mRNA_P-wetherbeei_contig18079.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18079.1.1 vs. uniprot
Match: A0A140GW13_9HYPH (ABC transporter substrate-binding protein n=2 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GW13_9HYPH) HSP 1 Score: 364 bits (934), Expect = 1.060e-124 Identity = 181/206 (87.86%), Postives = 195/206 (94.66%), Query Frame = 1
Query: 76 LVRVNTFPTARSLPFFVGVEKGIFAKHGIKLEFEFTESSKAQREGLAGGKFEVVHSAVDNALAMVETAHVDVVIVSGGDGGTNEFIVGKDINKFEDIRGKALVTDAPNTAYAVQAKKILLRHGLKDGVDYRINAVGAGPFRLKAMLEGGDNAAAIMNLPFSAQTIEAGLKSLGRTIDLLGPYQAGGAFVLRSWAKANPEVLERYIA 693
++R+NTFPTARSLPFFVGVEKG FAK GIKLEFEFTESSKAQREGLA GKFEVVHSAVDNALAM+E A VDVVIVSGGDGGTNEFIVGK + + DIRGKALVTDAPNTAYA+QAKKILL+HGLKDGVDYR+NAVGAGPFRLKAMLEGGDNAAAIMNLPFSAQ IEAG+ SLGRT+DLLGPYQAGGAFVLRSWAKA+P+VLERY+A
Sbjct: 1 MIRLNTFPTARSLPFFVGVEKGFFAKQGIKLEFEFTESSKAQREGLANGKFEVVHSAVDNALAMIEVAKVDVVIVSGGDGGTNEFIVGKGLKSYADIRGKALVTDAPNTAYALQAKKILLKHGLKDGVDYRLNAVGAGPFRLKAMLEGGDNAAAIMNLPFSAQAIEAGMTSLGRTVDLLGPYQAGGAFVLRSWAKAHPDVLERYLA 206
BLAST of mRNA_P-wetherbeei_contig18079.1.1 vs. uniprot
Match: A0A7C3JP66_9PROT (ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3JP66_9PROT) HSP 1 Score: 272 bits (695), Expect = 8.910e-88 Identity = 138/221 (62.44%), Postives = 168/221 (76.02%), Query Frame = 1
Query: 34 ALALVAGSATAQE-TLVRVNTFPTARSLPFFVGVEKGIFAKHGIKLEFEFTESSKAQREGLAGGKFEVVHSAVDNALAMVETAHVDVVIVSGGDGGTNEFIVGKDINKFEDIRGKALVTDAPNTAYAVQAKKILLRHGLKDGVDYRINAVGAGPFRLKAMLEGGDNAAAIMNLPFSAQTIEAGLKSLGRTIDLLGPYQAGGAFVLRSWAKANPEVLERYIA 693
AL L AG A A E T++RVN FPTA++LPFF+G+ KGIF KHG+++E +FT S QREGLA G FE+ H+AVDNA+AMV+ A DVVIV+GGD G NEFIV + DIRG+ L+ DAPNTAYA+ AKK+L + GLKDGVDY + VG G R KAMLE + AAA+MNLPFS Q ++ G KS+G +D+LGPYQA GAFVLR+WAKAN VLERYIA
Sbjct: 25 ALGLAAGPAAAAEPTMLRVNVFPTAKNLPFFIGLPKGIFEKHGLRIELQFTPGSAKQREGLAAGAFEIAHAAVDNAVAMVDVAGQDVVIVTGGDSGMNEFIVQPYVKTLADIRGRTLLVDAPNTAYALLAKKLLAKRGLKDGVDYTVKPVGRGGLRYKAMLENEEYAAAVMNLPFSIQAVQQGKKSMGGLVDMLGPYQANGAFVLRTWAKANRAVLERYIA 245
BLAST of mRNA_P-wetherbeei_contig18079.1.1 vs. uniprot
Match: A0A537C3H6_9PROT (ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537C3H6_9PROT) HSP 1 Score: 268 bits (685), Expect = 1.880e-86 Identity = 134/220 (60.91%), Postives = 169/220 (76.82%), Query Frame = 1
Query: 37 LALVAGS-ATAQETLVRVNTFPTARSLPFFVGVEKGIFAKHGIKLEFEFTESSKAQREGLAGGKFEVVHSAVDNALAMVETAHVDVVIVSGGDGGTNEFIVGKDINKFEDIRGKALVTDAPNTAYAVQAKKILLRHGLKDGVDYRINAVGAGPFRLKAMLEGGDNAAAIMNLPFSAQTIEAGLKSLGRTIDLLGPYQAGGAFVLRSWAKANPEVLERYIA 693
LA+VA + ATA +VRVN+FP A++LP G+ KGIFA+HG+ L+ FTE+S QREGLA +F++VHSAVDNA+AMVETA DV+IV+GGD G NEF V + F D+RG+ LV DAPNTAYA+QAKKIL +HGL++G DY + VG G RLKAM E GD AAAI+NLPF+ Q + G+KSLG T+D+LGPYQA GAF LR+W ++N +LERYIA
Sbjct: 9 LAMVASAPATADPAMVRVNSFPNAKALPLHAGIAKGIFARHGLALQLSFTENSTRQREGLAASEFDLVHSAVDNAVAMVETAKNDVLIVTGGDSGMNEFFVQAYVRSFADLRGRKLVVDAPNTAYAIQAKKILQKHGLREGADYTVVPVGRGELRLKAMAENGDYAAAILNLPFTIQAEQLGMKSLGNTVDILGPYQANGAFALRAWVESNGALLERYIA 228
BLAST of mRNA_P-wetherbeei_contig18079.1.1 vs. uniprot
Match: A0A537B0V3_9PROT (ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537B0V3_9PROT) HSP 1 Score: 268 bits (684), Expect = 2.660e-86 Identity = 131/210 (62.38%), Postives = 162/210 (77.14%), Query Frame = 1
Query: 64 AQETLVRVNTFPTARSLPFFVGVEKGIFAKHGIKLEFEFTESSKAQREGLAGGKFEVVHSAVDNALAMVETAHVDVVIVSGGDGGTNEFIVGKDINKFEDIRGKALVTDAPNTAYAVQAKKILLRHGLKDGVDYRINAVGAGPFRLKAMLEGGDNAAAIMNLPFSAQTIEAGLKSLGRTIDLLGPYQAGGAFVLRSWAKANPEVLERYIA 693
A+ VRV++FP A++LP GVE+GIFA+HG+ L FTE+S QREGLA G+F++VH+AVDNA+AMVETA DV+IV+GGD G NEF V D+ F D+RG+ LV DAPNTAYA+QAKKILL+HGLKDG DY + VG G RLKAM E D AAAI+NLPF+ Q + G+KSLG T+D+LGPYQA GAF LR W ++N +LERYIA
Sbjct: 26 AELATVRVSSFPNAKALPLHAGVERGIFARHGLALRLSFTENSTRQREGLAAGEFDLVHAAVDNAVAMVETAKKDVLIVTGGDSGMNEFFVQADVRSFADLRGRKLVVDAPNTAYAIQAKKILLKHGLKDGRDYTVVPVGRGELRLKAMAENSDYAAAILNLPFTIQAEQLGMKSLGNTVDILGPYQANGAFALRDWVESNGPLLERYIA 235
BLAST of mRNA_P-wetherbeei_contig18079.1.1 vs. uniprot
Match: A0A536YIY9_9PROT (ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YIY9_9PROT) HSP 1 Score: 264 bits (674), Expect = 6.750e-85 Identity = 133/220 (60.45%), Postives = 167/220 (75.91%), Query Frame = 1
Query: 37 LALVAGSATAQE-TLVRVNTFPTARSLPFFVGVEKGIFAKHGIKLEFEFTESSKAQREGLAGGKFEVVHSAVDNALAMVETAHVDVVIVSGGDGGTNEFIVGKDINKFEDIRGKALVTDAPNTAYAVQAKKILLRHGLKDGVDYRINAVGAGPFRLKAMLEGGDNAAAIMNLPFSAQTIEAGLKSLGRTIDLLGPYQAGGAFVLRSWAKANPEVLERYIA 693
LA+VA +A A + VRVN+FP A++LP GV KGIFA+ G+ L+ FTE+S QREGLA G+F++VHSAVDNA+AMVE A DV+IV+GGD G NEF V + F D+RG+ LV DAPNTAYA+QAKKILL+HGLKDG DY + VG G RLKAM E D AAA++NLPF+ Q + G+KSLG T+D+LGPYQA GAF LR+W ++N +LERY+A
Sbjct: 9 LAMVASAAAAADPATVRVNSFPNAKALPLHAGVAKGIFARRGVGLQLSFTENSTRQREGLAAGEFDLVHSAVDNAVAMVEGAKKDVLIVTGGDSGMNEFFVQAYVRSFADLRGRKLVVDAPNTAYAIQAKKILLKHGLKDGTDYTVVPVGRGELRLKAMAENRDYAAAVLNLPFTIQAEQLGMKSLGNTVDILGPYQANGAFALRAWVESNGPLLERYLA 228
BLAST of mRNA_P-wetherbeei_contig18079.1.1 vs. uniprot
Match: A0A536XU29_9PROT (ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XU29_9PROT) HSP 1 Score: 249 bits (637), Expect = 3.860e-79 Identity = 128/221 (57.92%), Postives = 159/221 (71.95%), Query Frame = 1
Query: 31 AALALVAGSATAQETLVRVNTFPTARSLPFFVGVEKGIFAKHGIKLEFEFTESSKAQREGLAGGKFEVVHSAVDNALAMVETAHVDVVIVSGGDGGTNEFIVGKDINKFEDIRGKALVTDAPNTAYAVQAKKILLRHGLKDGVDYRINAVGAGPFRLKAMLEGGDNAAAIMNLPFSAQTIEAGLKSLGRTIDLLGPYQAGGAFVLRSWAKANPEVLERYIA 693
AAL++ + Q T++RVNTFPTA P VG+ G+F K G+K+E +FT +S QREGLA G FE+VH+AVDNA+AMVE AH DVVIV+GGD G NEF+V +I DIRGK LV DAPNTAY + A+KIL GL DG DY + +G P R++AM + +NAAA++N PFS + GLKS GR +DLLGPYQAGGAFV+R WA AN +LERYIA
Sbjct: 17 AALSVPTAAIAQQPTVLRVNTFPTASYSPILVGIANGVFEKRGMKVELQFTPNSDVQREGLAKGAFEIVHAAVDNAVAMVEMAHEDVVIVTGGDTGMNEFMVRPEIKSIADIRGKNLVVDAPNTAYGLLARKILKNAGLVDGRDYTLKPIGGTPLRIEAMEKSPENAAAMLNPPFSFSAKDKGLKSFGRAVDLLGPYQAGGAFVMRKWASANGPLLERYIA 237
BLAST of mRNA_P-wetherbeei_contig18079.1.1 vs. uniprot
Match: A0A7C2YT63_9PROT (ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YT63_9PROT) HSP 1 Score: 249 bits (635), Expect = 4.450e-78 Identity = 125/219 (57.08%), Postives = 159/219 (72.60%), Query Frame = 1
Query: 34 ALALVAGSATAQETLVRVNTFPTARSLPFFVGVEKGIFAKHGIKLEFEFTESSKAQREGLAGGKFEVVHSAVDNALAMVETAHVDVVIVSGGDGGTNEFIVGKDINKFEDIRGKALVTDAPNTAYAVQAKKILLRHGLKDGVDYRINAVGAGPFRLKAMLEGGDNAAAIMNLPFSAQTIEAGLKSLGRTIDLLGPYQAGGAFVLRSWAKANPEVLERYI 690
ALA+ + A+ T +RVN FPTA++LPFFVG+ +G+F KHG+K+E +FT+SS QR GLA G FE+ HSAVDNA+AMVE A DVVIV GGD G NEFIV + DIRGK L+ DAP+TAYA+ AKK+L HGL++G DY + VG R +A+ E D AA+++N PFS Q + G KS+G +DLLGPYQA GAFV+R WA+AN +LERYI
Sbjct: 77 ALAVSQPAPAAELTALRVNVFPTAKNLPFFVGLPRGVFEKHGLKIELQFTQSSSKQRAGLAEGAFEIAHSAVDNAVAMVEVAGKDVVIVMGGDSGMNEFIVQPYVRSLSDIRGKTLLVDAPDTAYALLAKKLLGSHGLREGGDYTVKPVGRSGLRYQALFENEDYAASVLNPPFSVQAVARGKKSMGGLVDLLGPYQANGAFVMRDWARANGPLLERYI 295
BLAST of mRNA_P-wetherbeei_contig18079.1.1 vs. uniprot
Match: A0A1F4DFY3_9PROT (NMT1 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DFY3_9PROT) HSP 1 Score: 244 bits (623), Expect = 2.420e-77 Identity = 120/207 (57.97%), Postives = 148/207 (71.50%), Query Frame = 1
Query: 73 TLVRVNTFPTARSLPFFVGVEKGIFAKHGIKLEFEFTESSKAQREGLAGGKFEVVHSAVDNALAMVETAHVDVVIVSGGDGGTNEFIVGKDINKFEDIRGKALVTDAPNTAYAVQAKKILLRHGLKDGVDYRINAVGAGPFRLKAMLEGGDNAAAIMNLPFSAQTIEAGLKSLGRTIDLLGPYQAGGAFVLRSWAKANPEVLERYIA 693
T +RV FP A++LP + G++KG+F G+K+ +FT +S REGLA G F++ H AVDNA+AM E A DVVIV GGD NEF V +I D++G+ L+ DAPNTAYA+QAKKILL HGLK DY + VGA P R KAMLE DNAA I+N PFS Q GLKSLGR +DL+GPYQA GAFV+R+WAK+N E LERY+A
Sbjct: 3 TTLRVKVFPGAQNLPLYAGLDKGLFMGRGLKVNLQFTSNSTELREGLAAGAFDIAHGAVDNAVAMAEMAGQDVVIVMGGDSSMNEFFVQPEIRSVSDLKGRTLIVDAPNTAYALQAKKILLNHGLKPDQDYTVKPVGATPLRAKAMLENKDNAATILNPPFSIQAAAQGLKSLGRVVDLIGPYQATGAFVMRAWAKSNAEALERYLA 209
BLAST of mRNA_P-wetherbeei_contig18079.1.1 vs. uniprot
Match: A0A537D5U2_9PROT (ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537D5U2_9PROT) HSP 1 Score: 231 bits (588), Expect = 6.970e-72 Identity = 118/212 (55.66%), Postives = 149/212 (70.28%), Query Frame = 1
Query: 58 ATAQETLVRVNTFPTARSLPFFVGVEKGIFAKHGIKLEFEFTESSKAQREGLAGGKFEVVHSAVDNALAMVETAHVDVVIVSGGDGGTNEFIVGKDINKFEDIRGKALVTDAPNTAYAVQAKKILLRHGLKDGVDYRINAVGAGPFRLKAMLEGGDNAAAIMNLPFSAQTIEAGLKSLGRTIDLLGPYQAGGAFVLRSWAKANPEVLERYIA 693
A AQ +RV FP A++LP +GIF +HG+K+E FT +S+ QR+GLA G F++ +AVDNA+AMVE A DVVIV+GGD NEF V DI + D++G L+ DAPNTAYA+Q KKILL +GLK+G DY+I+ +G RLK M E D AA++N PFS GL+S+GR IDL+GPYQA G FVLRSWAKAN + LERYIA
Sbjct: 16 AQAQPIPLRVKMFPGAQALPVMAAASQGIFERHGLKVEVLFTVNSQEQRDGLAAGDFQIAQAAVDNAVAMVELARHDVVIVTGGDSSMNEFFVQPDIASYADLKGHTLLVDAPNTAYALQLKKILLMNGLKEGADYKIHPLGGTFLRLKGMRENKDYKAAMLNPPFSVDAKATGLRSMGRAIDLIGPYQASGTFVLRSWAKANADTLERYIA 227
BLAST of mRNA_P-wetherbeei_contig18079.1.1 vs. uniprot
Match: A0A537C0J5_9PROT (ABC transporter substrate-binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537C0J5_9PROT) HSP 1 Score: 229 bits (585), Expect = 3.470e-71 Identity = 115/208 (55.29%), Postives = 149/208 (71.63%), Query Frame = 1
Query: 70 ETLVRVNTFPTARSLPFFVGVEKGIFAKHGIKLEFEFTESSKAQREGLAGGKFEVVHSAVDNALAMVETAHVDVVIVSGGDGGTNEFIVGKDINKFEDIRGKALVTDAPNTAYAVQAKKILLRHGLKDGVDYRINAVGAGPFRLKAMLEGGDNAAAIMNLPFSAQTIEAGLKSLGRTIDLLGPYQAGGAFVLRSWAKANPEVLERYIA 693
+T +RV FP A++LP +GIF +HG+K++ FT SS+ QR+GLA G F++ +AVDNA+AMVE A DVVIV+GGD NEF V DI + D++G L+ DAPNTAYA+Q KKILL +GLK+G DY++++VG RLK M E D A++++ PFS AGLKS+GR +DL+GPYQA G FVLRSWAKAN LERYIA
Sbjct: 39 QTPLRVKIFPGAQALPVMAAASQGIFDRHGLKVDVLFTMSSQEQRDGLASGDFQIAQAAVDNAVAMVELARHDVVIVTGGDSSMNEFFVQPDIGSYADLKGHTLLVDAPNTAYALQLKKILLMNGLKEGADYQVHSVGGTFLRLKGMRENKDYKASMLSPPFSMDARAAGLKSMGRAVDLIGPYQASGTFVLRSWAKANAGTLERYIA 246 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18079.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18079.1.1 >prot_P-wetherbeei_contig18079.1.1 ID=prot_P-wetherbeei_contig18079.1.1|Name=mRNA_P-wetherbeei_contig18079.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=231bp MNSPSLATAAAALALVAGSATAQETLVRVNTFPTARSLPFFVGVEKGIFAback to top mRNA from alignment at P-wetherbeei_contig18079:5..697- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18079.1.1 ID=mRNA_P-wetherbeei_contig18079.1.1|Name=mRNA_P-wetherbeei_contig18079.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=693bp|location=Sequence derived from alignment at P-wetherbeei_contig18079:5..697- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18079:5..697- >mRNA_P-wetherbeei_contig18079.1.1 ID=mRNA_P-wetherbeei_contig18079.1.1|Name=mRNA_P-wetherbeei_contig18079.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=693bp|location=Sequence derived from alignment at P-wetherbeei_contig18079:5..697- (Phaeothamnion wetherbeei SAG_119_79)back to top |