mRNA_P-wetherbeei_contig17310.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17310.1.1 vs. uniprot
Match: A0A7S2VQL8_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VQL8_9DINO) HSP 1 Score: 185 bits (470), Expect = 2.210e-55 Identity = 98/187 (52.41%), Postives = 126/187 (67.38%), Query Frame = 1
Query: 1 QQCATLAAEVAARS-----HPLDLELVIVSPLTRTLQTAFLSLGAAADAPGAPTFLANELCRERIADFTCDGRRSVTELREEFPGVDWSLVTDDEDRLFYEDKEDD-----AKCRRRAVKFLEWLAARPEERIAVVTHSIFLKNLFHQFGFDVAESDRSELRAFPKNAEMRGIMLCAHRPFSEENDD 531
QQCA L A + + PL+L+LV+ SPLTR LQTA LSLG APGAP F+ NELCRERIAD+TCD RR + L+ +FP +++ LV D+ED +F KE D AKC R V+FL+WL RPE IAVVT+S+FLK+LF QFG +++ D+ + FP NAEMR IMLCAHR + ++
Sbjct: 85 QQCAKLKANIRGDTVWGFDKPLNLDLVVCSPLTRCLQTAVLSLGDPG-APGAPPFIVNELCRERIADYTCDRRRKRSVLKADFPSINFDLVKDEEDTMFLNQKEGDSTEGEAKCSERGVEFLKWLCGRPEIHIAVVTNSVFLKSLFSQFGSNLSREDQECIHKFPANAEMRSIMLCAHRKLASTKEE 270
BLAST of mRNA_P-wetherbeei_contig17310.1.1 vs. uniprot
Match: A0A7S0M519_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M519_9CRYP) HSP 1 Score: 186 bits (473), Expect = 3.540e-55 Identity = 98/173 (56.65%), Postives = 119/173 (68.79%), Query Frame = 1
Query: 4 QCATLAAEVAARSHPLDLELVIVSPLTRTLQTAFLSLGAAA-DAPGAPTFLANELCRERIADFTCDGRRSVTELREEFPGVDWSLVTDDEDRLFYEDKEDDAKCRRRAVKFLEWLAARPEERIAVVTHSIFLKNLFHQFGFDVAESDRSELRAFPKNAEMRGIMLCAHRPFSE 519
QC L E+ A HPLDLELV+VSPLTRTLQTA ++ + D P F+A ELCRER+ D RR V+ L++EFP VD+S V DED +F KED C++R +KFL+WLA RPE RIAVVTHS FLK LF QFG D+A D+ EL P N EMRG++LCAHR FS+
Sbjct: 161 QCGRLRREIEALPHPLDLELVVVSPLTRTLQTAMRTVPPSLHDVP----FVATELCRERVTSCPADSRRPVSVLKKEFPAVDFSEVRTDEDLMFECMKEDSDACKQRGIKFLQWLAKRPETRIAVVTHSGFLKRLFEQFGMDIARDDQDELHRRPANCEMRGLLLCAHRHFSD 329
BLAST of mRNA_P-wetherbeei_contig17310.1.1 vs. uniprot
Match: A0A7S0BBC7_9DINO (Hypothetical protein n=3 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0BBC7_9DINO) HSP 1 Score: 187 bits (474), Expect = 3.710e-55 Identity = 100/176 (56.82%), Postives = 124/176 (70.45%), Query Frame = 1
Query: 1 QQCATLAAEVAARS-----HPLDLELVIVSPLTRTLQTAFLSLGAAADAPGAPTFLANELCRERIADFTCDGRRSVTELREEFPGVDWSLVTDDEDRLFYEDKEDDAKCRRRAVKFLEWLAARPEERIAVVTHSIFLKNLFHQFGFDVAESDRSELRAFPKNAEMRGIMLCAHRPF 513
+QCA L A V + PL+L+LV+VSP RTLQTA LSLG+ D+PGAP F+A+E CRE+ + CD RRS+TEL+ EFPGVD+SL+ D D++F E +E D ++RAV FL+WL RPE RIAVVTHS FL+NL QFG ++AE DR L NAEMR IMLCAHR F
Sbjct: 152 EQCANLKASVRGTAVWGFDKPLNLDLVVVSPTMRTLQTAHLSLGSP-DSPGAPPFIAHEGCREKNGRYMCDSRRSITELKREFPGVDFSLIEHDHDQMF-EKEESDEDVQKRAVAFLQWLCGRPELRIAVVTHSFFLRNLLRQFGGEIAEEDREYLHGNWVNAEMRSIMLCAHRKF 325
BLAST of mRNA_P-wetherbeei_contig17310.1.1 vs. uniprot
Match: L1J5Z9_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J5Z9_GUITC) HSP 1 Score: 182 bits (462), Expect = 1.670e-53 Identity = 90/174 (51.72%), Postives = 121/174 (69.54%), Query Frame = 1
Query: 1 QQCATLAAEVAARSHPLDLELVIVSPLTRTLQTAFLSLGAAADAPGAPTFLANELCRERIADFTCDGRRSVTELREEFPGVDWS-LVTDDEDRLFYEDKEDDAKCRRRAVKFLEWLAARPEERIAVVTHSIFLKNLFHQFGFDVAESDRSELRAFPKNAEMRGIMLCAHRPFSE 519
+QCA L E+ + +H LD E+V+VSPLTRTLQTA L++G+ P F+A +LCRERI + D RR ++ L+EEFP VD+S + + D ++++ KED C+ R ++FL+WLA RPE RIAVVTHS FL LF QFG +A D+ ELR P N EMRG++LCAHR FS+
Sbjct: 157 EQCAKLRKELKSMAHQLDCEVVVVSPLTRTLQTARLTIGSVKFMDSPPPFIATDLCRERITNCPADSRRRLSVLKEEFPEVDFSQCIQSEHDSMWFDHKEDSQLCKERGIRFLKWLAKRPESRIAVVTHSGFLNRLFSQFGLGIAPDDQEELRRRPANCEMRGLILCAHRHFSD 330
BLAST of mRNA_P-wetherbeei_contig17310.1.1 vs. uniprot
Match: A0A7S0U8H7_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U8H7_HEMAN) HSP 1 Score: 169 bits (429), Expect = 1.230e-50 Identity = 89/170 (52.35%), Postives = 109/170 (64.12%), Query Frame = 1
Query: 4 QCATLAAEVAARSHPLDLELVIVSPLTRTLQTAFLSLGAAADAPGAPTFLANELCRERIADFTCDGRRSVTELREEFPGVDWSLVTDDEDRLFYEDKEDDAKCRRRAVKFLEWLAARPEERIAVVTHSIFLKNLFHQFGFDVAESDRSELRAFPKNAEMRGIMLCAHRPF 513
QC L E+ LD EL +VSPLTRTLQTA L++GA FLA E+CRER+ D RR+ + L EEFP VD+S V D+ D + ++KEDDA C++R +KFL+WLA R E I VVTHS FLK LF QFG +A D EL P N EMRG++LCAHR F
Sbjct: 4 QCKKLRKELEEMERYLDWELCVVSPLTRTLQTALLTVGAVRHEGEPIKFLATEMCRERVTMCPADSRRNKSVLEEEFPEVDFSQVKDEFDMAWRDEKEDDAACKQRGIKFLQWLALRRESCITVVTHSGFLKRLFEQFGMGIASEDMEELHRRPANCEMRGLVLCAHRQF 173
BLAST of mRNA_P-wetherbeei_contig17310.1.1 vs. uniprot
Match: A0A7S2R9B5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R9B5_9STRA) HSP 1 Score: 145 bits (367), Expect = 3.760e-40 Identity = 82/172 (47.67%), Postives = 103/172 (59.88%), Query Frame = 1
Query: 58 ELVIVSPLTRTLQTA--------------FLSLGAAADA-PGA--------PTFLANELCRERIADFTCDGRRSVTELREEFPGVDWSLVTDDEDRLFYEDKEDDAKCRRRAVKFLEWLAARPEERIAVVTHSIFLKNLFHQFGFDVAESDRSELRAFPKNAEMRGIMLCAH 504
+LV+VSPLTRT +TA FL+ G A D P A P FL E CRER + CDGRRS+TE+ EFP D+S + DED + +++E D C RAVKFLEWL +RPE+ IAVVTHS FL++LF QFG + DR L+ N E+R IMLC+H
Sbjct: 56 DLVVVSPLTRTCETALHVFGQPREPGMPAFLARGEAPDGTPEASAGINIPPPRFLVKEECRERWGKYVCDGRRSITEIASEFPNFDFSEIVHDEDEFYSDERESDEHCCERAVKFLEWLNSRPEKCIAVVTHSSFLRHLFGQFGETLHYEDRENLQRLAGNCELRSIMLCSH 227
BLAST of mRNA_P-wetherbeei_contig17310.1.1 vs. uniprot
Match: A0A7S1H1A8_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H1A8_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.950e-38 Identity = 80/172 (46.51%), Postives = 100/172 (58.14%), Query Frame = 1
Query: 58 ELVIVSPLTRTLQTAFLSLGA-----------AADAPG------------APTFLANELCRERIADFTCDGRRSVTELREEFPGVDWSLVTDDEDRLFYEDKEDDAKCRRRAVKFLEWLAARPEERIAVVTHSIFLKNLFHQFGFDVAESDRSELRAFPKNAEMRGIMLCAH 504
+LV+VSPLTRT +TA GA DAP AP FL E CRER + CDGRRS+ E+ EFP D+S V DED + + +E D C RAVKFLEWL ARPE+ IAVVTHS FL++LF QFG ++ D +L+ N E+R I+LC+H
Sbjct: 56 DLVVVSPLTRTCETALHVFGAPRKPGAPAFLSGQDAPKTSAEYRAGIQVPAPRFLVKEECRERWGHYVCDGRRSIQEIAAEFPDFDFSEVIHDEDAFYSDQRESDDDCCERAVKFLEWLNARPEKCIAVVTHSSFLRHLFGQFGGNLHNEDMKDLQRLAGNCELRSIVLCSH 227
BLAST of mRNA_P-wetherbeei_contig17310.1.1 vs. uniprot
Match: A0A1E7ETA9_9STRA (Phosphoglycerate mutase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETA9_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.970e-38 Identity = 82/174 (47.13%), Postives = 100/174 (57.47%), Query Frame = 1
Query: 58 ELVIVSPLTRTLQTA--------------FLSLGAAADAPGAPT-----------FLANELCRERIADFTCDGRRSVTELREEFPGVDWSLVTDDEDRLFYEDKEDDAKCRRRAVKFLEWLAARPEERIAVVTHSIFLKNLFHQFGFDVAESDRSELRAFPKNAEMRGIMLCAH 504
+LV+VSPLTRT +TA FLS G A PG P FL E CRER + CDGRRS+ E+ EFP D+S +T DED + +++E D C RAVKFLEWL RPE+ IAVVTHS FL++LF QFG DR L+ N E+R IMLC+H
Sbjct: 85 DLVVVSPLTRTCETALHVFGQPRQPGQPSFLSKGIAP--PGTPENAAGINIPPPRFLVREECRERWGQYVCDGRRSIAEISAEFPNFDFSDITHDEDVFYSDERESDEHCCDRAVKFLEWLNQRPEKCIAVVTHSSFLRHLFGQFGETQTYEDRENLQRVAGNCELRSIMLCSH 256
BLAST of mRNA_P-wetherbeei_contig17310.1.1 vs. uniprot
Match: A0A6V1PBB4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PBB4_HETAK) HSP 1 Score: 142 bits (359), Expect = 4.670e-38 Identity = 79/174 (45.40%), Postives = 101/174 (58.05%), Query Frame = 1
Query: 58 ELVIVSPLTRTLQTAFLSLG-------------AAADAPG------------APTFLANELCRERIADFTCDGRRSVTELREEFPGVDWSLVTDDEDRLFYEDKEDDAKCRRRAVKFLEWLAARPEERIAVVTHSIFLKNLFHQFGFDVAESDRSELRAFPKNAEMRGIMLCAH 504
+LV+VSPLTRT +TA G A DAP AP FL E CRER + CDGRRS+TE+ EFP DWS V +ED + +++E D C RAV+FLEWL RPE+ IAVVTHS FL++LF QFG + R+EL+ N E+R ++LC+H
Sbjct: 115 DLVVVSPLTRTCETALHVFGRPRPPGSSAFMPQARRDAPAHSEEAAAGIRVPAPRFLVREECRERWGHYVCDGRRSITEIAAEFPDFDWSEVEHNEDLYYSDERESDEHCCERAVRFLEWLNQRPEKCIAVVTHSSFLRHLFGQFGETHTDDTRTELQRLAGNCELRSVVLCSH 288
BLAST of mRNA_P-wetherbeei_contig17310.1.1 vs. uniprot
Match: A0A7S1I190_9EUGL (Hypothetical protein n=5 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I190_9EUGL) HSP 1 Score: 140 bits (352), Expect = 2.780e-37 Identity = 75/172 (43.60%), Postives = 104/172 (60.47%), Query Frame = 1
Query: 58 ELVIVSPLTRTLQTA--------------FLSLGAAADAPG---------APTFLANELCRERIADFTCDGRRSVTELREEFPGVDWSLVTDDEDRLFYEDKEDDAKCRRRAVKFLEWLAARPEERIAVVTHSIFLKNLFHQFGFDVAESDRSELRAFPKNAEMRGIMLCAH 504
+LV+VSPLTRTL+TA FL G A + AP L E CRER ++ CDGRR++TE+ +EFPG D+S + DED + +++E D C RAV FL+WL RPE IAVVTHS FL++LF QFG ++A D++ L+ N E+R +++C+H
Sbjct: 114 DLVVVSPLTRTLETALHIFGRPRTPGQPAFLDPGMAPEGSPEWHAGQRCPAPRILVREECRERWGEYVCDGRRNITEIAKEFPGFDFSEIEYDEDVFYADERESDPHCWDRAVSFLDWLNQRPESCIAVVTHSSFLRHLFGQFGDNLASDDKASLQRLAGNCELRSVVMCSH 285 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17310.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17310.1.1 >prot_P-wetherbeei_contig17310.1.1 ID=prot_P-wetherbeei_contig17310.1.1|Name=mRNA_P-wetherbeei_contig17310.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp QQCATLAAEVAARSHPLDLELVIVSPLTRTLQTAFLSLGAAADAPGAPTFback to top mRNA from alignment at P-wetherbeei_contig17310:118..1438- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17310.1.1 ID=mRNA_P-wetherbeei_contig17310.1.1|Name=mRNA_P-wetherbeei_contig17310.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1321bp|location=Sequence derived from alignment at P-wetherbeei_contig17310:118..1438- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17310:118..1438- >mRNA_P-wetherbeei_contig17310.1.1 ID=mRNA_P-wetherbeei_contig17310.1.1|Name=mRNA_P-wetherbeei_contig17310.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig17310:118..1438- (Phaeothamnion wetherbeei SAG_119_79)back to top |