mRNA_P-wetherbeei_contig17072.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17072.1.1
Unique NamemRNA_P-wetherbeei_contig17072.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17072.1.1 vs. uniprot
Match: A0A258JF43_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium sp. 35-63-5 TaxID=1970326 RepID=A0A258JF43_9BRAD)

HSP 1 Score: 470 bits (1209), Expect = 6.050e-165
Identity = 237/304 (77.96%), Postives = 261/304 (85.86%), Query Frame = 1
Query:   22 PIKIVMGGYGPATTGFSKSLKFIGDRLEAEFGGRVAISYTFNIMDHGHKSEDILTLVESGEITLGYQSSSYLTDRVPELGFVDLPFLFSNNAQARAAMDGEFGRHLAERIEARIGYRILGWFENGFRHISNRLRPIHWPADMKGMKIRVLPSEIQRRTFELLGAQAMRMDLTDAIAIIKAGTLDAQENPLANTVTYGVHNFHKFHTLSSHFYISRPVFLHRASFDAWPTDLQNAMRKAVTDAVAYQRTLAVEENTQSRQAIEAAGCEIVELNAPEHDAFAAAVQPLRDEAREMYGAAMFGMVPK 933
            PI+I MGGYGP  TGFSK+LK IG+RLEAEFG RV I Y +NIMD G K+EDIL LVE G ++LGYQSSSYLTDRVPELGFVDLPFLF+NN QARAAMDGE GR+L  + E RIGYRILGWFENGFRHISNRLRPIH PADMKGMKIRVLPSEI RRTF+LLGAQAMRMDLT+AI ++  GTLDAQENPLANTVTYGVH FHK+HTL+SHFYISRP+FLHRA+F+AWP DLQ AM+ AVT+AV +QR LA+EEN QS +AI  AGCE VEL   EH AF AAVQPLRDEAR MYG AMF MVPK
Sbjct:    9 PIQIRMGGYGPPATGFSKALKLIGNRLEAEFGDRVDIKYIWNIMDLGFKAEDILWLVEHGLLSLGYQSSSYLTDRVPELGFVDLPFLFANNDQARAAMDGELGRYLTAKTEDRIGYRILGWFENGFRHISNRLRPIHSPADMKGMKIRVLPSEIHRRTFDLLGAQAMRMDLTEAIKMVVDGTLDAQENPLANTVTYGVHKFHKYHTLTSHFYISRPIFLHRAAFEAWPDDLQRAMQAAVTEAVVFQRELAIEENAQSMEAIRKAGCEFVELTPAEHAAFVAAVQPLRDEARGMYGEAMFVMVPK 312          
BLAST of mRNA_P-wetherbeei_contig17072.1.1 vs. uniprot
Match: A0A346A1Q6_9HYPH (Uncharacterized protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A1Q6_9HYPH)

HSP 1 Score: 468 bits (1203), Expect = 4.140e-164
Identity = 231/303 (76.24%), Postives = 261/303 (86.14%), Query Frame = 1
Query:   19 TPIKIVMGGYGPATTGFSKSLKFIGDRLEAEFGGRVAISYTFNIMDHGHKSEDILTLVESGEITLGYQSSSYLTDRVPELGFVDLPFLFSNNAQARAAMDGEFGRHLAERIEARIGYRILGWFENGFRHISNRLRPIHWPADMKGMKIRVLPSEIQRRTFELLGAQAMRMDLTDAIAIIKAGTLDAQENPLANTVTYGVHNFHKFHTLSSHFYISRPVFLHRASFDAWPTDLQNAMRKAVTDAVAYQRTLAVEENTQSRQAIEAAGCEIVELNAPEHDAFAAAVQPLRDEAREMYGAAMFGMV 927
            +PI I MGGYGP TT FSKSL FIGD+L A FG RVA+ Y FNIMDHG+K+EDILTLVE+GE+TLGYQSSSYLTDRVPELGFVDLPFLF++NAQARAAMDG  G++L  +IE R+GYRILGWFENGFRHISN+LRPIH PADMKGM IRVLPS++ +RTFELLGA AMRMDLT+AIA+IKAGTLDAQENPLANTVTYGVHNFHK+HTL+SHFY+SRP+FLHR SF+ WP D+Q+AMRK V DAVAYQR LA+EE   +R+ IEAAGCE+V L A EH AF  AVQPL  EAR  YG  MF MV
Sbjct:    3 SPITIRMGGYGPPTTSFSKSLTFIGDKLRAAFGDRVAVDYVFNIMDHGYKAEDILTLVENGELTLGYQSSSYLTDRVPELGFVDLPFLFADNAQARAAMDGALGQYLVGKIEERVGYRILGWFENGFRHISNKLRPIHTPADMKGMSIRVLPSDVHKRTFELLGAVAMRMDLTEAIAMIKAGTLDAQENPLANTVTYGVHNFHKYHTLTSHFYVSRPIFLHRPSFEGWPRDVQDAMRKLVADAVAYQRKLALEEQDAARRTIEAAGCEVVALTALEHAAFVDAVQPLLAEARSAYGEDMFRMV 305          
BLAST of mRNA_P-wetherbeei_contig17072.1.1 vs. uniprot
Match: A0A537R8P1_9PROT (TRAP transporter substrate-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R8P1_9PROT)

HSP 1 Score: 438 bits (1127), Expect = 2.330e-152
Identity = 217/305 (71.15%), Postives = 254/305 (83.28%), Query Frame = 1
Query:   16 STPIKIVMGGYGPATTGFSKSLKFIGDRLEAEFGGRVAISYTFNIMDHGHKSEDILTLVESGEITLGYQSSSYLTDRVPELGFVDLPFLFSNNAQARAAMDGEFGRHLAERIEARIGYRILGWFENGFRHISNRLRPIHWPADMKGMKIRVLPSEIQRRTFELLGAQAMRMDLTDAIAIIKAGTLDAQENPLANTVTYGVHNFHKFHTLSSHFYISRPVFLHRASFDAWPTDLQNAMRKAVTDAVAYQRTLAVEENTQSRQAIEAAGCEIVELNAPEHDAFAAAVQPLRDEAREMYGAAMFGMVP 930
            S PI+I MGGYGPATTGFS++LK +GD+LE EFG RV++ Y +NIMD G+++EDIL LVE G +TLGYQSSSYLTDRVPELGFVD+PFLFS NAQARAAMDG  G  LA RIE R+ YRILG+FENGFRHISNRLR +  PAD+KGM+IRVLPS++Q+RTFELLGA  MRMDLT+AI +IKAGT+DAQENP ANTVTYGVH FH FHT+++HFY+SRP+F+HR +FDAWP DLQ AMRKAVT AVA QR  AVEE+  +RQAI   GCEI++L   EH AFAAAVQPL  E RE YG  MF ++P
Sbjct:   14 SNPIQIRMGGYGPATTGFSRALKMVGDQLEGEFGDRVSVKYVWNIMDLGYRAEDILWLVEHGLLTLGYQSSSYLTDRVPELGFVDMPFLFSGNAQARAAMDGALGGFLARRIEERVNYRILGYFENGFRHISNRLRRVRTPADIKGMRIRVLPSDVQKRTFELLGAIPMRMDLTEAIEMIKAGTIDAQENPFANTVTYGVHKFHHFHTVTNHFYVSRPIFVHRPTFDAWPKDLQEAMRKAVTGAVAMQREFAVEEDKAARQAIRGQGCEILDLTEDEHAAFAAAVQPLLAEGRETYGQKMFDLLP 318          
BLAST of mRNA_P-wetherbeei_contig17072.1.1 vs. uniprot
Match: A0A537LC44_9PROT (TRAP transporter substrate-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537LC44_9PROT)

HSP 1 Score: 422 bits (1084), Expect = 4.930e-146
Identity = 208/301 (69.10%), Postives = 247/301 (82.06%), Query Frame = 1
Query:   25 IKIVMGGYGPATTGFSKSLKFIGDRLEAEFGGRVAISYTFNIMDHGHKSEDILTLVESGEITLGYQSSSYLTDRVPELGFVDLPFLFSNNAQARAAMDGEFGRHLAERIEARIGYRILGWFENGFRHISNRLRPIHWPADMKGMKIRVLPSEIQRRTFELLGAQAMRMDLTDAIAIIKAGTLDAQENPLANTVTYGVHNFHKFHTLSSHFYISRPVFLHRASFDAWPTDLQNAMRKAVTDAVAYQRTLAVEENTQSRQAIEAAGCEIVELNAPEHDAFAAAVQPLRDEAREMYGAAMFGMV 927
            I+I MGGYGPATTGFS++LKFIG+RL  +FG R+ + Y +NIMD G+++EDIL LVESG +TLGYQSSSYLTDRVPELGFVDLPFLFS N  ARAAMDGE G  LA +IEAR+ YRILGW+ENGFR ISN++R +  PAD+ GM+IRVLPS++Q RTFELLGA  +R DLT+AIA IKAGT+DAQENP ANTVTYGVH FH +H++++HFYISRP+FLHR +FDAWP+DLQNAMR+AV  +V YQR LA EE+  SR+AI   GCEI E+ A EH  FA AVQPL  +AR MYG  MF MV
Sbjct:    5 IQIRMGGYGPATTGFSRALKFIGERLAQQFGDRIVVKYVWNIMDFGYRAEDILWLVESGVLTLGYQSSSYLTDRVPELGFVDLPFLFSQNETARAAMDGELGTFLASKIEARVNYRILGWYENGFRQISNKVRAVRTPADLTGMRIRVLPSDVQARTFELLGAVPLRWDLTEAIAAIKAGTIDAQENPFANTVTYGVHKFHHYHSVTNHFYISRPIFLHRTAFDAWPSDLQNAMREAVAASVEYQRGLAEEEDVASRRAIVDQGCEIAEITADEHALFAKAVQPLWADARTMYGKEMFAMV 305          
BLAST of mRNA_P-wetherbeei_contig17072.1.1 vs. uniprot
Match: A0A1Q7BM80_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BM80_9PROT)

HSP 1 Score: 420 bits (1080), Expect = 1.510e-145
Identity = 205/296 (69.26%), Postives = 246/296 (83.11%), Query Frame = 1
Query:   37 MGGYGPATTGFSKSLKFIGDRLEAEFGGRVAISYTFNIMDHGHKSEDILTLVESGEITLGYQSSSYLTDRVPELGFVDLPFLFSNNAQARAAMDGEFGRHLAERIEARIGYRILGWFENGFRHISNRLRPIHWPADMKGMKIRVLPSEIQRRTFELLGAQAMRMDLTDAIAIIKAGTLDAQENPLANTVTYGVHNFHKFHTLSSHFYISRPVFLHRASFDAWPTDLQNAMRKAVTDAVAYQRTLAVEENTQSRQAIEAAGCEIVELNAPEHDAFAAAVQPLRDEAREMYGAAMFGM 924
            MGGYGP TTGFS++LK IGDRL AEFG R+ + Y +NIMD G+++EDIL LVE G +TLGYQSSSYLTDRVPELG VDLPFLF++   ARAAMDG  G  LA  IE R+ +R+LGWFENGFRHISNR+R +  PAD+ GM+IRVLPS++Q RTFELLGA  M MDLT AIA+I AGT+DAQENPL+NTVTYGVH FH+FHTLS+HFYISRP+FLHR +FD+WP D+Q AMR A+TDA+A+QR L V+E  ++R+AIEA GCEIV L + EHDAFAAAV+PL  EAR M+GAA+F +
Sbjct:    1 MGGYGPPTTGFSRALKRIGDRLAAEFGERIEVKYVWNIMDLGYRAEDILWLVEHGLLTLGYQSSSYLTDRVPELGIVDLPFLFADTRSARAAMDGALGDVLARNIEERVNFRVLGWFENGFRHISNRMREVRTPADLAGMRIRVLPSKVQARTFELLGAVPMPMDLTQAIAMISAGTIDAQENPLSNTVTYGVHKFHRFHTLSNHFYISRPIFLHRPAFDSWPADVQRAMRNAITDAIAFQRELHVQEEKEARKAIEAQGCEIVALTSAEHDAFAAAVEPLVSEARGMFGAALFDL 296          
BLAST of mRNA_P-wetherbeei_contig17072.1.1 vs. uniprot
Match: A0A1Q7BFB4_9PROT (Uncharacterized protein n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BFB4_9PROT)

HSP 1 Score: 415 bits (1067), Expect = 1.650e-143
Identity = 205/296 (69.26%), Postives = 245/296 (82.77%), Query Frame = 1
Query:   37 MGGYGPATTGFSKSLKFIGDRLEAEFGGRVAISYTFNIMDHGHKSEDILTLVESGEITLGYQSSSYLTDRVPELGFVDLPFLFSNNAQARAAMDGEFGRHLAERIEARIGYRILGWFENGFRHISNRLRPIHWPADMKGMKIRVLPSEIQRRTFELLGAQAMRMDLTDAIAIIKAGTLDAQENPLANTVTYGVHNFHKFHTLSSHFYISRPVFLHRASFDAWPTDLQNAMRKAVTDAVAYQRTLAVEENTQSRQAIEAAGCEIVELNAPEHDAFAAAVQPLRDEAREMYGAAMFGM 924
            MGGYGPA+TGFS++LK IGDRL AEFG RV + Y +NIM+ G+++EDIL LVE G +TLGYQSSSYLTDRVP+LG  DLPFLF+    ARAAMDG  G  LA +IE R+ YR+LGWFENGFRHISNR+R +   AD+ G++IRVLPS++Q RTFELLGA  +RMDLT AIA+I AGT+DAQENPL+NTVTYGVH FH+FHTLS+HFYISRP+FLHR +FDAWP DLQ AMR AVT+AVA+QR L V+E   +R+AIEA GCEIVEL A EHDAFAAAV+PL +EAR  +G A+F +
Sbjct:    1 MGGYGPASTGFSRALKSIGDRLTAEFGDRVDVKYVWNIMELGYRAEDILWLVEHGLLTLGYQSSSYLTDRVPDLGIADLPFLFARTQAARAAMDGALGDLLARKIEERLNYRVLGWFENGFRHISNRVREVRASADLAGLRIRVLPSKVQARTFELLGAVPIRMDLTQAIAMIAAGTIDAQENPLSNTVTYGVHKFHRFHTLSNHFYISRPIFLHRTAFDAWPADLQRAMRSAVTEAVAFQRGLHVQEEEDARKAIEAQGCEIVELGAAEHDAFAAAVEPLLNEARATFGRALFDL 296          
BLAST of mRNA_P-wetherbeei_contig17072.1.1 vs. uniprot
Match: A0A363TPQ5_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TPQ5_9BRAD)

HSP 1 Score: 415 bits (1067), Expect = 3.110e-143
Identity = 209/305 (68.52%), Postives = 245/305 (80.33%), Query Frame = 1
Query:   16 STPIKIVMGGYGPATTGFSKSLKFIGDRLEAEFGGRVAISYTFNIMDHGHKSEDILTLVESGEITLGYQSSSYLTDRVPELGFVDLPFLFSNNAQARAAMDGEFGRHLAERIEARIGYRILGWFENGFRHISNRLRPIHWPADMKGMKIRVLPSEIQRRTFELLGAQAMRMDLTDAIAIIKAGTLDAQENPLANTVTYGVHNFHKFHTLSSHFYISRPVFLHRASFDAWPTDLQNAMRKAVTDAVAYQRTLAVEENTQSRQAIEAAGCEIVELNAPEHDAFAAAVQPLRDEAREMYGAAMFGMVP 930
            S PI I MGGYGPATT FS +LK IG+RL  EFG RVAI Y +NIMD G+++EDIL LVESG +TLGYQSSSYLTDR+PELG VDLPF+FS    ARAAMDG  G  LA  IEAR G+ ILGWFENGFRH+SNRLRP+  PAD+ GM+IRVLPS IQ RTFELLGA+ +R DLT+A+A I AGT+DAQENPLANTVTYG H FH+FHTL++HFY+SRPVFL+R +FDAWP DL+ AMR AV +AVAYQR LA+ E  ++R+AIE  GCEIVEL   EH AFAAAV+PL +EAR  Y   +F ++P
Sbjct:   12 SQPIHIRMGGYGPATTCFSLALKRIGERLATEFGDRVAIKYVWNIMDFGYRAEDILWLVESGVLTLGYQSSSYLTDRIPELGIVDLPFVFSQKDAARAAMDGALGATLARAIEARSGFAILGWFENGFRHVSNRLRPVRAPADLAGMRIRVLPSRIQARTFELLGAEPLRWDLTEALAAIAAGTIDAQENPLANTVTYGAHKFHRFHTLTNHFYVSRPVFLNRPAFDAWPEDLKAAMRAAVAEAVAYQRDLAIAEEQEARRAIEREGCEIVELTPDEHAAFAAAVRPLYEEARRSYEKKLFDLLP 316          
BLAST of mRNA_P-wetherbeei_contig17072.1.1 vs. uniprot
Match: A0A3N5MFW2_9HYPH (TRAP transporter substrate-binding protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5MFW2_9HYPH)

HSP 1 Score: 413 bits (1061), Expect = 2.130e-142
Identity = 206/302 (68.21%), Postives = 244/302 (80.79%), Query Frame = 1
Query:   22 PIKIVMGGYGPATTGFSKSLKFIGDRLEAEFGGRVAISYTFNIMDHGHKSEDILTLVESGEITLGYQSSSYLTDRVPELGFVDLPFLFSNNAQARAAMDGEFGRHLAERIEARIGYRILGWFENGFRHISNRLRPIHWPADMKGMKIRVLPSEIQRRTFELLGAQAMRMDLTDAIAIIKAGTLDAQENPLANTVTYGVHNFHKFHTLSSHFYISRPVFLHRASFDAWPTDLQNAMRKAVTDAVAYQRTLAVEENTQSRQAIEAAGCEIVELNAPEHDAFAAAVQPLRDEAREMYGAAMFGMV 927
            PI+I MGGYGPATTGFS++LK +GDRLEAEFG RV + Y +NIMD G+++EDIL LVE G ++LGYQSSSYLTDRVPELGFVDLPFLF +NAQARAA+DG  G HLA  IE R+ YRILG+FENGFRHISNRLR +  P D+K M+IRVLPS++Q+RTFELLGA  MRMDLT+AI  I+AGT+DAQENP ANT TYGVH FH FHT++SHFY+SRP+F+HR +FDAWP DLQ AMR+A   AVA QR LAVEE+  +RQ I A GCEIV+L   E  AF AAVQPL  + R  YG  +F ++
Sbjct:    4 PIEIRMGGYGPATTGFSRALKLMGDRLEAEFGARVCVKYVWNIMDLGYRAEDILWLVEHGLLSLGYQSSSYLTDRVPELGFVDLPFLFDDNAQARAAIDGPLGAHLAGLIEERVNYRILGYFENGFRHISNRLRCVRKPTDLKAMRIRVLPSDVQKRTFELLGAAPMRMDLTEAIKKIQAGTIDAQENPFANTATYGVHKFHYFHTVTSHFYVSRPIFVHRPTFDAWPKDLQEAMRRAAEAAVAMQRGLAVEEDKAARQTILAQGCEIVDLTKEERAAFVAAVQPLVSDGRVTYGRKLFDLL 305          
BLAST of mRNA_P-wetherbeei_contig17072.1.1 vs. uniprot
Match: A0A537UGH3_9PROT (TRAP transporter substrate-binding protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537UGH3_9PROT)

HSP 1 Score: 412 bits (1060), Expect = 2.540e-142
Identity = 206/301 (68.44%), Postives = 243/301 (80.73%), Query Frame = 1
Query:   22 PIKIVMGGYGPATTGFSKSLKFIGDRLEAEFGGRVAISYTFNIMDHGHKSEDILTLVESGEITLGYQSSSYLTDRVPELGFVDLPFLFSNNAQARAAMDGEFGRHLAERIEARIGYRILGWFENGFRHISNRLRPIHWPADMKGMKIRVLPSEIQRRTFELLGAQAMRMDLTDAIAIIKAGTLDAQENPLANTVTYGVHNFHKFHTLSSHFYISRPVFLHRASFDAWPTDLQNAMRKAVTDAVAYQRTLAVEENTQSRQAIEAAGCEIVELNAPEHDAFAAAVQPLRDEAREMYGAAMFGM 924
            PI I MGGYGP TTGFS++LK IGD+L+AEFG  V I Y +NIMD G+++EDIL LVE G +TLGYQSSSYLTDRVPELG VDLPFLF     ARAAMDG  G  LA +IE R+ +R+LGWFENGFRHISNRLR +  PA + G +IRVLPS++Q RTFELLGA  M MDLT AIA+I AGT+DAQENPL+NTVTYGVH FH+FHTLS+HFY+SRP+FLHRASFD WP DL+ AM+KA+ DAVA+QR L V+E  ++R+ IEA GCEIVEL A EHDAFAAAV PL  EAR  +G+ + G+
Sbjct:    4 PIAIRMGGYGPPTTGFSRALKRIGDQLQAEFGSGVEIKYVWNIMDLGYRAEDILWLVEHGLLTLGYQSSSYLTDRVPELGIVDLPFLFVRMQFARAAMDGALGDVLARKIEERVNFRVLGWFENGFRHISNRLREVRAPAHLAGQRIRVLPSKVQARTFELLGAVPMPMDLTQAIAMITAGTIDAQENPLSNTVTYGVHKFHRFHTLSNHFYVSRPIFLHRASFDGWPADLRRAMQKAIRDAVAFQRDLHVQEEEEARKVIEAQGCEIVELTAAEHDAFAAAVMPLITEARATFGSGLLGL 304          
BLAST of mRNA_P-wetherbeei_contig17072.1.1 vs. uniprot
Match: A0A537SQ19_9PROT (TRAP transporter substrate-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SQ19_9PROT)

HSP 1 Score: 410 bits (1055), Expect = 1.460e-141
Identity = 203/302 (67.22%), Postives = 246/302 (81.46%), Query Frame = 1
Query:   22 PIKIVMGGYGPATTGFSKSLKFIGDRLEAEFGGRVAISYTFNIMDHGHKSEDILTLVESGEITLGYQSSSYLTDRVPELGFVDLPFLFSNNAQARAAMDGEFGRHLAERIEARIGYRILGWFENGFRHISNRLRPIHWPADMKGMKIRVLPSEIQRRTFELLGAQAMRMDLTDAIAIIKAGTLDAQENPLANTVTYGVHNFHKFHTLSSHFYISRPVFLHRASFDAWPTDLQNAMRKAVTDAVAYQRTLAVEENTQSRQAIEAAGCEIVELNAPEHDAFAAAVQPLRDEAREMYGAAMFGMV 927
            PI+I MGGY P T+GFS++LK IGDRL  EFG RV + Y +NIM+ G+++EDIL LVE+G +TLGYQSSSYLTDRVP+LG VDLPFLF++   ARAAMDG  G  LA  IE R  +RILGWFENGFRHISNR+RP+  PAD+ G+++RVLPS++Q RTFELLGA  M MDLT AIA+I AG +DAQENPL+NTVTYGVH FH+FHTLS+HFYISRP+FLHR +F++WP DLQ AMR A+ DAVA+QR L VEE  Q+RQAI A GCEIVEL A +HDAFAAAV PL  EAR+++G A+  ++
Sbjct:    4 PIRIRMGGYAPPTSGFSRALKRIGDRLADEFGERVEVKYVWNIMEFGYRAEDILWLVENGLLTLGYQSSSYLTDRVPDLGVVDLPFLFASAQSARAAMDGALGDVLARGIEERTNFRILGWFENGFRHISNRIRPVRAPADLAGLRMRVLPSKVQARTFELLGAVPMPMDLTQAIALITAGDIDAQENPLSNTVTYGVHKFHRFHTLSNHFYISRPIFLHRTAFESWPADLQRAMRSAIADAVAFQRELHVEEEEQARQAIAAQGCEIVELTAADHDAFAAAVAPLLREARQIFGPALLDLM 305          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17072.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A258JF43_9BRAD6.050e-16577.96Uncharacterized protein n=1 Tax=Bradyrhizobium sp.... [more]
A0A346A1Q6_9HYPH4.140e-16476.24Uncharacterized protein n=1 Tax=Pseudolabrys taiwa... [more]
A0A537R8P1_9PROT2.330e-15271.15TRAP transporter substrate-binding protein n=1 Tax... [more]
A0A537LC44_9PROT4.930e-14669.10TRAP transporter substrate-binding protein n=1 Tax... [more]
A0A1Q7BM80_9PROT1.510e-14569.26Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A1Q7BFB4_9PROT1.650e-14369.26Uncharacterized protein n=2 Tax=unclassified Alpha... [more]
A0A363TPQ5_9BRAD3.110e-14368.52Uncharacterized protein n=1 Tax=Bradyrhizobiaceae ... [more]
A0A3N5MFW2_9HYPH2.130e-14268.21TRAP transporter substrate-binding protein n=1 Tax... [more]
A0A537UGH3_9PROT2.540e-14268.44TRAP transporter substrate-binding protein n=2 Tax... [more]
A0A537SQ19_9PROT1.460e-14167.22TRAP transporter substrate-binding protein n=1 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17072contigP-wetherbeei_contig17072:438..1376 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1118054.CAGW01000017_gene4464
PFAMsDctP
Model size939
Max annot lvl91061|Bacilli
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.85e-43
EggNOG OGsCOG1638@1|root,COG1638@2|Bacteria,1TP2G@1239|Firmicutes,4HBBZ@91061|Bacilli
DescriptionBacterial extracellular solute-binding protein, family 7
Cds size939
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186106.8454814-CDS-P-wetherbeei_contig17072:437..13761683186106.8454814-CDS-P-wetherbeei_contig17072:437..1376Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17072 438..1376 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17072.1.1prot_P-wetherbeei_contig17072.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17072 438..1376 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17072.1.1

>prot_P-wetherbeei_contig17072.1.1 ID=prot_P-wetherbeei_contig17072.1.1|Name=mRNA_P-wetherbeei_contig17072.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=313bp
MSGNTSTPIKIVMGGYGPATTGFSKSLKFIGDRLEAEFGGRVAISYTFNI
MDHGHKSEDILTLVESGEITLGYQSSSYLTDRVPELGFVDLPFLFSNNAQ
ARAAMDGEFGRHLAERIEARIGYRILGWFENGFRHISNRLRPIHWPADMK
GMKIRVLPSEIQRRTFELLGAQAMRMDLTDAIAIIKAGTLDAQENPLANT
VTYGVHNFHKFHTLSSHFYISRPVFLHRASFDAWPTDLQNAMRKAVTDAV
AYQRTLAVEENTQSRQAIEAAGCEIVELNAPEHDAFAAAVQPLRDEAREM
YGAAMFGMVPKA*
back to top

mRNA from alignment at P-wetherbeei_contig17072:438..1376-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17072.1.1 ID=mRNA_P-wetherbeei_contig17072.1.1|Name=mRNA_P-wetherbeei_contig17072.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig17072:438..1376- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGGTAACACTTCGACGCCGATCAAAATCGTCATGGGCGGATATGG TCCGGCGACGACCGGCTTCAGCAAGTCGCTCAAATTCATCGGCGACAGGC TTGAAGCCGAGTTCGGCGGCCGCGTCGCGATCTCCTATACCTTCAACATC ATGGACCACGGCCACAAGTCCGAGGACATTCTCACTTTGGTCGAGAGCGG CGAGATCACGCTCGGCTATCAGTCGTCAAGTTATCTCACCGACCGCGTGC CCGAGCTGGGTTTCGTCGACCTTCCGTTCCTGTTTTCCAATAACGCGCAG GCGCGCGCGGCGATGGACGGAGAATTCGGCCGTCACCTGGCCGAACGGAT CGAGGCGCGCATCGGCTATCGCATCCTCGGCTGGTTCGAGAACGGCTTCC GGCACATCTCCAACCGGCTGCGGCCGATCCATTGGCCCGCCGACATGAAG GGCATGAAGATCAGGGTGCTGCCGAGCGAAATCCAGCGCCGCACCTTCGA GCTGCTCGGCGCGCAGGCGATGCGCATGGACCTGACCGATGCGATCGCCA TAATCAAGGCCGGCACCCTGGACGCGCAGGAAAATCCGCTGGCCAATACG GTGACCTACGGCGTGCACAACTTCCACAAGTTTCACACGCTGTCGTCGCA CTTCTACATTTCGCGGCCGGTCTTCCTGCACCGCGCCTCGTTCGACGCCT GGCCGACCGATTTGCAGAATGCGATGCGCAAGGCGGTGACGGACGCGGTC GCCTATCAGCGCACGCTCGCGGTTGAGGAAAACACGCAGTCGCGCCAGGC GATCGAGGCGGCCGGCTGCGAAATCGTCGAACTCAACGCGCCGGAGCACG ACGCCTTCGCCGCCGCGGTGCAGCCGTTGCGCGACGAAGCGCGTGAGATG TACGGCGCGGCGATGTTCGGGATGGTGCCGAAGGCCTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig17072:438..1376-

>mRNA_P-wetherbeei_contig17072.1.1 ID=mRNA_P-wetherbeei_contig17072.1.1|Name=mRNA_P-wetherbeei_contig17072.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig17072:438..1376- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGGTAACACTTCGACGCCGATCAAAATCGTCATGGGCGGATATGG
TCCGGCGACGACCGGCTTCAGCAAGTCGCTCAAATTCATCGGCGACAGGC
TTGAAGCCGAGTTCGGCGGCCGCGTCGCGATCTCCTATACCTTCAACATC
ATGGACCACGGCCACAAGTCCGAGGACATTCTCACTTTGGTCGAGAGCGG
CGAGATCACGCTCGGCTATCAGTCGTCAAGTTATCTCACCGACCGCGTGC
CCGAGCTGGGTTTCGTCGACCTTCCGTTCCTGTTTTCCAATAACGCGCAG
GCGCGCGCGGCGATGGACGGAGAATTCGGCCGTCACCTGGCCGAACGGAT
CGAGGCGCGCATCGGCTATCGCATCCTCGGCTGGTTCGAGAACGGCTTCC
GGCACATCTCCAACCGGCTGCGGCCGATCCATTGGCCCGCCGACATGAAG
GGCATGAAGATCAGGGTGCTGCCGAGCGAAATCCAGCGCCGCACCTTCGA
GCTGCTCGGCGCGCAGGCGATGCGCATGGACCTGACCGATGCGATCGCCA
TAATCAAGGCCGGCACCCTGGACGCGCAGGAAAATCCGCTGGCCAATACG
GTGACCTACGGCGTGCACAACTTCCACAAGTTTCACACGCTGTCGTCGCA
CTTCTACATTTCGCGGCCGGTCTTCCTGCACCGCGCCTCGTTCGACGCCT
GGCCGACCGATTTGCAGAATGCGATGCGCAAGGCGGTGACGGACGCGGTC
GCCTATCAGCGCACGCTCGCGGTTGAGGAAAACACGCAGTCGCGCCAGGC
GATCGAGGCGGCCGGCTGCGAAATCGTCGAACTCAACGCGCCGGAGCACG
ACGCCTTCGCCGCCGCGGTGCAGCCGTTGCGCGACGAAGCGCGTGAGATG
TACGGCGCGGCGATGTTCGGGATGGTGCCGAAGGCCTAG
back to top