mRNA_P-wetherbeei_contig17941.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17941.1.1
Unique NamemRNA_P-wetherbeei_contig17941.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17941.1.1 vs. uniprot
Match: D8LQQ0_ECTSI (GPI ethanolamine phosphate transferase 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQQ0_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 8.070e-28
Identity = 79/187 (42.25%), Postives = 94/187 (50.27%), Query Frame = 1
Query:    4 WAECGRSLFFLTGHHNQFSRLQYACAFIGFDEFHFRAAGALLFVNTFGTEILAALAFPEVAAARMAAAQATAAA-----------------------------------------------------------------SLLRELARLCLLHALLNSARMLLSAANVALQRDHLMLWAVFAPKFLFD 369
            W+  GR+ FFLTGHHNQFSRLQY+ AF+GFDEF F+  G LLF+NTFGTEILAALA P  AAA  A+  +  AA                                                                 S+L  + RL  L  LL++ R  LSAANV++QR HLMLWAVFAPKF+FD
Sbjct: 1100 WSVVGRAFFFLTGHHNQFSRLQYSAAFVGFDEFDFKVGGVLLFLNTFGTEILAALALPLAAAAAAASGVSQDAAPPVLPEAVSGSSRPNDRQSLSSPPSPRPHSVAGRWDGNHPDDAGNDAAXXXXXXXXXXXXXXETTSMLSAMERLSGLTLLLSAIRTFLSAANVSVQRGHLMLWAVFAPKFVFD 1286          
BLAST of mRNA_P-wetherbeei_contig17941.1.1 vs. uniprot
Match: A0A4D9CYS9_9STRA (GPI ethanolamine phosphate transferase 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYS9_9STRA)

HSP 1 Score: 102 bits (254), Expect = 7.800e-23
Identity = 60/118 (50.85%), Postives = 78/118 (66.10%), Query Frame = 1
Query:   16 GRSLFFLTGHHNQFSRLQYACAFIGFDEFHFRAAGALLFVNTFGTEILAALAFPEVAAARMAAAQATAAASLLRELARLCLLHALLNSARMLLSAANVALQRDHLMLWAVFAPKFLFD 369
            GR+ FF TGHH+QF+RLQY+ AF+GFDEF F   G LLF+NTFGTE+L  L         ++ A ++ +ASLL  L        L++  R LL+   V LQR HLM+WA+FAPKF+FD
Sbjct: 1016 GRAFFFATGHHSQFNRLQYSSAFVGFDEFSFVIGGCLLFLNTFGTELLVLLLLGHDV---LSCASSSYSASLLPSLGT----KLLVSDFRCLLTTLCVLLQRRHLMVWAIFAPKFIFD 1126          
BLAST of mRNA_P-wetherbeei_contig17941.1.1 vs. uniprot
Match: G4ZDA1_PHYSP (GPI ethanolamine phosphate transferase 3 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZDA1_PHYSP)

HSP 1 Score: 96.3 bits (238), Expect = 1.110e-20
Identity = 61/123 (49.59%), Postives = 74/123 (60.16%), Query Frame = 1
Query:    1 MWAECGRSLFFLTGHHNQFSRLQYACAFIGFDEFHFRAAGALLFVNTFGTEILAALAFPEVAAARMAAAQATAAASLLRELARLCLLHALLNSARMLLSAANVALQRDHLMLWAVFAPKFLFD 369
            +WA C    FF TGH N F+ LQ A  F+GFD F+F AAGALL +NTFG   LA LA P +A +R           L +E  RL L  +   S   L+S   VALQR HLM+WA+FAPKF+FD
Sbjct:  831 LWASCSYQAFFTTGHANTFTSLQNAAGFVGFDVFNFYAAGALLGLNTFGCFALAVLALPWLALSRQQC-------RLGQE--RLALAFSAYFSLNALVSTLFVALQRRHLMVWAIFAPKFIFD 944          
BLAST of mRNA_P-wetherbeei_contig17941.1.1 vs. uniprot
Match: M4BN20_HYAAE (GPI ethanolamine phosphate transferase 3 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN20_HYAAE)

HSP 1 Score: 92.4 bits (228), Expect = 2.470e-19
Identity = 57/123 (46.34%), Postives = 73/123 (59.35%), Query Frame = 1
Query:    1 MWAECGRSLFFLTGHHNQFSRLQYACAFIGFDEFHFRAAGALLFVNTFGTEILAALAFPEVAAARMAAAQATAAASLLRELARLCLLHALLNSARMLLSAANVALQRDHLMLWAVFAPKFLFD 369
            +WA C    FF TGH N F+ LQ A  F+GFD F F  AGALL +NTFG   +A LA P +A  R++  +  A A            + +LN+   L+S   VALQR HLM+WA+FAPKF+FD
Sbjct:  844 IWASCSYQAFFTTGHANTFTSLQNAAGFVGFDNFSFYGAGALLGLNTFGCFAIAILALPWLALNRLSDGRTMALAFSA---------YFVLNA---LISTLFVALQRRHLMVWAIFAPKFIFD 954          
BLAST of mRNA_P-wetherbeei_contig17941.1.1 vs. uniprot
Match: A0A6G0SGN3_9STRA (GPI ethanolamine phosphate transferase 3 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0SGN3_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.470e-19
Identity = 59/123 (47.97%), Postives = 73/123 (59.35%), Query Frame = 1
Query:    1 MWAECGRSLFFLTGHHNQFSRLQYACAFIGFDEFHFRAAGALLFVNTFGTEILAALAFPEVAAARMAAAQATAAASLLRELARLCLLHALLNSARMLLSAANVALQRDHLMLWAVFAPKFLFD 369
            +WA C    FF TGH N F+ LQ A  F+GFD F+F AAGALL +NTFG   LA LA P +  +R    Q+           RL L  ++  S   L+S   VALQR HLM+WA+FAPKF+FD
Sbjct:  841 LWASCSYQAFFTTGHANTFTSLQNAAGFVGFDIFNFYAAGALLGLNTFGCFALAVLALPWLVLSRH---QSHFCGE------RLPLAFSVYFSLNALVSTPFVALQRRHLMVWAIFAPKFIFD 954          
BLAST of mRNA_P-wetherbeei_contig17941.1.1 vs. uniprot
Match: A0A662X9S6_9STRA (GPI ethanolamine phosphate transferase 3 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9S6_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.180e-18
Identity = 58/125 (46.40%), Postives = 72/125 (57.60%), Query Frame = 1
Query:    1 MWAECGRSLFFLTGHHNQFSRLQYACAFIGFDEFHFRAAGALLFVNTFGTEILAALAFP--EVAAARMAAAQATAAASLLRELARLCLLHALLNSARMLLSAANVALQRDHLMLWAVFAPKFLFD 369
            +WA      FF TGH N F+ LQ A  F+GFD FHF AAGALL +N+FG   LA LA P  ++A  R  +       + L   A        LN+   L+S   VALQR HLM+WA+FAPKF+FD
Sbjct:  874 LWASVSYQAFFTTGHANTFTSLQNAAGFVGFDSFHFYAAGALLGLNSFGCYALAVLALPWLQLALERSRSRSTQTPLAFLGYFA--------LNA---LVSTLFVALQRRHLMVWAIFAPKFIFD 987          
BLAST of mRNA_P-wetherbeei_contig17941.1.1 vs. uniprot
Match: A0A225WUW6_9STRA (GPI ethanolamine phosphate transferase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WUW6_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.390e-17
Identity = 54/123 (43.90%), Postives = 68/123 (55.28%), Query Frame = 1
Query:    1 MWAECGRSLFFLTGHHNQFSRLQYACAFIGFDEFHFRAAGALLFVNTFGTEILAALAFPEVAAARMAAAQATAAASLLRELARLCLLHALLNSARMLLSAANVALQRDHLMLWAVFAPKFLFD 369
            +WA C    FF TGH N F+ LQ A  F+GFD F+F  AG LL +NTFG   LA LA P +   R      T+         ++ L  +   S    +S   VALQR HLM+WA+FAPKF+FD
Sbjct:  779 LWASCSYQAFFTTGHANTFTSLQNASGFVGFDIFNFYVAGTLLGLNTFGCFALAVLALPWLNLQRHQPQSHTS---------KMLLAFSTYFSCNAAVSTLFVALQRRHLMVWAIFAPKFIFD 892          
BLAST of mRNA_P-wetherbeei_contig17941.1.1 vs. uniprot
Match: W2GSE0_PHYPR (GPI ethanolamine phosphate transferase 3 n=8 Tax=Phytophthora TaxID=4783 RepID=W2GSE0_PHYPR)

HSP 1 Score: 87.4 bits (215), Expect = 1.400e-17
Identity = 57/123 (46.34%), Postives = 71/123 (57.72%), Query Frame = 1
Query:    1 MWAECGRSLFFLTGHHNQFSRLQYACAFIGFDEFHFRAAGALLFVNTFGTEILAALAFPEVAAARMAAAQATAAASLLRELARLCLLHALLNSARMLLSAANVALQRDHLMLWAVFAPKFLFD 369
            +WA C    FF +GH N F+ LQ A  F+GFD F+F  AGALL +NTFG   LA LA P +   R    Q++   +LL   A          S   L+S   VALQR HLM+WA+FAPKF+FD
Sbjct:  842 LWASCSYQAFFTSGHANTFTSLQNAAGFVGFDTFNFYIAGALLGLNTFGCFALAVLALPWLNW-RQHQPQSSGVNTLLAFPAYF--------SLNALVSTLFVALQRRHLMVWAIFAPKFIFD 955          
BLAST of mRNA_P-wetherbeei_contig17941.1.1 vs. uniprot
Match: A0A5D6XJ53_9STRA (GPI ethanolamine phosphate transferase 3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJ53_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 3.550e-17
Identity = 59/129 (45.74%), Postives = 74/129 (57.36%), Query Frame = 1
Query:    1 MWAE-CGRSLFFLTGHHNQFSRLQYACAFIGFDEFHFRAAGALLFVNTFGTEILAALAFPEVAAARMAAAQATAAASLLRELARLCLLHALLN-----SARMLLSAANVALQRDHLMLWAVFAPKFLFD 369
            +W+  CG S FF TGH N F+ LQ A  F+G D F+F  AGALL +NTFG+ +L  L  P   A   A A A    +    +AR C   A L      +    +S A VALQR HLM+WA+FAPKF+FD
Sbjct:  825 LWSVVCGHSFFF-TGHQNTFTSLQNAAGFVGLDAFYFYGAGALLGLNTFGSYLLWLLFLPLALARPRATAAAAGDRAGALVVARACWRRAALTVTLFFALNASVSTAFVALQRRHLMVWAIFAPKFIFD 952          
BLAST of mRNA_P-wetherbeei_contig17941.1.1 vs. uniprot
Match: A0A3M6VM76_9STRA (GPI ethanolamine phosphate transferase 3 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VM76_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 4.840e-17
Identity = 54/123 (43.90%), Postives = 66/123 (53.66%), Query Frame = 1
Query:    1 MWAECGRSLFFLTGHHNQFSRLQYACAFIGFDEFHFRAAGALLFVNTFGTEILAALAFPEVAAARMAAAQATAAASLLRELARLCLLHALLNSARMLLSAANVALQRDHLMLWAVFAPKFLFD 369
            +WA C    FF TGH N F+ LQ A  F+G D F+F  AG LL +NTFG   LA LA P +   R +   A   A             +   S   L+S   VALQR HLM+WA+FAPKF+FD
Sbjct:  839 LWASCSYQAFFTTGHANTFTSLQNAAGFVGCDVFNFYVAGGLLGLNTFGCFALAVLALPWLNLKRHSDGTAVVLA------------FSAYFSLNALVSTVFVALQRRHLMVWAIFAPKFIFD 949          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17941.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQQ0_ECTSI8.070e-2842.25GPI ethanolamine phosphate transferase 3 n=2 Tax=E... [more]
A0A4D9CYS9_9STRA7.800e-2350.85GPI ethanolamine phosphate transferase 3 n=2 Tax=M... [more]
G4ZDA1_PHYSP1.110e-2049.59GPI ethanolamine phosphate transferase 3 n=1 Tax=P... [more]
M4BN20_HYAAE2.470e-1946.34GPI ethanolamine phosphate transferase 3 n=1 Tax=H... [more]
A0A6G0SGN3_9STRA2.470e-1947.97GPI ethanolamine phosphate transferase 3 n=1 Tax=P... [more]
A0A662X9S6_9STRA2.180e-1846.40GPI ethanolamine phosphate transferase 3 n=2 Tax=N... [more]
A0A225WUW6_9STRA1.390e-1743.90GPI ethanolamine phosphate transferase n=1 Tax=Phy... [more]
W2GSE0_PHYPR1.400e-1746.34GPI ethanolamine phosphate transferase 3 n=8 Tax=P... [more]
A0A5D6XJ53_9STRA3.550e-1745.74GPI ethanolamine phosphate transferase 3 n=1 Tax=P... [more]
A0A3M6VM76_9STRA4.840e-1743.90GPI ethanolamine phosphate transferase 3 n=2 Tax=P... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17941contigP-wetherbeei_contig17941:56..652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LQQ0
Preferred namePIGO
PFAMsPhosphodiest
Model size372
Max annot lvl2759|Eukaryota
KEGG rclassRC00017
KEGG koko:K05288
KEGG ReactionR05923,R08107
KEGG Pathwayko00563,ko01100,map00563,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016780,GO:0019538,GO:0019637,GO:0031224,GO:0031984,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0051377,GO:0071704,GO:0090407,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509
Exons2
Evalue1.32e-28
EggNOG OGsCOG1524@1|root,KOG2126@2759|Eukaryota
Descriptionmannose-ethanolamine phosphotransferase activity
Cds size372
COG categoryU
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186131.6010725-CDS-P-wetherbeei_contig17941:55..2051683186131.6010725-CDS-P-wetherbeei_contig17941:55..205Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17941 56..205 -
1683186131.6112938-CDS-P-wetherbeei_contig17941:430..6521683186131.6112938-CDS-P-wetherbeei_contig17941:430..652Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17941 431..652 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17941.1.1prot_P-wetherbeei_contig17941.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17941 56..652 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17941.1.1

>prot_P-wetherbeei_contig17941.1.1 ID=prot_P-wetherbeei_contig17941.1.1|Name=mRNA_P-wetherbeei_contig17941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=124bp
MWAECGRSLFFLTGHHNQFSRLQYACAFIGFDEFHFRAAGALLFVNTFGT
EILAALAFPEVAAARMAAAQATAAASLLRELARLCLLHALLNSARMLLSA
ANVALQRDHLMLWAVFAPKFLFDT
back to top

mRNA from alignment at P-wetherbeei_contig17941:56..652-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17941.1.1 ID=mRNA_P-wetherbeei_contig17941.1.1|Name=mRNA_P-wetherbeei_contig17941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=597bp|location=Sequence derived from alignment at P-wetherbeei_contig17941:56..652- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGGCGGAGTGCGGGCGGTCCCTCTTCTTTTTGACGGGCCACCACAA CCAGTTCTCGCGGCTGCAGTACGCCTGCGCCTTTATCGGCTTCGACGAGT TTCACTTCCGGGCAGCCGGGGCGCTACTATTCGTCAACACTTTCGGCACC GAAATTCTGGCGGCGCTCGCGTTTCCTGAGGTGGCGGCGGCCCGGATGGC CGCCGCGCAAGCTACCGCGGCTGTGGGGCAGAATCGCGGCCCGGCGCTCC TCGCAGGGTCTGGCACTTCGGGGGCTTCGGGGCCTGCAGCTGCAACGATG CTTGAAGGGACAGAGGGCACTTCAGCGGGCAAGAGCGGCACTAGCAGCGG CGACGGCGAGAGTGACGGTGGCGGCGACGTTTGCAGCAGCAGCGGCAGCG GCTTTGGCGGCGGTGGCAGCAGTGGCGGCGACAGCGACGACGGCGAGGCA TCGCTGCTGCGGGAGCTGGCGCGGCTCTGCCTGCTACACGCGCTCCTGAA CTCGGCGCGCATGCTGCTCTCCGCGGCCAACGTTGCGCTGCAGCGGGACC ACCTCATGCTGTGGGCGGTTTTCGCCCCCAAGTTTCTCTTCGACACC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig17941:56..652-

>mRNA_P-wetherbeei_contig17941.1.1 ID=mRNA_P-wetherbeei_contig17941.1.1|Name=mRNA_P-wetherbeei_contig17941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig17941:56..652- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGGCGGAGTGCGGGCGGTCCCTCTTCTTTTTGACGGGCCACCACAA
CCAGTTCTCGCGGCTGCAGTACGCCTGCGCCTTTATCGGCTTCGACGAGT
TTCACTTCCGGGCAGCCGGGGCGCTACTATTCGTCAACACTTTCGGCACC
GAAATTCTGGCGGCGCTCGCGTTTCCTGAGGTGGCGGCGGCCCGGATGGC
CGCCGCGCAAGCTACCGCGGCTGCATCGCTGCTGCGGGAGCTGGCGCGGC
TCTGCCTGCTACACGCGCTCCTGAACTCGGCGCGCATGCTGCTCTCCGCG
GCCAACGTTGCGCTGCAGCGGGACCACCTCATGCTGTGGGCGGTTTTCGC
CCCCAAGTTTCTCTTCGACACC
back to top