mRNA_P-wetherbeei_contig18203.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig18203.1.1
Unique NamemRNA_P-wetherbeei_contig18203.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig18203.1.1 vs. uniprot
Match: A0A1Q3KKV9_9PROT (Succinyl-diaminopimelate desuccinylase n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KKV9_9PROT)

HSP 1 Score: 693 bits (1788), Expect = 2.190e-250
Identity = 346/395 (87.59%), Postives = 368/395 (93.16%), Query Frame = 1
Query:    1 MPDALNTNATDVIELTRALVRCESVTPREAGALDLLEGTLAPLGFRCERMDFTQIGTDDVANLYARVGTAGRHFCFAGHSDVVPVGDLSSWTIGPFSAELSNGYLFGRGAADMKGAIAAFTDAATRFLAKRGPDFGGSISMLITGDEEGPAVNGTVKMLKRLADRGETIDACVVGEPTSSRRFGDMIKIGRRGSMNVDMVVRGVQGHVAYPERLDNAIHRLSSLIEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPGAATARFNTRFNDLWTSKTLLAHLTERLERANAALGGNGLFELKHEVSGESFYTPPGPLSDLVAGAIRDVTGVETELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSAVADLRTLASVYETVLDRYFAA 1185
            MPD L +N TDV++LTRALVRCESVTP+EAGAL LL+ TL PLGF CERMDF+Q GTDDVANLYAR+G+ GRHFCFAGHSDVVPVGDLSSWTIGPF+AELS+GYLFGRGAADMKGAIAAFTDAA RFL++RG DFGGSIS+LITGDEEGPAVNGTVKMLKRLA+RGETIDACVVGEPTSSRRFGDM+KIGRRGSM VD+ VRGVQGHVAYPERLDNAIHRLS++IEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPG A ARFNTRFNDLWTSKTLLAHL ER+ER +A LGGNG  E    VSGESFYTPPGPLSDLVAGAIRDV GVE ELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSA+ADL+TLA VYETVLDRYFAA
Sbjct:    1 MPDTLASNITDVVDLTRALVRCESVTPKEAGALQLLQRTLEPLGFHCERMDFSQAGTDDVANLYARIGSGGRHFCFAGHSDVVPVGDLSSWTIGPFAAELSDGYLFGRGAADMKGAIAAFTDAAQRFLSRRGRDFGGSISLLITGDEEGPAVNGTVKMLKRLAERGETIDACVVGEPTSSRRFGDMMKIGRRGSMTVDLTVRGVQGHVAYPERLDNAIHRLSAIIEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPGVARARFNTRFNDLWTSKTLLAHLKERIERVHAVLGGNGTIEYDVSVSGESFYTPPGPLSDLVAGAIRDVAGVEAELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSAIADLKTLARVYETVLDRYFAA 395          
BLAST of mRNA_P-wetherbeei_contig18203.1.1 vs. uniprot
Match: A0A259MUL2_9PROT (Succinyl-diaminopimelate desuccinylase n=7 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MUL2_9PROT)

HSP 1 Score: 690 bits (1780), Expect = 3.630e-249
Identity = 342/394 (86.80%), Postives = 369/394 (93.65%), Query Frame = 1
Query:    1 MPDALNTNATDVIELTRALVRCESVTPREAGALDLLEGTLAPLGFRCERMDFTQIGTDDVANLYARVGTAGRHFCFAGHSDVVPVGDLSSWTIGPFSAELSNGYLFGRGAADMKGAIAAFTDAATRFLAKRGPDFGGSISMLITGDEEGPAVNGTVKMLKRLADRGETIDACVVGEPTSSRRFGDMIKIGRRGSMNVDMVVRGVQGHVAYPERLDNAIHRLSSLIEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPGAATARFNTRFNDLWTSKTLLAHLTERLERANAALGGNGLFELKHEVSGESFYTPPGPLSDLVAGAIRDVTGVETELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSAVADLRTLASVYETVLDRYFA 1182
            MPD+L+TN TDVI+LTR LVRCESVTPREAGAL LLE TLAPLGF CERMDFT+ GTDDVANLYAR+G+ G+HFCFAGHSDVVPVGDLSSWTIGPF+AELS GYLFGRGAADMKGAIAAFTDAA RFL++RG DFGGSIS+LITGDEEGPAVNGTVKML+RLADRGETIDAC+VGEPTSS+RFGDM+KIGRRGSM VD+VVRGVQGHVAYPERLDNA+HRLS++IEALVREPID+GSTHF PTSLQFTTVDVGN ATNIAPG A ARFNTRFNDLWTSKTLLAHL ER+ERA+ ALGGNG  +   +VSGESFYTPPGPLSDLVAGA+RDV G+ETELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSAVADL+ LA VYETVLDRYFA
Sbjct:    1 MPDSLSTNVTDVIDLTRTLVRCESVTPREAGALQLLEQTLAPLGFACERMDFTEAGTDDVANLYARIGSGGKHFCFAGHSDVVPVGDLSSWTIGPFAAELSGGYLFGRGAADMKGAIAAFTDAAARFLSRRGRDFGGSISLLITGDEEGPAVNGTVKMLQRLADRGETIDACIVGEPTSSKRFGDMMKIGRRGSMTVDLVVRGVQGHVAYPERLDNAVHRLSAIIEALVREPIDKGSTHFGPTSLQFTTVDVGNPATNIAPGVAKARFNTRFNDLWTSKTLLAHLKERIERASEALGGNGTVDYSVQVSGESFYTPPGPLSDLVAGAVRDVAGIETELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSAVADLKMLARVYETVLDRYFA 394          
BLAST of mRNA_P-wetherbeei_contig18203.1.1 vs. uniprot
Match: A0A1F3AC69_9PROT (Succinyl-diaminopimelate desuccinylase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3AC69_9PROT)

HSP 1 Score: 680 bits (1754), Expect = 3.850e-245
Identity = 342/399 (85.71%), Postives = 367/399 (91.98%), Query Frame = 1
Query:    1 MPDALNTNATDVIELTRALVRCESVTPREAGALDLLEGTLAPLGFRCERMDFTQIGTDDVANLYARVGTA----GRHFCFAGHSDVVPVGDLSSWTIGPFSAELSNGYLFGRGAADMKGAIAAFTDAATRFLAKRGPDFGGSISMLITGDEEGPAVNGTVKMLKRLADRGETIDACVVGEPTSSRRFGDMIKIGRRGSMNVDMVVRGVQGHVAYPERLDNAIHRLSSLIEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPGAATARFNTRFNDLWTSKTLLAHLTERLERANAALGGNGLFELKHEVSGESFYTPPGPLSDLVAGAIRDVTGVETELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSAVADLRTLASVYETVLDRYFAA 1185
            MPDAL  + TDVIELTRALVRCESVTPREAGAL+LLE TLAPLGFRCERM+F+Q GTDDVANLYAR+G      GRHFCFAGHSDVVPVGDLSSWTI PFSAELS+GY+FGRGAADMKGAIAAFT+A +RF+AKRG DFGG+IS+LITGDEEGPAVNGTVKMLKRLADRGE IDACVVGEPTSSRRFGDM+KIGRRGSM VDM +RGVQGHVAYPERLDN +HRLS++IEALVREP+D GS HFQPTSLQFTT+DVGNKATNIAPG   ARFNTRFNDLWTSK LLAHL ER++R NA LGGNG+ E K EVSGESFYTPPGPLSDLVAGAIRDVTGVE ELSTTGGTSDARFIR+YCPVLEFGLVGESMHKVDEKSAVADLR LA+VYETVLDR+FAA
Sbjct:    1 MPDALAPHVTDVIELTRALVRCESVTPREAGALELLERTLAPLGFRCERMNFSQAGTDDVANLYARIGQPKEANGRHFCFAGHSDVVPVGDLSSWTISPFSAELSDGYIFGRGAADMKGAIAAFTEAVSRFVAKRGRDFGGAISLLITGDEEGPAVNGTVKMLKRLADRGEKIDACVVGEPTSSRRFGDMMKIGRRGSMTVDMTIRGVQGHVAYPERLDNPLHRLSAIIEALVREPVDGGSKHFQPTSLQFTTIDVGNKATNIAPGTVHARFNTRFNDLWTSKALLAHLQERIDRVNARLGGNGIVEYKVEVSGESFYTPPGPLSDLVAGAIRDVTGVEAELSTTGGTSDARFIRAYCPVLEFGLVGESMHKVDEKSAVADLRMLANVYETVLDRFFAA 399          
BLAST of mRNA_P-wetherbeei_contig18203.1.1 vs. uniprot
Match: A0A1T4NMZ0_9HYPH (Succinyl-diaminopimelate desuccinylase n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4NMZ0_9HYPH)

HSP 1 Score: 672 bits (1733), Expect = 5.440e-242
Identity = 330/396 (83.33%), Postives = 367/396 (92.68%), Query Frame = 1
Query:    1 MPDALNTNATDVIELTRALVRCESVTPREAGALDLLEGTLAPLGFRCERMDFTQIGTDDVANLYARVGTAGRHFCFAGHSDVVPVGDLSSWTIGPFSAELSNGYLFGRGAADMKGAIAAFTDAATRFLAKRGPDFGGSISMLITGDEEGPAVNGTVKMLKRLADRGETIDACVVGEPTSSRRFGDMIKIGRRGSMNVDMVVRGVQGHVAYPERLDNAIHRLSSLIEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPGAATARFNTRFNDLWTSKTLLAHLTERLERANAALGGNGLFELKH-EVSGESFYTPPGPLSDLVAGAIRDVTGVETELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSAVADLRTLASVYETVLDRYFAA 1185
            MPD +  + TDV+ELTRALVRCESVTPREAGAL LLE TL PLGFRCERMDFTQ GTDDVANLYAR+GT G+HFCFAGHSDVVPVGDLSSWTIGPFSAELS GY+FGRGAADMKGAIAAFT+AA RF A+RG DFGGSIS+LITGDEEGPAVNGTVKMLKRLA+RGETIDAC+VGEPTSS+RFGDM+KIGRRGSM VD+VVRG+QGHV YPERLDN IHRLS+++EALVREPID+GSTHFQPTSLQFTT+DVGNKATNIAPG  TARFNTRFNDLWTSKTLLAHL ER+E+A+AA+GGNG+ E ++ EVSGESFYTPPG L DLVAGA+RDV G++ ELSTTGGTSDARFI +YCPVLEFGLVGE+MHKVDEKSA++DL+TL+ VYETVLDRYF +
Sbjct:    1 MPDTVVPSVTDVVELTRALVRCESVTPREAGALQLLERTLTPLGFRCERMDFTQTGTDDVANLYARIGTGGKHFCFAGHSDVVPVGDLSSWTIGPFSAELSAGYVFGRGAADMKGAIAAFTEAAARFTARRGRDFGGSISLLITGDEEGPAVNGTVKMLKRLAERGETIDACIVGEPTSSKRFGDMMKIGRRGSMTVDLVVRGIQGHVGYPERLDNPIHRLSAIVEALVREPIDKGSTHFQPTSLQFTTIDVGNKATNIAPGTVTARFNTRFNDLWTSKTLLAHLKERIEQASAAVGGNGVVEYRNVEVSGESFYTPPGALVDLVAGAVRDVAGIDPELSTTGGTSDARFISAYCPVLEFGLVGETMHKVDEKSAISDLKTLSRVYETVLDRYFGS 396          
BLAST of mRNA_P-wetherbeei_contig18203.1.1 vs. uniprot
Match: A0A512NLP0_9HYPH (Succinyl-diaminopimelate desuccinylase n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A512NLP0_9HYPH)

HSP 1 Score: 671 bits (1730), Expect = 1.560e-241
Identity = 336/396 (84.85%), Postives = 360/396 (90.91%), Query Frame = 1
Query:    1 MPDALNTNATDVIELTRALVRCESVTPREAGALDLLEGTLAPLGFRCERMDFTQIGTDDVANLYARVGTAGRHFCFAGHSDVVPVGDLSSWTIGPFSAELSNGYLFGRGAADMKGAIAAFTDAATRFLAKRGPDFGGSISMLITGDEEGPAVNGTVKMLKRLADRGETIDACVVGEPTSSRRFGDMIKIGRRGSMNVDMVVRGVQGHVAYPERLDNAIHRLSSLIEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPGAATARFNTRFNDLWTSKTLLAHLTERLERANAALGGNGLFELKH-EVSGESFYTPPGPLSDLVAGAIRDVTGVETELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSAVADLRTLASVYETVLDRYFAA 1185
            MPD L+   TDV+ELTR LVRCESVTPREAGAL  LE TLAPLGF CERMDFTQ GTDDVANLYAR+GT GRHFCFAGHSDVVPVGDLSSWTIGPF+AELS GYLFGRGAADMKGAIAAF DAA RFLAKRG DFGGSIS+LITGDEEGPAVNGTVKMLK+LA+RGETIDACVVGEPTSS+RFGDM+KIGRRGSM VD+V+RG+QGHV YPERLDN IHRLS+LIEALVREPIDQGSTHFQPTSLQFTT+DVGNKATNIAPG   ARFNTRFNDLWTSKTLLAHL ER++RA+AALGGNG  E    EVSGESFYT PGPL +L+AGAIRDV G+E ELSTTGGTSDARFI  YCPVLEFGLVGE+MHKVDEKSA+ DL+TL+ VYETVLDRYFAA
Sbjct:    1 MPDTLSPAVTDVVELTRTLVRCESVTPREAGALQHLERTLAPLGFTCERMDFTQAGTDDVANLYARIGTGGRHFCFAGHSDVVPVGDLSSWTIGPFAAELSAGYLFGRGAADMKGAIAAFIDAAARFLAKRGRDFGGSISLLITGDEEGPAVNGTVKMLKKLAERGETIDACVVGEPTSSKRFGDMMKIGRRGSMTVDLVIRGIQGHVGYPERLDNPIHRLSALIEALVREPIDQGSTHFQPTSLQFTTIDVGNKATNIAPGVVKARFNTRFNDLWTSKTLLAHLKERMDRASAALGGNGTIEFASVEVSGESFYTAPGPLVELMAGAIRDVAGIEPELSTTGGTSDARFISRYCPVLEFGLVGETMHKVDEKSAIEDLKTLSRVYETVLDRYFAA 396          
BLAST of mRNA_P-wetherbeei_contig18203.1.1 vs. uniprot
Match: A0A537NB19_9PROT (Succinyl-diaminopimelate desuccinylase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NB19_9PROT)

HSP 1 Score: 638 bits (1646), Expect = 8.960e-229
Identity = 327/395 (82.78%), Postives = 351/395 (88.86%), Query Frame = 1
Query:    1 MPDALNTNATDVIELTRALVRCESVTPREAGALDLLEGTLAPLGFRCERMDFTQIGTDDVANLYARVGTAGRHFCFAGHSDVVPVGDLSSWTIGPFSAELSNGYLFGRGAADMKGAIAAFTDAATRFLAKRGPDFGGSISMLITGDEEGPAVNGTVKMLKRLADRGETIDACVVGEPTSSRRFGDMIKIGRRGSMNVDMVVRGVQGHVAYPERLDNAIHRLSSLIEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPGAATARFNTRFNDLWTSKTLLAHLTERLERANAALGGNGLFEL-KHEVSGESFYTPPGPLSDLVAGAIRDVTGVETELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSAVADLRTLASVYETVLDRYFA 1182
            MPD L     DV+ELTR+LVRCESVTP EAGAL LLE TL  LGFRCERMDF+Q GTDDVANLYAR+G+ G+HFCFAGHSDVVPVGDLSSWTIGPFSAELS GYLFGRGAADMKGAIAAFT AA RFLA+RG D  GSIS+LITGDEEGPAVNGTVKMLK LA+RGETIDACVVGEPTSSRRFGDM+KIGRRGSM VD+VVRGVQGHV YPERLDN IHRL+++I+AL REPID GSTHFQPTSLQFTTVDVGNKATNIAPG   ARFNTRFNDLWTS+ LLA L +R+ERA+ A+GGNG  E  K EVSGESFYTPPGPL  LVAGA+R+VTGVE ELSTTGGTSDARFI  YCPVLEFGLVGE+MHKVDEKSAVADL+ LA VYETVLDRYFA
Sbjct:    1 MPDTLAPAVVDVVELTRSLVRCESVTPVEAGALTLLERTLGGLGFRCERMDFSQAGTDDVANLYARIGSGGKHFCFAGHSDVVPVGDLSSWTIGPFSAELSAGYLFGRGAADMKGAIAAFTAAAARFLARRGRDLDGSISLLITGDEEGPAVNGTVKMLKALAERGETIDACVVGEPTSSRRFGDMMKIGRRGSMTVDIVVRGVQGHVGYPERLDNPIHRLAAIIQAL-REPIDNGSTHFQPTSLQFTTVDVGNKATNIAPGTVRARFNTRFNDLWTSQKLLADLKQRIERASVAVGGNGTIEYEKVEVSGESFYTPPGPLVALVAGAVREVTGVECELSTTGGTSDARFISRYCPVLEFGLVGETMHKVDEKSAVADLKALARVYETVLDRYFA 394          
BLAST of mRNA_P-wetherbeei_contig18203.1.1 vs. uniprot
Match: A0A5C8P887_9HYPH (Succinyl-diaminopimelate desuccinylase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A5C8P887_9HYPH)

HSP 1 Score: 615 bits (1585), Expect = 1.740e-219
Identity = 301/393 (76.59%), Postives = 346/393 (88.04%), Query Frame = 1
Query:    1 MPDALNTNATDVIELTRALVRCESVTPREAGALDLLEGTLAPLGFRCERMDFTQIGTDDVANLYARVGTAGRHFCFAGHSDVVPVGDLSSWTIGPFSAELSNGYLFGRGAADMKGAIAAFTDAATRFLAKRGPDFGGSISMLITGDEEGPAVNGTVKMLKRLADRGETIDACVVGEPTSSRRFGDMIKIGRRGSMNVDMVVRGVQGHVAYPERLDNAIHRLSSLIEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPGAATARFNTRFNDLWTSKTLLAHLTERLERANAALGGNGLFELKHEVSGESFYTPPGPLSDLVAGAIRDVTGVETELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSAVADLRTLASVYETVLDRYF 1179
            MPDAL   A DV+ELTRALVRC SVTP E GAL LLE  L+PLGFRCERMDF++ GT DVANLYARVG  G+HFCFAGHSDVVP GDLSSWTIGPF+AELS+GY+FGRGAADMKGAIAAF  AA  FL +RG DFGGSIS+LITGDEEGPAVNGTVKML+RLA+RGE +D CVVGEPTSS+RFGDM+KIGRRGS+NV++ VRG+QGHVAYP+R+DN IHRL+ LIEAL+  P+DQGSTHFQP+SLQ TTVDVGN ATN+ PG A ARFN RFNDLWTS+TLLAHL ERL++AN  +GGNGL+E+  +VSGESFYTPPG LSDL+AG++R+VTG++ ELSTTGGTSDARFIR+ CPV+EFGLVGE+MHKVDEKSAVADL+ LA VY  +L+R F
Sbjct:    1 MPDALANTALDVVELTRALVRCPSVTPVEGGALALLEDRLSPLGFRCERMDFSEPGTPDVANLYARVGAGGKHFCFAGHSDVVPAGDLSSWTIGPFAAELSDGYVFGRGAADMKGAIAAFACAAAAFLRQRGTDFGGSISLLITGDEEGPAVNGTVKMLRRLAERGEAVDLCVVGEPTSSKRFGDMMKIGRRGSVNVELTVRGIQGHVAYPDRVDNPIHRLARLIEALIGVPLDQGSTHFQPSSLQVTTVDVGNPATNVVPGVARARFNVRFNDLWTSQTLLAHLRERLDQANGRVGGNGLYEIDAQVSGESFYTPPGELSDLIAGSVREVTGIDPELSTTGGTSDARFIRAACPVVEFGLVGETMHKVDEKSAVADLQALAQVYTLMLERCF 393          
BLAST of mRNA_P-wetherbeei_contig18203.1.1 vs. uniprot
Match: A0A521KXK7_9HYPH (Succinyl-diaminopimelate desuccinylase (Fragment) n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521KXK7_9HYPH)

HSP 1 Score: 544 bits (1402), Expect = 1.380e-192
Identity = 279/334 (83.53%), Postives = 297/334 (88.92%), Query Frame = 1
Query:    1 MPDALNTNATDVIELTRALVRCESVTPREAGALDLLEGTLAPLGFRCERMDFTQIGTDDVANLYARVGTA----GRHFCFAGHSDVVPVGDLSSWTIGPFSAELSNGYLFGRGAADMKGAIAAFTDAATRFLAKRGPDFGGSISMLITGDEEGPAVNGTVKMLKRLADRGETIDACVVGEPTSSRRFGDMIKIGRRGSMNVDMVVRGVQGHVAYPERLDNAIHRLSSLIEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPGAATARFNTRFNDLWTSKTLLAHLTERLERANAALGGNGLFEL-KHEVSGESFYTPPGPLSDLVAGAIR 987
            MPD   + ATDVIELTR+LVRCESVTPREAGAL LLE TLAP+GFRCERMDFTQ GTDDVANLYAR+G      GRH CFAGHSDVVPVGDLSSWTIGPFSAELS GYLFGRGAADMKGAIAAFT+AA RF+A+RG  FGGSIS+LITGDEEGPAVNGTVKMLK+LADRGE IDAC+VGEPTSS++FGDM+KIGRRGSM VD  VRGVQGHV YPERLDNAIHRL+++IEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAP  A ARFNTRFNDLWTSK LL HL  R+ERANA+LGGNG  E  K EVSGESFYT PGPL DLVAGAIR
Sbjct:    1 MPDTHASAATDVIELTRSLVRCESVTPREAGALQLLERTLAPIGFRCERMDFTQAGTDDVANLYARIGEDKNGNGRHLCFAGHSDVVPVGDLSSWTIGPFSAELSAGYLFGRGAADMKGAIAAFTEAAARFVARRGTTFGGSISLLITGDEEGPAVNGTVKMLKKLADRGEKIDACIVGEPTSSKKFGDMMKIGRRGSMTVDFTVRGVQGHVGYPERLDNAIHRLTAIIEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPAVAHARFNTRFNDLWTSKKLLEHLKARMERANASLGGNGTIEYNKVEVSGESFYTQPGPLVDLVAGAIR 334          
BLAST of mRNA_P-wetherbeei_contig18203.1.1 vs. uniprot
Match: A0A6N7F708_9PROT (Succinyl-diaminopimelate desuccinylase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F708_9PROT)

HSP 1 Score: 457 bits (1177), Expect = 1.580e-157
Identity = 227/385 (58.96%), Postives = 290/385 (75.32%), Query Frame = 1
Query:   31 DVIELTRALVRCESVTPREAGALDLLEGTLAPLGFRCERMDFTQIGTDDVANLYARVGTAGRHFCFAGHSDVVPVGDLSSWTIGPFSAELSNGYLFGRGAADMKGAIAAFTDAATRFLAKRGPDFGGSISMLITGDEEGPAVNGTVKMLKRLADRGETIDACVVGEPTSSRRFGDMIKIGRRGSMNVDMVVRGVQGHVAYPERLDNAIHRLSSLIEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPGAATARFNTRFNDLWTSKTLLAHLTERLERANAALGGNGLFELKHEVSGESFYTPPGPLSDLVAGAIRDVTGVETELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSAVADLRTLASVYETVLDRYFAA 1185
            D + L RAL+RC SVTP +AGALD L+  L  LGF C RM F++ GT D+ NLYAR+GT G + CFAGH+DVVPVGD   WT+ PF+AE+ +G L+GRGA+DMKGAIAAF  AA RF+A+ G    GSIS+LITGDEEGP+VNGT K+L  LA++GE +DAC+VGEPT+  R G+MIKIGRRGS++  + + GVQGH AYP   DN +HRL + +  +   P+D G+ HFQP++LQ T+VDVGN ATNI PGAA A FN RFND  TS +L+  LTERL+    A+GG   +E+  +V+GE+F TPPGPLS  +A A+   TG+  ELSTTGGTSDARFI+ +CPV EFGL+ ++MHKVDE++AV+D+  LA +YE VLD +FAA
Sbjct:    6 DAVALARALIRCPSVTPADAGALDTLQEALGGLGFACHRMTFSETGTPDIDNLYARIGTNGPNLCFAGHTDVVPVGDAQGWTVDPFAAEVIDGVLYGRGASDMKGAIAAFVTAAGRFIARHGAALPGSISLLITGDEEGPSVNGTKKVLGWLAEKGERLDACLVGEPTNPGRLGEMIKIGRRGSLSGFVTMHGVQGHTAYPHLADNPLHRLVAALHDIASAPLDDGTGHFQPSNLQLTSVDVGNTATNIIPGAARATFNLRFNDRHTSASLMRWLTERLD----AVGGE--YEIDWQVTGEAFLTPPGPLSAAIAAAVTKATGLTPELSTTGGTSDARFIKDFCPVAEFGLISQTMHKVDERAAVSDIEALADIYEAVLDGWFAA 384          
BLAST of mRNA_P-wetherbeei_contig18203.1.1 vs. uniprot
Match: A0A255XK85_9PROT (Succinyl-diaminopimelate desuccinylase n=2 Tax=Elstera cyanobacteriorum TaxID=2022747 RepID=A0A255XK85_9PROT)

HSP 1 Score: 453 bits (1166), Expect = 1.050e-155
Identity = 233/386 (60.36%), Postives = 284/386 (73.58%), Query Frame = 1
Query:   25 ATDVIELTRALVRCESVTPREAGALDLLEGTLAPLGFRCERMDFTQIGTDDVANLYARVGTAGRHFCFAGHSDVVPVGDLSSWTIGPFSAELSNGYLFGRGAADMKGAIAAFTDAATRFLAKRGPDFGGSISMLITGDEEGPAVNGTVKMLKRLADRGETIDACVVGEPTSSRRFGDMIKIGRRGSMNVDMVVRGVQGHVAYPERLDNAIHRLSSLIEALVREPIDQGSTHFQPTSLQFTTVDVGNKATNIAPGAATARFNTRFNDLWTSKTLLAHLTERLERANAALGGNGLFELKHEVSGESFYTPPGPLSDLVAGAIRDVTGVETELSTTGGTSDARFIRSYCPVLEFGLVGESMHKVDEKSAVADLRTLASVYETVLDRYFA 1182
            A D I LT+AL+RC SVTP +AGAL +L  TL  LGF C  + F + GT  + NLYAR G    HFCFAGH+DVVP GDLS W++ PF+A++    LFGRGAADMKG IAAF  A + FLA+  P FGGSIS+LITGDEEGPA+NGT KML+ LA RGETIDACVVGEPT+ R  G+M+KIGRRGS++  + V+GVQGHVAYP   DN I ++  L+ AL    +D G+THFQP++L+ TTVD GN  +N+ PG+ TA FN RFND ++  TL A + +RL+ A         +ELK  +SGESF+TPPGPLS LVAGA+  V GV  ELSTTGGTSDARFIR+YCPV+EFGLVG+SMHKVDE   +ADL  L  +Y  +LDRYFA
Sbjct:   21 ALDPIALTQALIRCPSVTPADAGALGVLAETLTALGFVCHPLRFEEAGTAPIDNLYARFGAGSPHFCFAGHTDVVPPGDLSGWSVDPFAADIKGERLFGRGAADMKGGIAAFVAAVSAFLAEN-PAFGGSISLLITGDEEGPAINGTKKMLEWLAARGETIDACVVGEPTNPRSLGEMMKIGRRGSLSGTITVQGVQGHVAYPHLADNPIPKMVKLLTALGSGALDDGTTHFQPSNLEVTTVDTGNPTSNLIPGSVTASFNVRFNDSFSGATLEALVRQRLDSAGVP------YELKISISGESFFTPPGPLSALVAGAVETVLGVTPELSTTGGTSDARFIRAYCPVVEFGLVGQSMHKVDENLRLADLAALTQIYRVMLDRYFA 399          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18203.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Q3KKV9_9PROT2.190e-25087.59Succinyl-diaminopimelate desuccinylase n=1 Tax=Alp... [more]
A0A259MUL2_9PROT3.630e-24986.80Succinyl-diaminopimelate desuccinylase n=7 Tax=Alp... [more]
A0A1F3AC69_9PROT3.850e-24585.71Succinyl-diaminopimelate desuccinylase n=2 Tax=Alp... [more]
A0A1T4NMZ0_9HYPH5.440e-24283.33Succinyl-diaminopimelate desuccinylase n=1 Tax=Enh... [more]
A0A512NLP0_9HYPH1.560e-24184.85Succinyl-diaminopimelate desuccinylase n=4 Tax=Alp... [more]
A0A537NB19_9PROT8.960e-22982.78Succinyl-diaminopimelate desuccinylase n=1 Tax=Alp... [more]
A0A5C8P887_9HYPH1.740e-21976.59Succinyl-diaminopimelate desuccinylase n=2 Tax=Hyp... [more]
A0A521KXK7_9HYPH1.380e-19283.53Succinyl-diaminopimelate desuccinylase (Fragment) ... [more]
A0A6N7F708_9PROT1.580e-15758.96Succinyl-diaminopimelate desuccinylase n=1 Tax=Alp... [more]
A0A255XK85_9PROT1.050e-15560.36Succinyl-diaminopimelate desuccinylase n=2 Tax=Els... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18203contigP-wetherbeei_contig18203:90..1277 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000038_gene1416
Preferred namedapE
PFAMsM20_dimer,Peptidase_M20
Model size1188
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00064,RC00090
KEGG koko:K01439
KEGG ReactionR02734
KEGG Pathwayko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230
KEGG ModuleM00016
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.46e-250
EggNOG OGsCOG0624@1|root,COG0624@2|Bacteria,1MW6G@1224|Proteobacteria,2TT0J@28211|Alphaproteobacteria,2JQ29@204441|Rhodospirillales
EC3.5.1.18
DescriptionCatalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Cds size1188
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186139.2262108-CDS-P-wetherbeei_contig18203:89..12771683186139.2262108-CDS-P-wetherbeei_contig18203:89..1277Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig18203 90..1277 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18203.1.1prot_P-wetherbeei_contig18203.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig18203 90..1277 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig18203.1.1

>prot_P-wetherbeei_contig18203.1.1 ID=prot_P-wetherbeei_contig18203.1.1|Name=mRNA_P-wetherbeei_contig18203.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=396bp
MPDALNTNATDVIELTRALVRCESVTPREAGALDLLEGTLAPLGFRCERM
DFTQIGTDDVANLYARVGTAGRHFCFAGHSDVVPVGDLSSWTIGPFSAEL
SNGYLFGRGAADMKGAIAAFTDAATRFLAKRGPDFGGSISMLITGDEEGP
AVNGTVKMLKRLADRGETIDACVVGEPTSSRRFGDMIKIGRRGSMNVDMV
VRGVQGHVAYPERLDNAIHRLSSLIEALVREPIDQGSTHFQPTSLQFTTV
DVGNKATNIAPGAATARFNTRFNDLWTSKTLLAHLTERLERANAALGGNG
LFELKHEVSGESFYTPPGPLSDLVAGAIRDVTGVETELSTTGGTSDARFI
RSYCPVLEFGLVGESMHKVDEKSAVADLRTLASVYETVLDRYFAA*
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mRNA from alignment at P-wetherbeei_contig18203:90..1277-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig18203.1.1 ID=mRNA_P-wetherbeei_contig18203.1.1|Name=mRNA_P-wetherbeei_contig18203.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1188bp|location=Sequence derived from alignment at P-wetherbeei_contig18203:90..1277- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCGATGCCCTGAATACCAACGCTACCGACGTGATCGAACTGACGCG CGCACTGGTGCGCTGCGAGAGCGTGACGCCGCGCGAAGCCGGCGCCCTGG ACCTGCTCGAAGGCACGCTGGCGCCGCTCGGCTTCCGCTGTGAGCGCATG GATTTCACCCAGATCGGCACCGACGACGTGGCGAATCTTTATGCCCGCGT TGGAACCGCTGGCCGCCATTTCTGTTTCGCCGGCCATTCCGACGTGGTGC CGGTGGGCGATCTTTCCTCGTGGACCATCGGGCCTTTCTCGGCCGAGCTG TCCAATGGCTACCTGTTCGGCCGCGGCGCCGCCGACATGAAGGGCGCGAT CGCGGCCTTCACCGACGCCGCGACGCGCTTCCTGGCCAAGCGTGGACCCG ACTTCGGCGGCTCGATCAGCATGCTGATCACCGGCGACGAGGAGGGGCCT GCCGTCAACGGCACCGTGAAGATGTTGAAGCGTCTCGCCGATCGCGGCGA GACGATCGACGCCTGCGTGGTCGGCGAGCCGACCAGTTCCAGGCGTTTCG GCGACATGATCAAGATCGGCCGGCGCGGCAGCATGAACGTCGACATGGTG GTGCGCGGCGTGCAGGGCCACGTTGCCTATCCCGAGCGGCTCGACAATGC CATCCACCGGCTGTCGTCGCTGATCGAGGCGCTGGTGCGCGAGCCGATCG ACCAGGGCAGCACGCATTTCCAGCCGACGTCGCTGCAGTTCACCACCGTC GATGTCGGCAACAAGGCGACCAACATCGCGCCCGGCGCCGCCACCGCGCG CTTCAACACCCGCTTCAACGATCTCTGGACCTCCAAGACGCTGCTCGCCC ATCTCACCGAGCGGCTGGAGCGCGCCAACGCGGCGCTGGGCGGCAACGGA CTGTTCGAGCTGAAGCACGAGGTCTCGGGCGAGTCGTTCTATACGCCGCC CGGACCGCTCAGCGACCTGGTGGCCGGTGCCATCCGCGACGTCACGGGAG TCGAGACAGAACTCTCGACGACCGGGGGCACCTCGGATGCGCGCTTCATC CGCAGTTACTGTCCAGTGCTCGAATTCGGGCTGGTCGGCGAGAGCATGCA CAAGGTCGATGAGAAGAGCGCCGTCGCCGACCTCAGGACGCTCGCCAGCG TCTATGAGACGGTGCTCGACCGTTACTTCGCGGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig18203:90..1277-

>mRNA_P-wetherbeei_contig18203.1.1 ID=mRNA_P-wetherbeei_contig18203.1.1|Name=mRNA_P-wetherbeei_contig18203.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1188bp|location=Sequence derived from alignment at P-wetherbeei_contig18203:90..1277- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCGATGCCCTGAATACCAACGCTACCGACGTGATCGAACTGACGCG
CGCACTGGTGCGCTGCGAGAGCGTGACGCCGCGCGAAGCCGGCGCCCTGG
ACCTGCTCGAAGGCACGCTGGCGCCGCTCGGCTTCCGCTGTGAGCGCATG
GATTTCACCCAGATCGGCACCGACGACGTGGCGAATCTTTATGCCCGCGT
TGGAACCGCTGGCCGCCATTTCTGTTTCGCCGGCCATTCCGACGTGGTGC
CGGTGGGCGATCTTTCCTCGTGGACCATCGGGCCTTTCTCGGCCGAGCTG
TCCAATGGCTACCTGTTCGGCCGCGGCGCCGCCGACATGAAGGGCGCGAT
CGCGGCCTTCACCGACGCCGCGACGCGCTTCCTGGCCAAGCGTGGACCCG
ACTTCGGCGGCTCGATCAGCATGCTGATCACCGGCGACGAGGAGGGGCCT
GCCGTCAACGGCACCGTGAAGATGTTGAAGCGTCTCGCCGATCGCGGCGA
GACGATCGACGCCTGCGTGGTCGGCGAGCCGACCAGTTCCAGGCGTTTCG
GCGACATGATCAAGATCGGCCGGCGCGGCAGCATGAACGTCGACATGGTG
GTGCGCGGCGTGCAGGGCCACGTTGCCTATCCCGAGCGGCTCGACAATGC
CATCCACCGGCTGTCGTCGCTGATCGAGGCGCTGGTGCGCGAGCCGATCG
ACCAGGGCAGCACGCATTTCCAGCCGACGTCGCTGCAGTTCACCACCGTC
GATGTCGGCAACAAGGCGACCAACATCGCGCCCGGCGCCGCCACCGCGCG
CTTCAACACCCGCTTCAACGATCTCTGGACCTCCAAGACGCTGCTCGCCC
ATCTCACCGAGCGGCTGGAGCGCGCCAACGCGGCGCTGGGCGGCAACGGA
CTGTTCGAGCTGAAGCACGAGGTCTCGGGCGAGTCGTTCTATACGCCGCC
CGGACCGCTCAGCGACCTGGTGGCCGGTGCCATCCGCGACGTCACGGGAG
TCGAGACAGAACTCTCGACGACCGGGGGCACCTCGGATGCGCGCTTCATC
CGCAGTTACTGTCCAGTGCTCGAATTCGGGCTGGTCGGCGAGAGCATGCA
CAAGGTCGATGAGAAGAGCGCCGTCGCCGACCTCAGGACGCTCGCCAGCG
TCTATGAGACGGTGCTCGACCGTTACTTCGCGGCCTGA
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