mRNA_P-wetherbeei_contig17549.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17549.1.1
Unique NamemRNA_P-wetherbeei_contig17549.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig17549.1.1 vs. uniprot
Match: A0A7S2TLP3_9EUKA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TLP3_9EUKA)

HSP 1 Score: 58.9 bits (141), Expect = 1.270e-8
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 1 
Query:   37 WVSEADIVFVSSILFSTGMMIALTDRWRRLKRGARVMTLRP--ISDLLLLHDGFFEMSWGHARVHIYRRQ 240
            W   AD+V+ SSI F + +  +L +++R +K+GARV+TL+   I DL L+    ++MSWG   V++  R+
Sbjct:  148 WWEVADVVYTSSICFESSLYRSLGEKFRLMKKGARVITLKMDNIRDLTLISQKSYKMSWGRCTVYVLERR 217
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BLAST of mRNA_P-wetherbeei_contig17549.1.1 vs. uniprot
Match: A0A078AUX2_STYLE (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AUX2_STYLE)

HSP 1 Score: 55.8 bits (133), Expect = 3.340e-7
Identity = 30/79 (37.97%), Postives = 49/79 (62.03%), Query Frame = 1 
Query:   10 GDMFAAEDNWVSEADIVFVSSILFSTGMMIALTDRWRRLKRGARVMTLRPISD---LLLLHDGFFEMSWGHARVHIYRR 237
            GDM   +  W S+ADI++ SSI F   ++  + D+ R+LK+GAR++TL+   D   L + +    +MSWG  +V +YR+
Sbjct:  498 GDMLQID--W-SDADIIYASSICFPDELVEGICDQARKLKKGARILTLKSFPDRDYLRMEYSLKIKMSWGRCQVAMYRK 573
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BLAST of mRNA_P-wetherbeei_contig17549.1.1 vs. uniprot
Match: A0A7S2UVX2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVX2_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 4.720e-7
Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 1 
Query:   10 GDMFAAEDNWVSEADIVFVSSILFSTGMMIALTDRWRRLKRGARVMTLRPISD----LLLLHDGFFEMSWGHARVHIYRR 237
            GDM   + +W S+AD+V+ SSI F+  +M  L++  RRLK GAR MTL+ + +      +    +++MSWG   V++  R
Sbjct:   60 GDML--QWDW-SDADVVYTSSICFADELMAELSELARRLKPGARFMTLKVLPNYEGYFFIKSQEWYKMSWGRINVYVMER 136
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17549.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S2TLP3_9EUKA1.270e-838.57Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A078AUX2_STYLE3.340e-737.97Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2UVX2_9STRA4.720e-737.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17549contigP-wetherbeei_contig17549:877..1212 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009032488.1
PFAMsDOT1
Model size243
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue0.000377
EggNOG OGs2BR00@1|root,2S3F7@2759|Eukaryota
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-16_000810.1
DescriptionHistone methylation protein DOT1
Cds size228
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186119.6335897-CDS-P-wetherbeei_contig17549:876..9511683186119.6335897-CDS-P-wetherbeei_contig17549:876..951Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17549 877..951 -
1683186119.6428263-CDS-P-wetherbeei_contig17549:1044..11971683186119.6428263-CDS-P-wetherbeei_contig17549:1044..1197Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17549 1045..1197 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186119.6504335-UTR-P-wetherbeei_contig17549:1197..12121683186119.6504335-UTR-P-wetherbeei_contig17549:1197..1212Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17549 1198..1212 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17549.1.1prot_P-wetherbeei_contig17549.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17549 877..1197 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17549.1.1

>prot_P-wetherbeei_contig17549.1.1 ID=prot_P-wetherbeei_contig17549.1.1|Name=mRNA_P-wetherbeei_contig17549.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=76bp
MFAAEDNWVSEADIVFVSSILFSTGMMIALTDRWRRLKRGARVMTLRPIS
DLLLLHDGFFEMSWGHARVHIYRRQ*
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mRNA from alignment at P-wetherbeei_contig17549:877..1212-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17549.1.1 ID=mRNA_P-wetherbeei_contig17549.1.1|Name=mRNA_P-wetherbeei_contig17549.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=336bp|location=Sequence derived from alignment at P-wetherbeei_contig17549:877..1212- (Phaeothamnion wetherbeei SAG_119_79)
TTTACCACCGGAGACATGTTTGCGGCGGAGGACAATTGGGTGTCTGAAGC
GGACATTGTCTTTGTCTCCTCGATTCTCTTTTCCACCGGTATGATGATTG
CGCTGACGGACCGCTGGCGCCGTCTAAAGCGCGGGGCCCGGGTTATGACG
CTGCGACCCATCAGCGATGTTGCGTCTAAGACGTGGCCGGTCACAGCGAG
CTCGGGAACGGTTGCGGCTGGGGCAGGAGGCGTGGCGCGGACGGGAGTGG
CTCCGCCGGAGCTTCTTTTGCTGCATGATGGCTTCTTTGAGATGAGTTGG
GGCCACGCACGGGTTCATATTTATAGGCGGCAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17549:877..1212-

>mRNA_P-wetherbeei_contig17549.1.1 ID=mRNA_P-wetherbeei_contig17549.1.1|Name=mRNA_P-wetherbeei_contig17549.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=228bp|location=Sequence derived from alignment at P-wetherbeei_contig17549:877..1212- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTTGCGGCGGAGGACAATTGGGTGTCTGAAGCGGACATTGTCTTTGT
CTCCTCGATTCTCTTTTCCACCGGTATGATGATTGCGCTGACGGACCGCT
GGCGCCGTCTAAAGCGCGGGGCCCGGGTTATGACGCTGCGACCCATCAGC
GATCTTCTTTTGCTGCATGATGGCTTCTTTGAGATGAGTTGGGGCCACGC
ACGGGTTCATATTTATAGGCGGCAATGA
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