mRNA_P-wetherbeei_contig17901.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17901.1.1
Unique NamemRNA_P-wetherbeei_contig17901.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17901.1.1 vs. uniprot
Match: A0A7Z9PU89_9BACT (Squalene--hopene cyclase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PU89_9BACT)

HSP 1 Score: 615 bits (1587), Expect = 7.800e-215
Identity = 298/443 (67.27%), Postives = 349/443 (78.78%), Query Frame = 1
Query:    1 VADRMLTLYQRSPFKPGRELAIKVCMEWIAARQENDGCWAGIQPPWIYAIMALSAEGYSLKHPMIKAGLDAFNHPWGHEEERGTFMQACTSPVWDTLLTQLAMLDCGLDCSNADFQKSLDWILDEQIVVDGDWKYKVPNAQCGGWCFEYENDTYPDIDDTAVAMIVLARS--LKSAKDPSRVHYALRRATDWVTAMVCSNGAWAAFDKDNTIDLIRRIPFSDFGEALDPPSVDVTAHVVEAFGWMGRDLSDPLVARAVDYIRREQEPEGSWFGRWGVNHIYGTGAVIPALEKVGENMQADYIVKXXXXXXXXQNADGGWGESCGSYMDDSLRGRGESTASQTGWALMALLAQGT--QRYRASIENGVDFLRRTQTSEGSWNEEYYTGTGFPGYGGGARRGNLEDIKT--QGLELSRGFMLRYHMYRHYFPLMALGRAREYLAK 1311
            +ADR+LT YQ+  + PGRE ++K+C+EWI  RQE DGCWAGIQPPWIYA+MAL  EGY+L HP+++ G   F+ PW  EE +G F+QACTSPVWDT+LTQLA+LDCG       + +SL+W+L +QI   GDWK K P  + GGW FEYEND YPDIDD AVAMIVLARS      K+  ++  AL RA  WV  M CSNGAWAAFDKDN  +LI  IPFSDFGE+LDPPSVDVTAHVVEA G++GRDLSDP+V+RAV YI+ EQE EGSWFGRWGVNHIYGTGAV+PALEKVGENMQADYI+K        QN DGGWGE+C SYMDDSLRGRGESTASQT WALM L+AQG   +RYRA+I  GV+FL RTQT+EG+W+EE +TGTGFPGYG GA+  +L+  +T  QG ELSRGFMLRYHMYRHYFPLMALGRA+   A+
Sbjct:  230 LADRVLTAYQKMGWNPGRENSVKLCLEWILRRQEADGCWAGIQPPWIYALMALRFEGYALDHPVLEKGWRCFDEPWAVEEPQGIFLQACTSPVWDTVLTQLALLDCGRGPGEDFYDRSLEWVLGQQIRSVGDWKMKCPELEPGGWAFEYENDYYPDIDDAAVAMIVLARSRCYDDVKN-EKIEQALERAAQWVLGMRCSNGAWAAFDKDNNEELISLIPFSDFGESLDPPSVDVTAHVVEALGYLGRDLSDPVVSRAVQYIQSEQENEGSWFGRWGVNHIYGTGAVLPALEKVGENMQADYIIKACDWLVEHQNEDGGWGETCASYMDDSLRGRGESTASQTAWALMGLVAQGAKLERYRAAIARGVNFLHRTQTAEGTWDEEAFTGTGFPGYGQGAKT-DLKAGQTLPQGRELSRGFMLRYHMYRHYFPLMALGRAKALWAE 670          
BLAST of mRNA_P-wetherbeei_contig17901.1.1 vs. uniprot
Match: A0A7X8XLL8_9BURK (Squalene--hopene cyclase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XLL8_9BURK)

HSP 1 Score: 543 bits (1400), Expect = 1.180e-186
Identity = 266/440 (60.45%), Postives = 322/440 (73.18%), Query Frame = 1
Query:    1 VADRMLTLYQRSPFKPGRELAIKVCMEWIAARQENDGCWAGIQPPWIYAIMALSAEGYSLKHPMIKAGLDAFNHPWGHEEERGTFMQACTSPVWDTLLTQLAMLDCGLDCSNADFQKSLDWILDEQIVVDGDWKYKVPNAQCGGWCFEYENDTYPDIDDTAVAMIVLARSLKSAKDPSRVHYALRRATDWVTAMVCSNGAWAAFDKDNTIDLIRRIPFSDFGEALDPPSVDVTAHVVEAFGWMGRDLSDPLVARAVDYIRREQEPEGSWFGRWGVNHIYGTGAVIPALEKVGENMQADYIVKXXXXXXXXQNADGGWGESCGSYMDDSLRGRGESTASQTGWALMALLAQGTQRYRASIENGVDFLRRTQTSEGSWNEEYYTGTGFPGYGGGARRGNLEDIKT-----QGLELSRGFMLRYHMYRHYFPLMALGRAREYL 1305
            + DR+L LY RSPF+PGR++A K+C+EW+  RQE DGCWAGIQPPWIYA++ L+  GY+L HP++KAGL+AFN PW +  E+GT++Q CTSPVWDT+L+ LAM DCG+DC N   QK LD++LD+QI   GDW+ KV     G W FEYENDTYPDIDDTAVAM+ LAR   S+ DP+RV  AL RAT W+  M   NGAWAAFD +N   L+ +IPFSDFGE+LDPPS DVTAHV+EA G +GRD++DP+VARAVDY+R EQE +GSWFGRWGVN+IYGTG V+                 XXXXXXXX       GE+C SYMD SLRG G ST+SQTGWAL+ALLA G      +I  G+++L  TQ  +G+W++  YTGTGFPGYG G R     D+KT     QG ELSRGFML Y MYRHYFPLMALGRAR +L
Sbjct:  224 LGDRLLNLYHRSPFQPGRDMATKLCIEWMVRRQEADGCWAGIQPPWIYALIGLNCHGYALDHPVMKAGLEAFNEPWAYPTEKGTYLQCCTSPVWDTMLSLLAMTDCGVDCQNPSVQKGLDYLLDQQIDAPGDWQVKVRGVPSGSWSFEYENDTYPDIDDTAVAMMALARLRDSSADPARVDQALERATLWILGMRSRNGAWAAFDVNNDSALVSQIPFSDFGESLDPPSADVTAHVIEALGNLGRDMTDPVVARAVDYLRAEQEDDGSWFGRWGVNYIYGTGLVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETCSSYMDPSLRGVGTSTSSQTGWALLALLAIGDHERDEAIGRGLNYLLETQRPDGTWDQPEYTGTGFPGYGRGVRT----DLKTGQTLDQGKELSRGFMLNYAMYRHYFPLMALGRARRHL 659          
BLAST of mRNA_P-wetherbeei_contig17901.1.1 vs. uniprot
Match: A0A7C7RJV1_9BACT (Squalene--hopene cyclase n=1 Tax=Thermodesulfobacteriaceae bacterium TaxID=2528252 RepID=A0A7C7RJV1_9BACT)

HSP 1 Score: 518 bits (1335), Expect = 3.070e-180
Identity = 248/427 (58.08%), Postives = 303/427 (70.96%), Query Frame = 1
Query:   37 PFKPGRELAIKVCMEWIAARQENDGCWAGIQPPWIYAIMALSAEGYSLKHPMIKAGLDAFNHPWGHEEERGTFMQACTSPVWDTLLTQLAMLDCGLDCSNAD-FQKSLDWILDEQIVVDGDWKYKVPNAQCGGWCFEYENDTYPDIDDTAVAMIVLARSLKSAKDPSRVHYALRRATDWVTAMVCSNGAWAAFDKDNTIDLIRRIPFSDFGEALDPPSVDVTAHVVEAFGWMGRDLSDPLVARAVDYIRREQEPEGSWFGRWGVNHIYGTGAVIPALEKVGENMQADYIVKXXXXXXXXQNADGGWGESCGSYMDDSLRGRGESTASQTGWALMALLAQGTQRYRASIENGVDFLRRTQTSEGSWNEEYYTGTGFPGYGGGARRGNLEDIKT---QGLELSRGFMLRYHMYRHYFPLMALGRAREYL 1305
            PF P R LA   C+EWI   Q+ DG W GIQPP IY++MAL  EGY L HP++     A +  W HE +   ++ A  SPVWDTLL+ +A LDCGL+   +D   +++ W++D  +   GDW+  V   Q G W FE  N  YPD+DDTAVA+ VLAR  +  KD S +  A+  AT W+ AM CSNG WAAFD+DN   L+ RIPF DFGEALDPPSVDVTAHV+EAFG MGR + DP+VARA+ Y++ EQEPEGSWFGRWGVNHIYGT AV+PALE VGE+M + Y ++        QN DGGWGESCGSYMDDSLRG+GESTASQTGWALMALLA    +YR +++ GV +L   Q  +G+W+E  YTGTGFPGYG G +R NLE       QG EL+RGFM+ Y+MYRHYFPLMALGRAR++L
Sbjct:    1 PFHPFRNLARTKCIEWIIRHQDADGIWGGIQPPTIYSLMALHHEGYRLDHPVLARCFHALDTHWSHEVDGCIYIHASESPVWDTLLSVMAQLDCGLEPGGSDSMYRAIHWLMDRFVEAPGDWQVYVRGVQTGAWAFERANTWYPDVDDTAVALTVLARIRRFMKDSSAIDRAMSIATGWIEAMQCSNGGWAAFDRDNDSRLVTRIPFCDFGEALDPPSVDVTAHVLEAFGLMGRGMDDPVVARAIQYVKNEQEPEGSWFGRWGVNHIYGTAAVLPALEAVGEDMSSQYCIRAGDWIAAHQNTDGGWGESCGSYMDDSLRGKGESTASQTGWALMALLALKADKYRKAVDEGVRWLLDRQKKDGTWDEPQYTGTGFPGYGIG-KRTNLEKAAEELDQGAELARGFMINYNMYRHYFPLMALGRARKWL 426          
BLAST of mRNA_P-wetherbeei_contig17901.1.1 vs. uniprot
Match: A0A355TSS1_9BACT (Squalene--hopene cyclase n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TSS1_9BACT)

HSP 1 Score: 523 bits (1347), Expect = 1.850e-179
Identity = 246/439 (56.04%), Postives = 320/439 (72.89%), Query Frame = 1
Query:    1 VADRMLTLYQ-RSPFKPGRELAIKVCMEWIAARQENDGCWAGIQPPWIYAIMALSAEGYSLKHPMIKAGLDAFNHPWGHEEERGTFMQACTSPVWDTLLTQLAMLDCGLDCSNADFQKSLDWILDEQIVVDGDWKYKVPNAQCGGWCFEYENDTYPDIDDTAVAMIVLARSLKSAKDPSRVHYALRRATDWVTAMVCSNGAWAAFDKDNTIDLIRRIPFSDFGEALDPPSVDVTAHVVEAFGWMGRDL-SDPLVARAVDYIRREQEPEGSWFGRWGVNHIYGTGAVIPALEKVGENMQADYIVKXXXXXXXXQNADGGWGESCGSYMDDSLRGRGESTASQTGWALMALLAQGTQRYRASIENGVDFLRRTQTSEGSWNEEYYTGTGFPGYGGGARRG-NLEDIKTQGLELSRGFMLRYHMYRHYFPLMALGRAREYLA 1308
            VAD++L LY  +SP KP R++A+K+C +WI  RQENDGCWAGIQPPWIYA++ L  +GYSLKHP++KAGL AFN PW  + E+GT++Q CTSPVWDT+L+ +A+ DCG++      QK+L + LDEQI+  GDW+   P  + GGW FEYEND YPD+DD AVA+I L R    A   + V  AL+R   W+ A+  SNGAW AFDKDNT DL+ +IPF DFGE LDPPS DVTAHV+EA+G  G+++ ++ +V +AV+Y+R EQE +GSWFGRWGVN+IYGTG ++PAL  VG +MQ+ ++ K        Q+ DGGWGESC +YMD SL+G+G++T SQTGWALM LLA     Y  +I  G+++L   Q  +G+W ++ YTGTGFPGYG GAR       +  QG ELSRGFML Y MYRHYFP+MALGRA ++ +
Sbjct:  160 VADKLLGLYTTKSPIKPLRKMALKLCEQWIIERQENDGCWAGIQPPWIYALVGLYTQGYSLKHPVMKAGLQAFNEPWAFKTEQGTYLQCCTSPVWDTVLSLVALSDCGVNGKQEMVQKALRYTLDEQILSRGDWQVNSPGVEPGGWAFEYENDCYPDVDDAAVALIALMRYRDQAASEAEVDVALKRGFRWLRALRSSNGAWGAFDKDNTCDLVCQIPFCDFGEVLDPPSADVTAHVIEAYGTAGQNIHNNMMVRKAVEYLRNEQETDGSWFGRWGVNYIYGTGLILPALHAVGVDMQSPWVKKAADWLVSVQHEDGGWGESCATYMDPSLKGQGKTTPSQTGWALMGLLALEDHSYDQAILRGLNWLIANQ-KDGTWEQKEYTGTGFPGYGAGARTEIKSGSVLDQGQELSRGFMLSYAMYRHYFPMMALGRALKHFS 597          
BLAST of mRNA_P-wetherbeei_contig17901.1.1 vs. uniprot
Match: A0A7Y5Q4Q0_9BACT (Squalene--hopene cyclase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7Y5Q4Q0_9BACT)

HSP 1 Score: 519 bits (1337), Expect = 6.860e-177
Identity = 256/436 (58.72%), Postives = 311/436 (71.33%), Query Frame = 1
Query:    7 DRMLTLYQRSPFKPGRELAIKVCMEWIAARQENDGCWAGIQPPWIYAIMALSAEGYSLKHPMIKAGLDAFNHPWGHEEERGTFMQACTSPVWDTLLTQLAMLDCGLDCSNAD-FQKSLDWILDEQIVVDGDWKYKVPNAQCGGWCFEYENDTYPDIDDTAVAMIVLARSLKSAKDPSRVHYALRRATDWVTAMVCSNGAWAAFDKDNTIDLIRRIPFSDFGEALDPPSVDVTAHVVEAFGWMGRDLSDPLVARAVDYIRREQEPEGSWFGRWGVNHIYGTGAVIPALEKVGENMQADYIVKXXXXXXXXQNADGGWGESCGSYMDDSLRGRGESTASQTGWALMALLAQGTQRYRASIENGVDFLRRTQTSEGSWNEEYYTGTGFPGYGGGARRGNLEDIKT--QGLELSRGFMLRYHMYRHYFPLMALGRAREYL 1305
            DR+  LYQ+ P +P RE AIK+C+EWI  RQE DGCW GIQPPW+Y++MAL+ EGY++ HP++  GLDAF HPW +E + G ++QAC SPVWDT+L  LA+ DCG DC +    Q+++ W+L+EQI   GDW+      + GGW FE+ENDTYPD+DD+AVA++VLAR   S+ D + V  A+ R  +WV  M C NGAWAAFDKDNT  L+ RIPF DFGEALDPPSVDVTAHVVEA G +GRDLSDP+V+RAVDYI+ +QE +GSWFGRWGVNHIYGT                     XXXXXXXX       GE+C SYMD SLRG G STASQT WALMALLA G++RY  +I  G D+L   Q  +G+W+E  YTGTGFPGYG GAR        T  QG EL R FM+ Y++YRHYFPLMALGRARE+L
Sbjct:  233 DRLACLYQKLPVQPRREAAIKLCLEWIIERQEADGCWGGIQPPWVYSLMALNVEGYAVDHPVVAKGLDAFGHPWSYERDGGLYVQACMSPVWDTVLALLALADCGEDCRSLPAVQRAVHWVLEEQIRTPGDWRVYARGIRPGGWAFEFENDTYPDVDDSAVALLVLARLRDSSPDRNTVDEAIERGLEWVLGMRCRNGAWAAFDKDNTNALVARIPFCDFGEALDPPSVDVTAHVVEALGHLGRDLSDPVVSRAVDYIQAQQELDGSWFGRWGVNHIYGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETCASYMDTSLRGVGVSTASQTAWALMALLAVGSRRYDEAIRRGADYLVLNQREDGTWDEPEYTGTGFPGYGCGARVDLSRPGTTLPQGKELGRAFMINYNLYRHYFPLMALGRAREHL 668          
BLAST of mRNA_P-wetherbeei_contig17901.1.1 vs. uniprot
Match: A0A7T5CGV2_9BACT (Squalene--hopene cyclase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7T5CGV2_9BACT)

HSP 1 Score: 512 bits (1318), Expect = 5.250e-174
Identity = 246/436 (56.42%), Postives = 305/436 (69.95%), Query Frame = 1
Query:    1 VADRMLTLYQRSPFKPGRELAIKVCMEWIAARQENDGCWAGIQPPWIYAIMALSAEGYSLKHPMIKAGLDAFNHPWGHEEERGTFMQACTSPVWDTLLTQLAMLDCGLDCSNADFQK-SLDWILDEQIVVDGDWKYKVPNAQCGGWCFEYENDTYPDIDDTAVAMIVLARSLKSAKDPS--RVHYALRRATDWVTAMVCSNGAWAAFDKDNTIDLIRRIPFSDFGEALDPPSVDVTAHVVEAFGWMGRDL-SDPLVARAVDYIRREQEPEGSWFGRWGVNHIYGTGAVIPALEKVGENMQADYIVKXXXXXXXXQNADGGWGESCGSYMDDSLRGRGESTASQTGWALMALLAQGTQRYRASIENGVDFLRRTQTSEGSWNEEYYTGTGFPGYGGGARRGNLEDI--KTQGLELSRGFMLRYHMYRHYFPLMALGR 1290
            +AD+ L +Y +SP KP RELAIK CMEWI   Q+ DG W GIQPPWIY++MA+  EGY+L    +K+GL+AFN  W  E E GTF+QA  S +WDT+L+ LAMLDCGLD    +  K ++DW+L ++I + GDW   + N + GGW FE  N  YPD+DDTAVA++VL ++ K   D +  R+  A+ RA  WV AM C NG W AFDKDN   L+ +IPF DFGE LDPPSVDVT HV+EA   +G    +DP + +AVDY++ EQE EGSWFGRWGVNHIYG GAV+PAL   GE+M + Y++K        QN DGGWGE+C SYMDD LRG+G STASQTGWALM L A   +RY  SI  GV +L RTQ  +G+W E YYTGTGFPGYG G R    + +    QG EL+RGFM+ Y+MYRHYFPLMA+GR
Sbjct:  238 LADKFLNVYVKSPVKPMRELAIKTCMEWILKHQDWDGAWGGIQPPWIYSLMAMRCEGYALDQMNVKSGLEAFNTHWKIEREDGTFLQASDSIIWDTVLSLLAMLDCGLDAGKEESMKRAIDWVLSKEITIKGDWSVVLKNVEPGGWAFERANQLYPDVDDTAVAILVLVKAKKYVDDVTKRRIDDAVARAELWVRAMQCKNGGWGAFDKDNCKALVTKIPFCDFGEVLDPPSVDVTCHVIEALTELGHTQENDPALKKAVDYVKLEQEEEGSWFGRWGVNHIYGCGAVLPALRAAGEDMSSTYVIKSGDWIVAHQNKDGGWGETCASYMDDELRGKGPSTASQTGWALMTLEAIDAERYGNSIREGVQYLLRTQ-GDGTWYEPYYTGTGFPGYGIGERTDVTKQMGFMDQGKELARGFMINYNMYRHYFPLMAMGR 672          
BLAST of mRNA_P-wetherbeei_contig17901.1.1 vs. uniprot
Match: A0A3M1IN80_9BACT (Squalene--hopene cyclase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3M1IN80_9BACT)

HSP 1 Score: 511 bits (1317), Expect = 6.770e-174
Identity = 243/443 (54.85%), Postives = 310/443 (69.98%), Query Frame = 1
Query:    1 VADRMLTLYQRSPFKPGRELAIKVCMEWIAARQENDGCWAGIQPPWIYAIMALSAEGYSLKHPMIKAGLDAFNHPWGHEEERGTFMQACTSPVWDTLLTQLAMLDCGLDCSN-ADFQKSLDWILDEQIVVDGDWKYKVPNAQCGGWCFEYENDTYPDIDDTAVAMIVLARSLKSAKDP--SRVHYALRRATDWVTAMVCSNGAWAAFDKDNTIDLIRRIPFSDFGEALDPPSVDVTAHVVEAFGWMGRDLSDPLVARAVDYIRREQEPEGSWFGRWGVNHIYGTGAVIPALEKVGENMQADYIVKXXXXXXXXQNADGGWGESCGSYMDDSLRGRGESTASQTGWALMALLAQGTQRYRASIENGVDFLRRTQTSEGSWNEEYYTGTGFPGYGGGAR---RGNLEDIKTQGLELSRGFMLRYHMYRHYFPLMALGRAREYLAK 1311
            V +++L  YQRSP++PGRE AIK+C+EWI   Q+ DG W GIQPP +Y++MAL+ EGY + HP+++ GLDA+NH W H E    ++QA  SP+WDT+L+ + ++D G         +++++W+LD+QI+  GDW  +VP  +CGGW FE  N  YPD+DDTAVAMIVL R L SA      R+ +AL+RA  WV AM  +NG W AFDKDNT  ++ +IPFSDFGE LDPPS D+T H +EA G MG  L DP V RAVDYI REQEP GSWFGRWGVN IYGT  V+P L  VG +M+   I+K        QN DGGWGESCGSYM+++L G+G +T SQT WALMALLA     +  +I  GV++L R Q  +G+W++E+YTGTGFPGYG G R   + NL  +  QG EL+RGFML Y MYRHYFPL AL RAREY  +
Sbjct:  225 VIEKLLHYYQRSPWQPGREAAIKLCLEWILRHQDPDGAWGGIQPPTVYSLMALNVEGYPVDHPVLQVGLDAWNHHWSHREGDAIYIQASESPIWDTVLSLVGLIDSGETFDTFPGMRRAVEWLLDKQILTPGDWAVRVPGVECGGWAFERANRLYPDVDDTAVAMIVLQRLLPSAPADLRPRMEWALQRAETWVRAMQSANGGWGAFDKDNTHMILTQIPFSDFGEILDPPSADLTGHKLEALGCMGHSLEDPAVRRAVDYILREQEPNGSWFGRWGVNFIYGTAMVLPGLRAVGFDMKDPRILKAGRWLVSCQNEDGGWGESCGSYMEETLHGKGPTTPSQTAWALMALLAIDDPEFDEAIRGGVEWLLRHQRPDGTWDQEHYTGTGFPGYGIGERIRHKNNLA-VLAQGCELARGFMLNYTMYRHYFPLQALARAREYFRR 666          
BLAST of mRNA_P-wetherbeei_contig17901.1.1 vs. uniprot
Match: A0A3N5Q990_9GAMM (Squalene--hopene cyclase (Fragment) n=2 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5Q990_9GAMM)

HSP 1 Score: 507 bits (1305), Expect = 3.130e-173
Identity = 249/439 (56.72%), Postives = 299/439 (68.11%), Query Frame = 1
Query:    4 ADRMLTLYQRSPFKPGRELAIKVCMEWIAARQENDGCWAGIQPPWIYAIMALSAEGYSLKHPMIKAGLDAFNHPWGHEEERGTFMQACTSPVWDTLLTQLAMLDCGLDCSNADFQKSLDWILDEQIVVDGDWKYKVPNAQCGGWCFEYENDTYPDIDDTAVAMIVLARSLKSAKDPSRVHYALRRATDWVTAMVCSNGAWAAFDKDNTIDLIRRIPFSDFGEALDPPSVDVTAHVVEAFGWMGRDLSDPLVARAVDYIRREQEPEGSWFGRWGVNHIYGTGAVIPALEKVGENMQADYIVKXXXXXXXXQNADGGWGESCGSYMDDSLRGRGESTASQTGWALMALLAQGTQRYRASIENGVDFLRRTQTSEGSWNEEYYTGTGFPGYGGGARRGNLEDIKT-----QGLELSRGFMLRYHMYRHYFPLMALGRAREYL 1305
            +DR+L LYQ+  F P RE AI  C+ WI   Q+ DG W GIQPPWIY++MAL+ EGY L HP+I  GL A +  W +E      +QA  SPVWDTLL  LAM DC  + + A   ++LDW+L  ++   GDW  KV N +  GW FE  N  YPDIDDTAVA+IVL+R  +   D  R+   + RA  W  AM  SNG WAAFDKDN   +I +IPF DFGEALDPPS DVTAHV+EA G +G D   P VAR   +IR EQE +GSWFGRWGVNHIYGT AV+PAL  +GE+M   Y+          QN +GGWGE+C SYMDDSLRGRG STASQTGWAL+AL+A G++ Y  SI  GV FL  +Q  +G+WNE YYTGTGFPGYG GAR  +  D KT     QG EL RGFM+ Y++YRHYFPLMALGRAR++L
Sbjct:  156 SDRILHLYQQLGFTPFRETAINACLGWIVRHQDADGAWGGIQPPWIYSLMALNVEGYELTHPVISKGLTALDSHWSYERGGTLHIQASESPVWDTLLALLAMQDCEREFTPA-MTRALDWVLANEVRYPGDWTKKVKNVEPSGWAFERANLHYPDIDDTAVALIVLSRLPRQLLDEPRIRATIDRALAWTLAMQSSNGGWAAFDKDNDRPIITKIPFCDFGEALDPPSADVTAHVLEALGLLGFDRHHPAVARGYRFIRSEQETDGSWFGRWGVNHIYGTAAVLPALAAIGEDMTQAYVRAAADWLVAHQNTEGGWGETCASYMDDSLRGRGPSTASQTGWALLALVATGSRDYERSIRRGVGFLIDSQRDDGTWNEPYYTGTGFPGYGFGARM-DFRDQKTRERIAQGTELQRGFMINYNLYRHYFPLMALGRARKFL 592          
BLAST of mRNA_P-wetherbeei_contig17901.1.1 vs. uniprot
Match: UPI00054FC584 (squalene--hopene cyclase n=1 Tax=Desulfatirhabdium butyrativorans TaxID=340467 RepID=UPI00054FC584)

HSP 1 Score: 506 bits (1303), Expect = 7.520e-172
Identity = 247/440 (56.14%), Postives = 301/440 (68.41%), Query Frame = 1
Query:    1 VADRMLTLYQRSPFKPGRELAIKVCMEWIAARQENDGCWAGIQPPWIYAIMALSAEGYSLKHPMIKAGLDAFNHPWGHEEERGTFMQACTSPVWDTLLTQLAMLDCGLDCSNA-DFQKSLDWILDEQIVVDGDWKYKVPNAQCGGWCFEYENDTYPDIDDTAVAMIVLARSLKSAKDPSRVHYALRRATDWVTAMVCSNGAWAAFDKDNTIDLIRRIPFSDFGEALDPPSVDVTAHVVEAFGWMGRDLSDPLVARAVDYIRREQEPEGSWFGRWGVNHIYGTGAVIPALEKVGENMQADYIVKXXXXXXXXQNADGGWGESCGSYMDDSLRGRGESTASQTGWALMALLAQGTQRYRASIENGVDFLRRTQTSEGSWNEEYYTGTGFPGYGGGAR----RGNLEDIKTQGLELSRGFMLRYHMYRHYFPLMALGRAREYL 1305
            + DR L   QR  F P R+ A + C+ WI A Q+ DG W GIQPPWIY++MAL AEGY L HP+I+ GLDA N  W  E++    +QA  SPVWDTLL  +AMLDCG DC+++   QK+L+W+L  QI   GDW+ K+   +  GW FE  N  YPD+DDTAVA+IVL R  ++  D  R+  A+ RA  WV AM C NG W AFDKDN   L+ +IPFSDFGE LDPPSVDVT HV+EA G +G + S P + +A+ +I  EQE EG WFGRWGVN+IYGT AV+  L+ +GE+MQA Y+ K        QN DGGWGESCGSYM  +LRG+GESTASQ+GWALMAL+A   +RY  S+  GV FL  +Q + GSW+E  YTGTGFPGYG G R       L +   QG EL RGFML Y+MYRHYFPLMALGRA  YL
Sbjct:  231 INDRFLHFLQRIGFTPFRKAAFRKCVRWIVAHQDADGSWGGIQPPWIYSLMALHAEGYPLTHPVIRKGLDALNQHWSFEKKGSLHVQASESPVWDTLLALMAMLDCGCDCNDSLAMQKALEWVLAHQIRSPGDWQVKIKGVEPSGWAFERANAWYPDVDDTAVALIVLGRIRQAHPDRRRIDAAIDRAARWVLAMQCRNGGWGAFDKDNDRILLTKIPFSDFGEVLDPPSVDVTGHVIEALGTIGMNRSHPAIRKALAFIWNEQEAEGCWFGRWGVNYIYGTSAVLCGLKAIGEDMQAGYVKKAAEWIASCQNPDGGWGESCGSYMVPALRGKGESTASQSGWALMALVATDDRRYSESVRRGVAFLVDSQQA-GSWDEPQYTGTGFPGYGEGQRIDLSSDGLSEKLCQGAELGRGFMLNYNMYRHYFPLMALGRAMSYL 669          
BLAST of mRNA_P-wetherbeei_contig17901.1.1 vs. uniprot
Match: A0A517YPS4_9BACT (Squalene--hopene cyclase n=1 Tax=Poriferisphaera corsica TaxID=2528020 RepID=A0A517YPS4_9BACT)

HSP 1 Score: 504 bits (1299), Expect = 5.330e-171
Identity = 250/444 (56.31%), Postives = 311/444 (70.05%), Query Frame = 1
Query:    4 ADRMLTLYQRSPFKPGRELAIKVCMEWIAARQENDGCWAGIQPPWIYAIMALSAEGYSLKHPMIKAGLDAFNHPWGHEEERGTFMQACTSPVWDTLLTQLAMLDCGLDCSNAD-FQKSLDWILDEQIVVDGDWKYKVPNAQCGGWCFEYENDTYPDIDDTAVAMIVLARSLKSAKDPS---RVHYALRRATDWVTAMVCSNGAWAAFDKDNTIDLIRRIPFSDFGEALDPPSVDVTAHVVEAFGWMGRDL-SDPLVARAVDYIRREQEPEGSWFGRWGVNHIYGTGAVIPALEKVGENMQADYIVKXXXXXXXXQNADGGWGESCGSYMDDSLRGRGESTASQTGWALMALLA-----QGTQRYRASIENGVDFLRRTQTSEGSWNEEYYTGTGFPGYGGGARRGNLEDIKT--QGLELSRGFMLRYHMYRHYFPLMALGRARE 1299
            AD++L LY +SP KP RELAIK CMEWI   Q+ DG W GIQPPWIY++MA+  EGYSL  P +K GL+AFN  W  E E G F+QA  S +WDT+L+ LAMLDC +  S+++  Q++++WIL ++I V GDW   + + + GGW FE  N  YPDIDDTAV M+VL + +K + D     R+  A+ RA  WV AM C NG W AFDKDN   L+ +IPF DFGE LDPPSVDVT HV+EA   +G    +DP +  A+DY++ EQE EGSWFGRWGVNHIYGT AV+PAL   GE+M ++Y++K        QN DGGWGESC SYMDDSLRG G STASQTGWALM L +     +   +YR SI+ GVD+L RTQ + G+W+E YYTGTGFPGYG G R    +   T  QG EL+RGFM+ Y+MYRHYFPLMA+GR R+
Sbjct:  245 ADKVLNLYIKSPIKPFRELAIKTCMEWILKHQDWDGAWGGIQPPWIYSLMAMRCEGYSLDQPNVKLGLEAFNTHWKIEREDGVFLQASDSIIWDTVLSMLAMLDCEIKPSDSESIQRAMEWILSKEIRVKGDWSVVLKDVEPGGWAFERANQLYPDIDDTAVVMLVLTK-MKGSVDKETNRRIEDAVARAEVWVRAMQCKNGGWGAFDKDNCKPLVTKIPFCDFGEVLDPPSVDVTCHVIEALTELGHTQENDPALKAAMDYVKSEQEAEGSWFGRWGVNHIYGTAAVLPALRAAGEDMGSEYVLKAGSWIIEHQNEDGGWGESCASYMDDSLRGTGPSTASQTGWALMCLESITPNLETAAQYRNSIQLGVDYLLRTQEA-GTWDEPYYTGTGFPGYGIGERTDVQKQGGTLDQGRELARGFMINYNMYRHYFPLMAMGRLRK 686          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17901.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9PU89_9BACT7.800e-21567.27Squalene--hopene cyclase n=1 Tax=Phycisphaerales b... [more]
A0A7X8XLL8_9BURK1.180e-18660.45Squalene--hopene cyclase n=1 Tax=Burkholderiales b... [more]
A0A7C7RJV1_9BACT3.070e-18058.08Squalene--hopene cyclase n=1 Tax=Thermodesulfobact... [more]
A0A355TSS1_9BACT1.850e-17956.04Squalene--hopene cyclase n=1 Tax=bacterium UBP9_UB... [more]
A0A7Y5Q4Q0_9BACT6.860e-17758.72Squalene--hopene cyclase n=1 Tax=Armatimonadetes b... [more]
A0A7T5CGV2_9BACT5.250e-17456.42Squalene--hopene cyclase n=1 Tax=Planctomycetes ba... [more]
A0A3M1IN80_9BACT6.770e-17454.85Squalene--hopene cyclase n=1 Tax=Verrucomicrobia b... [more]
A0A3N5Q990_9GAMM3.130e-17356.72Squalene--hopene cyclase (Fragment) n=2 Tax=Xantho... [more]
UPI00054FC5847.520e-17256.14squalene--hopene cyclase n=1 Tax=Desulfatirhabdium... [more]
A0A517YPS4_9BACT5.330e-17156.31Squalene--hopene cyclase n=1 Tax=Poriferisphaera c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17901contigP-wetherbeei_contig17901:80..1393 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1056820.KB900631_gene2374
Preferred nameshc
PFAMsSQHop_cyclase_C,SQHop_cyclase_N
Model size1314
Max annot lvl1236|Gammaproteobacteria
KEGG rclassRC01850,RC01851
KEGG koko:K06045
KEGG ReactionR07322,R07323
KEGG Pathwayko00909,ko01110,map00909,map01110
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.04e-170
EggNOG OGsCOG1657@1|root,COG1657@2|Bacteria,1MUIP@1224|Proteobacteria,1S118@1236|Gammaproteobacteria,2PQ8D@256005|Alteromonadales genera incertae sedis
EC4.2.1.129,5.4.99.17
DescriptionSqualene-hopene cyclase C-terminal domain
Cds size1302
COG categoryI
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186130.5883667-CDS-P-wetherbeei_contig17901:79..13811683186130.5883667-CDS-P-wetherbeei_contig17901:79..1381Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17901 80..1381 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186130.6020017-UTR-P-wetherbeei_contig17901:1381..13931683186130.6020017-UTR-P-wetherbeei_contig17901:1381..1393Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17901 1382..1393 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17901.1.1prot_P-wetherbeei_contig17901.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17901 80..1381 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17901.1.1

>prot_P-wetherbeei_contig17901.1.1 ID=prot_P-wetherbeei_contig17901.1.1|Name=mRNA_P-wetherbeei_contig17901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=434bp
MLTLYQRSPFKPGRELAIKVCMEWIAARQENDGCWAGIQPPWIYAIMALS
AEGYSLKHPMIKAGLDAFNHPWGHEEERGTFMQACTSPVWDTLLTQLAML
DCGLDCSNADFQKSLDWILDEQIVVDGDWKYKVPNAQCGGWCFEYENDTY
PDIDDTAVAMIVLARSLKSAKDPSRVHYALRRATDWVTAMVCSNGAWAAF
DKDNTIDLIRRIPFSDFGEALDPPSVDVTAHVVEAFGWMGRDLSDPLVAR
AVDYIRREQEPEGSWFGRWGVNHIYGTGAVIPALEKVGENMQADYIVKAC
DWIVAHQNADGGWGESCGSYMDDSLRGRGESTASQTGWALMALLAQGTQR
YRASIENGVDFLRRTQTSEGSWNEEYYTGTGFPGYGGGARRGNLEDIKTQ
GLELSRGFMLRYHMYRHYFPLMALGRAREYLAK*
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mRNA from alignment at P-wetherbeei_contig17901:80..1393-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17901.1.1 ID=mRNA_P-wetherbeei_contig17901.1.1|Name=mRNA_P-wetherbeei_contig17901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1314bp|location=Sequence derived from alignment at P-wetherbeei_contig17901:80..1393- (Phaeothamnion wetherbeei SAG_119_79)
GTGGCAGACCGAATGCTCACACTCTACCAGCGTTCGCCTTTCAAGCCCGG CCGTGAGCTTGCTATCAAGGTTTGCATGGAATGGATCGCCGCACGCCAGG AAAACGACGGCTGCTGGGCCGGCATCCAGCCTCCCTGGATTTATGCAATT ATGGCGCTCAGCGCTGAAGGCTACTCTCTCAAGCACCCGATGATCAAGGC CGGCCTCGACGCCTTCAATCATCCCTGGGGCCACGAAGAGGAGCGAGGAA CTTTCATGCAGGCCTGCACCTCGCCGGTTTGGGATACCCTGCTGACGCAG CTGGCCATGCTCGACTGCGGCCTCGACTGTTCCAACGCTGACTTCCAGAA ATCGCTGGACTGGATCCTCGACGAGCAAATCGTCGTCGACGGAGACTGGA AATATAAGGTTCCCAACGCGCAATGTGGCGGTTGGTGCTTCGAATACGAA AACGACACCTACCCCGACATCGATGACACTGCCGTGGCGATGATCGTGCT CGCCCGCAGCTTAAAATCCGCCAAAGATCCTTCGCGGGTGCACTACGCTC TGCGCCGTGCCACCGACTGGGTGACTGCGATGGTCTGCAGCAACGGCGCG TGGGCGGCCTTCGATAAGGACAACACCATCGACTTGATCCGTCGCATCCC GTTCTCGGATTTTGGCGAGGCGCTCGACCCGCCCAGCGTCGACGTGACCG CTCACGTCGTCGAAGCCTTCGGTTGGATGGGTCGCGATCTGAGCGATCCT CTGGTGGCTCGGGCCGTGGATTACATCCGCCGCGAGCAAGAGCCTGAGGG TAGCTGGTTCGGGCGCTGGGGCGTCAATCATATCTACGGCACCGGCGCCG TCATCCCCGCCCTCGAGAAGGTCGGCGAGAATATGCAAGCCGACTACATT GTCAAAGCCTGCGATTGGATTGTCGCCCACCAGAATGCCGATGGCGGCTG GGGCGAGAGCTGCGGCTCCTATATGGACGACAGCTTGCGCGGCCGGGGCG AGAGCACCGCCTCGCAGACCGGTTGGGCTCTGATGGCTCTGCTGGCTCAA GGCACCCAGAGATACCGCGCTTCCATCGAGAACGGCGTGGACTTCCTGCG CCGCACCCAGACCTCCGAGGGGAGCTGGAACGAAGAGTATTACACGGGGA CGGGCTTCCCCGGCTACGGTGGCGGCGCCCGGCGCGGCAATCTCGAAGAC ATCAAAACACAGGGCCTCGAGCTCAGCCGCGGCTTCATGCTGCGCTACCA TATGTATCGCCACTATTTCCCTCTTATGGCTCTAGGTCGCGCTCGGGAGT ATCTGGCCAAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17901:80..1393-

>mRNA_P-wetherbeei_contig17901.1.1 ID=mRNA_P-wetherbeei_contig17901.1.1|Name=mRNA_P-wetherbeei_contig17901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1302bp|location=Sequence derived from alignment at P-wetherbeei_contig17901:80..1393- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCACACTCTACCAGCGTTCGCCTTTCAAGCCCGGCCGTGAGCTTGC
TATCAAGGTTTGCATGGAATGGATCGCCGCACGCCAGGAAAACGACGGCT
GCTGGGCCGGCATCCAGCCTCCCTGGATTTATGCAATTATGGCGCTCAGC
GCTGAAGGCTACTCTCTCAAGCACCCGATGATCAAGGCCGGCCTCGACGC
CTTCAATCATCCCTGGGGCCACGAAGAGGAGCGAGGAACTTTCATGCAGG
CCTGCACCTCGCCGGTTTGGGATACCCTGCTGACGCAGCTGGCCATGCTC
GACTGCGGCCTCGACTGTTCCAACGCTGACTTCCAGAAATCGCTGGACTG
GATCCTCGACGAGCAAATCGTCGTCGACGGAGACTGGAAATATAAGGTTC
CCAACGCGCAATGTGGCGGTTGGTGCTTCGAATACGAAAACGACACCTAC
CCCGACATCGATGACACTGCCGTGGCGATGATCGTGCTCGCCCGCAGCTT
AAAATCCGCCAAAGATCCTTCGCGGGTGCACTACGCTCTGCGCCGTGCCA
CCGACTGGGTGACTGCGATGGTCTGCAGCAACGGCGCGTGGGCGGCCTTC
GATAAGGACAACACCATCGACTTGATCCGTCGCATCCCGTTCTCGGATTT
TGGCGAGGCGCTCGACCCGCCCAGCGTCGACGTGACCGCTCACGTCGTCG
AAGCCTTCGGTTGGATGGGTCGCGATCTGAGCGATCCTCTGGTGGCTCGG
GCCGTGGATTACATCCGCCGCGAGCAAGAGCCTGAGGGTAGCTGGTTCGG
GCGCTGGGGCGTCAATCATATCTACGGCACCGGCGCCGTCATCCCCGCCC
TCGAGAAGGTCGGCGAGAATATGCAAGCCGACTACATTGTCAAAGCCTGC
GATTGGATTGTCGCCCACCAGAATGCCGATGGCGGCTGGGGCGAGAGCTG
CGGCTCCTATATGGACGACAGCTTGCGCGGCCGGGGCGAGAGCACCGCCT
CGCAGACCGGTTGGGCTCTGATGGCTCTGCTGGCTCAAGGCACCCAGAGA
TACCGCGCTTCCATCGAGAACGGCGTGGACTTCCTGCGCCGCACCCAGAC
CTCCGAGGGGAGCTGGAACGAAGAGTATTACACGGGGACGGGCTTCCCCG
GCTACGGTGGCGGCGCCCGGCGCGGCAATCTCGAAGACATCAAAACACAG
GGCCTCGAGCTCAGCCGCGGCTTCATGCTGCGCTACCATATGTATCGCCA
CTATTTCCCTCTTATGGCTCTAGGTCGCGCTCGGGAGTATCTGGCCAAGT
AG
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