mRNA_P-wetherbeei_contig17451.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17451.1.1
Unique NamemRNA_P-wetherbeei_contig17451.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17451.1.1 vs. uniprot
Match: A0A7C4TTU2_9HYPH (MaoC family dehydratase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TTU2_9HYPH)

HSP 1 Score: 229 bits (583), Expect = 4.720e-75
Identity = 115/143 (80.42%), Postives = 125/143 (87.41%), Query Frame = 1
Query:    7 MTIMQRKTYCFEDLEPGMEASCQKTVSEADIVAYADVSGDKNPVHLDEDYAKRTPFKTRIAHGMLTASYISAVFGMEMPGPGAIYVSQTLNFKAPVRIGDVVTAKVKLLELYPTKRRARFECVCLVGGKPVLEGEAVLMVPGR 435
            MT+  RKTY FEDLE GMEAS +KTVSEADIVA+A+V+GDKNPVHLD  YA +T FK  IAHGMLTASYISAVFGMEMPGPG IYVSQTLNF+APVRIGD VTAKVK++EL+P KRR RFE VCLV GKPVLEGEAVLMVP R
Sbjct:    1 MTLTVRKTYYFEDLEVGMEASFRKTVSEADIVAFANVTGDKNPVHLDGAYAAKTMFKEPIAHGMLTASYISAVFGMEMPGPGVIYVSQTLNFRAPVRIGDTVTAKVKVVELFPVKRRVRFETVCLVAGKPVLEGEAVLMVPAR 143          
BLAST of mRNA_P-wetherbeei_contig17451.1.1 vs. uniprot
Match: A0A1Q3JZ94_9PROT (Acyl dehydratase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Q3JZ94_9PROT)

HSP 1 Score: 227 bits (579), Expect = 1.920e-74
Identity = 110/143 (76.92%), Postives = 123/143 (86.01%), Query Frame = 1
Query:    7 MTIMQRKTYCFEDLEPGMEASCQKTVSEADIVAYADVSGDKNPVHLDEDYAKRTPFKTRIAHGMLTASYISAVFGMEMPGPGAIYVSQTLNFKAPVRIGDVVTAKVKLLELYPTKRRARFECVCLVGGKPVLEGEAVLMVPGR 435
            MTIM RK+Y FEDLEPGMEAS  KTV E DI+ +A+V+GDKNPVHLD D+A RT FK RIAHGMLTASYISAVFGME+PGPG IY+SQTLNFKAPVRIGD V AKVK+ EL+P KRRARF+CVC V GK VL+GEA+LMVP R
Sbjct:    1 MTIMTRKSYYFEDLEPGMEASFAKTVIETDIIGFAEVTGDKNPVHLDTDFAARTMFKERIAHGMLTASYISAVFGMELPGPGVIYISQTLNFKAPVRIGDEVVAKVKVAELFPAKRRARFDCVCTVDGKTVLDGEAILMVPAR 143          
BLAST of mRNA_P-wetherbeei_contig17451.1.1 vs. uniprot
Match: A0A6N6SXD6_9HYPH (MaoC family dehydratase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SXD6_9HYPH)

HSP 1 Score: 215 bits (547), Expect = 1.540e-69
Identity = 107/143 (74.83%), Postives = 121/143 (84.62%), Query Frame = 1
Query:    7 MTIMQRKTYCFEDLEPGMEASCQKTVSEADIVAYADVSGDKNPVHLDEDYAKRTPFKTRIAHGMLTASYISAVFGMEMPGPGAIYVSQTLNFKAPVRIGDVVTAKVKLLELYPTKRRARFECVCLVGGKPVLEGEAVLMVPGR 435
            MT + R+ Y FEDLE GMEAS  KTV+EADIV++A+V+GDKNPVHLD  YA +T FK  IAHGMLTA YISAVFGMEMPGPGAIYVSQTLNF+APV+ GD V AKV+++ELYP KRRARFEC C+V G  VLEGEAVLMVPGR
Sbjct:    1 MTAIMRQAYHFEDLEVGMEASFAKTVTEADIVSFAEVTGDKNPVHLDAVYAAKTIFKEPIAHGMLTAGYISAVFGMEMPGPGAIYVSQTLNFRAPVKKGDRVVAKVRVMELYPAKRRARFECTCVVDGTMVLEGEAVLMVPGR 143          
BLAST of mRNA_P-wetherbeei_contig17451.1.1 vs. uniprot
Match: A0A0D6JAF9_9HYPH ((R)-specific enoyl-CoA hydratase (Modular protein) n=3 Tax=Filomicrobium TaxID=119044 RepID=A0A0D6JAF9_9HYPH)

HSP 1 Score: 216 bits (549), Expect = 2.190e-69
Identity = 105/145 (72.41%), Postives = 123/145 (84.83%), Query Frame = 1
Query:    1 AEMTIMQRKTYCFEDLEPGMEASCQKTVSEADIVAYADVSGDKNPVHLDEDYAKRTPFKTRIAHGMLTASYISAVFGMEMPGPGAIYVSQTLNFKAPVRIGDVVTAKVKLLELYPTKRRARFECVCLVGGKPVLEGEAVLMVPGR 435
            A MT++ RK Y FEDLE GMEA+ +KTV EADI A+A+VSGD+NPVHLD +YA  T FK  IAHG+LTASYIS VFGMEMPGPGAIYVSQTLNFKAPVRIGD VTAKV +++L P+K+RARF+C C V GK VL+GEA++MVPGR
Sbjct:   33 ALMTVVTRKAYYFEDLELGMEATFEKTVQEADIAAFAEVSGDRNPVHLDREYAATTIFKEPIAHGLLTASYISTVFGMEMPGPGAIYVSQTLNFKAPVRIGDTVTAKVVVVDLVPSKKRARFDCTCSVNGKVVLDGEAMMMVPGR 177          
BLAST of mRNA_P-wetherbeei_contig17451.1.1 vs. uniprot
Match: A0A537RBU8_9PROT (MaoC family dehydratase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RBU8_9PROT)

HSP 1 Score: 214 bits (544), Expect = 4.870e-69
Identity = 104/143 (72.73%), Postives = 120/143 (83.92%), Query Frame = 1
Query:    7 MTIMQRKTYCFEDLEPGMEASCQKTVSEADIVAYADVSGDKNPVHLDEDYAKRTPFKTRIAHGMLTASYISAVFGMEMPGPGAIYVSQTLNFKAPVRIGDVVTAKVKLLELYPTKRRARFECVCLVGGKPVLEGEAVLMVPGR 435
            M ++ R+ Y FEDLE GMEAS  KTVSEADI+A+A+V+GDKNPVHLD  YA +T FK  IAHGMLTA YIS VFGME+PGPGAIYVSQTLNF+ PV++GD V AKV+++ELYP KRRARFE +C V GKPVLEGEAVLMVP R
Sbjct:    1 MNLITRQAYYFEDLEVGMEASFAKTVSEADIIAFAEVTGDKNPVHLDAAYAAKTIFKEPIAHGMLTAGYISTVFGMELPGPGAIYVSQTLNFRGPVKVGDRVVAKVRVMELYPAKRRARFESICSVAGKPVLEGEAVLMVPTR 143          
BLAST of mRNA_P-wetherbeei_contig17451.1.1 vs. uniprot
Match: A0A2W4S0V8_9PROT (Acyl dehydratase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4S0V8_9PROT)

HSP 1 Score: 213 bits (541), Expect = 1.180e-68
Identity = 101/143 (70.63%), Postives = 120/143 (83.92%), Query Frame = 1
Query:    7 MTIMQRKTYCFEDLEPGMEASCQKTVSEADIVAYADVSGDKNPVHLDEDYAKRTPFKTRIAHGMLTASYISAVFGMEMPGPGAIYVSQTLNFKAPVRIGDVVTAKVKLLELYPTKRRARFECVCLVGGKPVLEGEAVLMVPGR 435
            MT+M RK+Y FEDL+ GMEAS QK ++EAD+ A+A+V+GDKNPVHLD D+A +T FK RIAHGMLTAS ISAVFG + PGPG IY+SQTLNF+APV+ G  VTAKVK++ELYP KRRA FECVC   GK VLEGEA+L+VPGR
Sbjct:    1 MTVMPRKSYYFEDLDLGMEASLQKVITEADVAAFAEVTGDKNPVHLDPDFAAKTIFKERIAHGMLTASLISAVFGTKFPGPGVIYISQTLNFRAPVKFGQTVTAKVKVVELYPAKRRALFECVCTADGKVVLEGEAMLLVPGR 143          
BLAST of mRNA_P-wetherbeei_contig17451.1.1 vs. uniprot
Match: A0A3S0E1C1_9HYPH (MaoC family dehydratase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0E1C1_9HYPH)

HSP 1 Score: 212 bits (540), Expect = 1.630e-68
Identity = 100/143 (69.93%), Postives = 120/143 (83.92%), Query Frame = 1
Query:    7 MTIMQRKTYCFEDLEPGMEASCQKTVSEADIVAYADVSGDKNPVHLDEDYAKRTPFKTRIAHGMLTASYISAVFGMEMPGPGAIYVSQTLNFKAPVRIGDVVTAKVKLLELYPTKRRARFECVCLVGGKPVLEGEAVLMVPGR 435
            MT+  R+ Y FEDL  GMEAS  + V+ +DIV +A+V+GDKNPVHLDE YA +T FK  IAHGMLTA YIS VFGME+PGPGAIY+SQTLNF+ PV+IGD V A+VK++ELYP KRRARF+C+CLV GKPV+EGEA+LMVPGR
Sbjct:    1 MTVQTRQAYAFEDLVVGMEASYARKVTASDIVQFAEVTGDKNPVHLDEAYAAKTIFKEPIAHGMLTAGYISTVFGMELPGPGAIYISQTLNFRGPVKIGDEVIARVKVMELYPAKRRARFDCLCLVAGKPVVEGEAILMVPGR 143          
BLAST of mRNA_P-wetherbeei_contig17451.1.1 vs. uniprot
Match: A0A7C2LQA9_9HYPH (MaoC family dehydratase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LQA9_9HYPH)

HSP 1 Score: 212 bits (539), Expect = 2.720e-68
Identity = 104/143 (72.73%), Postives = 121/143 (84.62%), Query Frame = 1
Query:    7 MTIMQRKTYCFEDLEPGMEASCQKTVSEADIVAYADVSGDKNPVHLDEDYAKRTPFKTRIAHGMLTASYISAVFGMEMPGPGAIYVSQTLNFKAPVRIGDVVTAKVKLLELYPTKRRARFECVCLVGGKPVLEGEAVLMVPGR 435
            M +++R+ Y FEDLE GMEAS  KTV+EADIV +A+V+GDKNPVHLD  YA +T FK  IAHGMLTA YISAVFG+E+PGPGAIYVSQTLNF+APV++GD V AKV+++ELYP KRRARFE VC V GK VLEGEAVLMVP R
Sbjct:    1 MNVIKRQVYFFEDLEIGMEASFAKTVTEADIVTFAEVTGDKNPVHLDAAYAAKTVFKEPIAHGMLTAGYISAVFGLELPGPGAIYVSQTLNFRAPVKVGDRVVAKVRVMELYPPKRRARFESVCTVEGKAVLEGEAVLMVPAR 143          
BLAST of mRNA_P-wetherbeei_contig17451.1.1 vs. uniprot
Match: A0A2W4KTL0_9PROT (Acyl dehydratase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KTL0_9PROT)

HSP 1 Score: 211 bits (538), Expect = 3.390e-68
Identity = 103/143 (72.03%), Postives = 122/143 (85.31%), Query Frame = 1
Query:    7 MTIMQRKTYCFEDLEPGMEASCQKTVSEADIVAYADVSGDKNPVHLDEDYAKRTPFKTRIAHGMLTASYISAVFGMEMPGPGAIYVSQTLNFKAPVRIGDVVTAKVKLLELYPTKRRARFECVCLVGGKPVLEGEAVLMVPGR 435
            MTI+ RKTY FEDLE GMEAS QK V+E DI A+A+V+GD+NPVHLD +YA +T FK RIAHGMLTAS+ISAVF ME+PGPG IYVSQTLNF+APV+IG  VTAKV+++EL+P KRRARF+ +C V GK VLEGEA+LMVP R
Sbjct:    1 MTILTRKTYYFEDLELGMEASYQKLVTEGDINAFAEVTGDRNPVHLDPEYAAKTIFKERIAHGMLTASFISAVFAMELPGPGVIYVSQTLNFRAPVKIGQTVTAKVRVVELFPAKRRARFDTICTVDGKVVLEGEAMLMVPSR 143          
BLAST of mRNA_P-wetherbeei_contig17451.1.1 vs. uniprot
Match: A0A2S5P5B5_HYPSQ (Acyl dehydratase n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5P5B5_HYPSQ)

HSP 1 Score: 209 bits (533), Expect = 1.900e-67
Identity = 103/141 (73.05%), Postives = 120/141 (85.11%), Query Frame = 1
Query:   13 IMQRKTYCFEDLEPGMEASCQKTVSEADIVAYADVSGDKNPVHLDEDYAKRTPFKTRIAHGMLTASYISAVFGMEMPGPGAIYVSQTLNFKAPVRIGDVVTAKVKLLELYPTKRRARFECVCLVGGKPVLEGEAVLMVPGR 435
            + ++KT+ F+DL  GMEAS  KTV+EADI A+A+VSGDKNPVHLD  YA +T FK RIAHGML+A YISAVFGMEMPGPGAIY+SQTLNFKAPV+IGD V AKVK++ELYP K+RARFECVC V  KPV+ GEA+LMVP R
Sbjct:    1 MTKQKTFYFDDLHVGMEASFAKTVTEADINAFAEVSGDKNPVHLDAAYAAKTMFKERIAHGMLSAGYISAVFGMEMPGPGAIYISQTLNFKAPVKIGDTVVAKVKVVELYPEKKRARFECVCSVSDKPVVVGEAMLMVPLR 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17451.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TTU2_9HYPH4.720e-7580.42MaoC family dehydratase n=1 Tax=Hyphomicrobiales b... [more]
A0A1Q3JZ94_9PROT1.920e-7476.92Acyl dehydratase n=2 Tax=Alphaproteobacteria TaxID... [more]
A0A6N6SXD6_9HYPH1.540e-6974.83MaoC family dehydratase n=1 Tax=Hyphomicrobiaceae ... [more]
A0A0D6JAF9_9HYPH2.190e-6972.41(R)-specific enoyl-CoA hydratase (Modular protein)... [more]
A0A537RBU8_9PROT4.870e-6972.73MaoC family dehydratase n=1 Tax=Alphaproteobacteri... [more]
A0A2W4S0V8_9PROT1.180e-6870.63Acyl dehydratase n=1 Tax=Proteobacteria bacterium ... [more]
A0A3S0E1C1_9HYPH1.630e-6869.93MaoC family dehydratase n=1 Tax=Hyphomicrobiales b... [more]
A0A7C2LQA9_9HYPH2.720e-6872.73MaoC family dehydratase n=1 Tax=Hyphomicrobiales b... [more]
A0A2W4KTL0_9PROT3.390e-6872.03Acyl dehydratase n=1 Tax=Proteobacteria bacterium ... [more]
A0A2S5P5B5_HYPSQ1.900e-6773.05Acyl dehydratase n=2 Tax=Hyphomicrobium sp. TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17451contigP-wetherbeei_contig17451:2..436 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog717785.HYPMC_3849
PFAMsMaoC_dehydratas
Model size435
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00831
KEGG koko:K17865
KEGG ReactionR03027
KEGG Pathwayko00630,ko00650,ko01120,ko01200,map00630,map00650,map01120,map01200
KEGG ModuleM00373
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003859,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044281,GO:0046487,GO:0071704
Exons1
Evalue2.58e-62
EggNOG OGsCOG2030@1|root,COG2030@2|Bacteria,1MWPK@1224|Proteobacteria,2U5CQ@28211|Alphaproteobacteria,3N7E6@45401|Hyphomicrobiaceae
EC4.2.1.55
DescriptionMaoC like domain
Cds size429
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186117.953067-CDS-P-wetherbeei_contig17451:1..4301683186117.953067-CDS-P-wetherbeei_contig17451:1..430Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17451 2..430 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186117.9619184-UTR-P-wetherbeei_contig17451:430..4361683186117.9619184-UTR-P-wetherbeei_contig17451:430..436Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17451 431..436 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17451.1.1prot_P-wetherbeei_contig17451.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17451 2..430 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17451.1.1

>prot_P-wetherbeei_contig17451.1.1 ID=prot_P-wetherbeei_contig17451.1.1|Name=mRNA_P-wetherbeei_contig17451.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=143bp
MTIMQRKTYCFEDLEPGMEASCQKTVSEADIVAYADVSGDKNPVHLDEDY
AKRTPFKTRIAHGMLTASYISAVFGMEMPGPGAIYVSQTLNFKAPVRIGD
VVTAKVKLLELYPTKRRARFECVCLVGGKPVLEGEAVLMVPGR
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mRNA from alignment at P-wetherbeei_contig17451:2..436-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17451.1.1 ID=mRNA_P-wetherbeei_contig17451.1.1|Name=mRNA_P-wetherbeei_contig17451.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig17451:2..436- (Phaeothamnion wetherbeei SAG_119_79)
GCGGAAATGACGATAATGCAGCGCAAGACCTACTGCTTCGAAGACCTCGA GCCCGGCATGGAAGCAAGTTGCCAGAAGACCGTCAGCGAGGCCGACATCG TCGCCTATGCCGACGTTTCGGGCGACAAAAACCCTGTTCACCTCGACGAA GACTATGCCAAGCGCACCCCCTTCAAGACGCGAATCGCCCATGGGATGTT GACCGCGAGTTACATTTCGGCGGTGTTCGGGATGGAAATGCCGGGTCCCG GCGCGATCTACGTCTCGCAGACATTGAACTTCAAAGCGCCGGTTCGGATC GGCGATGTCGTCACGGCCAAGGTGAAGTTACTTGAGCTGTATCCCACCAA GCGCCGCGCCCGGTTCGAGTGCGTCTGCCTCGTCGGCGGAAAGCCGGTAC TCGAGGGCGAGGCGGTATTGATGGTGCCAGGACGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17451:2..436-

>mRNA_P-wetherbeei_contig17451.1.1 ID=mRNA_P-wetherbeei_contig17451.1.1|Name=mRNA_P-wetherbeei_contig17451.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=429bp|location=Sequence derived from alignment at P-wetherbeei_contig17451:2..436- (Phaeothamnion wetherbeei SAG_119_79)
ATGACGATAATGCAGCGCAAGACCTACTGCTTCGAAGACCTCGAGCCCGG
CATGGAAGCAAGTTGCCAGAAGACCGTCAGCGAGGCCGACATCGTCGCCT
ATGCCGACGTTTCGGGCGACAAAAACCCTGTTCACCTCGACGAAGACTAT
GCCAAGCGCACCCCCTTCAAGACGCGAATCGCCCATGGGATGTTGACCGC
GAGTTACATTTCGGCGGTGTTCGGGATGGAAATGCCGGGTCCCGGCGCGA
TCTACGTCTCGCAGACATTGAACTTCAAAGCGCCGGTTCGGATCGGCGAT
GTCGTCACGGCCAAGGTGAAGTTACTTGAGCTGTATCCCACCAAGCGCCG
CGCCCGGTTCGAGTGCGTCTGCCTCGTCGGCGGAAAGCCGGTACTCGAGG
GCGAGGCGGTATTGATGGTGCCAGGACGG
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