mRNA_P-wetherbeei_contig17366.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17366.1.1
Unique NamemRNA_P-wetherbeei_contig17366.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17366.1.1 vs. uniprot
Match: A0A6H5JKI7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI7_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.220e-31
Identity = 74/183 (40.44%), Postives = 105/183 (57.38%), Query Frame = 1
Query:    7 EDNACRLAQAVLEGAAFLHARGICHRDISLENVMLERLPDGSVSARIVDLGMAVAVPRDGRGGAVRLAAQGRCGKPAYISPEVFADRS---FDAASADIWSCACVVYAALLGIQPWKCAAAGTDPLYRAIAVHGKLAPLLANWGLAKQVSPAAVDLLQRLLLDDPSKRLTSFDAALQHPWFAA 546
            ED A  L + VL G   L   G+CHRD+SLEN+ML    D  V  ++VD G+A+ +P++  G A  +  QG CGKP YI+PEV A  S   FD  + D+W+C  +++  L G+ P++ A    D     +AV+  LA LL+ W ++  +SP A DL+Q  LL  P +R  S +A   H WF A
Sbjct:   62 EDEARLLLRQVLTGLLHLKRHGVCHRDVSLENLMLT---DEGV-LKLVDFGLALRIPQNEDGSARTIPPQGACGKPHYIAPEVLASSSKSGFDGFAVDVWACGILLFVMLTGVAPFEVALPFHDERLHTVAVNENLAELLSTWNIS--LSPEATDLIQSCLLFAPERR-PSLEALANHDWFNA 237          
BLAST of mRNA_P-wetherbeei_contig17366.1.1 vs. uniprot
Match: D7FTS8_ECTSI (SOS2 (SALT OVERLY SENSITIVE 2) kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS8_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 5.140e-28
Identity = 68/183 (37.16%), Postives = 103/183 (56.28%), Query Frame = 1
Query:    7 EDNACRLAQAVLEGAAFLHARGICHRDISLENVMLERLPDGSVSARIVDLGMAVAVPRDGRGGAVRLAAQGRCGKPAYISPEVFADR---SFDAASADIWSCACVVYAALLGIQPWKCAAAGTDPLYRAIAVHGKLAPLLANWGLAKQVSPAAVDLLQRLLLDDPSKRLTSFDAALQHPWFAA 546
            E  A  L + VL     L   G+CHRD+SLEN++L    D   + ++VD G+A+ +P+   GGA  L  QG CGKP YI+PEV +      FD  + D+W+C  +++  L G+ P++ A    D   + +AV  +L  LL+ WG++  +SP A  L+Q  L   P++R  S +  L+HPW  A
Sbjct:  207 EGEARPLFRQVLHALRHLKIHGVCHRDVSLENLLL----DEGNTVKLVDFGLALRIPQKPDGGARVLLPQGPCGKPFYIAPEVLSSSVSSGFDGFAVDVWACGVLLFVMLTGVPPFEMALPSQDQRCQIVAVEERLVDLLSAWGIS--LSPEAAGLIQSCLRHSPAER-PSVENLLRHPWMKA 382          
BLAST of mRNA_P-wetherbeei_contig17366.1.1 vs. uniprot
Match: D8LLV2_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV2_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 8.740e-28
Identity = 71/184 (38.59%), Postives = 104/184 (56.52%), Query Frame = 1
Query:    7 EDNACRLAQAVLEGAAFLHARGICHRDISLENVMLERLPDGSVSARIVDLGMAVAVPRDGRGGAVRLAAQGRCGKPAYISPEVFADRS----FDAASADIWSCACVVYAALLGIQPWKCAAAGTDPLYRAIAVHGKLAPLLANWGLAKQVSPAAVDLLQRLLLDDPSKRLTSFDAALQHPWFAA 546
            ED A  L + VL+G   L   G+CHRD+SLEN++L    +G V  ++VD G+A+ +P++  G A  +  QG CGKP YI+PEV A  S    FD  + D+W+   +++  L G+ P++ A    D     +AV   LA LL+ W ++  +SP A DL+Q  LL  P +R  S +A   H W  A
Sbjct:  199 EDEARLLLRQVLDGLLHLKRHGVCHRDVSLENLVLTE--EGVV--KLVDFGLALRIPQNEDGRARTIPPQGVCGKPHYIAPEVLASSSSKSGFDGFAVDVWASGILLFVMLTGVAPFEVALPSHDERLHTVAVKENLAELLSTWNIS--LSPEATDLIQSCLLFAPERR-PSLEALANHDWLNA 375          
BLAST of mRNA_P-wetherbeei_contig17366.1.1 vs. uniprot
Match: B8BR32_THAPS (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR32_THAPS)

HSP 1 Score: 112 bits (281), Expect = 2.170e-27
Identity = 69/180 (38.33%), Postives = 102/180 (56.67%), Query Frame = 1
Query:   37 VLEGAAFLHARGICHRDISLENVMLERLPDGSVSARIVDLGMAVAVP----------RDGRGGAVR--LAAQGRCGKPAYISPEVFADRS-FDAASADIWSCACVVYAALLGIQPWKCAAAGTDPLYRAIAVHGKLAPLLANWGLAKQVSPAAVDLLQRLLLDDPSKRLTSFDAALQHPW 537
            +L     L  +GICHRDISLEN+++    D +  A ++D+GM + VP           D   G +R  +   G+CGKP YISPEV  +   FD  + D+W+   V++  L+G+ P++ A+   DP YR +   G L  L+  W   +Q+SP A DLLQ++L + P+ RLT FD  + HPW
Sbjct:   75 LLNALYHLQKKGICHRDISLENILV----DQNTKALVIDMGMCLRVPFNSPTGCESVYDSSAGTLRKLIYPAGQCGKPNYISPEVLLNNEPFDGFAVDLWAAGIVLFIMLIGLPPFEWAS-NDDPRYRLVC-RGGLGQLIQQWH--RQISPLAADLLQKMLREHPTDRLTLFDV-MNHPW 245          
BLAST of mRNA_P-wetherbeei_contig17366.1.1 vs. uniprot
Match: A0A7S2DZ55_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2DZ55_9STRA)

HSP 1 Score: 110 bits (274), Expect = 9.850e-27
Identity = 71/199 (35.68%), Postives = 101/199 (50.75%), Query Frame = 1
Query:    1 MSEDNACRLAQAVLEGAAFLHARGICHRDISLENVMLERLPDGSVSARIVDLGMAVAVPRDG--------------RGGAVRLAAQGRCGKPAYISPEVF-ADRSFDAASADIWSCACVVYAALLGIQPWKCAAAGTDPLYRAIAVHGKLAPLLANWGLAKQVSPAAVDLLQRLLLDDPSKRLTSFDAALQHPWFAAIG 552
            +SED+A R    +LE    +   G+ HRDISLEN+ML     G     ++D+GMA+ +P +               RG    +     CGKP Y+SPE+F + + FD  + D+W+   +++A + G  PW    + TDP Y  I  HG L  L A W L   +SP  +DLLQR+L + P  RL S +    HPW    G
Sbjct:   18 LSEDDARRWIVQILEAIETMQRVGVVHRDISLENLMLH----GDSDCLVIDMGMALRIPYENVTAENVNNIVVPEERGERFLIGPLQPCGKPQYMSPEIFDSQQPFDGHAVDLWAVGVMLFAMVTGSLPWDMPCS-TDPYYDHICRHGHLEQLCARWNLG--LSPQLIDLLQRMLRERPIDRL-SLEQIRAHPWMGGGG 208          
BLAST of mRNA_P-wetherbeei_contig17366.1.1 vs. uniprot
Match: B7FS93_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FS93_PHATC)

HSP 1 Score: 110 bits (275), Expect = 1.760e-26
Identity = 66/178 (37.08%), Postives = 104/178 (58.43%), Query Frame = 1
Query:   37 VLEGAAFLHARGICHRDISLENVMLERLPDGSVSARIVDLGMAVAVPRDGRGGAVRLAAQGR----------CGKPAYISPEVF-ADRSFDAASADIWSCACVVYAALLGIQPWKCAAAGTDPLYRAIAVHGKLAPLLANWGLAKQVSPAAVDLLQRLLLDDPSKRLTSFDAALQHPW 537
            +LEG + L   G+CHRD+SLEN+++++      ++ I+DLGM + VP DG G  V   + G           CGKP YISPEV  +  +FD  + D+W+ A +++  ++G+ PW+ A    DP YR + + G L  +L +W   +++SP   DLLQ++L +DP  RL+  +    HPW
Sbjct:   60 ILEGVSHLQRMGVCHRDLSLENILVDKYR----TSIIIDLGMCLRVPYDG-GNHVTDVSSGTIRRLIKPLVPCGKPNYISPEVLKSHEAFDGFAVDLWASAVILFIMVVGLPPWEYAN-NDDPRYRMV-IGGGLERMLRSWD--REISPLVADLLQKMLREDPRHRLSLMEIK-DHPW 227          
BLAST of mRNA_P-wetherbeei_contig17366.1.1 vs. uniprot
Match: A0A6H5K2Q5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2Q5_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 2.880e-26
Identity = 67/180 (37.22%), Postives = 102/180 (56.67%), Query Frame = 1
Query:    7 EDNACRLAQAVLEGAAFLHARGICHRDISLENVMLERLPDGSVSARIVDLGMAVAVPRDGRGGAVRLAAQGRCGKPAYISPEVFADRS---FDAASADIWSCACVVYAALLGIQPWKCAAAGTDPLYRAIAVHGKLAPLLANWGLAKQVSPAAVDLLQRLLLDDPSKRLTSFDAALQHPW 537
            E  A  L + VL+G   L   G+CHRD+SLEN++     +G V  ++VD G+A+ +P+   G A  +  QG CGKP Y++PEV A  +   FD  + D+W+C  +V+A L G+ P++ A    D  +  +AV  +L  LL+ W +   +SP A DL+Q  LL  P +R  S +  + H W
Sbjct:  304 EGQARLLFRQVLDGLLHLKRHGVCHRDVSLENLLFAE--EGVV--KLVDFGLALRIPQSEDGSARIIPPQGPCGKPYYMAPEVVASSTSSGFDGFAVDVWACGILVFAMLTGVAPFELALPSQDMRFHTVAVRERLTELLSAWNMP--LSPEATDLIQSCLLLAPERR-PSLEELVDHDW 476          
BLAST of mRNA_P-wetherbeei_contig17366.1.1 vs. uniprot
Match: A0A1E7EV49_9STRA (Kinase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EV49_9STRA)

HSP 1 Score: 109 bits (273), Expect = 3.970e-26
Identity = 65/177 (36.72%), Postives = 101/177 (57.06%), Query Frame = 1
Query:   37 VLEGAAFLHARGICHRDISLENVMLERLPDGSVSARIVDLGMAVAVPRDGRGGAVRLAAQGR---------CGKPAYISPEVFA-DRSFDAASADIWSCACVVYAALLGIQPWKCAAAGTDPLYRAIAVHGKLAPLLANWGLAKQVSPAAVDLLQRLLLDDPSKRLTSFDAALQHPW 537
            +L+G   L   G+CHRD+SLEN+++    D    + ++DLGM + VP D  G    + + G          CGKP YISPE+ + D  FD  + D+W+   +++  L+G+ PW+ A    DP Y+ + + GKLA +L +W   + +S  A DLLQ++L++DP +RL S      HPW
Sbjct:   60 ILDGLTHLQRMGVCHRDMSLENILV----DEYTRSIVIDLGMCLRVPYDNGGEIGDVTSGGLRRLIRPLIPCGKPNYISPEILSSDGPFDGFAIDLWATGVILFIMLVGLPPWEFARP-EDPRYKMV-IKGKLARMLDSW--KRPISAQAADLLQKMLMEDPRQRL-SLTEVKDHPW 227          
BLAST of mRNA_P-wetherbeei_contig17366.1.1 vs. uniprot
Match: A0A1Z5JLN4_FISSO (Protein kinase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLN4_FISSO)

HSP 1 Score: 112 bits (279), Expect = 5.330e-26
Identity = 69/179 (38.55%), Postives = 105/179 (58.66%), Query Frame = 1
Query:   37 VLEGAAFLHARGICHRDISLENVMLERLPDGSVSARIVDLGMAVAVPRD-GRGGAVRLAAQGR----------CGKPAYISPEVF-ADRSFDAASADIWSCACVVYAALLGIQPWKCAAAGTDPLYRAIAVHGKLAPLLANWGLAKQVSPAAVDLLQRLLLDDPSKRLTSFDAALQHPW 537
            +LEG   L  +G+CHRD+SLEN++++       +A ++DLGM + VP D G  G V   + G           CGKP YISPEV  ++  FD  + D+W+ A +++  L+G+ PW+ A    DP +R +A  G L  +L +W   +++SP A DLLQ++L +DP +RL S +    HPW
Sbjct:  195 ILEGLTHLQKKGVCHRDMSLENILVDEYR----TAVVIDLGMCLRVPYDDGETGGVADVSAGTLRRLINPLIPCGKPNYISPEVLKSEVPFDGFAIDLWATAVMLFIMLVGLPPWEFARE-EDPRFRMVA-RGGLERMLRSWN--REISPLAADLLQKMLREDPRQRL-SLEEVKVHPW 364          
BLAST of mRNA_P-wetherbeei_contig17366.1.1 vs. uniprot
Match: A0A7S2UUC5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUC5_9STRA)

HSP 1 Score: 111 bits (277), Expect = 6.130e-26
Identity = 65/179 (36.31%), Postives = 109/179 (60.89%), Query Frame = 1
Query:    7 EDNACRLAQAVLEGAAFLHARGICHRDISLENVMLERLPDGSVSARIVDLGMAVAVPRDGRGGA-VRLAAQGRCGKPAYISPEVFAD-RSFDAASADIWSCACVVYAALLGIQPWKCAAAGTDPLYRAIAVHGKLAPLLANWGLAKQVSPAAVDLLQRLLLDDPSKRLTSFDAALQHPW 537
            ED A +  + +L G  +LH+RG+CHRD+SLENV++ +      +  I+D+GM + +P D   G  + +  QG+CGK  Y+SPE+F + R F   + D W+C  +++  L G+ P++  A   DP ++ I+   +L+ +L+ W +   +SP AVDLL R+L  +P +RL  ++  + HPW
Sbjct:  176 EDRARQYFREILCGTNYLHSRGVCHRDLSLENVLVSQN-----TCIIIDMGMCLRMPVDQTTGKHLLINPQGQCGKRNYMSPEIFLNKRPFSGEAIDFWACGIILFIMLTGVPPFE-TATEVDPRFQMIS-SWRLSEMLSLWEI--NLSPEAVDLLSRMLRPNPQERL-KYEEIMAHPW 344          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17366.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKI7_9PHAE1.220e-3140.44Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FTS8_ECTSI5.140e-2837.16SOS2 (SALT OVERLY SENSITIVE 2) kinase n=2 Tax=Ecto... [more]
D8LLV2_ECTSI8.740e-2838.59Serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
B8BR32_THAPS2.170e-2738.33Protein kinase domain-containing protein (Fragment... [more]
A0A7S2DZ55_9STRA9.850e-2735.68Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B7FS93_PHATC1.760e-2637.08Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A6H5K2Q5_9PHAE2.880e-2637.22Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A1E7EV49_9STRA3.970e-2636.72Kinase-like protein n=1 Tax=Fragilariopsis cylindr... [more]
A0A1Z5JLN4_FISSO5.330e-2638.55Protein kinase domain-containing protein n=2 Tax=F... [more]
A0A7S2UUC5_9STRA6.130e-2636.31Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17366contigP-wetherbeei_contig17366:339..905 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FTS8
PFAMsPkinase
Model size567
Max annot lvl2759|Eukaryota
KEGG rclassRC01978
KEGG koko:K03644
KEGG ReactionR07767,R07768
KEGG Pathwayko00785,ko01100,map00785,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.42e-29
EggNOG OGsKOG0583@1|root,KOG0583@2759|Eukaryota
EC2.8.1.8
Descriptionprotein serine/threonine kinase activity
Cds size567
COG categoryG
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186115.4568968-CDS-P-wetherbeei_contig17366:338..9051683186115.4568968-CDS-P-wetherbeei_contig17366:338..905Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17366 339..905 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17366.1.1prot_P-wetherbeei_contig17366.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17366 339..905 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17366.1.1

>prot_P-wetherbeei_contig17366.1.1 ID=prot_P-wetherbeei_contig17366.1.1|Name=mRNA_P-wetherbeei_contig17366.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=189bp
MSEDNACRLAQAVLEGAAFLHARGICHRDISLENVMLERLPDGSVSARIV
DLGMAVAVPRDGRGGAVRLAAQGRCGKPAYISPEVFADRSFDAASADIWS
CACVVYAALLGIQPWKCAAAGTDPLYRAIAVHGKLAPLLANWGLAKQVSP
AAVDLLQRLLLDDPSKRLTSFDAALQHPWFAAIGARGGG
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mRNA from alignment at P-wetherbeei_contig17366:339..905-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17366.1.1 ID=mRNA_P-wetherbeei_contig17366.1.1|Name=mRNA_P-wetherbeei_contig17366.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=567bp|location=Sequence derived from alignment at P-wetherbeei_contig17366:339..905- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCAGAAGACAATGCCTGCCGTCTGGCGCAGGCGGTGCTAGAGGGCGC CGCCTTTCTCCACGCGCGCGGCATCTGCCACCGCGACATCTCGCTCGAGA ATGTCATGCTGGAGCGGCTCCCTGACGGATCCGTCTCTGCCCGCATCGTC GATCTCGGCATGGCAGTCGCTGTTCCACGCGACGGCCGTGGCGGCGCGGT CCGGCTGGCGGCGCAGGGTCGCTGTGGCAAGCCGGCGTACATTTCCCCCG AGGTCTTCGCGGACCGAAGTTTTGACGCGGCGTCGGCCGACATTTGGTCG TGCGCCTGCGTCGTTTACGCGGCTCTCCTCGGCATCCAGCCATGGAAGTG CGCCGCCGCGGGCACGGACCCACTCTACCGCGCGATCGCCGTGCACGGCA AGTTGGCGCCGCTGCTGGCGAACTGGGGGCTAGCGAAACAGGTGTCGCCG GCGGCCGTCGACCTGCTGCAGCGGTTACTGCTGGACGACCCTTCAAAGCG GCTGACGTCGTTCGACGCGGCGCTGCAGCACCCGTGGTTCGCGGCGATCG GCGCACGCGGGGGTGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17366:339..905-

>mRNA_P-wetherbeei_contig17366.1.1 ID=mRNA_P-wetherbeei_contig17366.1.1|Name=mRNA_P-wetherbeei_contig17366.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=567bp|location=Sequence derived from alignment at P-wetherbeei_contig17366:339..905- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCAGAAGACAATGCCTGCCGTCTGGCGCAGGCGGTGCTAGAGGGCGC
CGCCTTTCTCCACGCGCGCGGCATCTGCCACCGCGACATCTCGCTCGAGA
ATGTCATGCTGGAGCGGCTCCCTGACGGATCCGTCTCTGCCCGCATCGTC
GATCTCGGCATGGCAGTCGCTGTTCCACGCGACGGCCGTGGCGGCGCGGT
CCGGCTGGCGGCGCAGGGTCGCTGTGGCAAGCCGGCGTACATTTCCCCCG
AGGTCTTCGCGGACCGAAGTTTTGACGCGGCGTCGGCCGACATTTGGTCG
TGCGCCTGCGTCGTTTACGCGGCTCTCCTCGGCATCCAGCCATGGAAGTG
CGCCGCCGCGGGCACGGACCCACTCTACCGCGCGATCGCCGTGCACGGCA
AGTTGGCGCCGCTGCTGGCGAACTGGGGGCTAGCGAAACAGGTGTCGCCG
GCGGCCGTCGACCTGCTGCAGCGGTTACTGCTGGACGACCCTTCAAAGCG
GCTGACGTCGTTCGACGCGGCGCTGCAGCACCCGTGGTTCGCGGCGATCG
GCGCACGCGGGGGTGGC
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