mRNA_P-wetherbeei_contig1720.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1720.3.1
Unique NamemRNA_P-wetherbeei_contig1720.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1720.3.1 vs. uniprot
Match: A0A3C0TXN1_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TXN1_9PROT)

HSP 1 Score: 695 bits (1794), Expect = 1.140e-251
Identity = 327/383 (85.38%), Postives = 358/383 (93.47%), Query Frame = 1
Query:    7 MIARKSAWMDEDLQIFSGSVAKFFEREALPHNARWNEEGKIDRNFWNKAGEAGLLCVTIPEEYGGMGGDFRHEAVIVQQEQWMHFSGWGNGVHSGICAPYILSYGTEEQKKRWLPKLATGELVAAIAMTEPGTGSDLQAVRTTARRDGNSLVINGQKTFITNGQHADLIIVVCKTGDVSGGAKNISLVVVEANEVTGYRRGRNLDKVGLHAQDTSELFFDDVRVPAGNILGGDEGRGFYQLMQQLPRERLIIALGSVAGMEAAIDVTVDYVKQRKAFGKALLDFQNTQFVLADCKAEAVVARTFVDQYIERLVRGELTPEEGAVAKLWACETHCRVVDKCLQLFGGYGYMMEYPIGRMYADARIQRIYGGTSEIMRLLISRAL 1155
            MI+ KSAWMDE+L+IFSGSVAKFFEREA+PHN RWN EGKIDR FWNKAG+AGLLCVTIP EYGG GGDFRHEAVIVQQEQW+HFSGWGNGVHSGICAPYIL+YGTEEQKKRWLPKLATGE+VAAIAMTEPGTGSDLQ+VR TARRDG+  VINGQKTFITNGQHADLII VCKTGD+ GGAKN+SLVVVEA +  G+RRGRNLDK+GLHAQDTSELF+DDVRVP  N+LGG+EGRGFYQLMQQLPRERLIIALG+VAGMEAA+  T  YVK+RKAFGKALLDFQNTQFVLADCKAEAVVAR+F+D Y+ RL++GEL+PEEGA+AKLWACET C+VVDKCLQLFGGYGYMMEYPI RMYADAR+QRIYGGTSEIMRLLI+R L
Sbjct:    1 MISHKSAWMDEELEIFSGSVAKFFEREAIPHNERWNREGKIDREFWNKAGDAGLLCVTIPAEYGGAGGDFRHEAVIVQQEQWLHFSGWGNGVHSGICAPYILAYGTEEQKKRWLPKLATGEMVAAIAMTEPGTGSDLQSVRATARRDGDHYVINGQKTFITNGQHADLIITVCKTGDIGGGAKNVSLVVVEAAQAPGFRRGRNLDKIGLHAQDTSELFYDDVRVPVENLLGGEEGRGFYQLMQQLPRERLIIALGAVAGMEAAVAETARYVKERKAFGKALLDFQNTQFVLADCKAEAVVARSFIDDYVVRLMKGELSPEEGAIAKLWACETQCKVVDKCLQLFGGYGYMMEYPIARMYADARVQRIYGGTSEIMRLLIARTL 383          
BLAST of mRNA_P-wetherbeei_contig1720.3.1 vs. uniprot
Match: A0A352KD34_9PROT (Acyl-CoA dehydrogenase n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KD34_9PROT)

HSP 1 Score: 644 bits (1662), Expect = 1.470e-231
Identity = 302/383 (78.85%), Postives = 347/383 (90.60%), Query Frame = 1
Query:    7 MIARKSAWMDEDLQIFSGSVAKFFEREALPHNARWNEEGKIDRNFWNKAGEAGLLCVTIPEEYGGMGGDFRHEAVIVQQEQWMHFSGWGNGVHSGICAPYILSYGTEEQKKRWLPKLATGELVAAIAMTEPGTGSDLQAVRTTARRDGNSLVINGQKTFITNGQHADLIIVVCKTGDVSGGAKNISLVVVEANEVTGYRRGRNLDKVGLHAQDTSELFFDDVRVPAGNILGGDEGRGFYQLMQQLPRERLIIALGSVAGMEAAIDVTVDYVKQRKAFGKALLDFQNTQFVLADCKAEAVVARTFVDQYIERLVRGELTPEEGAVAKLWACETHCRVVDKCLQLFGGYGYMMEYPIGRMYADARIQRIYGGTSEIMRLLISRAL 1155
            M A K  WMDE+L+IF  SV KFFE+EA+PH  RW E+G+IDR+FWNKAGEAGLLC+TIP+EYGG+GGDFRHEA++V+Q+ +   +GWGNGVHSGICAPYIL+YGTEEQKK WLPKLATGE+VAAIAMTEPGTGSDLQAVRTTA+RDG+S VINGQKTFITNGQ ADLIIV+CKTGDVSGGAK++SLVVVE ++  G+RRGRNLDK+G HAQDTSELFFDDVRVPA N+LGG+EGRGF+QLMQQLPRERLIIA+G+VA ME+A+ VT +YVK+RKAFG  LLDFQNTQFVLA+CKAEAVVARTFVD Y+E+L+RGELT +EGAVAKLW  ET CR+VDKCLQ FGGYGYM EYPI RMYADAR+QRIYGGTSEIM+L+ISR L
Sbjct:    1 MQAVKRPWMDEELEIFQDSVGKFFEKEAVPHTERWIEQGQIDRDFWNKAGEAGLLCITIPQEYGGVGGDFRHEAILVEQQNFHRVAGWGNGVHSGICAPYILAYGTEEQKKNWLPKLATGEMVAAIAMTEPGTGSDLQAVRTTAKRDGDSYVINGQKTFITNGQQADLIIVICKTGDVSGGAKSVSLVVVETDKADGFRRGRNLDKIGQHAQDTSELFFDDVRVPAENLLGGEEGRGFFQLMQQLPRERLIIAVGAVAAMESALAVTAEYVKERKAFGNRLLDFQNTQFVLAECKAEAVVARTFVDAYVEKLMRGELTADEGAVAKLWTTETQCRIVDKCLQFFGGYGYMTEYPIARMYADARVQRIYGGTSEIMKLIISRTL 383          
BLAST of mRNA_P-wetherbeei_contig1720.3.1 vs. uniprot
Match: A0A6N6VJG9_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VJG9_9HYPH)

HSP 1 Score: 515 bits (1326), Expect = 2.160e-180
Identity = 246/385 (63.90%), Postives = 302/385 (78.44%), Query Frame = 1
Query:    1 DTMIARKSAWMDEDLQIFSGSVAKFFEREALPHNARWNEEGKIDRNFWNKAGEAGLLCVTIPEEYGGMGGDFRHEAVIVQQEQWMHFSGWGNGVHSGICAPYILSYGTEEQKKRWLPKLATGELVAAIAMTEPGTGSDLQAVRTTARRDGNSLVINGQKTFITNGQHADLIIVVCKTGDVSGGAKNISLVVVEANEVTGYRRGRNLDKVGLHAQDTSELFFDDVRVPAGNILGGDEGRGFYQLMQQLPRERLIIALGSVAGMEAAIDVTVDYVKQRKAFGKALLDFQNTQFVLADCKAEAVVARTFVDQYIERLVRGELTPEEGAVAKLWACETHCRVVDKCLQLFGGYGYMMEYPIGRMYADARIQRIYGGTSEIMRLLISRAL 1155
            D +   KS W+ E+L+I   +V KF+E+E  PH+ RWN++G +DR+ WNKAGEAG+LC +I EEYGG GG+F HE VI Q++     SG+GN VHSGI A YI +YGTEEQKK+WLPK+A+GE+VAAIAMTEPGTGSDLQ V+TTA++ GN  VINGQKTFITNGQ + LI VV KT D S GAK ISL++VE  EV G+RRGRNLDK+G+HAQDTSELFFDDV+VP  N+LG +EGRGF QLMQQLP+ERLIIA+ +   ME A+ +T  YVK+RKAFG++LLDFQNTQF LA+CK EA +AR F D    +L+ G+L     A+AK W  E  C++VD CLQ FGGYGYMMEYPI +MY D RIQ+IYGGT+EIM+LLI+R L
Sbjct:    2 DLIAGYKSPWLTEELEILQDAVRKFYEKEFAPHSDRWNKQGHVDRDAWNKAGEAGILCASISEEYGGGGGNFAHEMVIAQEQGRAGVSGFGNSVHSGIVAHYIEAYGTEEQKKKWLPKMASGEMVAAIAMTEPGTGSDLQGVKTTAKKVGNQYVINGQKTFITNGQQSTLICVVAKT-DPSAGAKGISLIMVETEEVEGFRRGRNLDKIGMHAQDTSELFFDDVKVPTSNLLGTEEGRGFIQLMQQLPQERLIIAVQACVAMEKAVSLTAAYVKERKAFGQSLLDFQNTQFKLAECKTEAAIARVFTDDCAMKLLDGKLDATTAAMAKWWTTEKQCQIVDTCLQFFGGYGYMMEYPIAQMYQDMRIQKIYGGTNEIMKLLIARTL 385          
BLAST of mRNA_P-wetherbeei_contig1720.3.1 vs. uniprot
Match: A0A081BC26_9HYPH (Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BC26_9HYPH)

HSP 1 Score: 511 bits (1316), Expect = 7.150e-179
Identity = 244/379 (64.38%), Postives = 299/379 (78.89%), Query Frame = 1
Query:   19 KSAWMDEDLQIFSGSVAKFFEREALPHNARWNEEGKIDRNFWNKAGEAGLLCVTIPEEYGGMGGDFRHEAVIVQQEQWMHFSGWGNGVHSGICAPYILSYGTEEQKKRWLPKLATGELVAAIAMTEPGTGSDLQAVRTTARRDGNSLVINGQKTFITNGQHADLIIVVCKTGDVSGGAKNISLVVVEANEVTGYRRGRNLDKVGLHAQDTSELFFDDVRVPAGNILGGDEGRGFYQLMQQLPRERLIIALGSVAGMEAAIDVTVDYVKQRKAFGKALLDFQNTQFVLADCKAEAVVARTFVDQYIERLVRGELTPEEGAVAKLWACETHCRVVDKCLQLFGGYGYMMEYPIGRMYADARIQRIYGGTSEIMRLLISRAL 1155
            KS W+DE+L+I   +V+KF+E+E +PH  +WNE+G +DR+ W KAGEAG+LC +I EEYGG GG F HE VI Q++      G+GN VHSGI A YI SYGTEEQKK+WLPK+A+GELV  IAMTEPGTGSDLQAVRTTA+++GN  V+NGQKTFITNGQ ADLI VV KT D   GAK +SL++VE  EV G+RRGRNL K+G  AQDTSELFFDDV+VP  N+LG DEG+GF+QLMQQLP+ERLIIA+ +   ME A+++T +YVK+RKAFG+ +LDFQNTQF LA+CK EA +AR F D   ERL+RGEL     A+AK W  +    ++D+CLQ FGGYGYM EYPI RMY DARIQ+IYGGT+EIM+LLISR +
Sbjct:    8 KSPWLDEELEILQDAVSKFYEKEFVPHVEKWNEQGCVDRDAWLKAGEAGILCASIKEEYGGGGGHFGHEMVIAQEQGRAGIGGFGNSVHSGIVAHYIQSYGTEEQKKKWLPKMASGELVGGIAMTEPGTGSDLQAVRTTAKKEGNQYVLNGQKTFITNGQTADLICVVAKT-DPEAGAKGVSLIMVETEEVEGFRRGRNLKKMGQKAQDTSELFFDDVKVPTANLLGTDEGKGFFQLMQQLPQERLIIAVQACVAMEKALELTSEYVKERKAFGQRILDFQNTQFKLAECKTEATIARVFTDNCAERLLRGELDATTAAMAKWWTTQKENEIIDECLQFFGGYGYMDEYPISRMYRDARIQKIYGGTNEIMKLLISRTI 385          
BLAST of mRNA_P-wetherbeei_contig1720.3.1 vs. uniprot
Match: UPI001BC58219 (Acyl-CoA dehydrogenase family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI001BC58219)

HSP 1 Score: 509 bits (1310), Expect = 4.720e-178
Identity = 242/373 (64.88%), Postives = 292/373 (78.28%), Query Frame = 1
Query:   37 EDLQIFSGSVAKFFEREALPHNARWNEEGKIDRNFWNKAGEAGLLCVTIPEEYGGMGGDFRHEAVIVQQEQWMHFSGWGNGVHSGICAPYILSYGTEEQKKRWLPKLATGELVAAIAMTEPGTGSDLQAVRTTARRDGNSLVINGQKTFITNGQHADLIIVVCKTGDVSGGAKNISLVVVEANEVTGYRRGRNLDKVGLHAQDTSELFFDDVRVPAGNILGGDEGRGFYQLMQQLPRERLIIALGSVAGMEAAIDVTVDYVKQRKAFGKALLDFQNTQFVLADCKAEAVVARTFVDQYIERLVRGELTPEEGAVAKLWACETHCRVVDKCLQLFGGYGYMMEYPIGRMYADARIQRIYGGTSEIMRLLISRAL 1155
            EDL+IF  S  +FFERE LPH  RW  EG +DR  WNKAG +GLLC  IPE YGG GG F HE +++++      +GWGN VHSGI APY+L YG+EEQKK+WLPKLA+GELVAAIAMTEPGTGSDLQ+VRTTA+ DGN  VINGQKTFITNGQHA L+ VV KT D   GAK +SL++VE ++V GYRRGRNL+K+GLHAQDTSELFFDDVRVP  N+LG  EG GF QLMQQLP+ERL+IA+ +VA ME A+++TV Y K RKAFGK LLDFQNT+F LA+CK EA VAR+FV+     L+  +L  +  A+AK W  +  C + D+CLQLFGGYGYM EYPI RM+ D+R+Q+IYGGT+EIM+ LI R+L
Sbjct:    8 EDLKIFRDSARRFFERECLPHVERWEREGIVDREIWNKAGASGLLCAMIPEAYGGAGGSFAHEKILIEEMIRAGVTGWGNAVHSGIVAPYLLHYGSEEQKKKWLPKLASGELVAAIAMTEPGTGSDLQSVRTTAKLDGNQYVINGQKTFITNGQHAGLVCVVAKT-DPKEGAKGVSLIMVEVDDVEGYRRGRNLEKIGLHAQDTSELFFDDVRVPTANLLGDREGLGFIQLMQQLPQERLVIAIQAVAAMERAVEITVAYSKDRKAFGKRLLDFQNTRFKLAECKTEAAVARSFVEHCTALLMEKKLDVQTAAMAKWWTTQKQCEIADECLQLFGGYGYMKEYPISRMWTDSRVQKIYGGTNEIMKELIGRSL 379          
BLAST of mRNA_P-wetherbeei_contig1720.3.1 vs. uniprot
Match: A0A2D4VHT9_9HYPH (Acyl-CoA dehydrogenase n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VHT9_9HYPH)

HSP 1 Score: 503 bits (1294), Expect = 1.580e-175
Identity = 240/379 (63.32%), Postives = 296/379 (78.10%), Query Frame = 1
Query:   19 KSAWMDEDLQIFSGSVAKFFEREALPHNARWNEEGKIDRNFWNKAGEAGLLCVTIPEEYGGMGGDFRHEAVIVQQEQWMHFSGWGNGVHSGICAPYILSYGTEEQKKRWLPKLATGELVAAIAMTEPGTGSDLQAVRTTARRDGNSLVINGQKTFITNGQHADLIIVVCKTGDVSGGAKNISLVVVEANEVTGYRRGRNLDKVGLHAQDTSELFFDDVRVPAGNILGGDEGRGFYQLMQQLPRERLIIALGSVAGMEAAIDVTVDYVKQRKAFGKALLDFQNTQFVLADCKAEAVVARTFVDQYIERLVRGELTPEEGAVAKLWACETHCRVVDKCLQLFGGYGYMMEYPIGRMYADARIQRIYGGTSEIMRLLISRAL 1155
            KS W++E+L+I   +V KF+ERE +PH  +WN++G +DR+ W KAGEAG+LC +IPEEYGG GG F HE VI Q++      G+GN VHSGI A Y+ +YGTEEQKK+WLPK+A+GELV AIAMTEPGTGSDLQ V+TTA++DGN  V+NGQKTFITNGQ+ADLI VV KT D   GAK  SL++VE +EV G+RRGRNL K+G  AQDTSELFFDDV+VP  N+LG DEG+GF QLMQQLP+ERLIIA+ +   ME A+ +T +Y K RKAFGK++LDFQNTQF LA+CK EA +AR FVD    +L+ G+L     A+AK W  E    +VD CLQ FGGYGYMMEYPI +MYADARIQ+IYGG +EIM++LI+R L
Sbjct:    8 KSPWLNEELEILQDAVKKFYEREFVPHVEKWNDQGCVDRDAWLKAGEAGILCASIPEEYGGGGGTFAHEMVITQEQSRAGVGGFGNSVHSGIVAHYVKAYGTEEQKKKWLPKMASGELVGAIAMTEPGTGSDLQGVKTTAKKDGNQYVLNGQKTFITNGQNADLICVVAKT-DPEAGAKGTSLIMVETDEVEGFRRGRNLKKLGQKAQDTSELFFDDVKVPLTNLLGEDEGKGFIQLMQQLPQERLIIAVQACCAMEKAVALTAEYTKDRKAFGKSILDFQNTQFKLAECKTEATIARVFVDDCAVKLLDGKLDATTAAMAKWWTTEKENEIVDTCLQFFGGYGYMMEYPIAQMYADARIQKIYGGANEIMKMLIARTL 385          
BLAST of mRNA_P-wetherbeei_contig1720.3.1 vs. uniprot
Match: A0A2A4S0B8_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A4S0B8_9HYPH)

HSP 1 Score: 499 bits (1284), Expect = 4.710e-174
Identity = 242/379 (63.85%), Postives = 293/379 (77.31%), Query Frame = 1
Query:   19 KSAWMDEDLQIFSGSVAKFFEREALPHNARWNEEGKIDRNFWNKAGEAGLLCVTIPEEYGGMGGDFRHEAVIVQQEQWMHFSGWGNGVHSGICAPYILSYGTEEQKKRWLPKLATGELVAAIAMTEPGTGSDLQAVRTTARRDGNSLVINGQKTFITNGQHADLIIVVCKTGDVSGGAKNISLVVVEANEVTGYRRGRNLDKVGLHAQDTSELFFDDVRVPAGNILGGDEGRGFYQLMQQLPRERLIIALGSVAGMEAAIDVTVDYVKQRKAFGKALLDFQNTQFVLADCKAEAVVARTFVDQYIERLVRGELTPEEGAVAKLWACETHCRVVDKCLQLFGGYGYMMEYPIGRMYADARIQRIYGGTSEIMRLLISRAL 1155
            KS W+ E+L I   +V KF+ RE LPH  +W ++GK+DR+ WNKAGEAGLLC +I EEYGG GG F HE +I Q+       G+ N VHSGI A YI SYGTEEQKK+WLPK+A+GELV AIAMTEPGTGSDLQ VR+TA + GN  VINGQKTFITNGQ+A+LI V+ KT D S G K +SLV+VE  EV G+RRGRNLDK+G  A DTSELFFDDVRVP  N+LG +EG+GFYQLMQQLP+ER+IIA  +V  ME A+  T +YVK+R AFGK +LDFQNTQF LA+CK EA +ARTFVDQ + RL++GEL     A+AK W  +    +VD CLQ FGG+GYM EYPI RMYAD+R+Q+IYGGT+EIM++LI+R L
Sbjct:    5 KSPWLTEELDILQDAVKKFYTREFLPHAEKWIDQGKVDRDAWNKAGEAGLLCASISEEYGGGGGTFAHEMIIDQELHRAGIPGFANSVHSGIVAHYIQSYGTEEQKKKWLPKMASGELVGAIAMTEPGTGSDLQNVRSTALKSGNEYVINGQKTFITNGQNAELICVIVKT-DPSAGGKGVSLVMVETEEVEGFRRGRNLDKLGQKAADTSELFFDDVRVPLTNLLGAEEGQGFYQLMQQLPQERIIIASSAVVTMEKALFHTTEYVKERTAFGKRILDFQNTQFKLAECKTEAAIARTFVDQCVVRLLKGELDATTAAMAKYWCTDKENEIVDTCLQFFGGFGYMNEYPIARMYADSRVQKIYGGTNEIMKMLIARTL 382          
BLAST of mRNA_P-wetherbeei_contig1720.3.1 vs. uniprot
Match: A0A0P1GY46_9RHOB (Acyl-CoA dehydrogenase n=9 Tax=Rhodobacterales TaxID=204455 RepID=A0A0P1GY46_9RHOB)

HSP 1 Score: 497 bits (1279), Expect = 3.010e-173
Identity = 238/384 (61.98%), Postives = 299/384 (77.86%), Query Frame = 1
Query:    7 MIARKSAWMDEDLQIFSGSVAKFFEREALPHNARWNEEGKIDRNFWNKAGEAGLLCVTIPEEYGGMGGDFRHEAVIV-QQEQWMHFSGWGNGVHSGICAPYILSYGTEEQKKRWLPKLATGELVAAIAMTEPGTGSDLQAVRTTARRDGNSLVINGQKTFITNGQHADLIIVVCKTGDVSGGAKNISLVVVEANEVTGYRRGRNLDKVGLHAQDTSELFFDDVRVPAGNILGGDEGRGFYQLMQQLPRERLIIALGSVAGMEAAIDVTVDYVKQRKAFGKALLDFQNTQFVLADCKAEAVVARTFVDQYIERLVRGELTPEEGAVAKLWACETHCRVVDKCLQLFGGYGYMMEYPIGRMYADARIQRIYGGTSEIMRLLISRAL 1155
            M A  S WMD++L +   S+  F+  E +PH ARW E+G IDR+FWNKAGE G+LC ++PEEYGGMGGDFRHEAVI  +Q +   FSG+GN VHS ICA YIL YG+EEQKKRWLPK+ATGE+V AIAMTEPGTGSDLQ+++TTA+ DGN  V++G KTFITNGQ ADLIIVV KT D S G+K ISL+VVE  +  G+ RGRNL+K+GL +QDTSELFFD+VRVP  N+LGG EG+GFYQLM+ LP+ERL++ALG  A M+ A++ TV Y  +RKAFGK LL+ QNT+F LA+ K  A +AR F+D  + + +RGEL     ++AK W  +  C  +D+CLQLFGGYGYM EYPI  MYADAR+Q+IYGG++EIM+ LI+R+L
Sbjct:    1 MTAHISPWMDDELTMLQDSLRDFYANEMVPHEARWQEQGHIDRDFWNKAGEIGILCASVPEEYGGMGGDFRHEAVIATEQYRAAGFSGFGNSVHSQICAGYILDYGSEEQKKRWLPKMATGEMVCAIAMTEPGTGSDLQSIKTTAKLDGNEYVVSGSKTFITNGQQADLIIVVTKT-DPSLGSKGISLIVVETADAPGFARGRNLEKLGLKSQDTSELFFDNVRVPPENLLGGVEGQGFYQLMKSLPQERLVVALGGAAAMDKALEETVAYTAERKAFGKPLLEMQNTRFKLAEVKTIAHIARVFLDDCVAKHLRGELDATTASMAKWWVTQMQCDTMDECLQLFGGYGYMSEYPISTMYADARVQKIYGGSNEIMKELIARSL 383          
BLAST of mRNA_P-wetherbeei_contig1720.3.1 vs. uniprot
Match: A0A7Y8MHH6_9PROT (Acyl-CoA dehydrogenase family protein n=1 Tax=Hydrogenophilaceae bacterium TaxID=2723029 RepID=A0A7Y8MHH6_9PROT)

HSP 1 Score: 495 bits (1274), Expect = 1.800e-172
Identity = 240/380 (63.16%), Postives = 298/380 (78.42%), Query Frame = 1
Query:   22 SAWMD-EDLQIFSGSVAKFFEREALPH-NARWNEEGKIDRNFWNKAGEAGLLCVTIPEEYGGMGGDFRHEAVIVQQEQWMHFSGWGNGVHSGICAPYILSYGTEEQKKRWLPKLATGELVAAIAMTEPGTGSDLQAVRTTARRDGNSLVINGQKTFITNGQHADLIIVVCKTGDVSGGAKNISLVVVEANEVTGYRRGRNLDKVGLHAQDTSELFFDDVRVPAGNILGGDEGRGFYQLMQQLPRERLIIALGSVAGMEAAIDVTVDYVKQRKAFGKALLDFQNTQFVLADCKAEAVVARTFVDQYIERLVRGELTPEEGAVAKLWACETHCRVVDKCLQLFGGYGYMMEYPIGRMYADARIQRIYGGTSEIMRLLISRAL 1155
            S W D E+L +F+ SV  FF RE  P  +A+W E+G ++R  W KAGEAGLLCV+ P EYGG GGDFRHE +I+         G+G  +H+ I  PYI+ YG+EEQK+RWLP++ATGELV AIAMTEPGTGSDLQAV+TTA++DGN  VINGQKTFITNGQ A+LI+VV KT D S GA+ ISL+VVE +E+ G+RRGRNLDKVG  AQDTSELFFDDVRVP  N+LG +EG+GF+QLM QLP+ERL IA+  VA +E A+++T+DYVKQR AFGK ++DFQNTQF LA+CK EA VAR FVD+ IE L+ G+L P   ++AK W  +  C++VD+CLQL GGYG+M EY IGRMY DAR+QRIYGG +EIM++LI+R L
Sbjct:    8 SKWRDDEELNLFADSVKTFFAREVPPERSAKWREDGVVEREMWTKAGEAGLLCVSAPAEYGGAGGDFRHECIIMDAMAKQGVDGFGLSLHNSIVTPYIVHYGSEEQKRRWLPRMATGELVTAIAMTEPGTGSDLQAVKTTAKKDGNHYVINGQKTFITNGQTANLIVVVAKT-DPSQGARGISLIVVETDEIDGFRRGRNLDKVGQEAQDTSELFFDDVRVPTSNLLGLEEGQGFFQLMGQLPQERLQIAVQGVAMIEKALELTIDYVKQRGAFGKKIIDFQNTQFKLAECKTEATVARVFVDRCIELLLEGKLDPATASMAKYWVSDIQCKIVDECLQLHGGYGFMNEYEIGRMYRDARVQRIYGGANEIMKVLIARTL 386          
BLAST of mRNA_P-wetherbeei_contig1720.3.1 vs. uniprot
Match: UPI001668B523 (acyl-CoA dehydrogenase family protein n=1 Tax=Chelatococcus reniformis TaxID=1494448 RepID=UPI001668B523)

HSP 1 Score: 493 bits (1268), Expect = 1.230e-171
Identity = 240/373 (64.34%), Postives = 288/373 (77.21%), Query Frame = 1
Query:   37 EDLQIFSGSVAKFFEREALPHNARWNEEGKIDRNFWNKAGEAGLLCVTIPEEYGGMGGDFRHEAVIVQQEQWMHFSGWGNGVHSGICAPYILSYGTEEQKKRWLPKLATGELVAAIAMTEPGTGSDLQAVRTTARRDGNSLVINGQKTFITNGQHADLIIVVCKTGDVSGGAKNISLVVVEANEVTGYRRGRNLDKVGLHAQDTSELFFDDVRVPAGNILGGDEGRGFYQLMQQLPRERLIIALGSVAGMEAAIDVTVDYVKQRKAFGKALLDFQNTQFVLADCKAEAVVARTFVDQYIERLVRGELTPEEGAVAKLWACETHCRVVDKCLQLFGGYGYMMEYPIGRMYADARIQRIYGGTSEIMRLLISRAL 1155
            ED+ IF     +FFERE  PH  RW ++G IDR  W KAGE GLLC +IPEEYGG GG+F HE V+V+++     SGWGNGVHSGI A Y+L YG+E+QK+ WLPKLATGE+VA IAMTEPGTGSDLQ VRT+A+RDGN  VING KTFITNGQ A+LI VV KT D + GAK ISL+VVE ++V G+RRGRNLDK+G H+ DTSELFFD+VRVP  N+LG  EG GF QLMQQLP+ERLIIA+ +VA ME A+D+T DYVKQR AFGK LLDFQNT+F LA+ K  A +AR FV+   E L+ G+L  E   +AK W  +   +++D+CLQLFGGYGYM EYPI RMY DAR+QRIYGGT+EIM+ LI R +
Sbjct:   10 EDVVIFREQARRFFERECAPHLDRWEDQGIIDREIWTKAGEQGLLCASIPEEYGGAGGNFAHEKVLVEEQIKAGISGWGNGVHSGIVAHYLLHYGSEDQKRTWLPKLATGEIVAGIAMTEPGTGSDLQGVRTSAKRDGNQYVINGAKTFITNGQTANLICVVAKT-DPAQGAKGISLIVVETDKVEGFRRGRNLDKIGQHSADTSELFFDEVRVPTANLLGDREGLGFVQLMQQLPQERLIIAVQAVAAMERALDLTADYVKQRTAFGKRLLDFQNTRFKLAEVKTHARIARVFVEHCTELLLVGKLDVETVCMAKWWTTDMENKIIDECLQLFGGYGYMREYPISRMYTDARVQRIYGGTTEIMKELIGRTI 381          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1720.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TXN1_9PROT1.140e-25185.38Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria... [more]
A0A352KD34_9PROT1.470e-23178.85Acyl-CoA dehydrogenase n=3 Tax=Alphaproteobacteria... [more]
A0A6N6VJG9_9HYPH2.160e-18063.90Acyl-CoA dehydrogenase n=1 Tax=Parvibaculum sedime... [more]
A0A081BC26_9HYPH7.150e-17964.38Acyl-CoA dehydrogenase domain-containing protein n... [more]
UPI001BC582194.720e-17864.88Acyl-CoA dehydrogenase family protein n=1 Tax=Hyph... [more]
A0A2D4VHT9_9HYPH1.580e-17563.32Acyl-CoA dehydrogenase n=2 Tax=Parvibaculum TaxID=... [more]
A0A2A4S0B8_9HYPH4.710e-17463.85Acyl-CoA dehydrogenase n=1 Tax=Rhodobiaceae bacter... [more]
A0A0P1GY46_9RHOB3.010e-17361.98Acyl-CoA dehydrogenase n=9 Tax=Rhodobacterales Tax... [more]
A0A7Y8MHH6_9PROT1.800e-17263.16Acyl-CoA dehydrogenase family protein n=1 Tax=Hydr... [more]
UPI001668B5231.230e-17164.34acyl-CoA dehydrogenase family protein n=1 Tax=Chel... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1720contigP-wetherbeei_contig1720:3735..4892 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1333998.M2A_2093
Preferred nameMA20_40160
PFAMsAcyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
Model size1158
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00052,RC00068,RC00076,RC00095,RC00148,RC00246
KEGG koko:K00249
KEGG ReactionR00924,R01175,R01279,R02661,R03172,R03777,R03857,R03990,R04095,R04432,R04751,R04754
KEGG Pathwayko00071,ko00280,ko00410,ko00640,ko01100,ko01110,ko01130,ko01200,ko01212,ko03320,map00071,map00280,map00410,map00640,map01100,map01110,map01130,map01200,map01212,map03320
KEGG ModuleM00013,M00036,M00087
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.09e-179
EggNOG OGsCOG1960@1|root,COG1960@2|Bacteria,1MUDR@1224|Proteobacteria,2TR15@28211|Alphaproteobacteria,4BRC4@82117|unclassified Alphaproteobacteria
EC1.3.8.7
DescriptionAcyl-CoA dehydrogenase, C-terminal domain
Cds size1152
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186110.8945098-CDS-P-wetherbeei_contig1720:3734..48861683186110.8945098-CDS-P-wetherbeei_contig1720:3734..4886Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1720 3735..4886 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186110.906268-UTR-P-wetherbeei_contig1720:4886..48921683186110.906268-UTR-P-wetherbeei_contig1720:4886..4892Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1720 4887..4892 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1720.3.1prot_P-wetherbeei_contig1720.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1720 3735..4886 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1720.3.1

>prot_P-wetherbeei_contig1720.3.1 ID=prot_P-wetherbeei_contig1720.3.1|Name=mRNA_P-wetherbeei_contig1720.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=384bp
MIARKSAWMDEDLQIFSGSVAKFFEREALPHNARWNEEGKIDRNFWNKAG
EAGLLCVTIPEEYGGMGGDFRHEAVIVQQEQWMHFSGWGNGVHSGICAPY
ILSYGTEEQKKRWLPKLATGELVAAIAMTEPGTGSDLQAVRTTARRDGNS
LVINGQKTFITNGQHADLIIVVCKTGDVSGGAKNISLVVVEANEVTGYRR
GRNLDKVGLHAQDTSELFFDDVRVPAGNILGGDEGRGFYQLMQQLPRERL
IIALGSVAGMEAAIDVTVDYVKQRKAFGKALLDFQNTQFVLADCKAEAVV
ARTFVDQYIERLVRGELTPEEGAVAKLWACETHCRVVDKCLQLFGGYGYM
MEYPIGRMYADARIQRIYGGTSEIMRLLISRAL*
back to top

mRNA from alignment at P-wetherbeei_contig1720:3735..4892-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1720.3.1 ID=mRNA_P-wetherbeei_contig1720.3.1|Name=mRNA_P-wetherbeei_contig1720.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1158bp|location=Sequence derived from alignment at P-wetherbeei_contig1720:3735..4892- (Phaeothamnion wetherbeei SAG_119_79)
GACACCATGATCGCGCGTAAATCTGCCTGGATGGACGAAGACCTGCAAAT TTTTTCCGGTAGCGTCGCAAAATTTTTCGAGCGTGAGGCGCTGCCCCATA ATGCGCGCTGGAATGAGGAAGGCAAGATTGACCGCAATTTCTGGAACAAG GCCGGTGAGGCGGGCCTGTTATGCGTCACCATCCCGGAGGAATATGGCGG CATGGGTGGCGATTTCCGCCACGAAGCGGTGATCGTGCAGCAGGAACAAT GGATGCATTTTTCAGGCTGGGGCAATGGGGTGCATAGCGGCATTTGCGCG CCCTATATCCTGTCCTATGGCACCGAGGAACAGAAAAAGCGCTGGCTGCC GAAACTGGCCACCGGCGAACTGGTCGCCGCCATCGCCATGACGGAACCCG GCACCGGGTCTGATTTGCAGGCGGTGCGCACTACCGCAAGGCGTGATGGC AATAGCCTGGTGATCAATGGCCAGAAAACCTTCATCACCAATGGTCAGCA TGCGGATTTAATTATTGTCGTATGCAAAACCGGTGATGTATCAGGCGGCG CCAAAAACATCTCTCTGGTGGTGGTCGAGGCGAATGAGGTCACCGGCTAC CGGCGCGGCCGCAATCTGGATAAGGTCGGCCTGCATGCGCAGGACACGTC GGAACTGTTTTTTGATGATGTGCGCGTACCCGCCGGTAATATACTGGGTG GCGATGAAGGCCGTGGTTTTTATCAGCTGATGCAGCAATTGCCGCGTGAG CGCCTGATTATCGCGCTGGGTTCGGTGGCCGGCATGGAGGCAGCGATTGA TGTCACCGTTGACTATGTCAAACAGCGCAAGGCGTTTGGCAAAGCCCTGC TGGATTTCCAGAATACGCAATTCGTGCTGGCCGATTGCAAGGCCGAGGCC GTGGTCGCACGCACTTTTGTGGATCAATATATCGAACGCCTGGTGCGTGG TGAACTGACGCCGGAAGAAGGCGCCGTCGCCAAGCTCTGGGCCTGCGAAA CCCATTGCCGGGTGGTGGATAAATGCCTGCAACTGTTCGGCGGCTATGGC TACATGATGGAATATCCCATCGGCCGCATGTATGCTGACGCCCGCATACA GCGCATCTATGGCGGCACAAGTGAAATCATGCGGCTGCTGATTTCGCGGG CGCTGTAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1720:3735..4892-

>mRNA_P-wetherbeei_contig1720.3.1 ID=mRNA_P-wetherbeei_contig1720.3.1|Name=mRNA_P-wetherbeei_contig1720.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1152bp|location=Sequence derived from alignment at P-wetherbeei_contig1720:3735..4892- (Phaeothamnion wetherbeei SAG_119_79)
ATGATCGCGCGTAAATCTGCCTGGATGGACGAAGACCTGCAAATTTTTTC
CGGTAGCGTCGCAAAATTTTTCGAGCGTGAGGCGCTGCCCCATAATGCGC
GCTGGAATGAGGAAGGCAAGATTGACCGCAATTTCTGGAACAAGGCCGGT
GAGGCGGGCCTGTTATGCGTCACCATCCCGGAGGAATATGGCGGCATGGG
TGGCGATTTCCGCCACGAAGCGGTGATCGTGCAGCAGGAACAATGGATGC
ATTTTTCAGGCTGGGGCAATGGGGTGCATAGCGGCATTTGCGCGCCCTAT
ATCCTGTCCTATGGCACCGAGGAACAGAAAAAGCGCTGGCTGCCGAAACT
GGCCACCGGCGAACTGGTCGCCGCCATCGCCATGACGGAACCCGGCACCG
GGTCTGATTTGCAGGCGGTGCGCACTACCGCAAGGCGTGATGGCAATAGC
CTGGTGATCAATGGCCAGAAAACCTTCATCACCAATGGTCAGCATGCGGA
TTTAATTATTGTCGTATGCAAAACCGGTGATGTATCAGGCGGCGCCAAAA
ACATCTCTCTGGTGGTGGTCGAGGCGAATGAGGTCACCGGCTACCGGCGC
GGCCGCAATCTGGATAAGGTCGGCCTGCATGCGCAGGACACGTCGGAACT
GTTTTTTGATGATGTGCGCGTACCCGCCGGTAATATACTGGGTGGCGATG
AAGGCCGTGGTTTTTATCAGCTGATGCAGCAATTGCCGCGTGAGCGCCTG
ATTATCGCGCTGGGTTCGGTGGCCGGCATGGAGGCAGCGATTGATGTCAC
CGTTGACTATGTCAAACAGCGCAAGGCGTTTGGCAAAGCCCTGCTGGATT
TCCAGAATACGCAATTCGTGCTGGCCGATTGCAAGGCCGAGGCCGTGGTC
GCACGCACTTTTGTGGATCAATATATCGAACGCCTGGTGCGTGGTGAACT
GACGCCGGAAGAAGGCGCCGTCGCCAAGCTCTGGGCCTGCGAAACCCATT
GCCGGGTGGTGGATAAATGCCTGCAACTGTTCGGCGGCTATGGCTACATG
ATGGAATATCCCATCGGCCGCATGTATGCTGACGCCCGCATACAGCGCAT
CTATGGCGGCACAAGTGAAATCATGCGGCTGCTGATTTCGCGGGCGCTGT
AA
back to top