mRNA_P-wetherbeei_contig17905.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17905.1.1
Unique NamemRNA_P-wetherbeei_contig17905.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig17905.1.1 vs. uniprot
Match: A0A2X0P2P1_9BASI (Arginyltransferase n=3 Tax=Microbotryum TaxID=34416 RepID=A0A2X0P2P1_9BASI)

HSP 1 Score: 60.5 bits (145), Expect = 1.670e-9
Identity = 28/44 (63.64%), Postives = 31/44 (70.45%), Query Frame = 1 
Query:    1 LRQTCCPQYSIRLDANAFQPSKSQRQVLRRLRRFVDGGDSAGVP 132
            +R TCCPQY+I LDA AF P+KSQRQVL R   FV  GD  G P
Sbjct:  111 MRSTCCPQYTISLDAAAFVPAKSQRQVLNRFTAFVIDGDHEGKP 154
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BLAST of mRNA_P-wetherbeei_contig17905.1.1 vs. uniprot
Match: A0A511K6P3_RHOTO (Arginyltransferase n=1 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A511K6P3_RHOTO)

HSP 1 Score: 60.5 bits (145), Expect = 1.670e-9
Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 1 
Query:    1 LRQTCCPQYSIRLDANAFQPSKSQRQVLRRLRRFVDGGDSAGVP 132
            +R TCCPQY+I LDAN F+PS+SQRQVL R   F+  G+  G P
Sbjct:   86 MRNTCCPQYTISLDANGFKPSRSQRQVLARFNAFLRTGEREGQP 129
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BLAST of mRNA_P-wetherbeei_contig17905.1.1 vs. uniprot
Match: A0A0L0SYS0_ALLM3 (Arginyl-tRNA--protein transferase 1 n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SYS0_ALLM3)

HSP 1 Score: 60.1 bits (144), Expect = 2.280e-9
Identity = 25/37 (67.57%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 LRQTCCPQYSIRLDANAFQPSKSQRQVLRRLRRFVDG 111
            + +TCCPQY+I+LDA AF+PSK  RQVL +LRRF+DG
Sbjct:   62 MHKTCCPQYTIKLDALAFRPSKQHRQVLNKLRRFLDG 98
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BLAST of mRNA_P-wetherbeei_contig17905.1.1 vs. uniprot
Match: UPI001F9AC301 (arginine-tRNA-protein transferase n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=UPI001F9AC301)

HSP 1 Score: 59.7 bits (143), Expect = 3.110e-9
Identity = 26/40 (65.00%), Postives = 34/40 (85.00%), Query Frame = 1 
Query:    1 LRQTCCPQYSIRLDANAFQPSKSQRQVLRRLRRFVDGGDS 120
            L+++CCPQY+IRLDAN F+PSKSQR++L R  RFV  GD+
Sbjct:   69 LKKSCCPQYTIRLDANKFKPSKSQRKLLNRWNRFVLRGDT 108
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BLAST of mRNA_P-wetherbeei_contig17905.1.1 vs. uniprot
Match: A0A0L0SNX1_ALLM3 (Arginyl-tRNA--protein transferase 1 n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SNX1_ALLM3)

HSP 1 Score: 58.9 bits (141), Expect = 5.830e-9
Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 1 
Query:    1 LRQTCCPQYSIRLDANAFQPSKSQRQVLRRLRRFVDG 111
            + +TCCPQY+I+LDA AF+P+K  RQVL +LRRF+DG
Sbjct:   62 MHKTCCPQYTIKLDALAFRPAKQHRQVLNKLRRFLDG 98
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BLAST of mRNA_P-wetherbeei_contig17905.1.1 vs. uniprot
Match: A0A060S8J3_PYCCI (Arginyltransferase n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S8J3_PYCCI)

HSP 1 Score: 58.5 bits (140), Expect = 7.960e-9
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 1 
Query:    1 LRQTCCPQYSIRLDANAFQPSKSQRQVLRRLRRFVDGGDS 120
            L+++CCPQY+I+LDA  F+PSKSQR++L R  RFV  GDS
Sbjct:   18 LKRSCCPQYTIKLDALQFKPSKSQRKLLNRFNRFVSQGDS 57
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BLAST of mRNA_P-wetherbeei_contig17905.1.1 vs. uniprot
Match: A0A427YM33_9TREE (Arginyltransferase n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YM33_9TREE)

HSP 1 Score: 58.2 bits (139), Expect = 1.090e-8
Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 1 
Query:    1 LRQTCCPQYSIRLDANAFQPSKSQRQVLRRLRRFVDGGDSAG 126
            + +TCCPQY+IRLDA AF+PSK  RQV+ R  RFV  G   G
Sbjct:   67 MARTCCPQYTIRLDAKAFKPSKKHRQVMNRWSRFVSAGTKPG 108
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BLAST of mRNA_P-wetherbeei_contig17905.1.1 vs. uniprot
Match: A0A371DN47_9APHY (Arginyltransferase n=1 Tax=Polyporus brumalis TaxID=139420 RepID=A0A371DN47_9APHY)

HSP 1 Score: 57.4 bits (137), Expect = 1.300e-8
Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 1 
Query:    1 LRQTCCPQYSIRLDANAFQPSKSQRQVLRRLRRFVDGGD 117
            LR++CCPQY+I+LDA AF+PSKSQR+++ R  RFV  GD
Sbjct:   70 LRRSCCPQYTIKLDALAFKPSKSQRKLVNRWNRFVTYGD 108
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BLAST of mRNA_P-wetherbeei_contig17905.1.1 vs. uniprot
Match: A0A1Y1U784_9TREE (Arginyltransferase n=1 Tax=Kockovaella imperatae TaxID=4999 RepID=A0A1Y1U784_9TREE)

HSP 1 Score: 57.8 bits (138), Expect = 1.440e-8
Identity = 23/35 (65.71%), Postives = 30/35 (85.71%), Query Frame = 1 
Query:    7 QTCCPQYSIRLDANAFQPSKSQRQVLRRLRRFVDG 111
            +TCCPQY+IRLDA AF+PSK QRQV+ R+ R++ G
Sbjct:   10 RTCCPQYTIRLDAQAFKPSKKQRQVINRMNRYLSG 44
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BLAST of mRNA_P-wetherbeei_contig17905.1.1 vs. uniprot
Match: D7G6D9_ECTSI (Arginyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6D9_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.490e-8
Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 1 
Query:    1 LRQTCCPQYSIRLDANAFQPSKSQRQVLRRLRRFVDGGDSAG 126
            + +TCCPQY+IRLD   F+ +K QR VL RLRR++DG   AG
Sbjct:   62 MHETCCPQYTIRLDVTRFKHTKGQRHVLNRLRRYLDGDKDAG 103
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17905.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2X0P2P1_9BASI1.670e-963.64Arginyltransferase n=3 Tax=Microbotryum TaxID=3441... [more]
A0A511K6P3_RHOTO1.670e-959.09Arginyltransferase n=1 Tax=Rhodosporidium toruloid... [more]
A0A0L0SYS0_ALLM32.280e-967.57Arginyl-tRNA--protein transferase 1 n=1 Tax=Allomy... [more]
UPI001F9AC3013.110e-965.00arginine-tRNA-protein transferase n=1 Tax=Fomitops... [more]
A0A0L0SNX1_ALLM35.830e-964.86Arginyl-tRNA--protein transferase 1 n=1 Tax=Allomy... [more]
A0A060S8J3_PYCCI7.960e-962.50Arginyltransferase n=1 Tax=Pycnoporus cinnabarinus... [more]
A0A427YM33_9TREE1.090e-859.52Arginyltransferase n=1 Tax=Saitozyma podzolica Tax... [more]
A0A371DN47_9APHY1.300e-864.10Arginyltransferase n=1 Tax=Polyporus brumalis TaxI... [more]
A0A1Y1U784_9TREE1.440e-865.71Arginyltransferase n=1 Tax=Kockovaella imperatae T... [more]
D7G6D9_ECTSI1.490e-857.14Arginyltransferase n=2 Tax=Ectocarpus TaxID=2879 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17905contigP-wetherbeei_contig17905:138..269 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog5286.M7X3T2
Preferred nameATE1
PFAMsATE_C,ATE_N
Model size132
Max annot lvl4751|Fungi
KEGG rclassRC00055,RC00064
KEGG koko:K00685
KEGG ReactionR03862
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575
Exons1
Evalue2e-10
EggNOG OGsCOG2935@1|root,KOG1193@2759|Eukaryota,38C7Y@33154|Opisthokonta,3NX69@4751|Fungi,3UXUT@5204|Basidiomycota,2YDU1@29000|Pucciniomycotina
EC2.3.2.8
DescriptionInvolved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway
Cds size132
COG categoryO
BRITEko00000,ko01000,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186130.62717-CDS-P-wetherbeei_contig17905:137..2691683186130.62717-CDS-P-wetherbeei_contig17905:137..269Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17905 138..269 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17905.1.1prot_P-wetherbeei_contig17905.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17905 138..269 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17905.1.1

>prot_P-wetherbeei_contig17905.1.1 ID=prot_P-wetherbeei_contig17905.1.1|Name=mRNA_P-wetherbeei_contig17905.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=44bp
LRQTCCPQYSIRLDANAFQPSKSQRQVLRRLRRFVDGGDSAGVP
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mRNA from alignment at P-wetherbeei_contig17905:138..269+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17905.1.1 ID=mRNA_P-wetherbeei_contig17905.1.1|Name=mRNA_P-wetherbeei_contig17905.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=132bp|location=Sequence derived from alignment at P-wetherbeei_contig17905:138..269+ (Phaeothamnion wetherbeei SAG_119_79)
CTACGGCAGACGTGCTGTCCGCAGTACAGCATTCGCCTGGACGCCAATGC
CTTCCAGCCATCGAAAAGCCAACGCCAGGTCCTCCGCAGACTGCGTCGCT
TCGTCGACGGAGGTGACAGTGCCGGAGTGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17905:138..269+

>mRNA_P-wetherbeei_contig17905.1.1 ID=mRNA_P-wetherbeei_contig17905.1.1|Name=mRNA_P-wetherbeei_contig17905.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=132bp|location=Sequence derived from alignment at P-wetherbeei_contig17905:138..269+ (Phaeothamnion wetherbeei SAG_119_79)
CTACGGCAGACGTGCTGTCCGCAGTACAGCATTCGCCTGGACGCCAATGC
CTTCCAGCCATCGAAAAGCCAACGCCAGGTCCTCCGCAGACTGCGTCGCT
TCGTCGACGGAGGTGACAGTGCCGGAGTGCCG
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