mRNA_P-wetherbeei_contig1713.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1713.2.1
Unique NamemRNA_P-wetherbeei_contig1713.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1713.2.1 vs. uniprot
Match: A0A3C0TX97_9PROT (Methyltransf_21 domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TX97_9PROT)

HSP 1 Score: 375 bits (962), Expect = 4.210e-129
Identity = 177/257 (68.87%), Postives = 210/257 (81.71%), Query Frame = 1
Query:    4 PETWAMIELPGSLKLWIDLGDKYVSLGCLAGAYERDETTFILNTVKQGQTFVDIGANIGWFAVQAAKNVGPGGKVIAIEPRAVTGKYLAQSLQANGFTDCAEVHHCAVGAEAGRFNIAWDGKAGNPGGTWSLPDEKMAQDFRDIGHCVESVEVRTLDSIVANRKIDVIKIDIEGAEGLALRGATQTLAQSRPVIMSEMNFSLLPKISGVSAGDFVRWMAQQGYHCHALDAGRIGPALHADNLPGHLLFINVIFQPAS 774
            P+TWAM+ELPG L LWIDLGD  VSLGCL+G YE +ET FIL  VK+G TFVDIGANIGWFAVQAA  VGP G+VIAIEPRA T +YL +S++ N F D AE+HHCA GAEAGRF+I W+  AGNPGGTWSLPD  +AQ+FR++GH VE VEVRTLDSI+A R +DVIKIDIEGAEG+ALRGA  T+AQSRP+I+SE+NF+LLPKISG+SAGD+VRWM  +GY CHAL+ G  G  L AD+LP H + +N +F P S
Sbjct:    2 PDTWAMVELPGGLLLWIDLGDSGVSLGCLSGMYEGEETAFILGAVKEGGTFVDIGANIGWFAVQAASKVGPRGRVIAIEPRARTCQYLTRSMETNKFLDRAELHHCAAGAEAGRFSIGWNAMAGNPGGTWSLPDAGLAQEFREMGHEVEEVEVRTLDSIIAGRHVDVIKIDIEGAEGIALRGAEMTIAQSRPIILSEINFTLLPKISGLSAGDYVRWMEAKGYRCHALEGGAPGAVLQADHLPTHKVLVNAVFLPVS 258          
BLAST of mRNA_P-wetherbeei_contig1713.2.1 vs. uniprot
Match: UPI0015698349 (FkbM family methyltransferase n=1 Tax=Ensifer adhaerens TaxID=106592 RepID=UPI0015698349)

HSP 1 Score: 222 bits (565), Expect = 9.270e-68
Identity = 116/256 (45.31%), Postives = 156/256 (60.94%), Query Frame = 1
Query:    1 PPETWAMIELPGSLKLWIDLGDKYVSLGCLAGAYERDETTFILNTVKQGQTFVDIGANIGWFAVQAAKNVGPGGKVIAIEPRAVTGKYLAQSLQANGFTDCAEVHHCAVGAEAGRFNIAWDGKAGNPGGTWSLPDEKMAQDFRDIGHCVESVEVRTLDSIVANRKIDVIKIDIEGAEGLALRGATQTLAQSRPVIMSEMNFSLLPKISGVSAGDFVRWMAQQGYHCHALDAGRIGPALHADNLPGHLLFINVIFQP 768
            PP +W   ++ G L L +D+GD+ VS  C+ G YE  ET F+  +VK G TFVDIGANIGWF+ +AA+ VG  GKVI+ EPR  T K L +S+  NGF    E ++ A+G+E G   I W   + NPGGTW+LP+  + + FR+ G  ++   V TLD ++ +RK+D IKIDIEGAE LA  GA+  L  SRP+IMSE+N   L  +S  +   FV +M   GY C  L    IG     + LP +   INV+F P
Sbjct:   85 PPNSWVRAKVDGLL-LHVDVGDRGVSRNCVFGGYEPVETAFVDRSVKPGMTFVDIGANIGWFSTRAARLVGTEGKVISFEPREQTYKALCRSMHDNGFDAYFESYNAALGSEPGEMMIGWSHNSDNPGGTWTLPEGWLQEQFRNAGAELQPTPVLTLDDVIRDRKVDFIKIDIEGAEPLAFDGASNVLRSSRPLIMSELNPRALQAVSNRTPKGFVDYMKDHGYRCEHLTLEGIGAPYDGEELPNNYEMINVVFTP 339          
BLAST of mRNA_P-wetherbeei_contig1713.2.1 vs. uniprot
Match: A0A838XK19_9HYPH (FkbM family methyltransferase n=1 Tax=Stappia taiwanensis TaxID=992267 RepID=A0A838XK19_9HYPH)

HSP 1 Score: 175 bits (443), Expect = 8.430e-50
Identity = 104/257 (40.47%), Postives = 143/257 (55.64%), Query Frame = 1
Query:    4 PETWAMIEL-PGSLKLWIDLGDKYVSLGCLAGAYERDETTFILNTVKQGQTFVDIGANIGWFAVQAAKNVGPGGKVIAIEPRAVTGKYLAQSLQANGFTDCAEVHHCAVGAEAGRFNIAWDGKAGNPGGTWSLPDEKMAQDFRDIGHCVESVEVRTLDSIVANRKIDVIKIDIEGAEGLALRGATQTLAQSRPVIMSEMNFSLLPKISGVSAGDFVRWMAQQGYHCHALDAGRIGPAL--HADNLPGHLLFINVIFQ 765
            PE W   ++  G+ ++W+DLGDKYVS GCL   YE  E+ FI   VK GQ  +DIGANIGW  +   K VG  G V A EPR  T  YL ++L  N  +D   +H   +  E     +AW  K  NPGG++   +    Q   DI       ++R LDS+   R  D IKIDIEGAE  AL+G  + +A  +P+I+SE++   L  +SGVSA +++ +M   GY C  L+ GRIG  +  +  +LP  L   NV+F 
Sbjct:   58 PEKWVSTDVHAGAFRMWLDLGDKYVSFGCLMDNYEPLESGFIARNVKPGQNVLDIGANIGWHMLGLRKAVGADGSVWAFEPRRPTLDYLQRTLADNDLSDSVTIHPFGLWDEPRSAQLAWTEKTTNPGGSYVDAEGTSGQSKIDI-------DLRALDSLNLPRT-DFIKIDIEGAEPRALKGGARLIAAHKPLILSELHPDQLQNVSGVSAAEYIGYMKGFGYSCQLLEPGRIGETIDDYPSDLPRELT--NVVFS 304          
BLAST of mRNA_P-wetherbeei_contig1713.2.1 vs. uniprot
Match: A0A7L5ZAJ3_9CAUL (FkbM family methyltransferase n=1 Tax=Brevundimonas sp. TaxID=1871086 RepID=A0A7L5ZAJ3_9CAUL)

HSP 1 Score: 171 bits (433), Expect = 4.100e-49
Identity = 99/250 (39.60%), Postives = 137/250 (54.80%), Query Frame = 1
Query:   40 LKLWIDLGDKYVSLGCLAGAYERDETTFILNTVKQGQTFVDIGANIGWFAVQAAKNVGPGGKVIAIEPRAVTGKYLAQSLQANGFTDCAEVHHCAVGAEAGRFNIAWDGKAGNPGGTWSLPDEKM------AQDFRDIGHCVESVEVRTLDSIVANRKIDVIKIDIEGAEGLALRGATQTLAQSRPVIMSEMNFSLLPKISGVSAGDFVRWMAQQGYHCHALDAGRIGPALHADNLPGHLLFINVIFQPA 771
            L+LWIDL D  VS+GCLAG YE  ET F+L T+  G  FVDIGAN+GWF + AA  VG  G+V A EP ++T   L +S+  NGF D  ++H  A+G    R                +LP          A D    G   + V+VR LD++  +R++ +IK+D+EG+E L LRGA   +A+ RP+I++E+   LL  +SG  A  F R +   GY  HA+  G +G  +  D + G     NVI  PA
Sbjct:    7 LRLWIDLADTVVSMGCLAGNYEPQETRFVLQTLAPGDVFVDIGANLGWFTILAADRVGSAGQVHAFEPGSLTRGLLQRSVDDNGFGDRVQIHSVALGMRRDRGTCCR-----------TLPPVVTEGYMAPAGDAGSAGFAGQDVDVRPLDALAIDRRVKLIKMDVEGSEPLVLRGAQNLIARDRPLILAEVYDELLRLVSGTDAAGFRRQVRDMGYRIHAIRDGAVGEVVTDDAVIGIDRPANVILVPA 245          
BLAST of mRNA_P-wetherbeei_contig1713.2.1 vs. uniprot
Match: A0A2D5FLG4_9GAMM (Methyltransf_21 domain-containing protein n=2 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A2D5FLG4_9GAMM)

HSP 1 Score: 173 bits (439), Expect = 1.310e-47
Identity = 99/269 (36.80%), Postives = 148/269 (55.02%), Query Frame = 1
Query:    1 PPETWAMIELPGSLKLWIDLGDKYVSLGCLAGAYERDETTFILNTVKQGQTFVDIGANIGWFAVQAAKNVGPGGKVIAIEPRAVTGKYLAQSLQANGFTDCAEVHHCAVGAEAGRFNIAWDGKAGNPGGTWSLPDEKMAQDFRDIGHCVESVEVRTLDSIVANRKIDVIKID-------------IEGAEGLALRGATQTLAQSRPVIMSEMNFSLLPKISGVSAGDFVRWMAQQGYHCHALDAGRIGPALHADNLPGHLLFINVIFQP 768
            P  TW + E+   +++W+DLGD ++S  CL G +E DET F+ N ++    F+D+GANIGWF + AA+ VG  G+VIA EPR      LA S   N F    E H  A+G E G+  IA    A NPGGTWS+P+E++                 T+D      ++DV ++D             IEGAE LAL+G ++ L++ RP+I+SE+N   L  +S VS   ++ ++ + GY  H ++ GRIG  +  D +     +IN++F P
Sbjct:  219 PIGTWVIAEVSTGVRMWLDLGDLFISRYCLQGGFEADETRFVQNFLEADFCFIDVGANIGWFTLLAARLVGEKGRVIAFEPRPDLFARLAMSATENSFNQI-EAHQVALGQETGKMPIACKVAAANPGGTWSIPNERLRA---------------TIDETYEQFEVDVCRLDDFXXXXXXXXXXXIEGAEYLALKGGSRFLSELRPLILSEINPIPLNNVSEVSPIYYLNFIREFGYRAHRIEQGRIGREITDDEVMTLDHYINLVFVP 471          
BLAST of mRNA_P-wetherbeei_contig1713.2.1 vs. uniprot
Match: UPI001FE97A45 (FkbM family methyltransferase n=1 Tax=Roseomonas terrae TaxID=424799 RepID=UPI001FE97A45)

HSP 1 Score: 177 bits (448), Expect = 5.550e-47
Identity = 103/257 (40.08%), Postives = 146/257 (56.81%), Query Frame = 1
Query:   13 WAMIELPGSLKLWIDLGDKYVSLGCLAGAYERDETTFILNTVKQGQTFVDIGANIGWFAVQAAKNVGPGGKVIAIEPRAVTGKYLAQSLQANGFTDCAEVHHCAVGAEAGRFNIAWDGKAGNPGGTWSLPDEKMAQDFRDIGHCVESVEVRTLDSIVANRKIDVIKIDIEGAEGLALRGATQTLAQSRPVIMSEMNFSLLPKISGVSAGDFVRWMAQQGYHCHALDAGRIGPALHADN---LPGHLLFINVIFQPAS 774
            W   E+   LKLW+DL D  VSLGCL GA+E  ET FIL  ++ G  F+D+GANIGWF++ AA+ VGP G+V A EPRA   + L QS+  NGF +   +   A+GAE G   +AW     NPG ++ +P   M +    +G     V VR LD++     + +IKID+EGAE L LRGA   +A+ RPV++ E+    L ++SG +A   +  + + GY    L    IG  LHA +    PG   + N++   A+
Sbjct:   11 WVCAEIRDGLKLWLDLADHGVSLGCLRGAWEPAETDFILTVLEPGDGFIDVGANIGWFSILAAQAVGPQGRVHAFEPRADLSRRLRQSVADNGFDERCRIEAIALGAEEGAIELAWAPDERNPGHSFLVPGA-MPEGAVSLGR----VPVRPLDALGIEGPVRLIKIDVEGAEPLVLRGAQALIARDRPVLLVEVFPHWLSRVSGTTAEALLTQLREWGYRLFHLGESGIGRELHAGDDGTEPGGPDYFNLVALSAA 262          
BLAST of mRNA_P-wetherbeei_contig1713.2.1 vs. uniprot
Match: UPI001BA492F2 (FkbM family methyltransferase n=1 Tax=Roseomonas terrae TaxID=424799 RepID=UPI001BA492F2)

HSP 1 Score: 177 bits (448), Expect = 8.290e-47
Identity = 103/257 (40.08%), Postives = 146/257 (56.81%), Query Frame = 1
Query:   13 WAMIELPGSLKLWIDLGDKYVSLGCLAGAYERDETTFILNTVKQGQTFVDIGANIGWFAVQAAKNVGPGGKVIAIEPRAVTGKYLAQSLQANGFTDCAEVHHCAVGAEAGRFNIAWDGKAGNPGGTWSLPDEKMAQDFRDIGHCVESVEVRTLDSIVANRKIDVIKIDIEGAEGLALRGATQTLAQSRPVIMSEMNFSLLPKISGVSAGDFVRWMAQQGYHCHALDAGRIGPALHADN---LPGHLLFINVIFQPAS 774
            W   E+   LKLW+DL D  VSLGCL GA+E  ET FIL  ++ G  F+D+GANIGWF++ AA+ VGP G+V A EPRA   + L QS+  NGF +   +   A+GAE G   +AW     NPG ++ +P   M +    +G     V VR LD++     + +IKID+EGAE L LRGA   +A+ RPV++ E+    L ++SG +A   +  + + GY    L    IG  LHA +    PG   + N++   A+
Sbjct:   61 WVCAEIRDGLKLWLDLADHGVSLGCLRGAWEPAETDFILTVLEPGDGFIDVGANIGWFSILAAQAVGPQGRVHAFEPRADLSRRLRQSVADNGFDERCRIEAIALGAEEGAIELAWAPDERNPGHSFLVPGA-MPEGAVSLGR----VPVRPLDALGIEGPVRLIKIDVEGAEPLVLRGAQALIARDRPVLLVEVFPHWLSRVSGTTAEALLTQLREWGYRLFHLGESGIGRELHAGDDGTEPGGPDYFNLVALSAA 312          
BLAST of mRNA_P-wetherbeei_contig1713.2.1 vs. uniprot
Match: UPI00123E30FD (FkbM family methyltransferase n=1 Tax=Sphingobium limneticum TaxID=1007511 RepID=UPI00123E30FD)

HSP 1 Score: 166 bits (419), Expect = 5.200e-46
Identity = 94/255 (36.86%), Postives = 137/255 (53.73%), Query Frame = 1
Query:    7 ETWAMIELPGSLKLWIDLGDKYVSLGCLAGAYERDETTFILNTVKQGQTFVDIGANIGWFAVQAAKNVGPGGKVIAIEPRAVTGKYLAQSLQANGFTDCAEVHHCAVGAEAGRFNIAWDGKAGNPGGTWSLPDEKMAQDFRDIGHCVESVEVRTLDSIVANRKIDVIKIDIEGAEGLALRGATQTLAQSRPVIMSEMNFSLLPKISGVSAGDFVRWMAQQGYHCHALDAGRIGPALHADNLPGHLL-FINVIFQP 768
            + WA+ E+    +LW+DL D+YVSL CL   +E  ET    + VK G   VD+GANIGW+ +QAA+ +G  G+V   EPR VT  +L +S+  NG       ++ A+     R  I W     NPG TW    +   QD      CV+      LD I+ +R +DV+KID+EGAE   + G  Q + +S P+IMSE+    L K SG++A DF+  M    Y C  +D  + G   +  ++P H    ++V+F P
Sbjct:   82 DLWALGEIDDGFRLWVDLSDRYVSLPCLRNNFEPSETKLWKSIVKPGHAVVDVGANIGWYTMQAARLIGSTGRVSCFEPRPVTYAHLVRSIVENGMQHIVRSYNVALADREERGKIHWRPGDDNPGHTWLGSQDDTGQDVSSTDVCVQ-----ILDDIIDHRHVDVMKIDVEGAEWRVVSGGLQVIQRSMPMIMSEIFPEELKKQSGINASDFISKMLSLNYDCKFID--KDGFLNNITDVPSHNPEILSVLFVP 329          
BLAST of mRNA_P-wetherbeei_contig1713.2.1 vs. uniprot
Match: UPI001E61BE68 (FkbM family methyltransferase n=1 Tax=Roseomonas sp. OT10 TaxID=2897332 RepID=UPI001E61BE68)

HSP 1 Score: 174 bits (441), Expect = 6.290e-46
Identity = 103/252 (40.87%), Postives = 144/252 (57.14%), Query Frame = 1
Query:   13 WAMIELPGSLKLWIDLGDKYVSLGCLAGAYERDETTFILNTVKQGQTFVDIGANIGWFAVQAAKNVGPGGKVIAIEPRAVTGKYLAQSLQANGFTDCAEVHHCAVGAEAGRFNIAWDGKAGNPGGTWSLPDEKMAQDFRDIGHCVESVEVRTLDSIVANRKIDVIKIDIEGAEGLALRGATQTLAQSRPVIMSEMNFSLLPKISGVSAGDFVRWMAQQGYHCHALDAGRIGPALHADN---LPGHLLFINVI 759
            W   E+   L+LW+DL D  VSLGCL G++E  ET FIL  ++ G  F+D+GANIGWF+V AA+ VGP G+V A EPRA     L QS+  NGF D   V   A+GAE G  ++AW     NPG ++ +P   M +    +G     V VR LD++  +  + +IKID+EGAE L LRGA   +A+ RP+++ E+    L ++SG +A   +  +   GY    L    IG  LHA +    PG   + NV+
Sbjct:   85 WVCTEIRDGLRLWLDLADHGVSLGCLRGSWEPAETDFILAVLEPGDGFIDVGANIGWFSVLAAQAVGPRGRVHAFEPRADLAGRLRQSIVDNGFEDRCRVEMIALGAEEGAIDLAWVPDERNPGHSFIVP-RSMPEGAVSLGR----VPVRPLDALGLDGPVRLIKIDVEGAEPLVLRGAQGLIARDRPILLIELFPYWLGRVSGTTADALLTQLRGWGYRIFHLGQSGIGRELHAGDDGTEPGGPEYFNVV 331          
BLAST of mRNA_P-wetherbeei_contig1713.2.1 vs. uniprot
Match: UPI001E5EBC45 (FkbM family methyltransferase n=1 Tax=Roseomonas sp. OT10 TaxID=2897332 RepID=UPI001E5EBC45)

HSP 1 Score: 172 bits (437), Expect = 2.460e-45
Identity = 102/252 (40.48%), Postives = 144/252 (57.14%), Query Frame = 1
Query:   13 WAMIELPGSLKLWIDLGDKYVSLGCLAGAYERDETTFILNTVKQGQTFVDIGANIGWFAVQAAKNVGPGGKVIAIEPRAVTGKYLAQSLQANGFTDCAEVHHCAVGAEAGRFNIAWDGKAGNPGGTWSLPDEKMAQDFRDIGHCVESVEVRTLDSIVANRKIDVIKIDIEGAEGLALRGATQTLAQSRPVIMSEMNFSLLPKISGVSAGDFVRWMAQQGYHCHALDAGRIGPALHADN---LPGHLLFINVI 759
            W   E+   L+LW+DL D  VSLGCL G++E  ET FIL  ++ G  F+D+GA+IGWF+V AA+ VGP G+V A EPRA     L QS+  NGF D   V   A+GAE G  ++AW     NPG ++ +P   M +    +G     V VR LD++  +  + +IKID+EGAE L LRGA   +A+ RP+++ E+    L ++SG +A   +  +   GY    L    IG  LHA +    PG   + NV+
Sbjct:   61 WVCTEIRDGLRLWLDLADHGVSLGCLRGSWEPAETDFILAVLEPGDGFIDVGADIGWFSVLAAQAVGPRGRVHAFEPRADLAGRLRQSIADNGFEDRCRVEMIALGAEEGAIDLAWVPDERNPGHSFIVP-RSMPEGAVSLGR----VPVRPLDALGLDGPVRLIKIDVEGAEPLVLRGAQGLIARDRPILLIELFPYWLGRVSGTTADALLTQLRGWGYRIFHLGQSGIGRELHAGDDGTEPGGPEYFNVV 307          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1713.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TX97_9PROT4.210e-12968.87Methyltransf_21 domain-containing protein (Fragmen... [more]
UPI00156983499.270e-6845.31FkbM family methyltransferase n=1 Tax=Ensifer adha... [more]
A0A838XK19_9HYPH8.430e-5040.47FkbM family methyltransferase n=1 Tax=Stappia taiw... [more]
A0A7L5ZAJ3_9CAUL4.100e-4939.60FkbM family methyltransferase n=1 Tax=Brevundimona... [more]
A0A2D5FLG4_9GAMM1.310e-4736.80Methyltransf_21 domain-containing protein n=2 Tax=... [more]
UPI001FE97A455.550e-4740.08FkbM family methyltransferase n=1 Tax=Roseomonas t... [more]
UPI001BA492F28.290e-4740.08FkbM family methyltransferase n=1 Tax=Roseomonas t... [more]
UPI00123E30FD5.200e-4636.86FkbM family methyltransferase n=1 Tax=Sphingobium ... [more]
UPI001E61BE686.290e-4640.87FkbM family methyltransferase n=1 Tax=Roseomonas s... [more]
UPI001E5EBC452.460e-4540.48FkbM family methyltransferase n=1 Tax=Roseomonas s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1713contigP-wetherbeei_contig1713:561..1340 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1502852.FG94_04693
PFAMsMethyltransf_21
Model size780
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.31e-35
EggNOG OGsCOG2242@1|root,COG2242@2|Bacteria,1QXYT@1224|Proteobacteria,2WI5F@28216|Betaproteobacteria
DescriptionMethyltransferase FkbM domain
Cds size762
COG categoryH
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186108.8010302-CDS-P-wetherbeei_contig1713:560..13221683186108.8010302-CDS-P-wetherbeei_contig1713:560..1322Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1713 561..1322 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186108.8101895-UTR-P-wetherbeei_contig1713:1322..13401683186108.8101895-UTR-P-wetherbeei_contig1713:1322..1340Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1713 1323..1340 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1713.2.1prot_P-wetherbeei_contig1713.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1713 561..1322 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1713.2.1

>prot_P-wetherbeei_contig1713.2.1 ID=prot_P-wetherbeei_contig1713.2.1|Name=mRNA_P-wetherbeei_contig1713.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=254bp
MIELPGSLKLWIDLGDKYVSLGCLAGAYERDETTFILNTVKQGQTFVDIG
ANIGWFAVQAAKNVGPGGKVIAIEPRAVTGKYLAQSLQANGFTDCAEVHH
CAVGAEAGRFNIAWDGKAGNPGGTWSLPDEKMAQDFRDIGHCVESVEVRT
LDSIVANRKIDVIKIDIEGAEGLALRGATQTLAQSRPVIMSEMNFSLLPK
ISGVSAGDFVRWMAQQGYHCHALDAGRIGPALHADNLPGHLLFINVIFQP
ASK*
back to top

mRNA from alignment at P-wetherbeei_contig1713:561..1340-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1713.2.1 ID=mRNA_P-wetherbeei_contig1713.2.1|Name=mRNA_P-wetherbeei_contig1713.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig1713:561..1340- (Phaeothamnion wetherbeei SAG_119_79)
CCACCGGAAACCTGGGCCATGATTGAATTACCCGGCAGCCTGAAACTGTG GATAGACCTTGGGGATAAGTACGTCTCCCTGGGATGCCTTGCCGGCGCAT ATGAGAGAGATGAGACCACGTTCATTCTGAACACAGTGAAGCAGGGGCAG ACCTTTGTCGATATAGGCGCCAACATTGGATGGTTTGCGGTGCAGGCTGC AAAAAATGTAGGGCCGGGCGGCAAGGTGATCGCCATTGAACCCCGCGCAG TGACGGGTAAATATCTGGCACAATCCCTTCAGGCAAATGGATTTACTGAC TGTGCCGAAGTGCATCACTGCGCTGTTGGCGCTGAAGCTGGGCGCTTTAA TATTGCATGGGATGGCAAAGCAGGAAATCCAGGCGGCACCTGGTCTCTTC CAGATGAAAAAATGGCGCAGGATTTTCGCGACATCGGACACTGCGTGGAA AGTGTCGAAGTCAGAACGCTGGACAGCATTGTGGCCAATCGCAAGATCGA TGTAATCAAAATCGATATAGAGGGCGCTGAGGGCTTGGCGCTGCGCGGCG CCACGCAAACCCTGGCGCAATCCCGGCCTGTCATTATGTCGGAAATGAAT TTTTCGCTGCTGCCAAAAATTTCCGGCGTCTCGGCCGGCGACTTTGTCCG CTGGATGGCGCAACAGGGGTATCATTGCCATGCGCTTGACGCGGGCAGGA TCGGCCCCGCATTGCATGCGGACAATCTGCCCGGACATCTGCTGTTTATC AACGTCATATTTCAGCCTGCATCAAAATAA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1713:561..1340-

>mRNA_P-wetherbeei_contig1713.2.1 ID=mRNA_P-wetherbeei_contig1713.2.1|Name=mRNA_P-wetherbeei_contig1713.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig1713:561..1340- (Phaeothamnion wetherbeei SAG_119_79)
ATGATTGAATTACCCGGCAGCCTGAAACTGTGGATAGACCTTGGGGATAA
GTACGTCTCCCTGGGATGCCTTGCCGGCGCATATGAGAGAGATGAGACCA
CGTTCATTCTGAACACAGTGAAGCAGGGGCAGACCTTTGTCGATATAGGC
GCCAACATTGGATGGTTTGCGGTGCAGGCTGCAAAAAATGTAGGGCCGGG
CGGCAAGGTGATCGCCATTGAACCCCGCGCAGTGACGGGTAAATATCTGG
CACAATCCCTTCAGGCAAATGGATTTACTGACTGTGCCGAAGTGCATCAC
TGCGCTGTTGGCGCTGAAGCTGGGCGCTTTAATATTGCATGGGATGGCAA
AGCAGGAAATCCAGGCGGCACCTGGTCTCTTCCAGATGAAAAAATGGCGC
AGGATTTTCGCGACATCGGACACTGCGTGGAAAGTGTCGAAGTCAGAACG
CTGGACAGCATTGTGGCCAATCGCAAGATCGATGTAATCAAAATCGATAT
AGAGGGCGCTGAGGGCTTGGCGCTGCGCGGCGCCACGCAAACCCTGGCGC
AATCCCGGCCTGTCATTATGTCGGAAATGAATTTTTCGCTGCTGCCAAAA
ATTTCCGGCGTCTCGGCCGGCGACTTTGTCCGCTGGATGGCGCAACAGGG
GTATCATTGCCATGCGCTTGACGCGGGCAGGATCGGCCCCGCATTGCATG
CGGACAATCTGCCCGGACATCTGCTGTTTATCAACGTCATATTTCAGCCT
GCATCAAAATAA
back to top