mRNA_P-wetherbeei_contig1703.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1703.4.1 vs. uniprot
Match: A0A6V1N8Z5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N8Z5_HETAK) HSP 1 Score: 107 bits (267), Expect = 1.010e-27 Identity = 49/94 (52.13%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 4 LLNWKYMDHTMRVRTSTYLFTLKDKLRERHGRVEDLRICHSHYAEANEMADDQQTLADYGIEGAPRGAAPVV-VSLYYDFLPANRGEPLLLVWN 282
LLNW YM+ RV+TST++F +K+ L+ERHGR+E+L IC ++EANEMAD+ +TL DYG++GAP P ++YDF ++ +PLLLVWN
Sbjct: 54 LLNWSYMNTEYRVKTSTHIFRIKNYLKERHGRIEELIICKDSFSEANEMADEMKTLEDYGVKGAPEDHEPPARCPIFYDFKQSDHHDPLLLVWN 147
BLAST of mRNA_P-wetherbeei_contig1703.4.1 vs. uniprot
Match: A0A836CBV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBV7_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.510e-25 Identity = 45/90 (50.00%), Postives = 65/90 (72.22%), Query Frame = 1
Query: 1 QLLNWKYMDHTMRVRTSTYLFTLKDKLRERHGRVEDLRICHSHYAEANEMADDQQTLADYGIEGAPRGAAPVVVSLYYDFLPANRGEPLL 270
+LLNW+YM+H VRTST++FT++ L ERHG V+DL ICH+ + +ANEMAD+ +TLA+Y I+G + P+ + ++YDF P N LL
Sbjct: 15 KLLNWRYMNHKQAVRTSTHVFTIRRLLAERHGNVKDLVICHTAFTQANEMADEMKTLAEYSIKGKRKDEEPLSIIIFYDFRPNNTDALLL 104
BLAST of mRNA_P-wetherbeei_contig1703.4.1 vs. uniprot
Match: A0A3R7HL40_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HL40_9STRA) HSP 1 Score: 101 bits (251), Expect = 5.910e-25 Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 1 QLLNWKYMDHTMRVRTSTYLFTLKDKLRERHGRVEDLRICHSHYAEANEMADDQQTLADYGIEGAPRGAAPVVVSLYYDFLPANRGEPLLL 273
+LLNW Y++ R +TST LF +K +++++HG + DL+IC H++EANE+ D TLA++GIEGAP G VV ++YDF P PLLL
Sbjct: 83 RLLNWSYLNFKFRTKTSTRLFAVKQQIQKQHGPISDLKICKGHFSEANELLQDMNTLAEFGIEGAPEGEPEVVCLVHYDFKPEQHDNPLLL 173
BLAST of mRNA_P-wetherbeei_contig1703.4.1 vs. uniprot
Match: A0A8K1CF99_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CF99_PYTOL) HSP 1 Score: 100 bits (250), Expect = 1.030e-22 Identity = 46/91 (50.55%), Postives = 63/91 (69.23%), Query Frame = 1
Query: 1 QLLNWKYMDHTMRVRTSTYLFTLKDKLRERHGRVEDLRICHSHYAEANEMADDQQTLADYGIEGAPRGAAPVVVSLYYDFLPANRGEPLLL 273
+LLNW Y++ +RV+T+T LF +K ++ + HG + DL++C ++AEANEM D TLADYGIEGAP A VV ++YDF P PLLL
Sbjct: 573 RLLNWSYLNFKIRVKTTTRLFAVKQQIHKHHGPITDLKLCKGNFAEANEMHQDLDTLADYGIEGAPEHEAEVVCVIHYDFKPQQHDNPLLL 663
BLAST of mRNA_P-wetherbeei_contig1703.4.1 vs. uniprot
Match: A0A7S2WAM6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAM6_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.530e-21 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 1 QLLNWKYMDHTMRVRTSTYLFTLKDKLRERHGRVEDLRICHSHYAEANEMADDQQTLADYGIEGAPRGAAPVVVSLYYDFLPANRGEPLLLVWN 282
+L+NW +M+ T+RV+TS LF +KD+++ RHG V++L +C ++E NE+ DD TL D G GA PV ++YYDF + +PLLLV N
Sbjct: 49 KLMNWDFMNSTLRVKTSMRLFQIKDEIQRRHGLVKNLVLCKGVFSEVNELKDDMATLEDLGFPGAMEDEKPVSATIYYDFKAQDHDDPLLLVRN 142
BLAST of mRNA_P-wetherbeei_contig1703.4.1 vs. uniprot
Match: A0A7S1C5U2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5U2_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 6.190e-21 Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 1
Query: 1 QLLNWKYMDHTMRVRTSTYLFTLKDKLRERHGRVEDLRICHSHYAEANEMADDQQTLADYGIEGAPRGAAPVVVSLYYDFLPANRGEPLLLV 276
+L+NW Y++H +RVRT T LF++K +L ERHGR+ +LR+ H E+AD+ QTL G+ GA + PV +L YDF P + +PLLLV
Sbjct: 58 RLVNWAYLNHELRVRTDTPLFSIKKRLVERHGRMSELRLYKEHVTPETELADEMQTLEAAGVPGAAKDDPPVRFALVYDFKPYDSADPLLLV 149
BLAST of mRNA_P-wetherbeei_contig1703.4.1 vs. uniprot
Match: A0A7S2V1Q2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Q2_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.150e-20 Identity = 40/66 (60.61%), Postives = 52/66 (78.79%), Query Frame = 1
Query: 4 LLNWKYMDHTMRVRTSTYLFTLKDKLRERHGRVEDLRICHSHYAEANEMADDQQTLADYGIEGAPR 201
L+NWKYM+ RV+T+T++FTLK+ LRE+HGRV DL +C + E NEM D+ QTLADYG+EGA R
Sbjct: 49 LMNWKYMNFQHRVKTTTHIFTLKNMLREKHGRVSDLVLCKDSFREENEMNDEMQTLADYGVEGAGR 114
BLAST of mRNA_P-wetherbeei_contig1703.4.1 vs. uniprot
Match: A0A482UWT5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UWT5_9ARCH) HSP 1 Score: 74.7 bits (182), Expect = 2.020e-15 Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 22 MDHTMRVRTSTYLFTLKDKLRERHGRVEDLRICHSHYAEANEMADDQQTLADYGIEGAPRGAAPVV------------VSLYYDFLPANRGEPLLL 273
M+ +M+ R +T +FT+K LRERHGR++DL++C + ++NE+ D+ TL + G++G P G A V V +YDF P N +P+LL
Sbjct: 1 MNFSMKFRENTNVFTIKKLLRERHGRIDDLKLCFHSFTDSNEVLDEMLTLLECGLKGHPVGHAVTVEEKELEEKSIPIVQCFYDFKPTNYSDPVLL 96
BLAST of mRNA_P-wetherbeei_contig1703.4.1 vs. uniprot
Match: A0A7S0M4X8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M4X8_9CRYP) HSP 1 Score: 59.3 bits (142), Expect = 4.530e-9 Identity = 32/92 (34.78%), Postives = 50/92 (54.35%), Query Frame = 1
Query: 1 QLLNWKYMDHTMRVRTSTYLFTLKDKLRERHG-RVEDLRICHSHYAEANEMADDQQTLADYGIEGAPRGAAPVVVSLYYDFLPANRGEPLLL 273
+L+ W Y++ ++ +RTS LFT+ DK+RERHG + D+ + N + D TL D G EG + P ++YD+ + PLLL
Sbjct: 27 KLITWDYLNFSLLMRTSARLFTIVDKIRERHGGSISDILLYRHQVHPQNVLLDTSITLDDAGYEGGSSSSNPKEEIMWYDYQAHSSDCPLLL 118
BLAST of mRNA_P-wetherbeei_contig1703.4.1 vs. uniprot
Match: A0A7S0Z5G1_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z5G1_9CRYP) HSP 1 Score: 50.8 bits (120), Expect = 2.230e-5 Identity = 30/92 (32.61%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 1 QLLNWKYMDHTMRVRTSTYLFTLKDKLRERHG-RVEDLRICHSHYAEANEMADDQQTLADYGIEGAPRGAAPVVVSLYYDFLPANRGEPLLL 273
+L+ W++++ T+ VR ST L+++ DK+R+RHG ++D+ + N + + +TL D G EG R + P ++YD+ + PLLL
Sbjct: 52 KLVTWEHLNFTVVVRNSTRLYSIVDKVRDRHGGSIKDVILYRHQVHPQNILQELGKTLDDVGFEGGSR-SDPKDEVIWYDYQAHSSDCPLLL 142 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1703.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1703.4.1 >prot_P-wetherbeei_contig1703.4.1 ID=prot_P-wetherbeei_contig1703.4.1|Name=mRNA_P-wetherbeei_contig1703.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=93bp MDHTMRVRTSTYLFTLKDKLRERHGRVEDLRICHSHYAEANEMADDQQTLback to top mRNA from alignment at P-wetherbeei_contig1703:4701..5110- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1703.4.1 ID=mRNA_P-wetherbeei_contig1703.4.1|Name=mRNA_P-wetherbeei_contig1703.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=410bp|location=Sequence derived from alignment at P-wetherbeei_contig1703:4701..5110- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1703:4701..5110- >mRNA_P-wetherbeei_contig1703.4.1 ID=mRNA_P-wetherbeei_contig1703.4.1|Name=mRNA_P-wetherbeei_contig1703.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=279bp|location=Sequence derived from alignment at P-wetherbeei_contig1703:4701..5110- (Phaeothamnion wetherbeei SAG_119_79)back to top |