mRNA_P-wetherbeei_contig17928.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17928.1.1
Unique NamemRNA_P-wetherbeei_contig17928.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig17928.1.1 vs. uniprot
Match: A0A194WZF9_9HELO (Uncharacterized protein n=1 Tax=Mollisia scopiformis TaxID=149040 RepID=A0A194WZF9_9HELO)

HSP 1 Score: 51.2 bits (121), Expect = 5.390e-6
Identity = 19/37 (51.35%), Postives = 24/37 (64.86%), Query Frame = 1 
Query:    1 KRACDGCYISKVRCDGGFPSCPRCKRRGVECIYRYGV 111
            KR+C  C  +K  CDG FPSC RC +R V CIY++  
Sbjct:   48 KRSCTPCTKAKCHCDGSFPSCSRCVKRNVTCIYQHST 84
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BLAST of mRNA_P-wetherbeei_contig17928.1.1 vs. uniprot
Match: A0A142I723_9PEZI (Zinc finger protein n=2 Tax=Phomopsis leptostromiformis TaxID=291059 RepID=A0A142I723_9PEZI)

HSP 1 Score: 50.1 bits (118), Expect = 1.380e-5
Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 1 
Query:    1 KRACDGCYISKVRCDGGFPSCPRCKRRGVECIYRYGVRT--PAPRPSSPPS 147
            + +C+ C  SKVRC    P+C RC+R GVECIY    RT   AP  S PPS
Sbjct:   11 RASCNACNESKVRCSQRKPTCARCERNGVECIYGLSRRTHKDAPPISMPPS 61
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BLAST of mRNA_P-wetherbeei_contig17928.1.1 vs. uniprot
Match: UPI001C7FCC47 (uncharacterized protein n=1 Tax=Diaporthe citri TaxID=83186 RepID=UPI001C7FCC47)

HSP 1 Score: 49.7 bits (117), Expect = 1.890e-5
Identity = 25/51 (49.02%), Postives = 31/51 (60.78%), Query Frame = 1 
Query:    1 KRACDGCYISKVRCDGGFPSCPRCKRRGVECIYRYGVRT--PAPRPSSPPS 147
            + +C+ C  SKVRC    P+C RC+R GVEC+Y    RT   AP  S PPS
Sbjct:    9 RASCNACNESKVRCSQRKPTCARCERNGVECVYGLSRRTHKDAPPISMPPS 59
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BLAST of mRNA_P-wetherbeei_contig17928.1.1 vs. uniprot
Match: A0A423VNI7_9PEZI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Valsa malicola TaxID=356882 RepID=A0A423VNI7_9PEZI)

HSP 1 Score: 49.3 bits (116), Expect = 2.590e-5
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 1 
Query:    1 KRACDGCYISKVRCDGGFPSCPRCKRRGVECIYRYGVRT 117
            + +C+ C  SKVRC    P+C RC+R G+ECIY    RT
Sbjct:    9 RASCNACNESKVRCSQSKPTCARCERNGIECIYGLSRRT 47
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BLAST of mRNA_P-wetherbeei_contig17928.1.1 vs. uniprot
Match: UPI001E8DA363 (uncharacterized protein n=1 Tax=Boeremia exigua TaxID=749465 RepID=UPI001E8DA363)

HSP 1 Score: 48.9 bits (115), Expect = 3.520e-5
Identity = 19/41 (46.34%), Postives = 26/41 (63.41%), Query Frame = 1 
Query:    7 ACDGCYISKVRCDGGFPSCPRCKRRGVECIYRYGVRTPAPR 129
            ACD C  SK+RCD   P+C RC ++G++C+Y    R   PR
Sbjct:   23 ACDSCQQSKIRCDQERPTCRRCAKKGMKCVYSPARRAGRPR 63
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BLAST of mRNA_P-wetherbeei_contig17928.1.1 vs. uniprot
Match: B6QN76_TALMQ (C6 transcription factor, putative n=4 Tax=Talaromyces marneffei TaxID=37727 RepID=B6QN76_TALMQ)

HSP 1 Score: 48.9 bits (115), Expect = 3.560e-5
Identity = 22/43 (51.16%), Postives = 25/43 (58.14%), Query Frame = 1 
Query:    1 KRACDGCYISKVRCDGGFPSCPRCKRRGVECIYRYGVRTPAPR 129
            KRACDGC I KV+CDGG P C  C    + C +   V T  PR
Sbjct:   14 KRACDGCQIRKVKCDGGQP-CLSCANTKIACTFSRAVHTRGPR 55
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BLAST of mRNA_P-wetherbeei_contig17928.1.1 vs. uniprot
Match: A0A6G1JRK7_9PLEO (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Pleomassaria siparia CBS 279.74 TaxID=1314801 RepID=A0A6G1JRK7_9PLEO)

HSP 1 Score: 46.2 bits (108), Expect = 6.370e-5
Identity = 21/55 (38.18%), Postives = 31/55 (56.36%), Query Frame = 1 
Query:    1 KRACDGCYISKVRCDGGFPSCPRCKRRGVECIYRYGVRTPAPRPSSPPSPPSAVP 165
            + +CD C   KV+C    PSC RC + G++C+Y    R   P+  + PSP S +P
Sbjct:   38 RTSCDACQNLKVKCSQDKPSCRRCSKNGLDCVYSPLRRMGRPKRPTSPSPASLMP 92
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BLAST of mRNA_P-wetherbeei_contig17928.1.1 vs. uniprot
Match: A0A8K0SL82_9HYPO (Uncharacterized protein n=1 Tax=Stachybotrys elegans TaxID=80388 RepID=A0A8K0SL82_9HYPO)

HSP 1 Score: 48.1 bits (113), Expect = 6.520e-5
Identity = 19/31 (61.29%), Postives = 22/31 (70.97%), Query Frame = 1 
Query:    7 ACDGCYISKVRCDGGFPSCPRCKRRGVECIY 99
            AC  C   KVRCDGG PSC +C+R G +CIY
Sbjct:    9 ACKTCRDRKVRCDGGQPSCEKCRRAGDKCIY 39
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BLAST of mRNA_P-wetherbeei_contig17928.1.1 vs. uniprot
Match: A0A835YRF7_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRF7_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 6.680e-5
Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 1 
Query:    1 KRACDGCYISKVRCDGGFPSCPRCKRRGVECIY 99
            +  CDGC +SKVRC+G  P C RC+RR  EC+Y
Sbjct:   84 RTTCDGCTVSKVRCNGKKP-CARCERRNEECVY 115
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BLAST of mRNA_P-wetherbeei_contig17928.1.1 vs. uniprot
Match: A0A2T2N960_CORCC (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Corynespora cassiicola Philippines TaxID=1448308 RepID=A0A2T2N960_CORCC)

HSP 1 Score: 45.1 bits (105), Expect = 7.210e-5
Identity = 17/43 (39.53%), Postives = 25/43 (58.14%), Query Frame = 1 
Query:    1 KRACDGCYISKVRCDGGFPSCPRCKRRGVECIYRYGVRTPAPR 129
            +++CD C  SK+RC    PSC RC +  ++C+Y    R   PR
Sbjct:   16 RQSCDTCQASKIRCGQERPSCRRCVKYNIDCVYSVSRRAGRPR 58
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17928.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A194WZF9_9HELO5.390e-651.35Uncharacterized protein n=1 Tax=Mollisia scopiform... [more]
A0A142I723_9PEZI1.380e-550.98Zinc finger protein n=2 Tax=Phomopsis leptostromif... [more]
UPI001C7FCC471.890e-549.02uncharacterized protein n=1 Tax=Diaporthe citri Ta... [more]
A0A423VNI7_9PEZI2.590e-548.72Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
UPI001E8DA3633.520e-546.34uncharacterized protein n=1 Tax=Boeremia exigua Ta... [more]
B6QN76_TALMQ3.560e-551.16C6 transcription factor, putative n=4 Tax=Talaromy... [more]
A0A6G1JRK7_9PLEO6.370e-538.18Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A8K0SL82_9HYPO6.520e-561.29Uncharacterized protein n=1 Tax=Stachybotrys elega... [more]
A0A835YRF7_9STRA6.680e-557.58Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A2T2N960_CORCC7.210e-539.53Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17928contigP-wetherbeei_contig17928:423..742 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog209285.XP_006695412.1
PFAMsBRCT,Fungal_trans,PARP,PARP_reg,WGR,Zn_clus
Model size171
Max annot lvl4751|Fungi
KEGG koko:K10798
KEGG Pathwayko03410,ko04210,ko04212,ko04214,ko04217,map03410,map04210,map04212,map04214,map04217
KEGG ModuleM00296
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Evalue4.34e-09
EggNOG OGsKOG1037@1|root,KOG1037@2759|Eukaryota,38B7U@33154|Opisthokonta,3NV42@4751|Fungi,3QP9G@4890|Ascomycota,214S1@147550|Sordariomycetes,3U5K3@5139|Sordariales,3HCPN@35718|Chaetomiaceae
EC2.4.2.30
DescriptionPoly ADP-ribose polymerase
Cds size171
COG categoryKLO
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03036,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186131.171056-CDS-P-wetherbeei_contig17928:422..5321683186131.171056-CDS-P-wetherbeei_contig17928:422..532Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17928 423..532 +
1683186131.1809084-CDS-P-wetherbeei_contig17928:681..7421683186131.1809084-CDS-P-wetherbeei_contig17928:681..742Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17928 682..742 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17928.1.1prot_P-wetherbeei_contig17928.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17928 423..742 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17928.1.1

>prot_P-wetherbeei_contig17928.1.1 ID=prot_P-wetherbeei_contig17928.1.1|Name=mRNA_P-wetherbeei_contig17928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=57bp
KRACDGCYISKVRCDGGFPSCPRCKRRGVECIYRYGVRTPAPRPSSPPSP
PSAVPP*
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mRNA from alignment at P-wetherbeei_contig17928:423..742+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17928.1.1 ID=mRNA_P-wetherbeei_contig17928.1.1|Name=mRNA_P-wetherbeei_contig17928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=320bp|location=Sequence derived from alignment at P-wetherbeei_contig17928:423..742+ (Phaeothamnion wetherbeei SAG_119_79)
AAGCGCGCATGCGACGGCTGCTACATATCTAAAGTACGCTGCGACGGCGG
TTTTCCATCATGTCCGCGCTGCAAGCGGCGCGGGGTGGAGTGCATCTACA
GGTACGGTGTGTCTTATCTTCTCTTTATTTCGTTTCTCCCCTACCTCGGC
ATTTTTGACGGCGTGGGCGGACAAGAATACTGAAACGGAGCTCCTTCTGC
GTGCTCCCTTCGCTCACTGCGGCAGCGAGAAGCGACGCGGCGGCTCCTCC
AAGCGCAAGCAGGACGCCGGCTCCCCGCCCTTCGTCACCGCCATCGCCAC
CTTCGGCAGTCCCGCCTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17928:423..742+

>mRNA_P-wetherbeei_contig17928.1.1 ID=mRNA_P-wetherbeei_contig17928.1.1|Name=mRNA_P-wetherbeei_contig17928.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=171bp|location=Sequence derived from alignment at P-wetherbeei_contig17928:423..742+ (Phaeothamnion wetherbeei SAG_119_79)
AAGCGCGCATGCGACGGCTGCTACATATCTAAAGTACGCTGCGACGGCGG
TTTTCCATCATGTCCGCGCTGCAAGCGGCGCGGGGTGGAGTGCATCTACA
GGTACGGTGTCAGGACGCCGGCTCCCCGCCCTTCGTCACCGCCATCGCCA
CCTTCGGCAGTCCCGCCTTGA
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