mRNA_P-wetherbeei_contig180.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig180.1.1
Unique NamemRNA_P-wetherbeei_contig180.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig180.1.1 vs. uniprot
Match: A0A836C6J7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6J7_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.490e-40
Identity = 63/106 (59.43%), Postives = 84/106 (79.25%), Query Frame = 1
Query:    1 YLGTLRASKIVCTANPSFWEGDHRTGEALASGAMVMVDHMWSPRPYPLIDNWHVVYFDPANKVDFMEKLHYFHTHPEEARVIAARGAFHVQRYMNAVTTMDYVLTT 318
            Y   L  +K++ T NPSFWEGDHRTGEAL++GAMV+VD MW+PR +PLI  WH+V +D +++ DFM+K+HY++TH +EAR IAARG +H QRY+N VT +DY L T
Sbjct:  224 YFEVLWDTKLLVTCNPSFWEGDHRTGEALSAGAMVVVDLMWAPRQFPLISGWHIVMYDASDEQDFMDKVHYYYTHQDEARKIAARGLYHAQRYLNTVTFVDYALIT 329          
BLAST of mRNA_P-wetherbeei_contig180.1.1 vs. uniprot
Match: A0A835YZ66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ66_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.890e-38
Identity = 65/122 (53.28%), Postives = 82/122 (67.21%), Query Frame = 1
Query:    1 YLGTLRASKIVCTANPSFWEGDHRTGEALASGAMVMVD----------------HMWSPRPYPLIDNWHVVYFDPANKVDFMEKLHYFHTHPEEARVIAARGAFHVQRYMNAVTTMDYVLTT 318
            Y   L  +KI+ T NPSFWEGDHRTGEALA+GAMV+VD                 MW+PR +PLI  WH + +D +++ DFM+KLHY+HTH +EAR +AARG +H QRY N  T +DYVL T
Sbjct:  216 YFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMVLVDIIXXXXXXXXXXXXXXXMWAPRQFPLISGWHAILYDASDEEDFMDKLHYYHTHDDEARKVAARGLYHAQRYFNTATFVDYVLIT 337          
BLAST of mRNA_P-wetherbeei_contig180.1.1 vs. uniprot
Match: A0A836CF83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF83_9STRA)

HSP 1 Score: 140 bits (354), Expect = 5.250e-38
Identity = 62/106 (58.49%), Postives = 78/106 (73.58%), Query Frame = 1
Query:    1 YLGTLRASKIVCTANPSFWEGDHRTGEALASGAMVMVDHMWSPRPYPLIDNWHVVYFDPANKVDFMEKLHYFHTHPEEARVIAARGAFHVQRYMNAVTTMDYVLTT 318
            Y   L  +KI+ T NPSFWEGDHRTGEALA+GAM +VD MW PR +PLI  WH V +D +++ DFM KL Y+ TH +EAR +AARG +H QRY N VT +DY++ T
Sbjct:  261 YFEVLWETKILVTCNPSFWEGDHRTGEALAAGAMTLVDIMWGPRQFPLISGWHAVLYDTSDERDFMNKLDYYRTHDDEARKVAARGLYHAQRYFNTVTWVDYMVIT 366          
BLAST of mRNA_P-wetherbeei_contig180.1.1 vs. uniprot
Match: A0A8J2SP70_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SP70_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.840e-27
Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 1
Query:    1 YLGTLRASKIVCTANPSFWEGDHRTGEALASGAMVMVDHMWSPRPYPLIDNWHVVYFDPANKVDFMEKLHYFHTHPEEARVIAARGAFHVQRYMNAVTTMDYVL 312
            Y  ++R +KIV T NPS WEGD RT EALASGA+V VD M++P P P +D  HVV +D ++   F +KL Y+ +HP+EA+ +AA G  H  RY  AV+ +D+VL
Sbjct:  407 YFNSMRRAKIVVTCNPSHWEGDFRTFEALASGALVFVDEMYTPHPRPFVDGEHVVVYDNSDPDAFFQKLDYYLSHPQEAQKLAAAGLRHALRYHRAVSRLDFVL 510          
BLAST of mRNA_P-wetherbeei_contig180.1.1 vs. uniprot
Match: F0Y0E2_AURAN (Thioesterase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0E2_AURAN)

HSP 1 Score: 112 bits (281), Expect = 8.750e-27
Identity = 55/104 (52.88%), Postives = 69/104 (66.35%), Query Frame = 1
Query:    1 YLGTLRASKIVCTANPSFWEGDHRTGEALASGAMVMVDHMWSPRPYPLIDNWHVVYFDPANKVDFMEKLHYFHTHPEEARVIAARGAFHVQRYMNAVTTMDYVL 312
            Y G +R SKIV T NPS WEGD RT EALASGA++ VD M+ P P P +D  HVV +D +++  F EKL Y+   P+EA  IAA G  H  +Y  AV+ MD+VL
Sbjct:  354 YFGAMRKSKIVVTCNPSHWEGDFRTFEALASGALIFVDEMYVPHPRPFVDGEHVVVYDNSDEKAFAEKLAYYLARPDEAAKIAAAGLKHALKYHRAVSRMDWVL 457          
BLAST of mRNA_P-wetherbeei_contig180.1.1 vs. uniprot
Match: A0A7S3JV67_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JV67_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.380e-26
Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 1
Query:    1 YLGTLRASKIVCTANPSFWEGDHRTGEALASGAMVMVDHMWSPRPYPLIDNWHVVYFDPANKVDFMEKLHYFHTHPEEARVIAARGAFHVQRYMNAVTTMDYVL 312
            Y   +R+SKIV TANPS WEGD R  EA+ASGA+V VD M++P P+P I   H++ +D +++  F   L Y+  HPEEAR+IA  G  H  RY  AV+ MD++L
Sbjct:  359 YFAAMRSSKIVVTANPSHWEGDFRFFEAVASGALVFVDEMYTPHPHPFIHKRHLIVYDNSDQDTFQNLLKYYLEHPEEARIIARAGLRHALRYHRAVSRMDWIL 462          
BLAST of mRNA_P-wetherbeei_contig180.1.1 vs. uniprot
Match: A0A7S3JU57_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU57_9STRA)

HSP 1 Score: 107 bits (268), Expect = 4.040e-25
Identity = 49/104 (47.12%), Postives = 69/104 (66.35%), Query Frame = 1
Query:    1 YLGTLRASKIVCTANPSFWEGDHRTGEALASGAMVMVDHMWSPRPYPLIDNWHVVYFDPANKVDFMEKLHYFHTHPEEARVIAARGAFHVQRYMNAVTTMDYVL 312
            Y   +R++KI+ TANPSFWEGD R  EA+ASGA+V VD M+ P P+P I   H++ +D +++  F   L Y+  HP+EAR IA  G  H  RY  A++ MD++L
Sbjct:  353 YFDAMRSTKILVTANPSFWEGDFRFFEAVASGALVFVDEMYIPHPHPFIHGKHLIVYDNSDQQTFQNSLKYYLEHPQEARAIARAGLRHALRYHRALSRMDWIL 456          
BLAST of mRNA_P-wetherbeei_contig180.1.1 vs. uniprot
Match: A0A7S2WPM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPM1_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.560e-23
Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = 1
Query:    1 YLGTLRASKIVCTANPSFWEGDHRTGEALASGAMVMVDHMWSPRPYPLIDNWHVVYFDPANKVDFMEKLHYFHTHPEEARVIAARGAFHVQRYMNAVTTMDYVLTT 318
            Y+  +R +KIV T NPS WEGD R  EA+ASGA+V VDH  +P  +P  D  H+V ++ +++ D + KL ++  HP++ R +A  G  H  R+  AV+ MDYVL T
Sbjct:  236 YMAQMREAKIVVTCNPSKWEGDFRLWEAMASGALVFVDHTTTPLAFPPQDGVHLVVYNNSDRTDLITKLRFYLDHPDQLRAVAQAGYLHALRHHRAVSRMDYVLAT 341          
BLAST of mRNA_P-wetherbeei_contig180.1.1 vs. uniprot
Match: A0A812Y7Y4_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y7Y4_SYMMI)

HSP 1 Score: 94.7 bits (234), Expect = 1.990e-22
Identity = 43/106 (40.57%), Postives = 66/106 (62.26%), Query Frame = 1
Query:    1 YLGTLRASKIVCTANPSFWEGDHRTGEALASGAMVMVDHMWSPRPYPLIDNWHVVYFDPANKVDFMEKLHYFHTHPEEARVIAARGAFHVQRYMNAVTTMDYVLTT 318
            Y   +  ++I+ TANPS WEGD R  EA+ASGA++ VD M++PRP+ L  + HVVY++  NK D   KL ++  + ++ R IA  G  H  ++  A   +DY++ T
Sbjct:   13 YFNQMFRARIIVTANPSGWEGDFRFMEAIASGALIFVDRMFTPRPHTLEHDQHVVYYNNMNKSDLFNKLDFYRQNVKKGRNIAISGYLHAMKFHRAACLLDYIMRT 118          
BLAST of mRNA_P-wetherbeei_contig180.1.1 vs. uniprot
Match: A0A7C2A803_9BACT (Glycosyltransferase family 1 protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C2A803_9BACT)

HSP 1 Score: 84.0 bits (206), Expect = 1.840e-18
Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 1
Query:    1 YLGTLRASKIVCTANPSFWEGDHRTGEALASGAMVMVDHMWSPRPYPLIDNWHVVYFDPANK--VDFMEKLHYFHTHPEEARVIAARGAFHVQRYMNAVTTMDYVL 312
            Y   L+ S+IV T NP  W+GDHRT EALA+GA+V VD M+ P  +PLID  H ++++P++    +   ++ Y+  + +EA+VIA  G     +Y      +D +L
Sbjct:   34 YFRLLKRSRIVVTCNPGRWDGDHRTWEALANGALVFVDKMYFPLAHPLIDGKHCIFYEPSDNGLAELGIRILYYIENQKEAKVIAKEGHEFAMKYHRTSNRIDEIL 139          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig180.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A836C6J7_9STRA2.490e-4059.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ66_9STRA1.890e-3853.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CF83_9STRA5.250e-3858.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2SP70_9STRA3.840e-2750.96Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
F0Y0E2_AURAN8.750e-2752.88Thioesterase domain-containing protein n=1 Tax=Aur... [more]
A0A7S3JV67_9STRA2.380e-2650.00Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A7S3JU57_9STRA4.040e-2547.12Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2WPM1_9STRA1.560e-2344.34Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A812Y7Y4_SYMMI1.990e-2240.57Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7C2A803_9BACT1.840e-1838.68Glycosyltransferase family 1 protein n=1 Tax=bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig180contigP-wetherbeei_contig180:3420..3737 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog44056.XP_009034099.1
PFAMsGlyco_trans_1_2
Model size318
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.43e-27
EggNOG OGs2ERJ3@1|root,2SUBP@2759|Eukaryota
DescriptionGlycosyl transferases group 1
Cds size318
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186133.2354658-CDS-P-wetherbeei_contig180:3419..37371683186133.2354658-CDS-P-wetherbeei_contig180:3419..3737Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig180 3420..3737 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig180.1.1prot_P-wetherbeei_contig180.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig180 3420..3737 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig180.1.1

>prot_P-wetherbeei_contig180.1.1 ID=prot_P-wetherbeei_contig180.1.1|Name=mRNA_P-wetherbeei_contig180.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp
YLGTLRASKIVCTANPSFWEGDHRTGEALASGAMVMVDHMWSPRPYPLID
NWHVVYFDPANKVDFMEKLHYFHTHPEEARVIAARGAFHVQRYMNAVTTM
DYVLTT
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mRNA from alignment at P-wetherbeei_contig180:3420..3737-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig180.1.1 ID=mRNA_P-wetherbeei_contig180.1.1|Name=mRNA_P-wetherbeei_contig180.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig180:3420..3737- (Phaeothamnion wetherbeei SAG_119_79)
TACCTCGGCACCCTTCGCGCCTCGAAGATTGTATGCACCGCCAACCCATC CTTCTGGGAAGGTGACCACCGCACCGGAGAGGCGCTGGCGTCGGGTGCCA TGGTGATGGTGGACCACATGTGGTCGCCGCGGCCGTACCCGCTCATCGAC AACTGGCACGTCGTGTATTTCGACCCGGCAAACAAAGTGGACTTCATGGA GAAGCTCCACTATTTTCACACACATCCAGAAGAGGCGCGGGTGATTGCTG CGCGCGGAGCCTTTCACGTGCAGCGCTATATGAATGCGGTGACGACGATG GACTATGTTTTGACGACC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig180:3420..3737-

>mRNA_P-wetherbeei_contig180.1.1 ID=mRNA_P-wetherbeei_contig180.1.1|Name=mRNA_P-wetherbeei_contig180.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig180:3420..3737- (Phaeothamnion wetherbeei SAG_119_79)
TACCTCGGCACCCTTCGCGCCTCGAAGATTGTATGCACCGCCAACCCATC
CTTCTGGGAAGGTGACCACCGCACCGGAGAGGCGCTGGCGTCGGGTGCCA
TGGTGATGGTGGACCACATGTGGTCGCCGCGGCCGTACCCGCTCATCGAC
AACTGGCACGTCGTGTATTTCGACCCGGCAAACAAAGTGGACTTCATGGA
GAAGCTCCACTATTTTCACACACATCCAGAAGAGGCGCGGGTGATTGCTG
CGCGCGGAGCCTTTCACGTGCAGCGCTATATGAATGCGGTGACGACGATG
GACTATGTTTTGACGACC
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