mRNA_P-wetherbeei_contig17130.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17130.2.1
Unique NamemRNA_P-wetherbeei_contig17130.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17130.2.1 vs. uniprot
Match: A0A523NQ72_9PROT (Transporter substrate-binding domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NQ72_9PROT)

HSP 1 Score: 259 bits (661), Expect = 1.280e-76
Identity = 146/366 (39.89%), Postives = 208/366 (56.83%), Query Frame = 1
Query:    4 LRVEYLVADNDQQMLEWLRSGAGDVITARVRADDLSSDTELGQARSYFHSASVLVGRTGSQLHDLQALAGKRVAVFGNTVEHRALSELVAKGIAVRPVVFSPGTPPAYLAEQLENWSVDAAIVDAHLIADLRAIHPLLEAGMSMPISYNYAWTTRAQNAGLLRAIDGFVRNAFTTDTYQILAQRYF---DQARYSYIGGLARLSPYDNLVRHYADTYNFDWRLIVAQMYFESQFNPGARSSGGALGLMQLTRSTARAMGVANPFDPDAGIRGGVRYLNKLRDHFEADLPPRERTWFALAAYNAGPARVDLARERAAAAGLDPTRWFGNVETMMGR----EPNQRAVGAYREAVDYVRAIRSLYNTY 1080
            LR++ LV  +D +++ WL +G GD++T R+ A  +  D     +R Y H ASVL+  T   +    AL G  VA +  +    AL E V +   V  V          L E++    +DA +++AH +         L AGMS+P  Y Y WT R ++  L+ A+D F+++ +  + Y +  +RY    D A+ S       +SP+D L++ YAD Y FDWRLI AQMY ES F+PGA S  GA+GLMQL  +TA ++G ANP DP++GI  G++YL  LR  F+  +P  +RTW ALAAYN G  RV  AR  A+ +GL+P +WFGNVE  M +    + N R      +A+ YVR+IRSLY  Y
Sbjct:  315 LRLDVLVGRDDDEIVNWLHNGVGDIVTTRIDARYIHGDPAFSISREYRHDASVLITTTARPIRSAAALRGTIVAGYEGSTHLAALQEFVNESSTVIGV--DRRVSMELLLERVAIGVIDAVVINAHRVNAALTTRGNLVAGMSIPNPYRYRWTLRGEDGPLMTAVDHFIQSDYRDEAYNVHERRYVHANDPAQRS----SDDISPFDGLLQSYADRYGFDWRLIAAQMYQESHFDPGAISRAGAIGLMQLMPATAESLGFANPHDPESGIHAGIKYLAHLRSRFDKRIPMDQRTWLALAAYNIGFDRVRRARALASESGLNPDKWFGNVEFAMRQMTRADQNSRVGCRCGQAIVYVRSIRSLYYAY 674          
BLAST of mRNA_P-wetherbeei_contig17130.2.1 vs. uniprot
Match: A0A3D5DG61_9GAMM (PBPb domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DG61_9GAMM)

HSP 1 Score: 251 bits (640), Expect = 2.000e-73
Identity = 148/369 (40.11%), Postives = 207/369 (56.10%), Query Frame = 1
Query:    4 LRVEYLVADNDQQMLEWLRSGAGDVITARVRADDLSSDTELGQARSYFHSASVLVGRTGSQLHDLQALAGKRVAVF-GNTVEHRALSELVAKGIAV---RPVVFSPGTPPAYLAEQLENWSVDAAIVDAHLIADLRAIHPLLEAGMSMPISYNYAWTTRAQNAGLLRAIDGFVRNAFTTDTYQILAQRYFDQARYSYIGGLARLSPYDNLVRHYADTYNFDWRLIVAQMYFESQFNPGARSSGGALGLMQLTRSTARAMGVANPFDPDAGIRGGVRYLNKLRDHFEADLPPRERTWFALAAYNAGPARVDLARERAAAAGLDPTRWFGNVETMMGR------EPNQRAVGAYREAVDYVRAIRSLYNTY 1080
            LR+E LV   D+Q+L+WLRSGAGD+IT R+    L    EL  +R Y H A+VL+      +     + GK +A + G++    A   L   G  +   R V  S       L +++E+ ++DAA++  H I  +  +     +G+S+P  Y Y WT R  +  +   I+ F+++ +   TY IL +RY  +        L  LSP+D L++ Y+  Y+FDWRLI AQMY ESQFNP A S  GALGLMQ+   TA  +G+ NP DP+AGI  G++YL+ LR+ F+  +P  ERTW ALAAYN G   V  AR RA   GL+P +WFGNVE  M +      E N        +A+ YV +IRSLY  Y
Sbjct:  326 LRLEVLVGHEDEQILKWLRSGAGDLITTRIHESLLRDSAELSVSRDYRHDAAVLISSATRPIQSKADIIGKFIAGYEGSSTIAAAKDFLDGSGTVIAVDRRVSLS------LLIDRIESGTIDAAVIAGHQIKSVLDLSRGAISGLSIPNPYRYRWTLRGDSPQMAVEIEKFIQDEYREGTYNILERRYVAEES-ELQPTLTDLSPFDELLQTYSALYDFDWRLIAAQMYQESQFNPEAVSRNGALGLMQIMPETAVGLGLQNPNDPEAGIHAGIKYLDWLRNRFDNHIPMDERTWLALAAYNIGYEHVRRARTRARKIGLNPDKWFGNVEVAMRQMTRSYWESNSLKGCRCGQAIIYVSSIRSLYYAY 687          
BLAST of mRNA_P-wetherbeei_contig17130.2.1 vs. uniprot
Match: A0A1G0JBF6_9GAMM (PBPb domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15 TaxID=1798298 RepID=A0A1G0JBF6_9GAMM)

HSP 1 Score: 222 bits (566), Expect = 7.390e-63
Identity = 133/372 (35.75%), Postives = 202/372 (54.30%), Query Frame = 1
Query:    4 LRVEYLVADNDQQMLEWLRSGAGDVITARVRADDLSSDTELGQARSYFHSASVLVGRT-GSQLHDLQALAGKRVAVFGNTVEHRALSELVAKGIAVRPVVFSPGTPPAYLAEQLENWSVDAAIVDAHLIADLRAIHPLLEAGMSMPISYNYAWTTRAQNAGLLRAIDGFVRNAFTTDTYQILAQRYFDQA-----RYSYIGGLARLSPYDNLVRHYADTYNFDWRLIVAQMYFESQFNPGARSSGGALGLMQLTRSTARAMGVANPFDPDAGIRGGVRYLNKLRDHFEADLPPRERTWFALAAYNAGPARVDLARERAAAAGLDPTRWFGNVET--MMGREPNQRAVGAYR-----EAVDYVRAIRSLYNTY 1080
            +R++ ++ ++ ++M E LR G GD+I A +  D+   +  +  +R Y +SA V+VGR   S L DL+ LAG+ + +   +   ++L  +   GI V   + +          ++     D  ++ +H +    A H  L+A   +     +AW  R+ +  L  AI+ F++  +    Y  L  RY +         S +    RLSPYD++V  YA+ Y+FDWRLIVAQMY ES+FNP A S  GA GLMQL   T   + + +P DPDAGI GG+RYL+ LRD FE ++P  ++TWFAL AYNAG  R++ AR+ A    LD   WF NVE   ++  +P Q+     R     +   YVR I++LY+ Y
Sbjct:  310 MRLDVVLCNSMEEMKELLRQGRGDIIAASLPYDEQPQEAGISYSRPYNYSAPVIVGRVYDSPLLDLRDLAGREIVLPPESPYLQSLQGIKDLGIDVGLKIAAGDNNMEATLMKVAAGDYDLTVISSHQLRAETAQHANLKAHFVLTDPTPHAWAVRSSDPLLQAAINRFLQREYRMSLYNDLYARYIENPGEHHDENSLLAAYDRLSPYDDIVHKYAEMYDFDWRLIVAQMYQESRFNPVAVSQAGAAGLMQLAPETVALLAIGDPTDPDAGIHGGIRYLDSLRDRFEDEIPGDDKTWFALGAYNAGFNRIEQARDLAEKMQLDRNLWFNNVEQALLVMAKPKQQEGELLRLCRCGQTAYYVREIKTLYSNY 681          
BLAST of mRNA_P-wetherbeei_contig17130.2.1 vs. uniprot
Match: A0A523KFQ8_9GAMM (Transporter substrate-binding domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523KFQ8_9GAMM)

HSP 1 Score: 218 bits (556), Expect = 2.960e-61
Identity = 141/383 (36.81%), Postives = 211/383 (55.09%), Query Frame = 1
Query:    1 RLRVEYLVADNDQQMLEWLRSGAGDVITARVRADDLSSDTELGQARSYFHSASVLVGR-TGSQLHDLQALAGKRVAVFGNTVEHRALSELVAKGIAVRPVVFSPGTPPAYLAEQLENWSVDAAIVDAHLI-ADLR---AIHPLLEAGMSMPISYNYAWTTRAQNAGLLRAIDGFVRNAFTTDTYQILAQRYFDQARYSYIGG-----LARLSPYDNLVRHYADTYNFDWRLIVAQMYFESQFNPGARSSGGALGLMQLTRSTARAMGVANPFDPDAGIRGGVRYLNKLRDHFEADLPPRERTWFALAAYNAGPARVDLARERAAAAGLDPTRWFGNVETMMGR-------EPNQRAVGAYREAVDYVRAIRSLYNTYNRQHES 1098
            ++ V+ ++A + ++M E L SG GD+I A +  + L  D  +    +Y +SA V++GR T   L D++ L G+R+A+   +     L  +  +GI    +    G        ++ +   D  I+  H + A+L     + PL    +S P+  +  W  RA +  LL A++ +++  +  DTY +L  +Y  + +    G      + +LSPYD +V+  A+ ++FDWRLIVAQMY ESQF+P A S  GA GLMQL  +TARA+GV +  DP   I  GV+Y++ LRD FE +LP  ++TWF LA+YNAG  RV  AR  A   GLD  RWFGNVE  M +       +   R +    +AV YV+ IRSLYN Y R  E+
Sbjct:  328 KMNVDVVLASSHEEMRELLLSGDGDIIAASLPENSLH-DENIKMTIAYNYSAPVIIGRDTEKSLVDIRDLEGRRIALAPESPYRSLLEGIQQRGIDFEIIDTDEGVNVEETLYRVSHAMHDLTILGGHQVKAELTQQYGLKPLFT--LSEPVGQS--WAVRASDHKLLSAVNDYIKQEYRGDTYNVLYSKYLSRPKNRRAGTRLLTHVDKLSPYDEIVKKNAEQHSFDWRLIVAQMYQESQFDPAAVSYAGAEGLMQLMPATARALGVEDVNDPTLNITAGVKYMSILRDQFEQELPLEDKTWFTLASYNAGFTRVKKARLLAEKMGLDSDRWFGNVEKAMLKLSKPYIQDGEVRRLCRCGQAVVYVQDIRSLYNNYVRLTET 705          
BLAST of mRNA_P-wetherbeei_contig17130.2.1 vs. uniprot
Match: A0A661CEU2_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661CEU2_9GAMM)

HSP 1 Score: 216 bits (549), Expect = 2.260e-60
Identity = 139/381 (36.48%), Postives = 209/381 (54.86%), Query Frame = 1
Query:    1 RLRVEYLVADNDQQMLEWLRSGAGDVITARVRADDLSSDTELGQARSYFHSASVLVGR-TGSQLHDLQALAGKRVAVFGNTVEHRALSELVAKGIAVRPVVFSPGTPPAYLAEQLENWSVDAAIVDAHLI-ADLRAIHPLLEA-GMSMPISYNYAWTTRAQNAGLLRAIDGFVRNAFTTDTYQILAQRYFDQ-----ARYSYIGGLARLSPYDNLVRHYADTYNFDWRLIVAQMYFESQFNPGARSSGGALGLMQLTRSTARAMGVANPFDPDAGIRGGVRYLNKLRDHFEADLPPRERTWFALAAYNAGPARVDLARERAAAAGLDPTRWFGNVETMM-------GREPNQRAVGAYREAVDYVRAIRSLYNTYNRQHES 1098
            RL V+ ++A++ +QM E L SG GD+I A +  + L+ D  +    +Y +SA V++GR T + L D++ L G+R+A+   +     L  +  +GI    V    G        ++ +   D  I+ +H + A+L   + L     +S P++ +  W  R  +  LLRA++ ++   +  DTY  L  +Y  +     A    +  + +LSPYD L++  A+ ++FDWRLI AQMY ES F+P A S  GA GLMQ+  +TA  +G+ + +DP + I  GV+Y+  LRD FE +LP  ++TWF LA+YNAG  RV  AR  A   GLD  RWFGNVE  M         E   R +    +AV YVR IRSLY+ Y R  E+
Sbjct:  315 RLSVDVVLANSHEQMRELLLSGEGDIIAASLPENSLA-DENIKMTSAYDYSAPVIIGRDTENSLVDIRDLEGRRIALAPESPYRDFLQGIQRRGINFEIVDTDEGVNTEETLYRVSHAMHDLTILGSHQVKAELTRQYGLKALFALSEPVAQS--WAVRVSDHKLLRAVNDYIEKEYRRDTYNALYSKYLSRPKNIKAESKLVALVDKLSPYDELLKVNAERHSFDWRLIAAQMYQESHFDPEAVSYAGAEGLMQIMPATANELGLEDIYDPKSNISAGVKYMKILRDQFEQELPLEDKTWFTLASYNAGFTRVKNARALAEKMGLDRDRWFGNVEKAMLALSRPYTEEGEVRRLCHCGQAVVYVREIRSLYHNYVRLTET 692          
BLAST of mRNA_P-wetherbeei_contig17130.2.1 vs. uniprot
Match: A0A545U8E7_9GAMM (Transporter substrate-binding domain-containing protein n=1 Tax=Exilibacterium tricleocarpae TaxID=2591008 RepID=A0A545U8E7_9GAMM)

HSP 1 Score: 209 bits (531), Expect = 9.170e-58
Identity = 144/381 (37.80%), Postives = 190/381 (49.87%), Query Frame = 1
Query:    1 RLRVEYLVADNDQQMLEWLRSGAGDVITARVRADDLSSDTELGQARSYFHSASVLVGRTGSQ---LHDLQALAGKRVAVFGNTVEHRALSELVAKGIAVRPVVFSPGTPPAYLAEQ-----LENWSVDAAIVDAHLIADLRAIHPLLEAGMSMPISYNYAWTTRAQNAGLLRAIDGFVRNAFTTDTYQILAQRYFDQAR--YSYIGGLAR----LSPYDNLVRHYADTYNFDWRLIVAQMYFESQFNPGARSSGGALGLMQLTRSTARAMGVANPFDPDAGIRGGVRYLNKLRDHFEADLPPRERTWFALAAYNAGPARVDLARERAAAAGLDPTRWFGNVETMM----GREPNQRAVGAY---REAVDYVRAIRSLYNTY 1080
            +L++E +VA  +  M++WL  G GD+I A        S  +L   R Y      LV  TGS    L  L  L G+ + V  NT   +  +  + +G       F+    PA++        + N S DA + D+HL+A        L+ G  +     +AW  R  N  LL A++ +++       + +   +YF   +    Y G        LSPYD++VR  A  Y  DWRLIVAQMY ES+F+P A S  GA GL+Q+   TAR MG   PF   +GI  GV+YLN +RD FEA LP  ER WF LAAYNAG   V  AR  A   GLDP RWF NVET M     +E   +A   Y   RE V+YVR IR  Y  Y
Sbjct:  336 QLKLEVVVAPPEADMIDWLNQGRGDLIAASFTVTPARSRRDLTFTRPYNTVGEQLV--TGSDRPALQTLDNLQGRTLVVRKNTAYWQTATTWLQQGHQ-----FTLQAAPAHMNTDELLIGVANGSFDATLADSHLVAIEHRFVDGLQPGFVVQPERQHAWAVRKDNPELLAALNSYLKKHHRGLFFNVTYNKYFKNPKRIQKYQGQRLNRDGALSPYDDVVRAAARAYQLDWRLIVAQMYQESRFDPDAESFAGAQGLLQVMPRTARQMGYEVPFSVHSGIHAGVQYLNWVRDRFEAHLPLEERLWFTLAAYNAGYGHVYDARRLARQKGLDPDRWFDNVETTMLLLSKQEYASKARFGYVRGREPVNYVRGIRERYRAY 709          
BLAST of mRNA_P-wetherbeei_contig17130.2.1 vs. uniprot
Match: A0A6N1DU79_9GAMM (Transporter substrate-binding domain-containing protein n=1 Tax=Ectothiorhodospiraceae bacterium 2226 TaxID=2740164 RepID=A0A6N1DU79_9GAMM)

HSP 1 Score: 208 bits (530), Expect = 1.000e-57
Identity = 137/384 (35.68%), Postives = 192/384 (50.00%), Query Frame = 1
Query:    4 LRVEYLVADNDQQMLEWLRSGAGDVITARVRADDLSSDTELGQARSYFHSASVLVGRTGSQ-LHDLQALAGKRVAVFGNTVEHRALSELVAKGIAVRPVVFSPGTPPAYLAEQLENWSVDAAIVDAHLIA-------DLRAIHPLLEAGMSMPISYNYAWTTRAQNAGLLRAIDGFVRNAFTTDTYQILAQRYF--DQARYSYIG------GLARLSPYDNLVRHYADTYNFDWRLIVAQMYFESQFNPGARSSGGALGLMQLTRSTARAMGVANPFDPDAGIRGGVRYLNKLRDHFEADLPPRERTWFALAAYNAGPARVDLARERAAAAGLDPTRWFGNVETMM----GREPNQRAVGAY---REAVDYVRAIRSLYNTYNR 1086
            LR+  +V  +   + +W+R G  D+  A +          +  +R Y     +LV R     +     LAG+ V V  N+   R LS L   G A   V  +       + +++     D  + D+H++        D+RA   L E G        + W  RA N  L+ A++GF+R  +    Y +   +YF  D+   +++G        A LSPYD LVR YA+ Y FDWRL+VAQMY ES+F+P ARS  GALGLMQ+   T R +G  +  DPD+GI  GV+Y++ L   FE +L   +RTWFALAAYNAG   V  AR  AA  G    +WF NVE  M     RE ++ A   Y   +E V+YVR IR  +  Y R
Sbjct:  315 LRLAVVVPPSHAALRDWVRDGHADLAAASLTISAEGGGEGMVFSRPYHRVTELLVTRADDLGIQSADDLAGRTVVVRRNSSYWRTLSALREAGYAFELVAAAEDLETEQIIDRVGRGEYDLTVADSHIVEIEQTYRDDIRAAFALTEEGA-------HGWLMRADNPQLVEAVNGFLRREYRGVFYNLTRAKYFGNDRTIQAHVGERVDGASAAALSPYDELVRRYAERYGFDWRLVVAQMYQESRFDPAARSWAGALGLMQVLPRTGRELGFDDLHDPDSGIHAGVQYMDWLMRRFEPELNMADRTWFALAAYNAGIGHVRDARRLAAQKGWASDQWFDNVEHAMLLLAQREYHRHAAHGYVRGQEPVNYVRHIRDRFEAYAR 691          
BLAST of mRNA_P-wetherbeei_contig17130.2.1 vs. uniprot
Match: A0A7K4EPZ5_9EURY (Transporter substrate-binding domain-containing protein n=1 Tax=Halobacteria archaeon TaxID=2670410 RepID=A0A7K4EPZ5_9EURY)

HSP 1 Score: 208 bits (529), Expect = 2.190e-57
Identity = 147/380 (38.68%), Postives = 189/380 (49.74%), Query Frame = 1
Query:    4 LRVEYLVADNDQQMLEWLRSGAGDVITARVRADDLSSDTELGQ--ARSYFHSASVLVGRTGSQLHDLQALAGKRVAVFGNTVEHRALSELVAKGIAVRPVVFSPGTPPAYLAEQLENWSVDAAIVDAHL----IADLRAIHPLLEAGMSMPISYNYAWTTRAQNAGLLRAIDGFVRNAFTTDTYQILAQRYFDQAR------YSYIGGL--ARLSPYDNLVRHYADTYNFDWRLIVAQMYFESQFNPGARSSGGALGLMQLTRSTARAMGVANPFDPDAGIRGGVRYLNKLRDHFEADLPPRERTWFALAAYNAGPARVDLARERAAAAGLDPTRWFGNVETMM---GR-EPNQRAVGAY---REAVDYVRAIRSLYNTY 1080
            LR+E +V D  QQMLEWL  G  DV +  +   D  SD +LG   ++ Y  + +  + R    L DL  L G+ V V  ++     L +L + G     V          +  Q+    +D  + D HL    IA    I P    G   P S       R  N  LL AI+ F+R       Y IL ++YF   R        Y  GL   RLSPYD++ R YAD Y FDWRL+ AQMY ES+F+P A S  GA GL+Q+   TA+ MG     DPD GI  G++YL+ +RD F+ DL   +R WF LAAYNAG   V  AR  A   G DP RWFG+ E  M   GR E  ++A   Y   RE V+YV  IRS +  Y
Sbjct:  323 LRLEVVVPDTHQQMLEWLTEGRADVASGFLVPRD--SDRQLGIEFSKPYHRAFAHFIVRDDDPLADLDGLDGRTVVVRQSSGHWDRLQQLRSAGHDFTLVAAPEDLETEDIIHQVAGGEIDITVADEHLMDIEIAQDVNIRPAFSFGEEQPHSV----AVRKGNEKLLAAINSFIRQENKGLLYNILYKKYFRNKRGIRKLARGYEEGLETGRLSPYDDITRRYADRYGFDWRLVTAQMYQESRFDPQATSFAGARGLLQVMPKTAKQMGFRELDDPDKGIHAGIKYLDWVRDRFDDDLGFADRMWFTLAAYNAGYGHVADARRLAVKKGWDPDRWFGHTEKAMLLLGRKEYARKAKHGYVRGREPVNYVTNIRSRFRAY 696          
BLAST of mRNA_P-wetherbeei_contig17130.2.1 vs. uniprot
Match: A0A0S7ZWV1_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium SG8_15 TaxID=1703403 RepID=A0A0S7ZWV1_9GAMM)

HSP 1 Score: 207 bits (526), Expect = 4.130e-57
Identity = 124/375 (33.07%), Postives = 196/375 (52.27%), Query Frame = 1
Query:    4 LRVEYLVADNDQQMLEWLRSGAGDVITARVRADDLSSDTELGQARSYFHSASVLVGRTGS-QLHDLQALAGKRVAVFGNTVEHRALSELVAKGIAVRPVVFSPGTPPAYLAEQLENWSVDAAIVDAHLIADLRAIHPLLEAGMSMPISYNYAWTTRAQNAGLLRAIDGFVRNAFTTDTYQILAQRYFDQARYSYI--------GGLARLSPYDNLVRHYADTYNFDWRLIVAQMYFESQFNPGARSSGGALGLMQLTRSTARAMGVANPFDPDAGIRGGVRYLNKLRDHFEADLPPRERTWFALAAYNAGPARVDLARERAAAAGLDPTRWFGNVETMM----GREPNQRAVGAY---REAVDYVRAIRSLYNTY 1080
            LR+E +V  +   + +WL  G GD+I A +     + + +L  +R+Y     ++VGR    ++ ++  L G+   V  ++   R L+EL   G A++  +         +  ++ +   D  + D++++         ++  +++    ++AW  R     LL A++ ++R  +  + Y I  ++YF++ +            G   RLSPYD+  ++YA+ YNFDWR+IVAQMY ES+F+P A+S  GA GLMQ+   TA  +G+ N  DP   +  GV+YL+ LRD FE +L  ++R WF LAAYNAG   V  AR  A   G +  RWFGNVE  M     RE  + A   Y    E V YVR IR  Y+ Y
Sbjct:  319 LRLEMIVVPSRDLLTQWLLEGKGDMIAASISVPKTNDNDQLRYSRAYDKVYEIVVGRAKEDEVENVNQLRGRSFHVRKSSSYWRTLTELNKNGAALKIKLVPEHEETEEIIAKVASGEYDLTLADSNILDIEMTWRDDIKGVLNLGEEVSHAWVVRDDAPKLLEAVNQYIRKEYRGEFYNITRRKYFEKPKTIKKRLEERVDRGSNGRLSPYDDFAKNYAEKYNFDWRMIVAQMYQESRFDPNAKSWAGARGLMQVMPRTASQLGIKNLKDPKNSVEAGVKYLDWLRDRFEPELSVKDRMWFTLAAYNAGAGHVHDARTLARKKGWESNRWFGNVERAMLLLSKREYAKTAKHGYVRGGEPVKYVREIRDRYDAY 693          
BLAST of mRNA_P-wetherbeei_contig17130.2.1 vs. uniprot
Match: G4E5H4_9GAMM (Lytic transglycosylase catalytic n=2 Tax=Thiorhodospira sibirica TaxID=154347 RepID=G4E5H4_9GAMM)

HSP 1 Score: 206 bits (525), Expect = 5.980e-57
Identity = 137/377 (36.34%), Postives = 200/377 (53.05%), Query Frame = 1
Query:    4 LRVEYLVADND-QQMLEWLRSGAGDVITARVRADDLSSDTELGQARSYFHSASVLVGRTGSQ-LHDLQALAGKRVAVFGNTVEHRALSELVAKGIAVRPVVFSPGTPPAYLAEQLENWSVDAAIVDAHLIADLRAIHPLLEAGMSMPISYNYAWTTRAQNAGLLRAIDGFVRNAFTTDTYQILAQRYFD---QARYSYIGGLA----RLSPYDNLVRHYADTYNFDWRLIVAQMYFESQFNPGARSSGGALGLMQLTRSTARAMGVANPFDPDAGIRGGVRYLNKLRDHFEADLPPRERTWFALAAYNAGPARVDLARERAAAAGLDPTRWFGNVET--MMGREPNQRAVGAY-----REAVDYVRAIRSLYNTYNR 1086
            +R+E +V   D +Q L+WL  G  D+    ++A D +   +L     + ++   L+ R+ +  L D   L G+R+AV  N+     LS+L A   A+    F P    + L + L     D A++D HL++   A    L+   S+     + W    +N  LL A++ F    +    Y +L ++YF+   + R  +  GLA    R SP+D L+R YA  Y+FDWRLIVAQMY ES+F+P ARS  GA+GLMQL  +TAR +G+    DP+  I+ G+RY++ +R  F  DLP  +R WF LAAYNAG   V  AR  A A G D  RWF +VE   ++  +P   A   Y      E V+YV  IR+ Y+ Y R
Sbjct:  317 MRLEVVVPPVDLEQPLDWLHEGIVDIAAGFLKACDAAEHPQLQATHPFHYAQPYLLSRSDADALTDWDDLNGRRIAVLENSASLDNLSQL-ASIHALSLHRFPPPEDASTLVDLLAAGEYDYAVLDEHLLSMELARRDDLKRQFSVGEPTAHVWLVHTENTQLLEALNEFFLQEYRGTFYNLLHRKYFNNPPRLRQMHDEGLAFGEGRFSPWDELIRSYAREYDFDWRLIVAQMYQESRFDPVARSPMGAVGLMQLMPATARQVGLTRMEDPEENIKAGIRYMDWIRQRFPEDLPVADRMWFTLAAYNAGTGHVMDARRLAEAKGWDRNRWFDHVEKAILLLAQPQYAAQARYGYVRGTEPVNYVADIRARYSAYVR 692          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17130.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A523NQ72_9PROT1.280e-7639.89Transporter substrate-binding domain-containing pr... [more]
A0A3D5DG61_9GAMM2.000e-7340.11PBPb domain-containing protein n=1 Tax=Gammaproteo... [more]
A0A1G0JBF6_9GAMM7.390e-6335.75PBPb domain-containing protein n=1 Tax=Gammaproteo... [more]
A0A523KFQ8_9GAMM2.960e-6136.81Transporter substrate-binding domain-containing pr... [more]
A0A661CEU2_9GAMM2.260e-6036.48Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A545U8E7_9GAMM9.170e-5837.80Transporter substrate-binding domain-containing pr... [more]
A0A6N1DU79_9GAMM1.000e-5735.68Transporter substrate-binding domain-containing pr... [more]
A0A7K4EPZ5_9EURY2.190e-5738.68Transporter substrate-binding domain-containing pr... [more]
A0A0S7ZWV1_9GAMM4.130e-5733.07Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
G4E5H4_9GAMM5.980e-5736.34Lytic transglycosylase catalytic n=2 Tax=Thiorhodo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17130contigP-wetherbeei_contig17130:360..1457 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog765914.ThisiDRAFT_1553
PFAMsSBP_bac_3,SLT
Model size1098
Max annot lvl135613|Chromatiales
KEGG koko:K18691
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.81e-58
EggNOG OGsCOG0834@1|root,COG4623@1|root,COG0834@2|Bacteria,COG4623@2|Bacteria,1MWDS@1224|Proteobacteria,1RM8W@1236|Gammaproteobacteria,1WXYV@135613|Chromatiales
DescriptionMurein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella
Cds size1098
COG categoryM
BRITEko00000,ko01000,ko01011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186108.9320147-CDS-P-wetherbeei_contig17130:359..14571683186108.9320147-CDS-P-wetherbeei_contig17130:359..1457Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17130 360..1457 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17130.2.1prot_P-wetherbeei_contig17130.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17130 360..1457 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17130.2.1

>prot_P-wetherbeei_contig17130.2.1 ID=prot_P-wetherbeei_contig17130.2.1|Name=mRNA_P-wetherbeei_contig17130.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=366bp
RLRVEYLVADNDQQMLEWLRSGAGDVITARVRADDLSSDTELGQARSYFH
SASVLVGRTGSQLHDLQALAGKRVAVFGNTVEHRALSELVAKGIAVRPVV
FSPGTPPAYLAEQLENWSVDAAIVDAHLIADLRAIHPLLEAGMSMPISYN
YAWTTRAQNAGLLRAIDGFVRNAFTTDTYQILAQRYFDQARYSYIGGLAR
LSPYDNLVRHYADTYNFDWRLIVAQMYFESQFNPGARSSGGALGLMQLTR
STARAMGVANPFDPDAGIRGGVRYLNKLRDHFEADLPPRERTWFALAAYN
AGPARVDLARERAAAAGLDPTRWFGNVETMMGREPNQRAVGAYREAVDYV
RAIRSLYNTYNRQHES
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mRNA from alignment at P-wetherbeei_contig17130:360..1457-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17130.2.1 ID=mRNA_P-wetherbeei_contig17130.2.1|Name=mRNA_P-wetherbeei_contig17130.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1098bp|location=Sequence derived from alignment at P-wetherbeei_contig17130:360..1457- (Phaeothamnion wetherbeei SAG_119_79)
CGGCTGCGGGTCGAATACCTTGTGGCCGACAACGACCAGCAGATGCTGGA ATGGCTGCGCAGCGGCGCTGGCGATGTGATTACCGCCCGCGTGCGGGCGG ACGACCTCAGTAGCGACACCGAGCTCGGCCAGGCGCGCAGCTACTTTCAT TCGGCCTCGGTGCTGGTCGGTCGCACCGGCAGCCAGCTCCATGATCTGCA GGCGCTGGCCGGCAAGCGCGTCGCCGTGTTCGGCAATACCGTTGAGCACC GCGCCTTGTCGGAACTGGTCGCCAAGGGCATCGCGGTGCGGCCGGTGGTC TTCAGTCCCGGTACGCCGCCGGCCTATCTCGCCGAGCAGCTTGAAAACTG GTCCGTGGATGCGGCCATCGTCGATGCCCATCTGATCGCCGACCTGCGCG CCATACATCCGCTGCTGGAAGCCGGCATGTCGATGCCTATCTCGTATAAC TATGCGTGGACGACACGGGCGCAAAACGCCGGCCTGCTGCGCGCCATCGA TGGCTTCGTGCGCAATGCGTTCACCACCGACACCTATCAAATCCTCGCCC AGCGCTATTTCGACCAGGCGCGTTACTCATATATAGGCGGCCTCGCGCGG CTCTCGCCCTACGACAATCTGGTGCGTCATTACGCCGATACCTACAACTT CGACTGGCGCCTGATCGTCGCGCAGATGTATTTCGAGAGCCAGTTCAATC CCGGTGCCCGCTCGTCAGGTGGTGCGCTGGGCCTCATGCAGTTGACCCGC AGCACCGCGCGCGCGATGGGCGTGGCCAATCCCTTTGATCCCGATGCCGG GATACGCGGCGGCGTGCGCTATCTGAACAAGTTGCGCGACCATTTTGAAG CAGATCTGCCACCTCGCGAGCGCACCTGGTTTGCACTCGCGGCTTATAAC GCAGGACCGGCGCGGGTTGATTTGGCGCGCGAACGGGCCGCGGCCGCCGG CCTGGACCCGACCCGCTGGTTCGGCAACGTGGAAACCATGATGGGCCGCG AGCCCAATCAGCGCGCAGTCGGCGCCTATCGCGAAGCAGTAGATTACGTG CGCGCCATCCGCTCGCTATACAACACCTATAACCGCCAGCATGAATCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17130:360..1457-

>mRNA_P-wetherbeei_contig17130.2.1 ID=mRNA_P-wetherbeei_contig17130.2.1|Name=mRNA_P-wetherbeei_contig17130.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1098bp|location=Sequence derived from alignment at P-wetherbeei_contig17130:360..1457- (Phaeothamnion wetherbeei SAG_119_79)
CGGCTGCGGGTCGAATACCTTGTGGCCGACAACGACCAGCAGATGCTGGA
ATGGCTGCGCAGCGGCGCTGGCGATGTGATTACCGCCCGCGTGCGGGCGG
ACGACCTCAGTAGCGACACCGAGCTCGGCCAGGCGCGCAGCTACTTTCAT
TCGGCCTCGGTGCTGGTCGGTCGCACCGGCAGCCAGCTCCATGATCTGCA
GGCGCTGGCCGGCAAGCGCGTCGCCGTGTTCGGCAATACCGTTGAGCACC
GCGCCTTGTCGGAACTGGTCGCCAAGGGCATCGCGGTGCGGCCGGTGGTC
TTCAGTCCCGGTACGCCGCCGGCCTATCTCGCCGAGCAGCTTGAAAACTG
GTCCGTGGATGCGGCCATCGTCGATGCCCATCTGATCGCCGACCTGCGCG
CCATACATCCGCTGCTGGAAGCCGGCATGTCGATGCCTATCTCGTATAAC
TATGCGTGGACGACACGGGCGCAAAACGCCGGCCTGCTGCGCGCCATCGA
TGGCTTCGTGCGCAATGCGTTCACCACCGACACCTATCAAATCCTCGCCC
AGCGCTATTTCGACCAGGCGCGTTACTCATATATAGGCGGCCTCGCGCGG
CTCTCGCCCTACGACAATCTGGTGCGTCATTACGCCGATACCTACAACTT
CGACTGGCGCCTGATCGTCGCGCAGATGTATTTCGAGAGCCAGTTCAATC
CCGGTGCCCGCTCGTCAGGTGGTGCGCTGGGCCTCATGCAGTTGACCCGC
AGCACCGCGCGCGCGATGGGCGTGGCCAATCCCTTTGATCCCGATGCCGG
GATACGCGGCGGCGTGCGCTATCTGAACAAGTTGCGCGACCATTTTGAAG
CAGATCTGCCACCTCGCGAGCGCACCTGGTTTGCACTCGCGGCTTATAAC
GCAGGACCGGCGCGGGTTGATTTGGCGCGCGAACGGGCCGCGGCCGCCGG
CCTGGACCCGACCCGCTGGTTCGGCAACGTGGAAACCATGATGGGCCGCG
AGCCCAATCAGCGCGCAGTCGGCGCCTATCGCGAAGCAGTAGATTACGTG
CGCGCCATCCGCTCGCTATACAACACCTATAACCGCCAGCATGAATCC
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