mRNA_P-wetherbeei_contig1814.3.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1814.3.3 vs. uniprot
Match: D8LAU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU0_ECTSI) HSP 1 Score: 195 bits (495), Expect = 7.660e-55 Identity = 114/312 (36.54%), Postives = 153/312 (49.04%), Query Frame = 3
Query: 261 IKHIRVVGERHSGTTFITKLLEKMFVADPDIDVSARLCNWKHWFQTRIHEAVIIGNRRCNEIMPCAECVHPEQTLVIIVWRNPYDWVTSMFGQPHHAISHYGIA-FHEFLRKSWTLDPAANNASAAIAAASSAAERERINAPRISTERRCIDNFISDQEVIPCLPSERRAIYELNESGEPFPNIYSLRLAKIADFAAIAKWAPHYEVIHYDETLLRGGATAVTRWLDKIADRVGAERSGARSRKILTTKTLSLLSSMSKSSIYLNGGCSKDRDRRRAAPTAPCLFQCDPRSLEALHTMWDEEAEASIGYHKM 1193
I++I VV ERHSG+ + T L + F D D+ V+ LC WKHWFQ RIH+ V G R C C C+ E TLV+++WRNPYDW++ M PHHA +H G+ +F+ W + P E CIDNF+ + EV+PC ++R +IYEL+ G + NIY LR AKI DF A+ W P YE + Y++ L+ G R L+ VG +L T L +M Y N AP ++EALH MWDEE E+ IGYHK+
Sbjct: 42 IRYISVVAERHSGSRWFTGFLREYF-RDKDVMVTPTLCTWKHWFQDRIHQDVQDGKRPCRGNQQCPACLDTEHTLVVVMWRNPYDWISGMHSNPHHAKAHRGVQDLEQFMTMPWIMGP----------------------------ELPCIDNFLPN-EVLPCKENDRSSIYELDRDGRAYGNIYELRKAKILDFNAVETWVPFYEKVVYEDMLVGPGLRDWLRSLETKYGLVGNYMDVP--DNVLQTNMARLWRNM----YYTNS--------EHCAPNCTMGGVTGATAVEALHQMWDEELESGIGYHKV 309
BLAST of mRNA_P-wetherbeei_contig1814.3.3 vs. uniprot
Match: A0A6H5LNE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNE9_9PHAE) HSP 1 Score: 196 bits (498), Expect = 1.500e-54 Identity = 116/313 (37.06%), Postives = 161/313 (51.44%), Query Frame = 3
Query: 261 IKHIRVVGERHSGTTFITKLLEKMFVADPDIDVSARLCNWKHWFQTRIHEAVIIGNRRCNEIMPCAECVHPEQTLVIIVWRNPYDWVTSMFGQPHHAISHYGIA-FHEFLRKSWTLDPAANNASAAIAAASSAAERERINAPRISTERRCIDNFISDQEVIPCLPSERRAIYELNESGEPFPNIYSLRLAKIADFAAIAKWAPHYEVIHYDETLLRGGATAVTRWLDKIADRVGAERSGARSRKILTTKTLSLLSSMSKSSIYLNGGCSKDRDRRRAAPTAPCLFQCDPRSLEALHTMWDEEAEASIGYHKMK 1196
IK+I ++GERHSGTT++ K L+ F D DI V+A LC WKHWFQ RI++ + G R C E C C TLV+ +WRNPYDWV+ M P HA +H I +F+ W + A A +E + R E CIDNF+ EV+PC P + AIYEL+ GE + NIY LR AKI DF A+ WAP+YE I Y++ L + G + WL + G G + + + + S K Y+N + AP +LE ++ +WDEE E +GYH+++
Sbjct: 100 IKYISLIGERHSGTTWMVKFLQDYF-RDKDITVTATLCTWKHWFQDRIYQDIQDGKRLCREGQQCPACKDINHTLVVAMWRNPYDWVSGMHKIPWHAQAHASIPDMSKFMTMPWIMG----------AEEEKQARKEALI--RTKDELPCIDNFLP-WEVLPCRPGDESAIYELDPGGEAYGNIYELRKAKIRDFDAVKMWAPYYEKILYEDMLAKDG---LKMWLMSLDTLYGL---GGNYKSVPDSALAVKMESSRKQMYYMNS--------QHCAPHCKMGGVAGRSALETMNRLWDEELEEDLGYHQVR 384
BLAST of mRNA_P-wetherbeei_contig1814.3.3 vs. uniprot
Match: D8LAT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT9_ECTSI) HSP 1 Score: 192 bits (489), Expect = 6.350e-54 Identity = 115/312 (36.86%), Postives = 153/312 (49.04%), Query Frame = 3
Query: 261 IKHIRVVGERHSGTTFITKLLEKMFVADPDIDVSARLCNWKHWFQTRIHEAVIIGNRRCNEIMPCAECVHPEQTLVIIVWRNPYDWVTSMFGQPHHAISHYGIA-FHEFLRKSWTLDPAANNASAAIAAASSAAERERINAPRISTERRCIDNFISDQEVIPCLPSERRAIYELNESGEPFPNIYSLRLAKIADFAAIAKWAPHYEVIHYDETLLRGGATAVTRWLDKIADRVGAERSGARSRKILTTKTLSLLSSMSKSSIYLNGGCSKDRDRRRAAPTAPCLFQCDPRSLEALHTMWDEEAEASIGYHKM 1193
I++I VV ERHSG T++T L + F D D+ V+ LC WKHWFQ RIH+ V G R C C C+ E TLV+++WRNPYDW+ M PHHA +H G+ +F+ W + P E CIDNF+ + EV+PC + R +IYEL+ G + NIY LR AKI DF A+ W P YE + Y++ L+ G R L+ VG +L T L S+M Y N AP ++EALH MWDEE E+ IGY+K+
Sbjct: 45 IRYISVVSERHSGFTWMTSFLWEYF-RDKDVMVTPTLCTWKHWFQDRIHQDVQDGKRPCRGNQQCPACLDTEHTLVVVMWRNPYDWIGGMHSNPHHAKAHRGVQDLEQFMTMPWIMGP----------------------------ELPCIDNFLPN-EVLPCKENGRSSIYELDRDGRAYGNIYELRKAKILDFNAVETWVPFYEKVVYEDMLVGPGLRDWLRSLETKYGLVGNYMDVP--DNVLQTNMARLWSNM----YYTNS--------EHCAPNCTMGGVTGATAVEALHQMWDEELESGIGYNKV 312
BLAST of mRNA_P-wetherbeei_contig1814.3.3 vs. uniprot
Match: A0A7S3UU09_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU09_HETAK) HSP 1 Score: 145 bits (367), Expect = 7.270e-36 Identity = 105/325 (32.31%), Postives = 161/325 (49.54%), Query Frame = 3
Query: 261 IKHIRVVGERHSGTTFITKLLEKMFVADPDIDVSARLCNWKHWFQTRIHEAVIIGNRRCNEIMPCAECVHPEQTLVIIVWRNPYDWVTSMFGQPHHAISH--YG----IAFHEFLRKSWTLDPAANNASAAIAAASSAAERERINAPRISTERRCIDNFISDQEVIPCLPSERRAIYELNESGEPFPN----IYS----LRLAKIADFAAIAKWAPHYEVIHYDETLLRGGATAVTRWLDKIADRVGAERSGARSRK-ILTTKTLSLLSSMSKSSIYLNGGCSKDRDRRRAAPTAPCLFQCDPRSLEALHTMWDEEAEASIGYHK 1190
I+ I ++ ERHSG+T++ K+L++ F P + V +C +KHWFQ R E I G R C++ C C++PE T++ +WRNPYDW+ ++ P H+ISH Y I F F+ K W + A ++ + AP C+DNF + C S+ AIYE +G+P N Y+ +R AKI DF ++ KWAP++ + Y E LL GG + + D +A R + R+ +L T LLS+ Y +GG + A C +P +L+A+ + D +AE +GYHK
Sbjct: 64 IRRIALIAERHSGSTWLFKVLQEAF---PGVQVQQSVCMYKHWFQDRHREETISGKRGCSKGY-CFPCLNPESTIIFNLWRNPYDWIVALNEIPWHSISHGYYSKKGHIDFIAFVNKEWKVHGPARQYMLKKQG------KKALQAP-------CLDNFQKNDLDFVC--SKASAIYETT-AGDPHYNGTQSYYAGPLEMRAAKIRDFMSVGKWAPNFYTVTY-EALLFGGYDGLRDYFDAVAQRHNLTHHPEKYRELVLPTSRNKLLSTF-----YGSGG-----KKCNQKILAKCPLIANPAALQAVQSKIDHQAERLLGYHK 357
BLAST of mRNA_P-wetherbeei_contig1814.3.3 vs. uniprot
Match: D7FTA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA1_ECTSI) HSP 1 Score: 122 bits (306), Expect = 2.390e-28 Identity = 75/234 (32.05%), Postives = 103/234 (44.02%), Query Frame = 3
Query: 261 IKHIRVVGERHSGTTFITKLLEKMFVADPDIDVSARLCNWKHWFQTRIHEAVIIGNRRCNEIMPCAECVHPEQTLVIIVWRNPYDWVTSMFGQPHHAISHYGIA-FHEFLRKSWTLDPAANNASAAIAAASSAAERERINAPRISTERRCIDNFISDQEVIPCLPSERRAIYELNESGEPFPNIYSLRLAKIADFAAIAKWAPHYEVIHYDETLLRGGATAVTRWLDKIADRVG 959
IK+I ++ ERHSG+T++T L + F D+ V+ LC WKHWFQ RIH+ + G R C E C C+ E TLV+ +WRNPYDW++ M PHHA +H G+ E++ W + P + ER D I +E AKI DF A+ W P YE I DE +L G + WL + + G
Sbjct: 26 IKYISLIAERHSGSTWMTGFLSRYF-RHSDVKVTPTLCTWKHWFQDRIHQDIQDGKRPCREHQQCPACLDTEHTLVVAMWRNPYDWISGMQSNPHHAKAHRGVQDLSEYMTMPWIMQPK-------------------------NEERARKDALIKAKEE-----------------------------AKILDFNAVETWVPFYEKIA-DEDMLDG--ETLGDWLRSLETKYG 201
BLAST of mRNA_P-wetherbeei_contig1814.3.3 vs. uniprot
Match: D8LB15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB15_ECTSI) HSP 1 Score: 114 bits (285), Expect = 4.800e-26 Identity = 53/116 (45.69%), Postives = 71/116 (61.21%), Query Frame = 3
Query: 261 IKHIRVVGERHSGTTFITKLLEKMFVADPDIDVSARLCNWKHWFQTRIHEAVIIGNRRCNEIMPCAECVHPEQTLVIIVWRNPYDWVTSMFGQPHHAISHYGIA-FHEFLRKSWTL 605
IK+I ++GERHSGTT++ K L+ F D DI V+A LC WKHWFQ RI++ + G R C E C C TLV+ +WRNPYDW++ M P HA +H I +F+ W +
Sbjct: 10 IKYISLIGERHSGTTWMVKFLQDYF-RDKDITVTATLCTWKHWFQDRIYQDIHDGKRPCREGQQCPACKDINHTLVVAMWRNPYDWISGMHKIPWHAQAHASIPDMSKFMTMPWIM 124
BLAST of mRNA_P-wetherbeei_contig1814.3.3 vs. uniprot
Match: A0A7S2K8J0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8J0_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.670e-19 Identity = 73/241 (30.29%), Postives = 110/241 (45.64%), Query Frame = 3
Query: 270 IRVVGERHSGTTFITKLLEKMFVADPDIDVSARLCNWKHWFQTRIHEAVIIGNRRCNEIMPCAECVHPEQTLVIIVWRNPYDWVTSMFGQPHHAISHYGIAFHEFLRKSWTLDPAANNASAAIAAASSAAERERINAPRISTERRCIDNFISDQEVIPCLPSERRAI-------------------YELNE--SGEPFPNIYSLRLAKIADFAAIAKW--APHYEVIHYDETLLRGGATAV 923
I ++GERHSGTT++T L+K F P +D+ +L WKHWFQ + + + + T+VI +RN YDW +M PHH+ H + + EF+ K WT+ A + +++ I RC +NF D E++ C+ R + YEL SG P+ NI +R KI +F A++KW H+ I Y ETL+ G A+
Sbjct: 127 ISLIGERHSGTTWMTNELQKCF---PTLDIKPKLVRWKHWFQDK----------------RIVDAKNQKPTMVIAQFRNIYDWTEAMRQGPHHSPYHLRLGWEEFVTKPWTMPRPARDLDIK--------DKKTI---------RCQENFGYD-EIVSCVRGRRVSFPNQKVREQSLTNYSGHNPQYELRNDGSGLPYSNIIEMRSDKIRNFLAVSKWNWVKHFLAIKY-ETLVTEGTGAL 329
BLAST of mRNA_P-wetherbeei_contig1814.3.3 vs. uniprot
Match: A0A7S0G6T5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G6T5_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.730e-19 Identity = 75/238 (31.51%), Postives = 115/238 (48.32%), Query Frame = 3
Query: 261 IKHIRVVGERHSGTTFITKLLEKMFVADPDIDVSARLCNWKHWFQTRIHEAVIIGNRRCNEIMPCAECVHPEQTLVIIVWRNPYDWVTSMFGQPHHAISHYGIAFHEFLRKSWTLDPAANNASAAIAAASSAAERERINAPRISTERRCIDNFISDQEVIPCLPSER------RAIYELNE--SGEPFPNIYSLRLAKIADFAAIAKWA--PHYEVIHYDETLLRGGATAVTRWLDKI 944
+ I ++GER++GT ++T LL K F P I SARL WKHWFQ + NE ++TLVI ++RNPY+WV +M PHH+ SH + + F+ K WT+ ++ + ++S + I E+ + IS Q P L S + IYE+ SG+PF NI +R AKI + + +W V+ Y++ LL G + L+K+
Sbjct: 56 VMEISLLGERNTGTNWVTALLSKCF---PGIKTSARLVRWKHWFQD--------DDSNENE---------RQKTLVIAMFRNPYEWVMAMRKTPHHSPSHLRLKWQNFVTKPWTMTRPESD----LVFSNSTGQ--------ICHEKFAYKDVISCQRQPPELMSSTGGYSSGKPIYEMRHDGSGKPFANILEMRAAKIHNHLGVQEWPWISGVHVVRYED-LLEDGTGNFIKNLEKL 260
BLAST of mRNA_P-wetherbeei_contig1814.3.3 vs. uniprot
Match: A0A7S2E1N5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E1N5_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 4.570e-17 Identity = 75/262 (28.63%), Postives = 115/262 (43.89%), Query Frame = 3
Query: 249 DIRAIKHIRVVGERHSGTTFITKLLEKMFVADPDIDVSARLCNWKHWFQTRIHEAVIIGNRRCNEIMPCAECVHPEQTLVIIVWRNPYDWVTSMFGQPHHAISHYGIAFHEFLRKSWTLDPAANNASAAIAAASSAAERERINAPRISTERR---CIDNFISDQEVIPCLP---------------SERRAIYELNE--SGEPFPNIYSLRLAKIADFAAIA--KWAPHYEVIHYDETLLRGGATAVTRWLDKIADRVGAER 968
D+ A+ + ++GER SGTT+I + L + F + + RL +KHWFQ + ++ +P +LVI ++RNPYDW T+M PHHA +H + + EFL K+WT ER+ T++ C D F EV+ C+ SE + +YE+ SGEP+ NI +R KI +F + K + V Y++ L G +L KI G +R
Sbjct: 53 DVTAVS-VAILGERSSGTTWIYEHLTECFAHG--VPIRRRLEKYKHWFQV---------DEERDDYKGLDFETYPTNSLVISMFRNPYDWTTAMHRVPHHAPAHIDLPWKEFLTKAWTT--------------------ERVGKDLNITDKENFLCQDKF-KYHEVVSCIHKPMGDEYWKDKKTRFSEHQPVYEMKNDGSGEPYDNILDMRADKIRNFLTVKDFKRITDFWVYKYEDLLADG----TEEFLQKIEKATGVKR 277
BLAST of mRNA_P-wetherbeei_contig1814.3.3 vs. uniprot
Match: A0A7S1VY01_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VY01_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.530e-16 Identity = 75/255 (29.41%), Postives = 114/255 (44.71%), Query Frame = 3
Query: 270 IRVVGERHSGTTFITKLLEKMFVADPDIDVSARLCNWKHWFQTRIHEAVIIGNRRCNEIMPCAECVHPEQTLVIIVWRNPYDWVTSMFGQPHHAISHYGIAFHEFLRKSWTLDPAANNASAAIAAASSAAERERINAPRISTERR---CIDNFISDQEVIPCLP---------------SERRAIYELNE--SGEPFPNIYSLRLAKIADFAAIA--KWAPHYEVIHYDETLLRGGATAVTRWLDKIADRVGAER 968
+ ++GER SGTT+I + L + F + + + RL +KHWFQ + +P +LVI ++RNPYDW+ +M PHH+ SH +++ EFL K+WT ER+ T+ + C +NF EV+ C+ SE + +YEL SGEP+ NI LR AK +F + K + V Y E+LL+ G R +I + G +R
Sbjct: 191 VAILGERSSGTTWIYEHLTECF--NHSVPIKRRLNRYKHWFQE--------------------DSNYPSNSLVIAIFRNPYDWMEAMHRVPHHSPSHMDLSWKEFLTKTWTT--------------------ERVGHDLNITDTKSVVCQENF-QYHEVVSCIHKPMGQEYWEGKKTRFSEHQPVYELKHDGSGEPYDNIMELRAAKNVNFMEVKDFKRITDFWVYKY-ESLLKEGTEDFLR---RIEEATGVKR 398 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1814.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1814.3.3 >prot_P-wetherbeei_contig1814.3.3 ID=prot_P-wetherbeei_contig1814.3.3|Name=mRNA_P-wetherbeei_contig1814.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=416bp MSPLWSEARQSWNCRRLVGVVNLLLLLALLWLYLAQRWPYPQEKKQKQSKback to top mRNA from alignment at P-wetherbeei_contig1814:2026..4060+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1814.3.3 ID=mRNA_P-wetherbeei_contig1814.3.3|Name=mRNA_P-wetherbeei_contig1814.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2035bp|location=Sequence derived from alignment at P-wetherbeei_contig1814:2026..4060+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1814:2026..4060+ >mRNA_P-wetherbeei_contig1814.3.3 ID=mRNA_P-wetherbeei_contig1814.3.3|Name=mRNA_P-wetherbeei_contig1814.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1248bp|location=Sequence derived from alignment at P-wetherbeei_contig1814:2026..4060+ (Phaeothamnion wetherbeei SAG_119_79)back to top |