mRNA_P-wetherbeei_contig17446.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17446.1.1 vs. uniprot
Match: A0A7S2V2L3_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2L3_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.230e-49 Identity = 83/127 (65.35%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 25 NVAAVLLAGGIGSRMKADRPKQFLELRGKPILTYSIELLLSIDSVRQLVLVIDEQYREKFAGLAAREPRLVFADPGKERQDSVWNGLAQVAADAELVCVHDAARPLVTSKDINQVLADAMKHGAAVL 405
V+ VLLAGG+GSRMKADRPKQFLEL G+P+L ++I+L S+ V Q++LV+DEQYR + ++ EPRL FADPGKERQDSV NGL+ V A LVCVHDAARPLVT ++I+QV+ADA +HGAAVL
Sbjct: 66 KVSVVLLAGGVGSRMKADRPKQFLELLGRPVLDHTIDLFRSLRGVDQIILVLDEQYRPNYQSVSDEEPRLKFADPGKERQDSVCNGLSLVGEGASLVCVHDAARPLVTPENIHQVIADAEEHGAAVL 192
BLAST of mRNA_P-wetherbeei_contig17446.1.1 vs. uniprot
Match: A0A835YTP8_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP8_9STRA) HSP 1 Score: 167 bits (422), Expect = 5.050e-49 Identity = 81/127 (63.78%), Postives = 104/127 (81.89%), Query Frame = 1
Query: 25 NVAAVLLAGGIGSRMKADRPKQFLELRGKPILTYSIELLLSIDSVRQLVLVIDEQYREKFAGLAAREPRLVFADPGKERQDSVWNGLAQVAADAELVCVHDAARPLVTSKDINQVLADAMKHGAAVL 405
+VAA++LAGG+GSRMKA+ PKQFLELRGKP+L +S+EL S+D + +++LVID+QYR++F + EPRLVFADPG ERQ+SV+NGL V A +VC+HDAARPLVT + I QVL DA +HGAAVL
Sbjct: 50 DVAAIILAGGVGSRMKANMPKQFLELRGKPVLQHSLELFRSLDGISRIILVIDQQYRDQFKTMQEEEPRLVFADPGIERQNSVFNGLQAVHEGASVVCIHDAARPLVTKECIYQVLRDAEEHGAAVL 176
BLAST of mRNA_P-wetherbeei_contig17446.1.1 vs. uniprot
Match: A0A7S1UCG6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCG6_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.110e-48 Identity = 85/130 (65.38%), Postives = 101/130 (77.69%), Query Frame = 1
Query: 16 APTNVAAVLLAGGIGSRMKADRPKQFLELRGKPILTYSIELLLSIDSVRQLVLVIDEQYREKFAGLAAREPRLVFADPGKERQDSVWNGLAQVAADAELVCVHDAARPLVTSKDINQVLADAMKHGAAVL 405
AP +VA VLLAGG+GSRMKADRPKQFL L GKP+L ++IEL I+ V Q+VLV+DEQYR ++ AA + R VFADPGKERQDSV NGL++V A LV VHDAARPLVT +I VL D ++HGAAVL
Sbjct: 46 APKDVAVVLLAGGVGSRMKADRPKQFLTLAGKPVLEHTIELFRGIEGVSQIVLVLDEQYRGEWKKFAAADERFVFADPGKERQDSVENGLSKVVDGASLVAVHDAARPLVTPAEIYNVLMDGVEHGAAVL 175
BLAST of mRNA_P-wetherbeei_contig17446.1.1 vs. uniprot
Match: A0A7S2DHR1_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHR1_9STRA) HSP 1 Score: 162 bits (411), Expect = 3.530e-47 Identity = 77/127 (60.63%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 25 NVAAVLLAGGIGSRMKADRPKQFLELRGKPILTYSIELLLSIDSVRQLVLVIDEQYREKFAGLAAREPRLVFADPGKERQDSVWNGLAQVAADAELVCVHDAARPLVTSKDINQVLADAMKHGAAVL 405
NVA +LLAGG+GSRMKA++PKQFLEL GKP+L +++EL LS+D + ++VLVID +Y +F L A P+L+FA PGKERQDSV+NGL ++ DA +VC+HDAARPL+T + I +VL D ++HGAAVL
Sbjct: 68 NVAVILLAGGVGSRMKANQPKQFLELLGKPVLMHTLELFLSLDGIARVVLVIDAKYESQFEPLQALNPKLIFAPPGKERQDSVFNGLQKINDDAPVVCIHDAARPLITPEAIYKVLRDGIEHGAAVL 194
BLAST of mRNA_P-wetherbeei_contig17446.1.1 vs. uniprot
Match: A0A6S9KIB4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KIB4_HETAK) HSP 1 Score: 162 bits (409), Expect = 8.710e-47 Identity = 86/131 (65.65%), Postives = 101/131 (77.10%), Query Frame = 1
Query: 13 AAPTNVAAVLLAGGIGSRMKADRPKQFLELRGKPILTYSIELLLSIDSVRQLVLVIDEQYREKFAGLAAREPRLVFADPGKERQDSVWNGLAQVAADAELVCVHDAARPLVTSKDINQVLADAMKHGAAVL 405
A+ +VA +LLAGG GSRMKADRPKQFL LRGKP+L +++EL L + V QLVLV+ EQYR ++ A R+ R+VFADPGKERQDSV NGL V A A LV VHDAARPLVT +I QV+ADA HGAAVL
Sbjct: 67 ASGADVAVILLAGGTGSRMKADRPKQFLGLRGKPVLDHTLELFLGLPYVSQLVLVLAEQYRGEYQPYADRDARVVFADPGKERQDSVSNGLGAVGAGAALVAVHDAARPLVTPGNIAQVVADARAHGAAVL 197
BLAST of mRNA_P-wetherbeei_contig17446.1.1 vs. uniprot
Match: A0A7S4UD44_GUITH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UD44_GUITH) HSP 1 Score: 160 bits (405), Expect = 5.770e-46 Identity = 75/132 (56.82%), Postives = 103/132 (78.03%), Query Frame = 1
Query: 10 QAAPTNVAAVLLAGGIGSRMKADRPKQFLELRGKPILTYSIELLLSIDSVRQLVLVIDEQYREKFAGLAAREPRLVFADPGKERQDSVWNGLAQVAADAELVCVHDAARPLVTSKDINQVLADAMKHGAAVL 405
++A +V+ +LLAGG+GSRMKADRPKQFLEL GKPIL +S+EL + I V ++V+VI +YR+ A + ++ R+ FA+PGKERQDSV+NGL + A D L+C+HDAARPLVT ++I + DA++HGAAVL
Sbjct: 86 ESAIDDVSVILLAGGVGSRMKADRPKQFLELEGKPILRHSLELFMKIQGVTRIVIVIAPEYRDSLADVTKKDARICFAEPGKERQDSVFNGLQETALDTSLICIHDAARPLVTEQEILSCMNDALEHGAAVL 217
BLAST of mRNA_P-wetherbeei_contig17446.1.1 vs. uniprot
Match: A0A7R9UV26_DIALT (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UV26_DIALT) HSP 1 Score: 155 bits (392), Expect = 2.010e-44 Identity = 79/128 (61.72%), Postives = 101/128 (78.91%), Query Frame = 1
Query: 25 NVAAVLLAGGIGSRMKADRPKQFLELRGKPILTYSIELLLSIDSVRQLVLVIDEQYREKFAG-LAAREPRLVFADPGKERQDSVWNGLAQVAADAELVCVHDAARPLVTSKDINQVLADAMKHGAAVL 405
AA++LAGG+GSRMKADRPKQ L+L GKP++ +S+EL L + S+ ++VLV+DEQYR A AA RL FADPGKERQDSV NGLA V DA L+CVHD+ARPLV+ +++ +V+ADA +HGAAVL
Sbjct: 55 RAAAIVLAGGVGSRMKADRPKQLLDLVGKPVMMHSLELFLGMPSITKVVLVLDEQYRPLVAPHKAAHGDRLAFADPGKERQDSVANGLALVGDDAPLICVHDSARPLVSVRNVLEVIADAAEHGAAVL 182
BLAST of mRNA_P-wetherbeei_contig17446.1.1 vs. uniprot
Match: A0A7S0EBA3_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EBA3_9EUKA) HSP 1 Score: 155 bits (391), Expect = 2.120e-44 Identity = 80/132 (60.61%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 16 APTNVAAVLLAGGIGSRMKADRPKQFLELRGKPILTYSIELLLSIDSVRQLVLVIDEQYR--EKFAGLAAREPRLVFADPGKERQDSVWNGLAQVAADAELVCVHDAARPLVTSKDINQVLADAMKHGAAVL 405
A NVA VLLAGG GSRMKADRPKQFLELRGKP+L +SI+LLL + + LV+VI E++R + A AAR+ R+ FADPGKERQDS WNGL V + +V +HDAARPLVT ++ +AD +HGAAVL
Sbjct: 44 ASENVAVVLLAGGSGSRMKADRPKQFLELRGKPVLEHSIDLLLGVQQLTALVIVIAEEFRTMDFVAAAAARDSRVQFADPGKERQDSTWNGLEAVPKECTIVAIHDAARPLVTLDAVHTCIADGAEHGAAVL 175
BLAST of mRNA_P-wetherbeei_contig17446.1.1 vs. uniprot
Match: W7TNV7_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNV7_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.630e-43 Identity = 71/127 (55.91%), Postives = 97/127 (76.38%), Query Frame = 1
Query: 25 NVAAVLLAGGIGSRMKADRPKQFLELRGKPILTYSIELLLSIDSVRQLVLVIDEQYREKFAGLAAREPRLVFADPGKERQDSVWNGLAQVAADAELVCVHDAARPLVTSKDINQVLADAMKHGAAVL 405
V+ VLLAGG+G RMKADRPKQF+EL GKP+L +S+E+ ++ V ++V+V+D+ YR++F+ L +PR+VFADPGKERQDSV+NG +Q DA +VC+HD+ARPLV+ + L D HGAAVL
Sbjct: 83 GVSVVLLAGGVGKRMKADRPKQFIELLGKPVLLHSLEIFSTLPGVNRIVIVLDKSYRQEFSFLQEEDPRIVFADPGKERQDSVFNGFSQTLPDASVVCIHDSARPLVSQSAVLASLRDGSVHGAAVL 209
BLAST of mRNA_P-wetherbeei_contig17446.1.1 vs. uniprot
Match: A0A0G4G666_VITBC (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G666_VITBC) HSP 1 Score: 152 bits (385), Expect = 3.240e-43 Identity = 73/127 (57.48%), Postives = 94/127 (74.02%), Query Frame = 1
Query: 25 NVAAVLLAGGIGSRMKADRPKQFLELRGKPILTYSIELLLSIDSVRQLVLVIDEQYREKFAGLAAREPRLVFADPGKERQDSVWNGLAQVAADAELVCVHDAARPLVTSKDINQVLADAMKHGAAVL 405
NV +LLAGG+G RM ADRPKQFLEL GKP+L +S+EL L++ V+ +VLV+DE YR+ F G R+ R+VFA PG+ERQDSVWNGL + +VC+HD+ARPLVT + Q + DA HGAAV+
Sbjct: 64 NVGVILLAGGVGKRMNADRPKQFLELMGKPVLEHSVELFLTLPGVKHIVLVLDEAYRDTFRG---RDERIVFAPPGEERQDSVWNGLQAMPEGVSVVCIHDSARPLVTQGTVLQCIRDANTHGAAVV 187 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17446.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17446.1.1 >prot_P-wetherbeei_contig17446.1.1 ID=prot_P-wetherbeei_contig17446.1.1|Name=mRNA_P-wetherbeei_contig17446.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp LLIQAAPTNVAAVLLAGGIGSRMKADRPKQFLELRGKPILTYSIELLLSIback to top mRNA from alignment at P-wetherbeei_contig17446:6..1316- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17446.1.1 ID=mRNA_P-wetherbeei_contig17446.1.1|Name=mRNA_P-wetherbeei_contig17446.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1311bp|location=Sequence derived from alignment at P-wetherbeei_contig17446:6..1316- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17446:6..1316- >mRNA_P-wetherbeei_contig17446.1.1 ID=mRNA_P-wetherbeei_contig17446.1.1|Name=mRNA_P-wetherbeei_contig17446.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig17446:6..1316- (Phaeothamnion wetherbeei SAG_119_79)back to top |