAGCTGGCCGACTGCCGCGTGCTGGACGGCGT
TATGTTCAACAAGGACGTAACGCACCCCAAGATGAGGCGCCGGATCGAGC
GGCCGCGGGTGCTGCTGCTTGACTGCCCCCTCGAGTACAAGAAGGGGGAG
TCGCAGACGAACGTGGAGATCACCAAGGAGGAGGACTGGAACACTCTGCT
GCGGATGGAGGAGGAATACATCGAGAACATCTGCGCGCAGATCGTCGCTT
TCCGCCCCGACATTGTCATCACCGAGAAGGGCGTCTCCGACCTCGCACAG
CACTACTTCATGAAGGCAAAGATCACTGCTTTCCGGCGGATCCGCAAGAC
GGACAACAACCGTATCGCGCGGGCGGTGGGCGCCACCATCGTGGCACGGC
CGGACGAGATCCAGGAGTCTGACATCGGCACCGGCTGCGGCCTCTTTGAG
GTCCGCAAGATCGGCGACGAGTACTTCGCGTTCCTGGAGAAGTGCTCCGA
ACCGAAGGCGTGTACGGTGCTGCTGCGTGGCGGCAGCAAGGACGTCATCA
ACGAGGTGGAGCGCAACCTCACCGACGCCATGCAGGTGGTGCGCAACGTG
GTGTTCGAGCCGCGGCTGCTCCCTGGCGGCGGCGCTACGGAGATGTGCAT
CGCGCAGGCGCTCATGCGGCAGTCGCAGGAGGTGGAGGGCGTGCAGCAAT
GGCCTTACCAGGCGGTGGCGGCGGCGCTCGAGGTCATCCCGCGCACGCTG
GCGCAAAATTGCGGGGCCAACGTCGTCCGTGCCTTGACGCAGCTGCGGGC
AAAACACTCGAACACGCCGAACTCCACGTGGGGCATCGACGGCACGACGG
GGCAGCTGGCGGACATGACGACGCTCGGCATCTGGGAGCCGTACGCGGTC
AAGCTTCAGACCTTTAAGACCGCCATCGAGGCGGCGTGCATGATCCTGCG
GATCGACGACATTGTCTCGGGGACGCGCGCGAAGAAGCAGTAG
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